RLG00000036792

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
84672620 .. 84674117
1498 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036792

Sequence Viewer

Length: 1044 bp
ATGCCCATGGAGACGTCACTATTATCTGTAGTGACAAACTCTTGGAGCAGTGGATTAGTGATTACAACTCCTCAGGGTGAACAGCTATGGAGATCTGATCTAACCATTGCTGGTGTTGTTGCTCATGGGTTTATGAATGATAAGGGTAACTTTGTTCTGGAAGATGAGAAGTCAGAAAAGTTATGGGAGACATTCAAGAATCCTACTGATACCATGTTGCCTGGGCAAATAATAGAAAGAGGAGGTAGACTTTCTTCTCGACAATCAGAGACTAACTATGCAAGAGGACGCTTCCAGATAGATTTTCAAGAAGATGGGAATCTTGTGTTTAGTGCCAAAAAACCTTTTTATTCTACTGCAACTACCATGGGGACTGTTCCAGGTAGTGAAGGTAAACAATTGGTTTTCAATGACTCCGGCAACTTCTATATTCTGCGAGTGAATGGTGGAAGATTCACTTTCACAGCAGAGGAACGCCTAGCAAGGGACTACTATCTCAGGTCAACTCTCAACTTTGATGGAGTTTTGGCTCAATATTTTCTCCCCAAGTCTTTTGTTGACACTGTAAGCTGGAAACCTCTTTGGTCAGAACCAGATAACATTTGCCAGAAAGTTGATTCAGGTGCTGGTGTATGTGGGTACAACAGCATCTGTACTCTGAAAACAGATCAGAGGCCAACCTGTAAATGCCCAATGGGATACTCTTTGCTTGATCCAAATGACCCGTACGGGACCTGCAATCCAAATTTCAGACGTGGCTGTGAAGATGAGCCTAGTTTTTCAAAAGATCTCTTTGATGTTCAGGTGCTACCAAATACTGACTGGCTTACCCCCGGTTATGAGCTGTTAAATGCTTCTACTGCAGACAAATGCAATCAATATTGCAAGCAAGATTGTTTGTGTGATGTTGCTATCTACCGCAATGAAACCTGTTGGAAAAAGAAATTACCTCTCTCATATGGGAGAGAAGACAGTAGTCTGAATGCAAAGACCTTCATCAAATTCAGGAAGGATAATTCAACTCTACCAGCTCCACCATGTTGA

Protein Analysis

348

Amino Acids

39.05

Weight (kDa)

5.34

Isoelectric Point (pI)

37.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 14 - 79 1.1e-08 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 17
Acc36I ACCTGC 1 cut(s) 743
AccI GTMKAC 1 cut(s) 247
AciI CCGC 1 cut(s) 919
AclWI GGATC 1 cut(s) 707
AcsI RAATTY 2 cut(s) 745, 1001
AcyI GRCGYC 1 cut(s) 14
AfaI GTAC 3 cut(s) 641, 655, 728
AfiI CCNNNNNNNGG 1 cut(s) 484
AgsI TTSAA 5 cut(s) 196, 308, 409, 783, 1020
AjiI CACGTC 1 cut(s) 755
AjnI CCWGG 2 cut(s) 220, 379
AluBI AGCT 4 cut(s) 85, 570, 844, 1031
AluI AGCT 4 cut(s) 85, 570, 844, 1031
Alw26I GTCTC 3 cut(s) 5, 182, 263
AlwI GGATC 1 cut(s) 707
AlwNI CAGNNNCTG 2 cut(s) 626, 651
AoxI GGCC 1 cut(s) 674
ApoI RAATTY 2 cut(s) 745, 1001
AspS9I GGNCC 1 cut(s) 732
AsuC2I CCSGG 1 cut(s) 834
AsuHPI GGTGA 1 cut(s) 89
AvaII GGWCC 1 cut(s) 732
AxyI CCTNAGG 1 cut(s) 72
BarI GAAGNNNNNNTAC 2 cut(s) 238, 270
BbsI GAAGAC 1 cut(s) 975
BccI CCATC 2 cut(s) 308, 512
BciT130I CCWGG 2 cut(s) 222, 381
BciVI GTATCC 1 cut(s) 692
BcnI CCSGG 1 cut(s) 834
BcoDI GTCTC 3 cut(s) 5, 182, 263
BfaI CTAG 2 cut(s) 479, 774
BfmI CTRYAG 2 cut(s) 27, 861
BfuAI ACCTGC 1 cut(s) 743
BfuI GTATCC 1 cut(s) 692
BglII AGATCT 2 cut(s) 92, 787
Bme1390I CCNGG 3 cut(s) 222, 381, 834
Bme18I GGWCC 1 cut(s) 732
BmgBI CACGTC 1 cut(s) 755
BmgT120I GGNCC 1 cut(s) 732
BmiI GGNNCC 1 cut(s) 733
BmrFI CCNGG 3 cut(s) 222, 381, 834
BmsI GCATC 1 cut(s) 657
BoxI GACNNNNGTC 1 cut(s) 975
BpiI GAAGAC 1 cut(s) 975
BpuMI CCSGG 1 cut(s) 834
BsaBI GATNNNNATC 1 cut(s) 318
BsaHI GRCGYC 1 cut(s) 14
BsaJI CCNNGG 4 cut(s) 6, 221, 366, 832
Bsc4I CCNNNNNNNGG 1 cut(s) 484
Bse1I ACTGG 1 cut(s) 827
Bse21I CCTNAGG 1 cut(s) 72
Bse3DI GCAATG 2 cut(s) 105, 928
Bse8I GATNNNNATC 1 cut(s) 318
BseBI CCWGG 2 cut(s) 222, 381
BseDI CCNNGG 4 cut(s) 6, 221, 366, 832
BseJI GATNNNNATC 1 cut(s) 318
BseLI CCNNNNNNNGG 1 cut(s) 484
BseMI GCAATG 2 cut(s) 105, 928
BseMII CTCAG 2 cut(s) 86, 511
BseNI ACTGG 1 cut(s) 827
BseRI GAGGAG 2 cut(s) 60, 255
BshFI GGCC 1 cut(s) 676
BsiSI CCGG 2 cut(s) 417, 834
BsiWI CGTACG 1 cut(s) 726
BslFI GGGAC 3 cut(s) 385, 500, 745
BslI CCNNNNNNNGG 1 cut(s) 484
BsmAI GTCTC 3 cut(s) 5, 182, 263
BsmBI CGTCTC 1 cut(s) 5
BsmFI GGGAC 3 cut(s) 385, 500, 745
BsmI GAATGC 1 cut(s) 988
BsnI GGCC 1 cut(s) 676
Bsp143I GATC 5 cut(s) 92, 97, 667, 712, 787
Bsp19I CCATGG 2 cut(s) 6, 366
BspACI CCGC 1 cut(s) 919
BspANI GGCC 1 cut(s) 676
BspCNI CTCAG 2 cut(s) 85, 510
BspLI GGNNCC 1 cut(s) 733
BspMAI CTGCAG 1 cut(s) 865
BspMI ACCTGC 1 cut(s) 743
BspPI GGATC 1 cut(s) 707
BsrDI GCAATG 2 cut(s) 105, 928
BsrI ACTGG 1 cut(s) 827
BssECI CCNNGG 4 cut(s) 6, 221, 366, 832
BssMI GATC 5 cut(s) 92, 97, 667, 712, 787
BssNI GRCGYC 1 cut(s) 14
BssT1I CCWWGG 2 cut(s) 6, 366
Bst2UI CCWGG 2 cut(s) 222, 381
Bst4CI ACNGT 3 cut(s) 376, 565, 974
BstACI GRCGYC 1 cut(s) 14
BstC8I GCNNGC 1 cut(s) 887
BstDEI CTNAG 2 cut(s) 72, 497
BstDSI CCRYGG 2 cut(s) 6, 366
BstKTI GATC 5 cut(s) 95, 100, 670, 715, 790
BstMAI GTCTC 3 cut(s) 5, 182, 263
BstMBI GATC 5 cut(s) 92, 97, 667, 712, 787
BstMWI GCNNNNNNNGC 1 cut(s) 860
BstNI CCWGG 2 cut(s) 222, 381
BstPAI GACNNNNGTC 1 cut(s) 975
BstSCI CCNGG 3 cut(s) 220, 379, 832
BstSFI CTRYAG 2 cut(s) 27, 861
BstV2I GAAGAC 1 cut(s) 975
BstX2I RGATCY 2 cut(s) 92, 787
BstYI RGATCY 2 cut(s) 92, 787
Bsu36I CCTNAGG 1 cut(s) 72
BsuI GTATCC 1 cut(s) 692
BsuRI GGCC 1 cut(s) 676
BtgI CCRYGG 2 cut(s) 6, 366
BtrI CACGTC 1 cut(s) 755
BtsI GCAGTG 1 cut(s) 55
BtsIMutI CAGTG 2 cut(s) 55, 561
BveI ACCTGC 1 cut(s) 743
Cac8I GCNNGC 1 cut(s) 887
CaiI CAGNNNCTG 2 cut(s) 626, 651
Cfr13I GGNCC 1 cut(s) 732
CseI GACGC 1 cut(s) 297
Csp6I GTAC 3 cut(s) 640, 654, 727
CviAII CATG 5 cut(s) 7, 125, 214, 367, 1038
CviJI RGCY 9 cut(s) 85, 530, 570, 676, 759, 772, 826, 844, 1031
CviKI_1 RGCY 9 cut(s) 85, 530, 570, 676, 759, 772, 826, 844, 1031
CviQI GTAC 3 cut(s) 640, 654, 727
DdeI CTNAG 2 cut(s) 72, 497
DpnI GATC 5 cut(s) 94, 99, 669, 714, 789
DpnII GATC 5 cut(s) 92, 97, 667, 712, 787
Eco130I CCWWGG 2 cut(s) 6, 366
Eco47I GGWCC 1 cut(s) 732
Eco81I CCTNAGG 1 cut(s) 72
EcoO109I RGGNCCY 1 cut(s) 732
EcoRII CCWGG 2 cut(s) 220, 379
EcoT14I CCWWGG 2 cut(s) 6, 366
ErhI CCWWGG 2 cut(s) 6, 366
Esp3I CGTCTC 1 cut(s) 5
FaeI CATG 5 cut(s) 10, 128, 217, 370, 1041
FalI AAGNNNNNCTT 4 cut(s) 134, 166, 442, 474
FaqI GGGAC 3 cut(s) 385, 500, 745
FatI CATG 5 cut(s) 6, 124, 213, 366, 1037
FauNDI CATATG 1 cut(s) 958
FblI GTMKAC 1 cut(s) 247
FspBI CTAG 2 cut(s) 479, 774
HaeIII GGCC 1 cut(s) 676
HapII CCGG 2 cut(s) 417, 834
HgaI GACGC 1 cut(s) 297
Hin1I GRCGYC 1 cut(s) 14
Hin1II CATG 5 cut(s) 10, 128, 217, 370, 1041
HincII GTYRAC 2 cut(s) 504, 559
HindII GTYRAC 2 cut(s) 504, 559
HinfI GANTC 5 cut(s) 199, 319, 413, 453, 617
HpaII CCGG 2 cut(s) 417, 834
HphI GGTGA 1 cut(s) 89
Hpy166II GTNNAC 5 cut(s) 80, 248, 395, 504, 559
Hpy188I TCNGA 8 cut(s) 97, 175, 268, 589, 660, 672, 752, 981
Hpy188III TCNNGA 6 cut(s) 158, 196, 258, 295, 308, 1006
Hpy8I GTNNAC 5 cut(s) 80, 248, 395, 504, 559
HpyAV CCTTC 3 cut(s) 383, 1003, 1003
HpyCH4III ACNGT 3 cut(s) 376, 565, 974
HpyCH4IV ACGT 2 cut(s) 14, 754
HpyCH4V TGCA 7 cut(s) 281, 359, 738, 863, 873, 885, 986
HpyF10VI GCNNNNNNNGC 1 cut(s) 860
HpyF3I CTNAG 2 cut(s) 72, 497
HpySE526I ACGT 2 cut(s) 14, 754
Hsp92I GRCGYC 1 cut(s) 14
Hsp92II CATG 5 cut(s) 10, 128, 217, 370, 1041
Kzo9I GATC 5 cut(s) 92, 97, 667, 712, 787
LmnI GCTCC 2 cut(s) 45, 1036
LweI GCATC 1 cut(s) 657
MaeI CTAG 2 cut(s) 479, 774
MaeII ACGT 2 cut(s) 14, 754
MaeIII GTNAC 3 cut(s) 15, 31, 146
MalI GATC 5 cut(s) 94, 99, 669, 714, 789
MboI GATC 5 cut(s) 92, 97, 667, 712, 787
MboII GAAGA 6 cut(s) 173, 246, 323, 462, 776, 980
MfeI CAATTG 1 cut(s) 398
MflI RGATCY 2 cut(s) 92, 787
MluCI AATT 5 cut(s) 398, 745, 944, 1001, 1015
MlyI GAGTC 1 cut(s) 407
MmeI TCCRAC 1 cut(s) 914
MnlI CCTC 8 cut(s) 81, 233, 236, 278, 463, 588, 666, 960
MseI TTAA 1 cut(s) 848
MspI CCGG 2 cut(s) 417, 834
MspR9I CCNGG 3 cut(s) 222, 381, 834
MunI CAATTG 1 cut(s) 398
Mva1269I GAATGC 1 cut(s) 988
MvaI CCWGG 2 cut(s) 222, 381
MwoI GCNNNNNNNGC 1 cut(s) 860
NciI CCSGG 1 cut(s) 834
NcoI CCATGG 2 cut(s) 6, 366
NdeI CATATG 1 cut(s) 958
NdeII GATC 5 cut(s) 92, 97, 667, 712, 787
NlaIII CATG 5 cut(s) 10, 128, 217, 370, 1041
NlaIV GGNNCC 1 cut(s) 733
NmuCI GTSAC 2 cut(s) 15, 31
PctI GAATGC 1 cut(s) 988
PfeI GAWTC 4 cut(s) 199, 319, 453, 617
Pfl23II CGTACG 1 cut(s) 726
PleI GAGTC 1 cut(s) 407
PpsI GAGTC 1 cut(s) 407
PpuMI RGGWCCY 1 cut(s) 732
PshAI GACNNNNGTC 1 cut(s) 975
Psp5II RGGWCCY 1 cut(s) 732
Psp6I CCWGG 2 cut(s) 220, 379
PspGI CCWGG 2 cut(s) 220, 379
PspLI CGTACG 1 cut(s) 726
PspN4I GGNNCC 1 cut(s) 733
PspPI GGNCC 1 cut(s) 732
PspPPI RGGWCCY 1 cut(s) 732
PstI CTGCAG 1 cut(s) 865
PstNI CAGNNNCTG 2 cut(s) 626, 651
PsuI RGATCY 2 cut(s) 92, 787
RsaI GTAC 3 cut(s) 641, 655, 728
RsaNI GTAC 3 cut(s) 640, 654, 727
SaqAI TTAA 1 cut(s) 848
Sau3AI GATC 5 cut(s) 92, 97, 667, 712, 787
Sau96I GGNCC 1 cut(s) 732
SchI GAGTC 1 cut(s) 407
ScrFI CCNGG 3 cut(s) 222, 381, 834
SfaNI GCATC 1 cut(s) 657
SfcI CTRYAG 2 cut(s) 27, 861
SinI GGWCC 1 cut(s) 732
Sse9I AATT 5 cut(s) 398, 745, 944, 1001, 1015
SsiI CCGC 1 cut(s) 919
SspI AATATT 2 cut(s) 536, 881
SspMI CTAG 2 cut(s) 479, 774
StyD4I CCNGG 3 cut(s) 220, 379, 832
StyI CCWWGG 2 cut(s) 6, 366
TaaI ACNGT 3 cut(s) 376, 565, 974
TaiI ACGT 2 cut(s) 17, 757
TaqI TCGA 1 cut(s) 259
TasI AATT 5 cut(s) 398, 745, 944, 1001, 1015
TatI WGTACW 1 cut(s) 653
TfiI GAWTC 4 cut(s) 199, 319, 453, 617
Tru1I TTAA 1 cut(s) 848
Tru9I TTAA 1 cut(s) 848
TscAI CASTG 2 cut(s) 55, 568
TseFI GTSAC 2 cut(s) 15, 31
Tsp45I GTSAC 2 cut(s) 15, 31
TspDTI ATGAA 3 cut(s) 149, 939, 985
TspRI CASTG 2 cut(s) 55, 568
VpaK11BI GGWCC 1 cut(s) 732
XapI RAATTY 2 cut(s) 745, 1001
XcmI CCANNNNNNNNNTGG 1 cut(s) 819
XmiI GTMKAC 1 cut(s) 247
XspI CTAG 2 cut(s) 479, 774
ZraI GACGTC 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.