Rroxscaffold_1G00003950

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
5275558 .. 5277894
2337 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00003950.1

Sequence Viewer

Length: 2337 bp
ATGGCTTTTACTGTATGTTTGTTTTTGCTTTCTTCATTGCTTCTGCTACCAACTTATGTGCTTGCACAAACTAATGGTAGCATAGCTGTGGGTGATTCTCTCTCCACAGCAGGTAACTCCTCATGGCTTTCTCCCTCGGGTGATTTTGCCTTTGGGTTTCGGCAACTTGAAAACAATGATCTTTTCTTGCTTTCTATATGGTTTGCCAAGATACCAGACAAAACCATAGTTTGGTATGCAAATGGGGATAAGCCTGCACCTAATGGTTCAGTTGTGAATTTGACTGCTAACAGTGGGCTAGTTCTTACAAGTCCTCAGGGTGAGCAGTTATGGAAATCCAATCAAACCATTGCTGGCGTTGTTGCTCACGGGGTTATGAACGATGCAGGTAACTTTGTTCTGGAAAACGAGAAGTCTGCAAAATTATGGGAGACGTTCAAGAATCCTACTGATACCATGTTGCCTGGGCAAATACTGGAAAGAGGAGGGAAGCTTTCTTCTCGAAATTCAGAGACCGACTATACGAGAGGTCACTTCCAGCTAGATTTTCAAGATGATGGAAATCTTGTGCTTAGTGGGCAAAGACCTTTTTATTCAACCGAGACTACCACAGGGAGTGTTCCAGGTAGTGAAGGTCTGCAGTTGGTTTTCAATGACTCAGGTAACTTCTATATTCTGCGAGTGAATGGTGGATATTATAACTTCACAGCAGAGGAACTTGCAGCAAGGGACTACTATCTCCGGACAACTCTCAGCTTTGATGGGGTTTTGGCTCAATATTTCCTCCCAAAGACTTCTGTTGGCAATATAAGCTGGGTTCCTCTTTGGTCAGAGCCATCAAATATTTGCCAAAAAACTAATGCTGATTCAGGTCCTAGTATTTGTGGGTACAACAGTATCTGCACTTACAAAGCAGACAAGAGGCCCACCTGTGAATGCCCAACGGGATACTCTTTACTTGATCCAAATGATCCATACGGGAGCTGCTATCCAGCTTTCAAACAAGGCTGTGAAAATGAGCCTGGTCATGCAGAAGATTTGTATGATGTTCAGGTGCTAGCAAACACTGATTGGCTCACCTCCAGCTATATGCAGTTAAATGATTCTACTGCTGACACATGCAGTCAATCTTGCTTGCAAGATTGTTCATGTGCTGTTGCTATTTACAGCAATCAAACCTGCCAGAAAAAGAAGTTTCCACTCTCATATGGGAGAGAAGACAACAACTTGAATGCAACAACCTTCATCAAATTGATGACCGTTAAGAAGAAGAAGAGCGGAACCACTTTGGTACATGGAGGATCAGTTCTTCTGGGCATCTCTGTCGTTGTTATTTTTATGTCAGGTACTGCAGTATGTCTGGGACTTTTCTTCAATTTCCGGAAGAAACATGCAAGGTTTCCGCAAATTGATTTGGACACAAATTTGCACTCTTTCAGTCACGAAGAGCTTGAAGAAGCAACAAATGGATTCAACGAAGAATTAGGGAGGGGTTCTTTTGGAGTTGTTTACAAAGGGATAATACAAATCGGTTCGGGTGTCCAAGTGGCAGTGAAGAAGCTCAACTGTTGGATACAAGATGGTGAGAAGGAATTCAAGACAGAACTGAACATAATTGGTCGGACACATCACAAGAATTTGGTTCACCTGGTTGGATATTGTGATGAGGGACAACAGCGATCACTAGTATATGAATTCTTGAGCAATGGAACATTAGCAGGCTTCCTTTTTGGTGATGAGAAACCCAGTTGGAGGCAACGAATGGAAATTGCTTATGGTGTTGCCAAAGGGCTTCTGTATTTGCATGAAGAGTGTACCACCCAAATCATCCATTGTGATATAAAGCCTCAGAACATTCTTCTTGATGATAATTACAATGCTCGGATCTCTGATTTCGGCTTGGCGAAACTTTTGATGACGAATCAGAGCAAGACGCATACTGCCATTAGAGGAACAAAAGGTTATGTTGCACCTGAGTGGTTTAGGAACATGGCAATCACTACCAAAGTTGATGTGTATAGCTTTGGTGTGGTGCTGCTAGAGATCATTTGTTGTAGGAGAAGTGTTGATATGGATAATGATTATGAAGAAAAAGCAATTTTAACGGATTGGGTTTATGATTGCTACCGAGAAGGATTATTGGAGGCTATTCTGGATCACAAAGTTGATGCCTTGGATTATGAAATGAAGCTAGAAGAGACCGTCATGATTGCTCTGTGGTGTATTCAAGAAGACCCGTCTCGTCGACCCACGATGCGGAAGGTTGTGCAGATGCTTGAAGGAGTAGTGGAAGTACCTGTTCCACCGTGTCCATCCCCATATAGCAAAGCGGCATGA

Protein Analysis

778

Amino Acids

86.5

Weight (kDa)

5.22

Isoelectric Point (pI)

36.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 160 5.8e-15 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 491 - 759 2.8e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 492 - 757 1.9e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 699
Acc36I ACCTGC 3 cut(s) 101, 377, 1187
AccB7I CCANNNNNTGG 1 cut(s) 231
AccBSI CCGCTC 1 cut(s) 1278
AccI GTMKAC 1 cut(s) 2245
AccIII TCCGGA 2 cut(s) 741, 1380
AciI CCGC 4 cut(s) 1278, 1403, 2257, 2330
AclWI GGATC 5 cut(s) 956, 965, 1309, 1892, 2163
AcsI RAATTY 6 cut(s) 277, 505, 1423, 1592, 1636, 1694
AfaI GTAC 5 cut(s) 890, 1293, 1348, 1816, 2295
AfiI CCNNNNNNNGG 3 cut(s) 231, 1752, 2256
AhlI ACTAGT 1 cut(s) 1684
AjnI CCWGG 4 cut(s) 463, 622, 1021, 1647
AleI CACNNNNGTG 1 cut(s) 1975
AloI GAACNNNNNNTCC 2 cut(s) 1290, 1322
Alw26I GTCTC 5 cut(s) 425, 506, 596, 2192, 2244
AlwI GGATC 5 cut(s) 956, 965, 1309, 1892, 2163
AlwNI CAGNNNCTG 2 cut(s) 900, 1349
Ama87I CYCGRG 1 cut(s) 136
Aor13HI TCCGGA 2 cut(s) 741, 1380
AoxI GGCC 1 cut(s) 923
ApeKI GCWGC 3 cut(s) 722, 984, 2035
ApoI RAATTY 6 cut(s) 277, 505, 1423, 1592, 1636, 1694
Asp700I GAANNNNTTC 1 cut(s) 1592
AspS9I GGNCC 2 cut(s) 872, 924
AsuHPI GGTGA 7 cut(s) 104, 152, 332, 1069, 1595, 1637, 1745
AsuNHI GCTAGC 1 cut(s) 1057
AvaI CYCGRG 1 cut(s) 136
AvaII GGWCC 1 cut(s) 872
AxyI CCTNAGG 1 cut(s) 315
BaeI ACNNNNGTAYC 6 cut(s) 880, 880, 913, 913, 1338, 1371
BbsI GAAGAC 2 cut(s) 1224, 2238
BbvI GCAGC 3 cut(s) 734, 971, 2022
BccI CCATC 5 cut(s) 551, 755, 844, 1574, 2320
BcgI CGANNNNNNTGC 4 cut(s) 398, 432, 1306, 1340
BciT130I CCWGG 4 cut(s) 465, 624, 1023, 1649
BciVI GTATCC 2 cut(s) 941, 1566
BcoDI GTCTC 5 cut(s) 425, 506, 596, 2192, 2244
BcuI ACTAGT 1 cut(s) 1684
BfaI CTAG 7 cut(s) 299, 542, 876, 1058, 1685, 2039, 2192
BfmI CTRYAG 2 cut(s) 638, 1350
BfuAI ACCTGC 3 cut(s) 101, 377, 1187
BfuI GTATCC 2 cut(s) 941, 1566
BisI GCNGC 4 cut(s) 723, 985, 2036, 2331
BlsI GCNGC 4 cut(s) 724, 986, 2037, 2332
Bme1390I CCNGG 4 cut(s) 465, 624, 1023, 1649
Bme18I GGWCC 1 cut(s) 872
BmeT110I CYCGRG 1 cut(s) 136
BmgT120I GGNCC 2 cut(s) 872, 924
BmiI GGNNCC 2 cut(s) 819, 1282
BmrFI CCNGG 4 cut(s) 465, 624, 1023, 1649
BmrI ACTGGG 1 cut(s) 1740
BmsI GCATC 5 cut(s) 373, 1326, 2158, 2244, 2262
BmtI GCTAGC 1 cut(s) 1061
BmuI ACTGGG 1 cut(s) 1740
BpiI GAAGAC 2 cut(s) 1224, 2238
BpmI CTGGAG 1 cut(s) 1066
BpuEI CTTGAG 1 cut(s) 1720
BsaBI GATNNNNATC 1 cut(s) 561
BsaI GGTCTC 2 cut(s) 506, 2192
BsaJI CCNNGG 3 cut(s) 135, 464, 2172
BsaWI WCCGGW 2 cut(s) 741, 1380
BsaXI ACNNNNNCTCC 2 cut(s) 1290, 1320
Bsc4I CCNNNNNNNGG 3 cut(s) 231, 1752, 2256
Bse1I ACTGG 2 cut(s) 480, 1746
Bse21I CCTNAGG 1 cut(s) 315
Bse3DI GCAATG 3 cut(s) 35, 348, 1711
Bse8I GATNNNNATC 1 cut(s) 561
BseAI TCCGGA 2 cut(s) 741, 1380
BseBI CCWGG 4 cut(s) 465, 624, 1023, 1649
BseDI CCNNGG 3 cut(s) 135, 464, 2172
BseGI GGATG 2 cut(s) 1827, 2312
BseJI GATNNNNATC 1 cut(s) 561
BseLI CCNNNNNNNGG 3 cut(s) 231, 1752, 2256
BseMI GCAATG 3 cut(s) 35, 348, 1711
BseMII CTCAG 5 cut(s) 329, 672, 766, 1862, 1965
BseNI ACTGG 2 cut(s) 480, 1746
BseRI GAGGAG 2 cut(s) 109, 498
BseXI GCAGC 3 cut(s) 734, 971, 2022
BseYI CCCAGC 1 cut(s) 813
BsgI GTGCAG 3 cut(s) 240, 886, 2288
BshFI GGCC 1 cut(s) 925
BsiHKCI CYCGRG 1 cut(s) 136
BsiSI CCGG 2 cut(s) 742, 1381
BslFI GGGAC 3 cut(s) 743, 1377, 1683
BslI CCNNNNNNNGG 3 cut(s) 231, 1752, 2256
BsmAI GTCTC 5 cut(s) 425, 506, 596, 2192, 2244
BsmBI CGTCTC 2 cut(s) 425, 2244
BsmFI GGGAC 3 cut(s) 743, 1377, 1683
BsmI GAATGC 2 cut(s) 941, 1237
BsnI GGCC 1 cut(s) 925
Bso31I GGTCTC 2 cut(s) 506, 2192
BsoBI CYCGRG 1 cut(s) 136
Bsp13I TCCGGA 2 cut(s) 741, 1380
Bsp143I GATC 8 cut(s) 178, 961, 970, 1301, 1679, 1884, 2043, 2155
BspACI CCGC 4 cut(s) 1278, 1403, 2257, 2330
BspANI GGCC 1 cut(s) 925
BspCNI CTCAG 5 cut(s) 328, 671, 765, 1861, 1966
BspEI TCCGGA 2 cut(s) 741, 1380
BspHI TCATGA 1 cut(s) 2205
BspLI GGNNCC 2 cut(s) 819, 1282
BspMAI CTGCAG 2 cut(s) 642, 1354
BspMI ACCTGC 3 cut(s) 101, 377, 1187
BspOI GCTAGC 1 cut(s) 1061
BspPI GGATC 5 cut(s) 956, 965, 1309, 1892, 2163
BspQI GCTCTTC 2 cut(s) 1268, 1440
BspTNI GGTCTC 2 cut(s) 506, 2192
BsrBI CCGCTC 1 cut(s) 1278
BsrDI GCAATG 3 cut(s) 35, 348, 1711
BsrI ACTGG 2 cut(s) 480, 1746
BssECI CCNNGG 3 cut(s) 135, 464, 2172
BssMI GATC 8 cut(s) 178, 961, 970, 1301, 1679, 1884, 2043, 2155
BssT1I CCWWGG 1 cut(s) 2172
Bst2UI CCWGG 4 cut(s) 465, 624, 1023, 1649
Bst4CI ACNGT 7 cut(s) 13, 293, 896, 1261, 1568, 2203, 2307
Bst6I CTCTTC 4 cut(s) 1268, 1440, 1803, 2190
BstC8I GCNNGC 6 cut(s) 63, 255, 355, 1059, 1136, 1720
BstDEI CTNAG 6 cut(s) 315, 572, 658, 752, 1848, 1974
BstF5I GGATG 2 cut(s) 1827, 2312
BstKTI GATC 8 cut(s) 181, 964, 973, 1304, 1682, 1887, 2046, 2158
BstMAI GTCTC 5 cut(s) 425, 506, 596, 2192, 2244
BstMBI GATC 8 cut(s) 178, 961, 970, 1301, 1679, 1884, 2043, 2155
BstMWI GCNNNNNNNGC 2 cut(s) 577, 810
BstNI CCWGG 4 cut(s) 465, 624, 1023, 1649
BstNSI RCATGY 2 cut(s) 1122, 1394
BstSCI CCNGG 4 cut(s) 463, 622, 1021, 1647
BstSFI CTRYAG 2 cut(s) 638, 1350
BstV1I GCAGC 3 cut(s) 734, 971, 2022
BstV2I GAAGAC 2 cut(s) 1224, 2238
BstX2I RGATCY 1 cut(s) 1884
BstYI RGATCY 1 cut(s) 1884
Bsu36I CCTNAGG 1 cut(s) 315
BsuI GTATCC 2 cut(s) 941, 1566
BsuRI GGCC 1 cut(s) 925
BtsCI GGATG 2 cut(s) 1827, 2312
BtsI GCAGTG 1 cut(s) 1557
BtsIMutI CAGTG 3 cut(s) 298, 1065, 1557
BveI ACCTGC 3 cut(s) 101, 377, 1187
Cac8I GCNNGC 6 cut(s) 63, 255, 355, 1059, 1136, 1720
CaiI CAGNNNCTG 2 cut(s) 900, 1349
CciI TCATGA 1 cut(s) 2205
Cfr13I GGNCC 2 cut(s) 872, 924
CseI GACGC 1 cut(s) 1942
CsiI ACCWGGT 1 cut(s) 1647
Csp6I GTAC 5 cut(s) 889, 1292, 1347, 1815, 2294
CviQI GTAC 5 cut(s) 889, 1292, 1347, 1815, 2294
DdeI CTNAG 6 cut(s) 315, 572, 658, 752, 1848, 1974
DpnI GATC 8 cut(s) 180, 963, 972, 1303, 1681, 1886, 2045, 2157
DpnII GATC 8 cut(s) 178, 961, 970, 1301, 1679, 1884, 2043, 2155
Eam1104I CTCTTC 4 cut(s) 1268, 1440, 1803, 2190
EarI CTCTTC 4 cut(s) 1268, 1440, 1803, 2190
Eco130I CCWWGG 1 cut(s) 2172
Eco31I GGTCTC 2 cut(s) 506, 2192
Eco47I GGWCC 1 cut(s) 872
Eco81I CCTNAGG 1 cut(s) 315
Eco88I CYCGRG 1 cut(s) 136
EcoO109I RGGNCCY 1 cut(s) 872
EcoRI GAATTC 2 cut(s) 1592, 1694
EcoRII CCWGG 4 cut(s) 463, 622, 1021, 1647
EcoT14I CCWWGG 1 cut(s) 2172
ErhI CCWWGG 1 cut(s) 2172
Esp3I CGTCTC 2 cut(s) 425, 2244
FaqI GGGAC 3 cut(s) 743, 1377, 1683
FauNDI CATATG 1 cut(s) 1207
FblI GTMKAC 1 cut(s) 2245
Fnu4HI GCNGC 4 cut(s) 723, 985, 2036, 2331
FokI GGATG 2 cut(s) 1814, 2299
Fsp4HI GCNGC 4 cut(s) 723, 985, 2036, 2331
FspBI CTAG 7 cut(s) 299, 542, 876, 1058, 1685, 2039, 2192
GluI GCNGC 4 cut(s) 723, 985, 2036, 2331
GsaI CCCAGC 1 cut(s) 817
GsuI CTGGAG 1 cut(s) 1066
HaeIII GGCC 1 cut(s) 925
HapII CCGG 2 cut(s) 742, 1381
HgaI GACGC 1 cut(s) 1942
HincII GTYRAC 1 cut(s) 2246
HindII GTYRAC 1 cut(s) 2246
HindIII AAGCTT 1 cut(s) 491
HinfI GANTC 7 cut(s) 95, 442, 656, 866, 1103, 1470, 1921
HpaII CCGG 2 cut(s) 742, 1381
HphI GGTGA 7 cut(s) 104, 152, 332, 1069, 1595, 1637, 1745
Hpy166II GTNNAC 4 cut(s) 1510, 1645, 1815, 2246
Hpy188I TCNGA 7 cut(s) 511, 832, 1623, 1851, 1884, 1891, 1926
Hpy8I GTNNAC 4 cut(s) 1510, 1645, 1815, 2246
Hpy99I CGWCG 1 cut(s) 2247
HpyAV CCTTC 6 cut(s) 626, 1252, 1582, 2126, 2254, 2273
HpyCH4III ACNGT 7 cut(s) 13, 293, 896, 1261, 1568, 2203, 2307
HpyCH4IV ACGT 1 cut(s) 434
HpyF10VI GCNNNNNNNGC 2 cut(s) 577, 810
HpyF3I CTNAG 6 cut(s) 315, 572, 658, 752, 1848, 1974
HpySE526I ACGT 1 cut(s) 434
Kpn2I TCCGGA 2 cut(s) 741, 1380
Kzo9I GATC 8 cut(s) 178, 961, 970, 1301, 1679, 1884, 2043, 2155
LguI GCTCTTC 2 cut(s) 1268, 1440
LmnI GCTCC 1 cut(s) 981
Lsp1109I GCAGC 3 cut(s) 734, 971, 2022
LweI GCATC 5 cut(s) 373, 1326, 2158, 2244, 2262
MabI ACCWGGT 1 cut(s) 1647
MaeI CTAG 7 cut(s) 299, 542, 876, 1058, 1685, 2039, 2192
MaeII ACGT 1 cut(s) 434
MaeIII GTNAC 5 cut(s) 113, 389, 530, 662, 1439
MalI GATC 8 cut(s) 180, 963, 972, 1303, 1681, 1886, 2045, 2157
MbiI CCGCTC 1 cut(s) 1278
MboI GATC 8 cut(s) 178, 961, 970, 1301, 1679, 1884, 2043, 2155
MflI RGATCY 1 cut(s) 1884
MlyI GAGTC 1 cut(s) 650
MmeI TCCRAC 4 cut(s) 1550, 1601, 1633, 1730
MroI TCCGGA 2 cut(s) 741, 1380
MroXI GAANNNNTTC 1 cut(s) 1592
MseI TTAA 3 cut(s) 1097, 1263, 2102
MslI CAYNNNNRTG 2 cut(s) 86, 1975
MspI CCGG 2 cut(s) 742, 1381
MspR9I CCNGG 4 cut(s) 465, 624, 1023, 1649
Mva1269I GAATGC 2 cut(s) 941, 1237
MvaI CCWGG 4 cut(s) 465, 624, 1023, 1649
MwoI GCNNNNNNNGC 2 cut(s) 577, 810
NdeI CATATG 1 cut(s) 1207
NdeII GATC 8 cut(s) 178, 961, 970, 1301, 1679, 1884, 2043, 2155
NheI GCTAGC 1 cut(s) 1057
NlaIV GGNNCC 2 cut(s) 819, 1282
NmuCI GTSAC 2 cut(s) 530, 1439
NspI RCATGY 2 cut(s) 1122, 1394
OliI CACNNNNGTG 1 cut(s) 1975
PagI TCATGA 1 cut(s) 2205
PciSI GCTCTTC 2 cut(s) 1268, 1440
PctI GAATGC 2 cut(s) 941, 1237
PdmI GAANNNNTTC 1 cut(s) 1592
PfeI GAWTC 6 cut(s) 95, 442, 866, 1103, 1470, 1921
PflMI CCANNNNNTGG 1 cut(s) 231
PkrI GCNGC 4 cut(s) 724, 986, 2037, 2332
PleI GAGTC 1 cut(s) 650
PpsI GAGTC 1 cut(s) 650
PpuMI RGGWCCY 1 cut(s) 872
PsiI TTATAA 1 cut(s) 699
Psp5II RGGWCCY 1 cut(s) 872
Psp6I CCWGG 4 cut(s) 463, 622, 1021, 1647
PspFI CCCAGC 1 cut(s) 813
PspGI CCWGG 4 cut(s) 463, 622, 1021, 1647
PspN4I GGNNCC 2 cut(s) 819, 1282
PspPI GGNCC 2 cut(s) 872, 924
PspPPI RGGWCCY 1 cut(s) 872
PstI CTGCAG 2 cut(s) 642, 1354
PstNI CAGNNNCTG 2 cut(s) 900, 1349
PsuI RGATCY 1 cut(s) 1884
RsaI GTAC 5 cut(s) 890, 1293, 1348, 1816, 2295
RsaNI GTAC 5 cut(s) 889, 1292, 1347, 1815, 2294
RseI CAYNNNNRTG 2 cut(s) 86, 1975
SalI GTCGAC 1 cut(s) 2244
SapI GCTCTTC 2 cut(s) 1268, 1440
SaqAI TTAA 3 cut(s) 1097, 1263, 2102
SatI GCNGC 4 cut(s) 723, 985, 2036, 2331
Sau3AI GATC 8 cut(s) 178, 961, 970, 1301, 1679, 1884, 2043, 2155
Sau96I GGNCC 2 cut(s) 872, 924
SchI GAGTC 1 cut(s) 650
ScrFI CCNGG 4 cut(s) 465, 624, 1023, 1649
SexAI ACCWGGT 1 cut(s) 1647
SfaNI GCATC 5 cut(s) 373, 1326, 2158, 2244, 2262
SfcI CTRYAG 2 cut(s) 638, 1350
SinI GGWCC 1 cut(s) 872
SmiMI CAYNNNNRTG 2 cut(s) 86, 1975
SmlI CTYRAG 1 cut(s) 1699
SmoI CTYRAG 1 cut(s) 1699
SpeI ACTAGT 1 cut(s) 1684
SsiI CCGC 4 cut(s) 1278, 1403, 2257, 2330
SspI AATATT 2 cut(s) 779, 844
SspMI CTAG 7 cut(s) 299, 542, 876, 1058, 1685, 2039, 2192
StyD4I CCNGG 4 cut(s) 463, 622, 1021, 1647
StyI CCWWGG 1 cut(s) 2172
TaaI ACNGT 7 cut(s) 13, 293, 896, 1261, 1568, 2203, 2307
TaiI ACGT 1 cut(s) 437
TaqI TCGA 2 cut(s) 502, 2245
TaqII GACCGA 1 cut(s) 530
TauI GCSGC 1 cut(s) 2333
TfiI GAWTC 6 cut(s) 95, 442, 866, 1103, 1470, 1921
Tru1I TTAA 3 cut(s) 1097, 1263, 2102
Tru9I TTAA 3 cut(s) 1097, 1263, 2102
TscAI CASTG 3 cut(s) 298, 1072, 1557
TseFI GTSAC 2 cut(s) 530, 1439
TseI GCWGC 3 cut(s) 722, 984, 2035
Tsp45I GTSAC 2 cut(s) 530, 1439
TspDTI ATGAA 9 cut(s) 24, 392, 1137, 1234, 1707, 1821, 2100, 2196, 2201
TspGWI ACGGA 1 cut(s) 2120
TspRI CASTG 3 cut(s) 298, 1072, 1557
Van91I CCANNNNNTGG 1 cut(s) 231
VpaK11BI GGWCC 1 cut(s) 872
XapI RAATTY 6 cut(s) 277, 505, 1423, 1592, 1636, 1694
XceI RCATGY 2 cut(s) 1122, 1394
XmiI GTMKAC 1 cut(s) 2245
XmnI GAANNNNTTC 1 cut(s) 1592
XspI CTAG 7 cut(s) 299, 542, 876, 1058, 1685, 2039, 2192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.