Rorug05G0462500

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
63718117 .. 63723392
5276 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0462500.1

Sequence Viewer

Length: 3555 bp
ATGGCCTTGAGCACCGAAAGAGCATCTGGATCTCGTCCTTCATCATCAGCTGAATCATCTGCTCCTCGGAGGAAGTATGATGTTTTTCTGAGTTTCAGGGGTGTAGACACTCGCAGGACTACTGCCTCCTCTATCTATCATGAATTGCAAAAAAGAGACATTAAAACGTTCATGGATGATACAGGGCTTGAAACAGGGGAGCCGATTTCTCCTAGTCTGCTAACAGCAATCAAAGAATCCTGGTCAGCGATCGTTGTCCTGTCACCAAACTATGCTTCTTCATCATGGTGTTTGCATGAACTGACAATGATTATTGAATGCATGGAAGACAAGAACATGATAGTTCTCCCAATTTTTTACGGCATCGATCCCTCTGATGTGAGATATCAGAAAACGAGTTTTGGAGAAGCATTAACTAGCCACGAAAAATGGCTTCGGGTAGAGGCTGTGAATCGGTGGAGAGCTGCTTTAACAAAAGTTGCCAATCTCTCTGGGTTGGAATCAAAAAAATATGGGTCTGATCAAGAACTTGTTAAAAAGATTGTGGAAACTGTGTGCAGTAAAGTGCGACCTATTAATATAGAGTGGGCAATGTGCACCGGAGATTTTGTTGCATTTGAAGCAACAAAACGAGCCATGGACAAGATAATGAGAGCACTTCAACATGATGAGGTCACGACCATTGGAGTCTTCGGAATGGGAGGCGTAGGCAAGACAAGCATGGTGAAACATGTCGCTGCACAGGCCCGGAAAATTGGGCTTTTTAATCGTGTGATTATGGCTGTTGTATCCCAAACACCCAACTTGAGAAATATTCAAGGCACACTGGCCGATCTGCTGGGCTTAAAATTGCAGGAGGAGACTAATGTTGGAAGAGCCACTAGAATAGTGGCGGAGATATTGAGAGGATATAAGATCCTGATAATCTTGGACGACATTTGGGAGAGAATAGAATTGTCTAGTATCGGAATACCGAACCATACAGAGCTTCAAAGGTGCCAATCAAAGATCCTACTCACCACAAGGAGACGGAATGTCTGCCATTCCATGTTGAGCCAAGCAAGCATTCCTCTCCGACTCTTGACAGAAGATGATGCCTGGAAACTGTTTATGATGAAAGCAAGAAAGTCTTTTGATGAATCAACAGACTTCTATTACGTAGCCAGGACGGTGGCTAAAGAATGTGCTGGTCTCCCGCTTGCATTGGAAGCAGTTGCAAGGGCACTTGGAGATAAGGACTTAGATGATTGGACAGAAGCAGCTCGACGACTAAAGGCTGCTCAACCTGCCAACTATGAAGATGAGAGAGAGGTGTTCAGATGTATAAAGTTAAGCTATGATTACTTGAAACCTGATGATGACAACATTGCCAAGTCATTCTTCTTGCTTTGCTGTCTATTCCCTGAAGATTTTGATATCGAGATCGAAGACTTGTTGGTGTATGCAATGGGGAAAGGTATATTTCAAGATGCCCACACAATACAAGAAGCCAGAGCCAAAGCCCATTCGGTGGTCAATTACCTGAAAGCTTCTAGCTTGCTTTTGGACGGTGCATACCCCGGATTCGTGAAGATGCATGATGTCATTCGAGATGTGGCCATATCAATTTCATCATCGGAAGATGGCCCACGGTTTTTGGTTAAAGCTGGTTGTGAATTAAGGGATTGGCCAGCGATTAATATTGCACATGAAGGCTACTCTGCAATCTCGCTAATGAGGAATGAAATTCACGAGCTTCCCAAAACGTTGGTATGTTCAAAACTCCAGATTTTATTACTACAGAGCAATAGTATAAATGAGATTCCAAACCCTTTCTTTCAAAGTCCCAATGAATTGAGGGTCTTAGATCTCAGTGAGACTAGTATTTCGTGTCTACCCTCATCATCAAGTCTTCTAACCAACCTCCAAGCTTTGTATTTAGATGAATGCAAGAGAATAGTTGATATATCCATGCTCGGAAAACTGAAGAACCTTCAGATTCTTAGTATGAAGAACCTTGACATTATTAATACGGGAGGAACTCGTCAGAAAGCATTGCCCAAAGAAATAGGATGCTTAACCAAGCTTAAGATGTTGGATGTTACAGATGCATGTTTTGAAACAGTTCCATCTAAAGTGATATCAAACTTGAATGGATTAGAAGAATTGTACATGAAATGTGACTTTTGTGACTGGGGCAGTATAATAGTTGAGGGCAGTAGTTTATTTTCTTCTGTTTTTGGCCCTGCCAAGAATGCTAGCTTTGATGAGTTAACAGGCTTATCACGCTTAAACAGTTTGAAAGTTCACATATCTGATGTAGAATGCTTGCCCCGAAAAGTTAGATTCAATCCCAATTGGGTCAACTTTGATATATGTATCAGCAGAAAAGAATTTATGAGACAGTCCTATTACGGACGCTTTTTCGAGAGGAAACTAACTGTCAAATCGGATCCACGCCAACATCTCTTTCGGTATGTGACTCTAAACACAAGCACGGAGAGTTTACCAGATTGGTTTATCGAGGTGGTGACAGAGAAAGCAGAGATACTGGAGTACATAGGGTACAGTGGCTTAGACGACATTCTTGTGGAATACGACCATGGGAGATTACATGTGCTGAAGTGTCTTGCTGTAATTGAGTGCCGTATGTATGGAGAGTTGATGAAGTCAGGAAGAAGGGTTCTAAATAAACCTGTGTTTGAGAGCTTGGAAGAGTTGTATCTAGAAGGGGTCCGTGGCCTGCGGTGGTTATGTGTTGCTGAGTTACCACCTGGGTCTCTGTGCAATCTAAAGTTGTTAAATGTGAGAAATTGCCTGGCATTGGAGGGTGCACTTTTACGGTCAAATTTGTTGAAAAGGCTACAAAATCTGGAAATACTACATTGTGAGAACACGGAGGAATCGAGAGAAACCAAATTGGAATATGTGTTTGGATTTGGATTGGTGGGAGATACTGACTTACCAAAGTTGAGAGAGATAACATTATGTTATCTTAGGAACCTAAGAAGCATATGCATTGATTATGGAGTCTTCCTTAATCTCAACAGTCTGGCAATTCGTGGCTGCCATGGGCTGTCAAGTCTGTTGCCGTCCAATGTAGCTCAATCTCTTTTCCAATTGGAACTCCTTTGGGTGGAGGAGTGTCCTTCCTTGGAAACAGTTATTAAACTAAGCTCGGGAACAGAGATCAGCGACCTAGTTTTTCCAAAATTGAAGGAAATATATTTAAATAGACTTCCACATCTCACATCGATCTACAGAAGCGATGTTGTGTGCCCTTCATTGGAACACTTGTACGTGTACAGTTGCCCCGGACTTTCAAACCTTTCTGCTTCTGACTTCCAAAGCAAGAACCACGTCGAAGCCAATAATGAAGGACATTTTGCGATTATATTTGAAAGGTATGATCCTATATCAAAAGATTGTTCCACCGCCAATTCAATCCAGAAGAGTTTCCTCAGTTCTTCTCCAAAAAATAAAGAGATTTCTCAATTGGCTCATAAATGCCGCCTAGGCGCTGGGCGGCAGCAGACTGAGGCGAGTAGTGGCAAATCGGAAGCCTTAGGCAGATAG

Protein Analysis

1184

Amino Acids

133.3

Weight (kDa)

6.42

Isoelectric Point (pI)

50.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 25 - 190 6.1e-51 TIR domain
TIR_2 PF13676 28 - 124 1.3e-13 TIR domain
NB-ARC PF00931 211 - 375 1.4e-30 NB-ARC domain
LRR_14 PF23598 587 - 666 2.8e-06 Leucine-rich repeat region
LRR_8 PF13855 587 - 643 2e-08 Leucine rich repeat
LRR_RPS2 PF23247 910 - 1042 2.7e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1004 - 1103 2.7e-14 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1294
AccB1I GGYRCC 1 cut(s) 996
AccB7I CCANNNNNTGG 1 cut(s) 1510
AccI GTMKAC 2 cut(s) 105, 1873
AciI CCGC 6 cut(s) 893, 1196, 2725, 3414, 3490, 3505
AclI AACGTT 2 cut(s) 167, 1745
AclWI GGATC 7 cut(s) 37, 362, 910, 1003, 2426, 2439, 3383
AcoI YGGCCR 3 cut(s) 828, 1596, 1667
AcsI RAATTY 3 cut(s) 1725, 2372, 2827
AcuI CTGAAG 4 cut(s) 1425, 1958, 1985, 2621
AfaI GTAC 5 cut(s) 2150, 2537, 2546, 3278, 3284
AfiI CCNNNNNNNGG 4 cut(s) 1510, 2803, 3115, 3265
AflII CTTAAG 1 cut(s) 2066
AflIII ACRYGT 3 cut(s) 730, 2593, 3279
AhdI GACNNNNNGTC 1 cut(s) 1034
AhlI ACTAGT 1 cut(s) 1859
AjiI CACGTC 1 cut(s) 3340
AjnI CCWGG 5 cut(s) 239, 1097, 1163, 2752, 2796
AloI GAACNNNNNNTCC 2 cut(s) 2646, 2678
Alw21I GWGCWC 4 cut(s) 14, 599, 658, 2815
Alw26I GTCTC 7 cut(s) 150, 854, 1021, 1196, 1850, 2374, 2763
Alw44I GTGCAC 2 cut(s) 595, 2811
AlwI GGATC 7 cut(s) 37, 362, 910, 1003, 2426, 2439, 3383
Ama87I CYCGRG 1 cut(s) 3157
AoxI GGCC 8 cut(s) 3, 744, 828, 1596, 1624, 1667, 2221, 2719
ApaLI GTGCAC 2 cut(s) 595, 2811
ApeKI GCWGC 6 cut(s) 464, 737, 1259, 1277, 3045, 3508
ApoI RAATTY 3 cut(s) 1725, 2372, 2827
ArsI GACNNNNNNTTYG 2 cut(s) 1849, 1881
AseI ATTAAT 3 cut(s) 576, 1677, 2007
Asp700I GAANNNNTTC 2 cut(s) 2103, 3434
AspA2I CCTAGG 1 cut(s) 3493
AspLEI GCGC 1 cut(s) 3500
AspS9I GGNCC 4 cut(s) 745, 1625, 2222, 2713
AsuC2I CCSGG 3 cut(s) 748, 1560, 3294
AsuHPI GGTGA 4 cut(s) 255, 736, 1009, 2521
AsuNHI GCTAGC 1 cut(s) 2237
AvaI CYCGRG 1 cut(s) 3157
AvaII GGWCC 1 cut(s) 2713
AvrII CCTAGG 1 cut(s) 3493
AxyI CCTNAGG 1 cut(s) 3544
BaeGI GKGCMC 4 cut(s) 599, 1225, 2815, 3260
BaeI ACNNNNGTAYC 2 cut(s) 2519, 2552
BalI TGGCCA 2 cut(s) 1598, 1669
BamHI GGATCC 1 cut(s) 2431
BanI GGYRCC 1 cut(s) 996
BauI CACGAG 1 cut(s) 1730
BbsI GAAGAC 5 cut(s) 333, 682, 1434, 1883, 3004
Bbv12I GWGCWC 4 cut(s) 14, 599, 658, 2815
BbvI GCAGC 6 cut(s) 451, 724, 1264, 1271, 3032, 3520
BccI CCATC 2 cut(s) 1616, 2116
BceAI ACGGC 3 cut(s) 376, 2610, 3055
BciT130I CCWGG 5 cut(s) 241, 1099, 1165, 2754, 2798
BciVI GTATCC 1 cut(s) 799
BclI TGATCA 1 cut(s) 520
BcnI CCSGG 3 cut(s) 748, 1560, 3294
BcoDI GTCTC 7 cut(s) 150, 854, 1021, 1196, 1850, 2374, 2763
BcuI ACTAGT 1 cut(s) 1859
BfmI CTRYAG 2 cut(s) 1778, 3238
BfoI RGCGCY 1 cut(s) 3501
BfrI CTTAAG 1 cut(s) 2066
BfuAI ACCTGC 1 cut(s) 1294
BfuI GTATCC 1 cut(s) 799
BglI GCCNNNNNGGC 1 cut(s) 3495
BglII AGATCT 1 cut(s) 1846
BisI GCNGC 8 cut(s) 465, 738, 1260, 1278, 3046, 3490, 3506, 3509
BlnI CCTAGG 1 cut(s) 3493
BlsI GCNGC 8 cut(s) 466, 739, 1261, 1279, 3047, 3491, 3507, 3510
Bme1390I CCNGG 8 cut(s) 241, 748, 1099, 1165, 1560, 2754, 2798, 3294
Bme18I GGWCC 1 cut(s) 2713
BmeRI GACNNNNNGTC 1 cut(s) 1034
BmeT110I CYCGRG 1 cut(s) 3157
BmgBI CACGTC 1 cut(s) 3340
BmgT120I GGNCC 4 cut(s) 745, 1625, 2222, 2713
BmiI GGNNCC 5 cut(s) 201, 998, 2433, 2714, 2981
BmrFI CCNGG 8 cut(s) 241, 748, 1099, 1165, 1560, 2754, 2798, 3294
BmrI ACTGGG 1 cut(s) 2182
BmsI GCATC 7 cut(s) 32, 372, 1084, 1459, 1563, 2042, 2077
BmtI GCTAGC 1 cut(s) 2241
BmuI ACTGGG 1 cut(s) 2182
BpiI GAAGAC 5 cut(s) 333, 682, 1434, 1883, 3004
BpmI CTGGAG 2 cut(s) 1748, 2552
BpuEI CTTGAG 2 cut(s) 28, 826
BpuMI CCSGG 3 cut(s) 748, 1560, 3294
Bsa29I ATCGAT 2 cut(s) 366, 3233
BsaAI YACGTR 2 cut(s) 1159, 3280
BsaI GGTCTC 2 cut(s) 1196, 2763
BsaWI WCCGGW 1 cut(s) 599
BsaXI ACNNNNNCTCC 2 cut(s) 594, 624
Bsc4I CCNNNNNNNGG 4 cut(s) 1510, 2803, 3115, 3265
Bse1I ACTGG 3 cut(s) 831, 2177, 2535
Bse21I CCTNAGG 1 cut(s) 3544
Bse3DI GCAATG 4 cut(s) 597, 1365, 1452, 2033
BseBI CCWGG 5 cut(s) 241, 1099, 1165, 2754, 2798
BseCI ATCGAT 2 cut(s) 366, 3233
BseGI GGATG 3 cut(s) 181, 2057, 2083
BseLI CCNNNNNNNGG 4 cut(s) 1510, 2803, 3115, 3265
BseMI GCAATG 4 cut(s) 597, 1365, 1452, 2033
BseMII CTCAG 5 cut(s) 80, 1864, 2733, 3454, 3507
BseNI ACTGG 3 cut(s) 831, 2177, 2535
BseRI GAGGAG 4 cut(s) 54, 118, 872, 3134
BseSI GKGCMC 4 cut(s) 599, 1225, 2815, 3260
BseXI GCAGC 6 cut(s) 451, 724, 1264, 1271, 3032, 3520
BseYI CCCAGC 2 cut(s) 838, 3500
BsgI GTGCAG 2 cut(s) 577, 723
Bsh1285I CGRYCG 1 cut(s) 252
BshFI GGCC 8 cut(s) 5, 746, 830, 1598, 1626, 1669, 2223, 2721
BshNI GGYRCC 1 cut(s) 996
BshVI ATCGAT 2 cut(s) 366, 3233
BsiEI CGRYCG 1 cut(s) 252
BsiHKAI GWGCWC 4 cut(s) 14, 599, 658, 2815
BsiHKCI CYCGRG 1 cut(s) 3157
BsiSI CCGG 4 cut(s) 600, 748, 1560, 3294
BslFI GGGAC 1 cut(s) 1809
BslI CCNNNNNNNGG 4 cut(s) 1510, 2803, 3115, 3265
BsmAI GTCTC 7 cut(s) 150, 854, 1021, 1196, 1850, 2374, 2763
BsmBI CGTCTC 1 cut(s) 1021
BsmFI GGGAC 1 cut(s) 1809
BsmI GAATGC 5 cut(s) 323, 1065, 1931, 2239, 2309
BsnI GGCC 8 cut(s) 5, 746, 830, 1598, 1626, 1669, 2223, 2721
Bso31I GGTCTC 2 cut(s) 1196, 2763
BsoBI CYCGRG 1 cut(s) 3157
Bsp1286I GDGCHC 6 cut(s) 14, 599, 658, 1225, 2815, 3260
Bsp1407I TGTACA 2 cut(s) 2148, 3282
Bsp19I CCATGG 3 cut(s) 636, 2581, 3049
BspACI CCGC 6 cut(s) 893, 1196, 2725, 3414, 3490, 3505
BspANI GGCC 8 cut(s) 5, 746, 830, 1598, 1626, 1669, 2223, 2721
BspCNI CTCAG 5 cut(s) 81, 1863, 2734, 3453, 3508
BspDI ATCGAT 2 cut(s) 366, 3233
BspHI TCATGA 1 cut(s) 139
BspLI GGNNCC 5 cut(s) 201, 998, 2433, 2714, 2981
BspMI ACCTGC 1 cut(s) 1294
BspOI GCTAGC 1 cut(s) 2241
BspPI GGATC 7 cut(s) 37, 362, 910, 1003, 2426, 2439, 3383
BspQI GCTCTTC 1 cut(s) 868
BspT107I GGYRCC 1 cut(s) 996
BspTI CTTAAG 1 cut(s) 2066
BspTNI GGTCTC 2 cut(s) 1196, 2763
BsrDI GCAATG 4 cut(s) 597, 1365, 1452, 2033
BsrGI TGTACA 2 cut(s) 2148, 3282
BsrI ACTGG 3 cut(s) 831, 2177, 2535
BssSI CACGAG 1 cut(s) 1730
BssT1I CCWWGG 5 cut(s) 636, 2581, 3049, 3132, 3493
Bst2BI CACGAG 1 cut(s) 1730
Bst2UI CCWGG 5 cut(s) 241, 1099, 1165, 2754, 2798
Bst6I CTCTTC 3 cut(s) 868, 2688, 3425
BstAFI CTTAAG 1 cut(s) 2066
BstAUI TGTACA 2 cut(s) 2148, 3282
BstBAI YACGTR 2 cut(s) 1159, 3280
BstC8I GCNNGC 7 cut(s) 1063, 1200, 1538, 1671, 2239, 2309, 2723
BstDSI CCRYGG 5 cut(s) 636, 1628, 2581, 2716, 3049
BstF5I GGATG 3 cut(s) 181, 2057, 2083
BstH2I RGCGCY 1 cut(s) 3501
BstHHI GCGC 1 cut(s) 3500
BstMAI GTCTC 7 cut(s) 150, 854, 1021, 1196, 1850, 2374, 2763
BstMCI CGRYCG 1 cut(s) 252
BstMWI GCNNNNNNNGC 9 cut(s) 620, 717, 743, 1062, 1208, 1286, 2234, 2265, 3495
BstNI CCWGG 5 cut(s) 241, 1099, 1165, 2754, 2798
BstNSI RCATGY 3 cut(s) 734, 2094, 2597
BstSCI CCNGG 8 cut(s) 239, 746, 1097, 1163, 1558, 2752, 2796, 3292
BstSFI CTRYAG 2 cut(s) 1778, 3238
BstSLI GKGCMC 4 cut(s) 599, 1225, 2815, 3260
BstSNI TACGTA 1 cut(s) 1159
BstV1I GCAGC 6 cut(s) 451, 724, 1264, 1271, 3032, 3520
BstV2I GAAGAC 5 cut(s) 333, 682, 1434, 1883, 3004
BstX2I RGATCY 5 cut(s) 29, 915, 1008, 1846, 2431
BstXI CCANNNNNNTGG 2 cut(s) 1171, 1747
BstYI RGATCY 5 cut(s) 29, 915, 1008, 1846, 2431
Bsu15I ATCGAT 2 cut(s) 366, 3233
Bsu36I CCTNAGG 1 cut(s) 3544
BsuI GTATCC 1 cut(s) 799
BsuRI GGCC 8 cut(s) 5, 746, 830, 1598, 1626, 1669, 2223, 2721
BsuTUI ATCGAT 2 cut(s) 366, 3233
BtgI CCRYGG 5 cut(s) 636, 1628, 2581, 2716, 3049
BtgZI GCGATG 1 cut(s) 3261
BtrI CACGTC 1 cut(s) 3340
BtsCI GGATG 3 cut(s) 181, 2057, 2083
BtsIMutI CAGTG 3 cut(s) 824, 1858, 2554
BveI ACCTGC 1 cut(s) 1294
Cac8I GCNNGC 7 cut(s) 1063, 1200, 1538, 1671, 2239, 2309, 2723
CciI TCATGA 1 cut(s) 139
CfoI GCGC 1 cut(s) 3500
Cfr13I GGNCC 4 cut(s) 745, 1625, 2222, 2713
ClaI ATCGAT 2 cut(s) 366, 3233
CseI GACGC 1 cut(s) 2406
Csp6I GTAC 5 cut(s) 2149, 2536, 2545, 3277, 3283
CspCI CAANNNNNGTGG 2 cut(s) 1617, 1652
CviQI GTAC 5 cut(s) 2149, 2536, 2545, 3277, 3283
DraI TTTAAA 1 cut(s) 3210
DriI GACNNNNNGTC 1 cut(s) 1034
EaeI YGGCCR 3 cut(s) 828, 1596, 1667
Eam1104I CTCTTC 3 cut(s) 868, 2688, 3425
Eam1105I GACNNNNNGTC 1 cut(s) 1034
EarI CTCTTC 3 cut(s) 868, 2688, 3425
EciI GGCGGA 1 cut(s) 908
Eco105I TACGTA 1 cut(s) 1159
Eco130I CCWWGG 5 cut(s) 636, 2581, 3049, 3132, 3493
Eco31I GGTCTC 2 cut(s) 1196, 2763
Eco32I GATATC 3 cut(s) 386, 1417, 2121
Eco47I GGWCC 1 cut(s) 2713
Eco57I CTGAAG 4 cut(s) 1425, 1958, 1985, 2621
Eco81I CCTNAGG 1 cut(s) 3544
Eco88I CYCGRG 1 cut(s) 3157
EcoRII CCWGG 5 cut(s) 239, 1097, 1163, 2752, 2796
EcoRV GATATC 3 cut(s) 386, 1417, 2121
EcoT14I CCWWGG 5 cut(s) 636, 2581, 3049, 3132, 3493
EcoT22I ATGCAT 4 cut(s) 323, 1578, 2092, 2999
ErhI CCWWGG 5 cut(s) 636, 2581, 3049, 3132, 3493
Esp3I CGTCTC 1 cut(s) 1021
FalI AAGNNNNNCTT 4 cut(s) 1114, 1146, 1364, 1396
FaqI GGGAC 1 cut(s) 1809
FauI CCCGC 1 cut(s) 1203
FauNDI CATATG 1 cut(s) 2993
FbaI TGATCA 1 cut(s) 520
FblI GTMKAC 2 cut(s) 105, 1873
Fnu4HI GCNGC 8 cut(s) 465, 738, 1260, 1278, 3046, 3490, 3506, 3509
FokI GGATG 3 cut(s) 188, 2064, 2090
Fsp4HI GCNGC 8 cut(s) 465, 738, 1260, 1278, 3046, 3490, 3506, 3509
GlaI GCGC 1 cut(s) 3499
GluI GCNGC 8 cut(s) 465, 738, 1260, 1278, 3046, 3490, 3506, 3509
GsaI CCCAGC 2 cut(s) 842, 3504
GsuI CTGGAG 2 cut(s) 1748, 2552
HaeII RGCGCY 1 cut(s) 3501
HaeIII GGCC 8 cut(s) 5, 746, 830, 1598, 1626, 1669, 2223, 2721
HapII CCGG 4 cut(s) 600, 748, 1560, 3294
HgaI GACGC 1 cut(s) 2406
HhaI GCGC 1 cut(s) 3500
Hin6I GCGC 1 cut(s) 3498
HinP1I GCGC 1 cut(s) 3498
HincII GTYRAC 2 cut(s) 2253, 2344
HindII GTYRAC 2 cut(s) 2253, 2344
HindIII AAGCTT 3 cut(s) 1527, 1908, 2063
HpaI GTTAAC 1 cut(s) 2253
HpaII CCGG 4 cut(s) 600, 748, 1560, 3294
HphI GGTGA 4 cut(s) 255, 736, 1009, 2521
Hpy166II GTNNAC 9 cut(s) 106, 597, 1874, 2253, 2287, 2344, 2486, 2813, 3283
Hpy8I GTNNAC 9 cut(s) 106, 597, 1874, 2253, 2287, 2344, 2486, 2813, 3283
Hpy99I CGWCG 2 cut(s) 1269, 3344
HpyAV CCTTC 9 cut(s) 48, 1685, 1982, 2652, 2702, 3138, 3190, 3270, 3350
HpyCH4IV ACGT 5 cut(s) 167, 1158, 1745, 3279, 3339
HpyF10VI GCNNNNNNNGC 9 cut(s) 620, 717, 743, 1062, 1208, 1286, 2234, 2265, 3495
HpySE526I ACGT 5 cut(s) 167, 1158, 1745, 3279, 3339
HspAI GCGC 1 cut(s) 3498
Ksp22I TGATCA 1 cut(s) 520
KspAI GTTAAC 1 cut(s) 2253
LguI GCTCTTC 1 cut(s) 868
LmnI GCTCC 2 cut(s) 67, 199
Lsp1109I GCAGC 6 cut(s) 451, 724, 1264, 1271, 3032, 3520
LweI GCATC 7 cut(s) 32, 372, 1084, 1459, 1563, 2042, 2077
MaeII ACGT 5 cut(s) 167, 1158, 1745, 3279, 3339
MaeIII GTNAC 8 cut(s) 261, 673, 2080, 2159, 2168, 2458, 2509, 2745
MfeI CAATTG 3 cut(s) 2335, 3098, 3473
MflI RGATCY 5 cut(s) 29, 915, 1008, 1846, 2431
MhlI GDGCHC 6 cut(s) 14, 599, 658, 1225, 2815, 3260
MlsI TGGCCA 2 cut(s) 1598, 1669
MluNI TGGCCA 2 cut(s) 1598, 1669
MlyI GAGTC 4 cut(s) 696, 1071, 2455, 3018
MmeI TCCRAC 4 cut(s) 477, 850, 1099, 2055
Mox20I TGGCCA 2 cut(s) 1598, 1669
Mph1103I ATGCAT 4 cut(s) 323, 1578, 2092, 2999
MroXI GAANNNNTTC 2 cut(s) 2103, 3434
MscI TGGCCA 2 cut(s) 1598, 1669
MslI CAYNNNNRTG 2 cut(s) 286, 2567
Msp20I TGGCCA 2 cut(s) 1598, 1669
MspA1I CMGCKG 1 cut(s) 50
MspCI CTTAAG 1 cut(s) 2066
MspI CCGG 4 cut(s) 600, 748, 1560, 3294
MspR9I CCNGG 8 cut(s) 241, 748, 1099, 1165, 1560, 2754, 2798, 3294
MunI CAATTG 3 cut(s) 2335, 3098, 3473
Mva1269I GAATGC 5 cut(s) 323, 1065, 1931, 2239, 2309
MvaI CCWGG 5 cut(s) 241, 1099, 1165, 2754, 2798
MwoI GCNNNNNNNGC 9 cut(s) 620, 717, 743, 1062, 1208, 1286, 2234, 2265, 3495
NciI CCSGG 3 cut(s) 748, 1560, 3294
NcoI CCATGG 3 cut(s) 636, 2581, 3049
NdeI CATATG 1 cut(s) 2993
NheI GCTAGC 1 cut(s) 2237
NlaIV GGNNCC 5 cut(s) 201, 998, 2433, 2714, 2981
NmuCI GTSAC 6 cut(s) 261, 673, 2159, 2168, 2458, 2509
NsiI ATGCAT 4 cut(s) 323, 1578, 2092, 2999
NspI RCATGY 3 cut(s) 734, 2094, 2597
PagI TCATGA 1 cut(s) 139
PciI ACATGT 2 cut(s) 730, 2593
PciSI GCTCTTC 1 cut(s) 868
PcsI WCGNNNNNNNCGW 1 cut(s) 2882
PctI GAATGC 5 cut(s) 323, 1065, 1931, 2239, 2309
PdmI GAANNNNTTC 2 cut(s) 2103, 3434
PflMI CCANNNNNTGG 1 cut(s) 1510
PkrI GCNGC 8 cut(s) 466, 739, 1261, 1279, 3047, 3491, 3507, 3510
Ple19I CGATCG 1 cut(s) 252
PleI GAGTC 4 cut(s) 695, 1071, 2455, 3017
PpsI GAGTC 4 cut(s) 695, 1071, 2455, 3017
Ppu21I YACGTR 2 cut(s) 1159, 3280
PscI ACATGT 2 cut(s) 730, 2593
PshBI ATTAAT 3 cut(s) 576, 1677, 2007
Psp1406I AACGTT 2 cut(s) 167, 1745
Psp6I CCWGG 5 cut(s) 239, 1097, 1163, 2752, 2796
PspFI CCCAGC 2 cut(s) 838, 3500
PspGI CCWGG 5 cut(s) 239, 1097, 1163, 2752, 2796
PspN4I GGNNCC 5 cut(s) 201, 998, 2433, 2714, 2981
PspPI GGNCC 4 cut(s) 745, 1625, 2222, 2713
PsuI RGATCY 5 cut(s) 29, 915, 1008, 1846, 2431
PvuI CGATCG 1 cut(s) 252
PvuII CAGCTG 1 cut(s) 50
RsaI GTAC 5 cut(s) 2150, 2537, 2546, 3278, 3284
RsaNI GTAC 5 cut(s) 2149, 2536, 2545, 3277, 3283
RseI CAYNNNNRTG 2 cut(s) 286, 2567
SapI GCTCTTC 1 cut(s) 868
SatI GCNGC 8 cut(s) 465, 738, 1260, 1278, 3046, 3490, 3506, 3509
Sau96I GGNCC 4 cut(s) 745, 1625, 2222, 2713
SchI GAGTC 4 cut(s) 696, 1071, 2455, 3018
ScrFI CCNGG 8 cut(s) 241, 748, 1099, 1165, 1560, 2754, 2798, 3294
SduI GDGCHC 6 cut(s) 14, 599, 658, 1225, 2815, 3260
SfaNI GCATC 7 cut(s) 32, 372, 1084, 1459, 1563, 2042, 2077
SfcI CTRYAG 2 cut(s) 1778, 3238
SinI GGWCC 1 cut(s) 2713
SmiI ATTTAAAT 1 cut(s) 3210
SmiMI CAYNNNNRTG 2 cut(s) 286, 2567
SmlI CTYRAG 3 cut(s) 7, 805, 2066
SmoI CTYRAG 3 cut(s) 7, 805, 2066
SnaBI TACGTA 1 cut(s) 1159
SpeI ACTAGT 1 cut(s) 1859
SsiI CCGC 6 cut(s) 893, 1196, 2725, 3414, 3490, 3505
SspI AATATT 2 cut(s) 814, 1681
StyD4I CCNGG 8 cut(s) 239, 746, 1097, 1163, 1558, 2752, 2796, 3292
StyI CCWWGG 5 cut(s) 636, 2581, 3049, 3132, 3493
SwaI ATTTAAAT 1 cut(s) 3210
TaiI ACGT 5 cut(s) 170, 1161, 1748, 3282, 3342
TatI WGTACW 3 cut(s) 2148, 2535, 3282
TauI GCSGC 2 cut(s) 3492, 3508
TscAI CASTG 3 cut(s) 831, 1858, 2554
TseFI GTSAC 6 cut(s) 261, 673, 2159, 2168, 2458, 2509
TseI GCWGC 6 cut(s) 464, 737, 1259, 1277, 3045, 3508
Tsp45I GTSAC 6 cut(s) 261, 673, 2159, 2168, 2458, 2509
TspGWI ACGGA 5 cut(s) 1045, 2409, 2492, 2705, 2891
TspRI CASTG 3 cut(s) 831, 1858, 2554
Van91I CCANNNNNTGG 1 cut(s) 1510
Vha464I CTTAAG 1 cut(s) 2066
VneI GTGCAC 2 cut(s) 595, 2811
VpaK11BI GGWCC 1 cut(s) 2713
VspI ATTAAT 3 cut(s) 576, 1677, 2007
XapI RAATTY 3 cut(s) 1725, 2372, 2827
XbaI TCTAGA 1 cut(s) 2704
XceI RCATGY 3 cut(s) 734, 2094, 2597
XcmI CCANNNNNNNNNTGG 1 cut(s) 886
XmaJI CCTAGG 1 cut(s) 3493
XmiI GTMKAC 2 cut(s) 105, 1873
XmnI GAANNNNTTC 2 cut(s) 2103, 3434
Zsp2I ATGCAT 4 cut(s) 323, 1578, 2092, 2999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.