Rorug05G0461300

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
63487236 .. 63487628
393 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0461300.1

Sequence Viewer

Length: 393 bp
ATGGCTATAGCCAAGTCCTATGCCTCATACACCGCCAAGGCTAACCGCACCGACTCAAAAACTCTTCGACTTCACAACGCAATCCACGACTTGTCGTCGGTGCTAGGATTCAACGGTACGGCGGAGCTTCACAGGAGCTGCGTTTTGGGCTCAACTGTGTTAAAGGATCTTGCCAAGTTCGTGGAGTATACTGATGAGACTCTGTTTATGTGGCCGATTCCGCGGCGTGAGAAAATGAGAGCTGAGGAGGAATTGGTTTTTAGGAATATCGGGAATCAGATTCCGGGAGGGGTGTTGAGTTTCATGTTCCGAGATGGCTGCCCGAGTTCCCAGAAGTGGGGGAGTCAAAATTGGTTAAGAGGAGGAGCTGTGGTGGGAGGATTTGGTAGTTGA

Protein Analysis

130

Amino Acids

14.4

Weight (kDa)

9.3

Isoelectric Point (pI)

44.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 188
AccII CGCG 1 cut(s) 223
AciI CCGC 5 cut(s) 33, 46, 122, 221, 223
AclWI GGATC 1 cut(s) 174
AcoI YGGCCR 1 cut(s) 212
AfaI GTAC 1 cut(s) 118
AfiI CCNNNNNNNGG 2 cut(s) 336, 337
AgsI TTSAA 1 cut(s) 112
AhdI GACNNNNNGTC 1 cut(s) 94
AluBI AGCT 4 cut(s) 127, 138, 242, 368
AluI AGCT 4 cut(s) 127, 138, 242, 368
Alw26I GTCTC 1 cut(s) 191
AlwI GGATC 1 cut(s) 174
AlwNI CAGNNNCTG 1 cut(s) 138
Ama87I CYCGRG 1 cut(s) 322
AoxI GGCC 1 cut(s) 212
ApeKI GCWGC 2 cut(s) 138, 318
AsuC2I CCSGG 1 cut(s) 285
AvaI CYCGRG 1 cut(s) 322
BanII GRGCYC 1 cut(s) 152
BbvCI CCTCAGC 1 cut(s) 243
BbvI GCAGC 2 cut(s) 125, 305
BccI CCATC 1 cut(s) 308
BceAI ACGGC 1 cut(s) 135
BcgI CGANNNNNNTGC 2 cut(s) 300, 334
BcnI CCSGG 1 cut(s) 285
BcoDI GTCTC 1 cut(s) 191
BfaI CTAG 1 cut(s) 104
BfmI CTRYAG 1 cut(s) 6
BisI GCNGC 3 cut(s) 139, 224, 319
BlsI GCNGC 3 cut(s) 140, 225, 320
Bme1390I CCNGG 1 cut(s) 285
BmeRI GACNNNNNGTC 1 cut(s) 94
BmeT110I CYCGRG 1 cut(s) 322
BmrFI CCNGG 1 cut(s) 285
Bpu10I CCTNAGC 1 cut(s) 243
BpuMI CCSGG 1 cut(s) 285
BsaJI CCNNGG 2 cut(s) 36, 221
BsaXI ACNNNNNCTCC 4 cut(s) 354, 357, 384, 387
Bsc4I CCNNNNNNNGG 2 cut(s) 336, 337
BseDI CCNNGG 2 cut(s) 36, 221
BseLI CCNNNNNNNGG 2 cut(s) 336, 337
BseMII CTCAG 1 cut(s) 234
BseRI GAGGAG 3 cut(s) 260, 375, 378
BseXI GCAGC 2 cut(s) 125, 305
Bsh1236I CGCG 1 cut(s) 223
BshFI GGCC 1 cut(s) 214
BsiHKCI CYCGRG 1 cut(s) 322
BsiSI CCGG 1 cut(s) 284
BslI CCNNNNNNNGG 2 cut(s) 336, 337
BsmAI GTCTC 1 cut(s) 191
BsnI GGCC 1 cut(s) 214
BsoBI CYCGRG 1 cut(s) 322
Bsp1286I GDGCHC 1 cut(s) 152
Bsp143I GATC 1 cut(s) 166
BspACI CCGC 5 cut(s) 33, 46, 122, 221, 223
BspANI GGCC 1 cut(s) 214
BspCNI CTCAG 1 cut(s) 235
BspFNI CGCG 1 cut(s) 223
BspPI GGATC 1 cut(s) 174
BssECI CCNNGG 2 cut(s) 36, 221
BssMI GATC 1 cut(s) 166
BssNAI GTATAC 1 cut(s) 189
BssT1I CCWWGG 1 cut(s) 36
Bst1107I GTATAC 1 cut(s) 189
Bst4CI ACNGT 2 cut(s) 116, 157
Bst6I CTCTTC 1 cut(s) 69
BstDEI CTNAG 1 cut(s) 243
BstDSI CCRYGG 1 cut(s) 221
BstFNI CGCG 1 cut(s) 223
BstKTI GATC 1 cut(s) 169
BstMAI GTCTC 1 cut(s) 191
BstMBI GATC 1 cut(s) 166
BstMWI GCNNNNNNNGC 2 cut(s) 147, 220
BstSCI CCNGG 1 cut(s) 283
BstSFI CTRYAG 1 cut(s) 6
BstUI CGCG 1 cut(s) 223
BstV1I GCAGC 2 cut(s) 125, 305
BstX2I RGATCY 1 cut(s) 166
BstXI CCANNNNNNTGG 1 cut(s) 181
BstYI RGATCY 1 cut(s) 166
BstZ17I GTATAC 1 cut(s) 189
BsuRI GGCC 1 cut(s) 214
BtgI CCRYGG 1 cut(s) 221
CaiI CAGNNNCTG 1 cut(s) 138
Cfr42I CCGCGG 1 cut(s) 224
Csp6I GTAC 1 cut(s) 117
CviAII CATG 1 cut(s) 304
CviQI GTAC 1 cut(s) 117
DdeI CTNAG 1 cut(s) 243
DpnI GATC 1 cut(s) 168
DpnII GATC 1 cut(s) 166
DriI GACNNNNNGTC 1 cut(s) 94
EaeI YGGCCR 1 cut(s) 212
Eam1104I CTCTTC 1 cut(s) 69
Eam1105I GACNNNNNGTC 1 cut(s) 94
EarI CTCTTC 1 cut(s) 69
EciI GGCGGA 1 cut(s) 137
Eco130I CCWWGG 1 cut(s) 36
Eco24I GRGCYC 1 cut(s) 152
Eco88I CYCGRG 1 cut(s) 322
EcoT14I CCWWGG 1 cut(s) 36
EcoT38I GRGCYC 1 cut(s) 152
ErhI CCWWGG 1 cut(s) 36
FaeI CATG 1 cut(s) 307
FaiI YATR 6 cut(s) 8, 21, 28, 189, 209, 305
FatI CATG 1 cut(s) 303
FblI GTMKAC 1 cut(s) 188
Fnu4HI GCNGC 3 cut(s) 139, 224, 319
FriOI GRGCYC 1 cut(s) 152
Fsp4HI GCNGC 3 cut(s) 139, 224, 319
FspBI CTAG 1 cut(s) 104
GluI GCNGC 3 cut(s) 139, 224, 319
HaeIII GGCC 1 cut(s) 214
HapII CCGG 1 cut(s) 284
Hin1II CATG 1 cut(s) 307
HinfI GANTC 7 cut(s) 53, 108, 199, 217, 274, 280, 343
HpaII CCGG 1 cut(s) 284
Hpy166II GTNNAC 1 cut(s) 189
Hpy188I TCNGA 2 cut(s) 279, 311
Hpy188III TCNNGA 1 cut(s) 271
Hpy8I GTNNAC 1 cut(s) 189
Hpy99I CGWCG 1 cut(s) 100
HpyCH4III ACNGT 2 cut(s) 116, 157
HpyF10VI GCNNNNNNNGC 2 cut(s) 147, 220
HpyF3I CTNAG 1 cut(s) 243
Hsp92II CATG 1 cut(s) 307
KspI CCGCGG 1 cut(s) 224
Kzo9I GATC 1 cut(s) 166
LmnI GCTCC 3 cut(s) 124, 135, 365
LpnPI CCDG 3 cut(s) 118, 297, 344
Lsp1109I GCAGC 2 cut(s) 125, 305
MaeI CTAG 1 cut(s) 104
MalI GATC 1 cut(s) 168
MboI GATC 1 cut(s) 166
MboII GAAGA 1 cut(s) 56
MflI RGATCY 1 cut(s) 166
MhlI GDGCHC 1 cut(s) 152
MluCI AATT 2 cut(s) 251, 349
MlyI GAGTC 3 cut(s) 47, 193, 352
MnlI CCTC 7 cut(s) 34, 238, 241, 281, 353, 356, 371
MseI TTAA 2 cut(s) 161, 356
MspA1I CMGCKG 1 cut(s) 223
MspI CCGG 1 cut(s) 284
MspR9I CCNGG 1 cut(s) 285
MvnI CGCG 1 cut(s) 223
MwoI GCNNNNNNNGC 2 cut(s) 147, 220
NciI CCSGG 1 cut(s) 285
NdeII GATC 1 cut(s) 166
NlaIII CATG 1 cut(s) 307
PcsI WCGNNNNNNNCGW 1 cut(s) 84
PfeI GAWTC 4 cut(s) 108, 217, 274, 280
PfoI TCCNGGA 1 cut(s) 283
PkrI GCNGC 3 cut(s) 140, 225, 320
PleI GAGTC 3 cut(s) 47, 193, 351
PpsI GAGTC 3 cut(s) 47, 193, 351
PstNI CAGNNNCTG 1 cut(s) 138
PsuI RGATCY 1 cut(s) 166
RsaI GTAC 1 cut(s) 118
RsaNI GTAC 1 cut(s) 117
SacII CCGCGG 1 cut(s) 224
SaqAI TTAA 2 cut(s) 161, 356
SatI GCNGC 3 cut(s) 139, 224, 319
Sau3AI GATC 1 cut(s) 166
SchI GAGTC 3 cut(s) 47, 193, 352
ScrFI CCNGG 1 cut(s) 285
SduI GDGCHC 1 cut(s) 152
SetI ASST 4 cut(s) 129, 140, 244, 370
SfcI CTRYAG 1 cut(s) 6
Sfr303I CCGCGG 1 cut(s) 224
SgrBI CCGCGG 1 cut(s) 224
Sse9I AATT 2 cut(s) 251, 349
SsiI CCGC 5 cut(s) 33, 46, 122, 221, 223
SspMI CTAG 1 cut(s) 104
StyD4I CCNGG 1 cut(s) 283
StyI CCWWGG 1 cut(s) 36
TaaI ACNGT 2 cut(s) 116, 157
TaqI TCGA 1 cut(s) 67
TasI AATT 2 cut(s) 251, 349
TauI GCSGC 1 cut(s) 226
TfiI GAWTC 4 cut(s) 108, 217, 274, 280
Tru1I TTAA 2 cut(s) 161, 356
Tru9I TTAA 2 cut(s) 161, 356
TseI GCWGC 2 cut(s) 138, 318
TspDTI ATGAA 1 cut(s) 292
XmiI GTMKAC 1 cut(s) 188
XspI CTAG 1 cut(s) 104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.