RLG00000036803

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
84785036 .. 84785808
773 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036803

Sequence Viewer

Length: 702 bp
ATGGAGCTAAAAGAAGCCACCAACGGATTCAAGGAAGAGTTGGGTCGTGGTGCTTTTGCAACAGTTTTCAAAGGAGTTTTAGCATCTGATACTGGGAAGTACATTGCTGTCAAAAGATTGAACGTTGTGGTCAAAGAAAATGATTTGGAATTCAAAGCTGAAGGGCAACACCAGCTTCTTGTGTATGAGTACATGAGCAATGGCTCTCTAGCAACCTTCCTCTTCGGAGAGTCAAGACCAAACTGGAATACAAGAAAAAAAATTGCCTTGGGAACTGCAAGAGGGCTCTTGTATTTGCATGAGGAGTGCAGCAGCCAAATCATACATTGTGATATTAAGCCTCAAAACATTCTTCTCGATGATTCTTTCATAGCAAGAATAGCAGACTTTGGGGTATGCAAGCTTTTGAAATCTGACCAAACTCGAACAACTACGAGAATCAGAGGCACAAAAGGTTATGTTGCTCCTGAATGGTTCAAAAGTTTGCCTGTCACAGTGAAGGTTGATGTTTACAGCTACGGCATGGTGTTGTTGGAGATCGTTTGCTGCAGGAAAAACTATGAACCAGAAGCACCAGCTGAAGATCAAATGATATTAGCTGATTGGGCATACCATTGCTATAAGCAAAAGAAACTGCATGTGTTGTGGCAGAATGTAGGCGACGATCAGGAAATGGATGGCATCGAAAAGTTGGAGATTTGA

Protein Analysis

234

Amino Acids

26.52

Weight (kDa)

6.24

Isoelectric Point (pI)

25.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 53 - 194 5.1e-32 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 54 - 188 2e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 123
AcsI RAATTY 1 cut(s) 149
AcuI CTGAAG 2 cut(s) 180, 600
AfaI GTAC 2 cut(s) 101, 191
AgsI TTSAA 6 cut(s) 31, 70, 121, 154, 409, 478
AluBI AGCT 7 cut(s) 7, 158, 175, 403, 516, 578, 599
AluI AGCT 7 cut(s) 7, 158, 175, 403, 516, 578, 599
ApeKI GCWGC 3 cut(s) 309, 312, 546
ApoI RAATTY 1 cut(s) 149
BanII GRGCYC 1 cut(s) 288
BbvI GCAGC 3 cut(s) 321, 324, 533
BccI CCATC 1 cut(s) 671
BceAI ACGGC 1 cut(s) 535
BfaI CTAG 1 cut(s) 209
BfmI CTRYAG 1 cut(s) 547
BisI GCNGC 3 cut(s) 310, 313, 547
BlsI GCNGC 3 cut(s) 311, 314, 548
BmrI ACTGGG 1 cut(s) 102
BmsI GCATC 2 cut(s) 92, 690
BmuI ACTGGG 1 cut(s) 102
BsaJI CCNNGG 1 cut(s) 267
Bse1I ACTGG 2 cut(s) 97, 248
Bse3DI GCAATG 3 cut(s) 102, 205, 613
BseDI CCNNGG 1 cut(s) 267
BseGI GGATG 1 cut(s) 682
BseMI GCAATG 3 cut(s) 102, 205, 613
BseNI ACTGG 2 cut(s) 97, 248
BseRI GAGGAG 1 cut(s) 317
BseXI GCAGC 3 cut(s) 321, 324, 533
BsgI GTGCAG 1 cut(s) 328
Bsp1286I GDGCHC 1 cut(s) 288
Bsp143I GATC 3 cut(s) 537, 583, 664
BspMAI CTGCAG 1 cut(s) 551
BsrDI GCAATG 3 cut(s) 102, 205, 613
BsrI ACTGG 2 cut(s) 97, 248
BssECI CCNNGG 1 cut(s) 267
BssMI GATC 3 cut(s) 537, 583, 664
BssT1I CCWWGG 1 cut(s) 267
Bst4CI ACNGT 2 cut(s) 64, 496
Bst6I CTCTTC 2 cut(s) 30, 227
BstC8I GCNNGC 1 cut(s) 401
BstF5I GGATG 1 cut(s) 682
BstKTI GATC 3 cut(s) 540, 586, 667
BstMBI GATC 3 cut(s) 537, 583, 664
BstMWI GCNNNNNNNGC 3 cut(s) 172, 380, 605
BstNSI RCATGY 1 cut(s) 641
BstSFI CTRYAG 1 cut(s) 547
BstV1I GCAGC 3 cut(s) 321, 324, 533
BtsCI GGATG 1 cut(s) 682
BtsIMutI CAGTG 1 cut(s) 501
Cac8I GCNNGC 1 cut(s) 401
Csp6I GTAC 2 cut(s) 100, 190
CviAII CATG 4 cut(s) 193, 299, 523, 638
CviQI GTAC 2 cut(s) 100, 190
DpnI GATC 3 cut(s) 539, 585, 666
DpnII GATC 3 cut(s) 537, 583, 664
Eam1104I CTCTTC 2 cut(s) 30, 227
EarI CTCTTC 2 cut(s) 30, 227
Eco130I CCWWGG 1 cut(s) 267
Eco24I GRGCYC 1 cut(s) 288
Eco57I CTGAAG 2 cut(s) 180, 600
EcoRI GAATTC 1 cut(s) 149
EcoT14I CCWWGG 1 cut(s) 267
EcoT38I GRGCYC 1 cut(s) 288
ErhI CCWWGG 1 cut(s) 267
FaeI CATG 4 cut(s) 196, 302, 526, 641
FatI CATG 4 cut(s) 192, 298, 522, 637
Fnu4HI GCNGC 3 cut(s) 310, 313, 547
FokI GGATG 1 cut(s) 689
FriOI GRGCYC 1 cut(s) 288
Fsp4HI GCNGC 3 cut(s) 310, 313, 547
FspBI CTAG 1 cut(s) 209
GluI GCNGC 3 cut(s) 310, 313, 547
Hin1II CATG 4 cut(s) 196, 302, 526, 641
HindIII AAGCTT 1 cut(s) 401
HinfI GANTC 4 cut(s) 27, 230, 362, 438
Hpy166II GTNNAC 1 cut(s) 511
Hpy188I TCNGA 4 cut(s) 88, 227, 415, 443
Hpy188III TCNNGA 4 cut(s) 234, 356, 467, 668
Hpy8I GTNNAC 1 cut(s) 511
Hpy99I CGWCG 1 cut(s) 665
HpyAV CCTTC 3 cut(s) 155, 226, 493
HpyCH4III ACNGT 2 cut(s) 64, 496
HpyCH4IV ACGT 1 cut(s) 123
HpyCH4V TGCA 7 cut(s) 59, 278, 298, 309, 399, 549, 637
HpyF10VI GCNNNNNNNGC 3 cut(s) 172, 380, 605
HpySE526I ACGT 1 cut(s) 123
Hsp92II CATG 4 cut(s) 196, 302, 526, 641
Kzo9I GATC 3 cut(s) 537, 583, 664
LmnI GCTCC 2 cut(s) 4, 469
LpnPI CCDG 9 cut(s) 78, 185, 229, 480, 501, 535, 579, 588, 653
Lsp1109I GCAGC 3 cut(s) 321, 324, 533
LweI GCATC 2 cut(s) 92, 690
MaeI CTAG 1 cut(s) 209
MaeII ACGT 1 cut(s) 123
MaeIII GTNAC 1 cut(s) 490
MalI GATC 3 cut(s) 539, 585, 666
MboI GATC 3 cut(s) 537, 583, 664
MboII GAAGA 4 cut(s) 47, 214, 344, 593
MhlI GDGCHC 1 cut(s) 288
MluCI AATT 2 cut(s) 149, 261
MlyI GAGTC 1 cut(s) 239
MmeI TCCRAC 2 cut(s) 513, 672
MnlI CCTC 5 cut(s) 230, 275, 295, 351, 437
MseI TTAA 1 cut(s) 336
MspA1I CMGCKG 1 cut(s) 578
MwoI GCNNNNNNNGC 3 cut(s) 172, 380, 605
NdeII GATC 3 cut(s) 537, 583, 664
NlaIII CATG 4 cut(s) 196, 302, 526, 641
NmuCI GTSAC 1 cut(s) 490
NspI RCATGY 1 cut(s) 641
PfeI GAWTC 3 cut(s) 27, 362, 438
PkrI GCNGC 3 cut(s) 311, 314, 548
PleI GAGTC 1 cut(s) 238
PpsI GAGTC 1 cut(s) 238
Psp1406I AACGTT 1 cut(s) 123
PstI CTGCAG 1 cut(s) 551
PvuII CAGCTG 1 cut(s) 578
RsaI GTAC 2 cut(s) 101, 191
RsaNI GTAC 2 cut(s) 100, 190
SaqAI TTAA 1 cut(s) 336
SatI GCNGC 3 cut(s) 310, 313, 547
Sau3AI GATC 3 cut(s) 537, 583, 664
SchI GAGTC 1 cut(s) 239
SduI GDGCHC 1 cut(s) 288
SfaNI GCATC 2 cut(s) 92, 690
SfcI CTRYAG 1 cut(s) 547
Sse9I AATT 2 cut(s) 149, 261
SspMI CTAG 1 cut(s) 209
StyI CCWWGG 1 cut(s) 267
TaaI ACNGT 2 cut(s) 64, 496
TaiI ACGT 1 cut(s) 126
TaqI TCGA 3 cut(s) 357, 424, 684
TasI AATT 2 cut(s) 149, 261
TatI WGTACW 2 cut(s) 99, 189
TfiI GAWTC 3 cut(s) 27, 362, 438
Tru1I TTAA 1 cut(s) 336
Tru9I TTAA 1 cut(s) 336
TscAI CASTG 1 cut(s) 501
TseFI GTSAC 1 cut(s) 490
TseI GCWGC 3 cut(s) 309, 312, 546
Tsp45I GTSAC 1 cut(s) 490
TspDTI ATGAA 2 cut(s) 358, 576
TspGWI ACGGA 1 cut(s) 39
TspRI CASTG 1 cut(s) 501
XapI RAATTY 1 cut(s) 149
XceI RCATGY 1 cut(s) 641
XspI CTAG 1 cut(s) 209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.