MD09G1060200.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
4062332 .. 4063367
1036 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1060200.v1.1.491

Sequence Viewer

Length: 753 bp
ATGTACAATATGAATGGTTTCCCGGGCACAGGCGCCCCCAGAACAGGTGGACTTGATAAATATTTTTTTATGCTTTCAAAATCTCAGGGTGGAGAGACATGGAAATCCGAAATAACCTTGGGGACTGTTGCGAACGGGGTCATGAATGACACCGGAAACTTTGTCCTTCAACACCAAAACTCTCGGAGCTTGTGGGAGACCTTCAGCAATCCTACAGACACCATTTTGCCTGGACAGACAATTGAGAGAAATGGGACGCTTTCGTGTAGACAATCGGAGACTAACTACACAAAAGGGCGGTTCCAGCTGCGCTTGCAAGGTGATGGAAACCTCGTGCTCAACACCGTCAACTTGACAACAGATAATGCCAACTTCCCTTACTTCGACACAAAAACGACCGCAGGGACCGTGTCAGGTAGTCAAGGCAAACAATTGGTGTTCACCAGCTCAGGGGACATGTTTGTTCGGAGAGAAAATGGTGGAAGATTCACTCTTACGGGGACAGAGGGAGTATCGGTGAGGGACAACTACATAAGGGCAACTCTTGATTTTGATGGGATTTTCGCGTTATATTCTCACCCGAAAAATTTCACTGGAAATGCAAGGTGGAGTAATCCTCTGTGGTATAAGCCGGATGATACTTGCCAAAACCTTCGTGAAGAAATGGGTTTTTGCGGATATAACAGTGTCTGTAAGCTCAAACTAGATAAAAAGGCCAACCTGCAAATGCCCAAAAGGGTTTTCTTTTCTTGA

Protein Analysis

251

Amino Acids

27.93

Weight (kDa)

9.01

Isoelectric Point (pI)

30.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 25 - 85 9.6e-09 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 729
AccB1I GGYRCC 1 cut(s) 32
AccI GTMKAC 1 cut(s) 268
AccII CGCG 1 cut(s) 566
AciI CCGC 3 cut(s) 298, 399, 675
AcsI RAATTY 1 cut(s) 586
AcuI CTGAAG 1 cut(s) 187
AcyI GRCGYC 1 cut(s) 33
AfaI GTAC 1 cut(s) 5
AfiI CCNNNNNNNGG 3 cut(s) 29, 44, 450
AflIII ACRYGT 1 cut(s) 456
AgsI TTSAA 2 cut(s) 78, 170
AjnI CCWGG 1 cut(s) 229
AjuI GAANNNNNNNTTGG 1 cut(s) 725
AluBI AGCT 4 cut(s) 189, 307, 447, 697
AluI AGCT 4 cut(s) 189, 307, 447, 697
Alw21I GWGCWC 1 cut(s) 339
Alw26I GTCTC 3 cut(s) 89, 191, 272
AlwNI CAGNNNCTG 1 cut(s) 690
Ama87I CYCGRG 1 cut(s) 22
AoxI GGCC 1 cut(s) 714
ApeKI GCWGC 1 cut(s) 307
ApoI RAATTY 1 cut(s) 586
Asp700I GAANNNNTTC 2 cut(s) 17, 587
AspLEI GCGC 2 cut(s) 35, 312
AspS9I GGNCC 1 cut(s) 405
AsuC2I CCSGG 2 cut(s) 23, 24
AsuHPI GGTGA 4 cut(s) 332, 433, 529, 569
AvaI CYCGRG 1 cut(s) 22
AvaII GGWCC 1 cut(s) 405
BaeGI GKGCMC 1 cut(s) 29
BanI GGYRCC 1 cut(s) 32
BauI CACGAG 1 cut(s) 332
Bbv12I GWGCWC 1 cut(s) 339
BbvI GCAGC 1 cut(s) 294
BccI CCATC 2 cut(s) 317, 548
BciT130I CCWGG 1 cut(s) 231
BcnI CCSGG 2 cut(s) 23, 24
BcoDI GTCTC 3 cut(s) 89, 191, 272
BfaI CTAG 1 cut(s) 704
BfmI CTRYAG 1 cut(s) 213
BfoI RGCGCY 1 cut(s) 36
BfuAI ACCTGC 1 cut(s) 729
BisI GCNGC 1 cut(s) 308
BlsI GCNGC 1 cut(s) 309
Bme1390I CCNGG 3 cut(s) 23, 24, 231
Bme18I GGWCC 1 cut(s) 405
BmeT110I CYCGRG 1 cut(s) 22
BmgT120I GGNCC 1 cut(s) 405
BmiI GGNNCC 3 cut(s) 34, 302, 406
BmrFI CCNGG 3 cut(s) 23, 24, 231
BplI GAGNNNNNCTC 2 cut(s) 601, 633
Bpu10I CCTNAGC 1 cut(s) 448
BpuMI CCSGG 2 cut(s) 23, 24
BsaHI GRCGYC 1 cut(s) 33
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 2 cut(s) 22, 117
BsaWI WCCGGW 1 cut(s) 152
BsaXI ACNNNNNCTCC 2 cut(s) 501, 531
Bsc4I CCNNNNNNNGG 3 cut(s) 29, 44, 450
Bse1I ACTGG 1 cut(s) 598
BseBI CCWGG 1 cut(s) 231
BseDI CCNNGG 2 cut(s) 22, 117
BseGI GGATG 1 cut(s) 640
BseLI CCNNNNNNNGG 3 cut(s) 29, 44, 450
BseMII CTCAG 2 cut(s) 98, 462
BseNI ACTGG 1 cut(s) 598
BseSI GKGCMC 1 cut(s) 29
BseXI GCAGC 1 cut(s) 294
Bsh1236I CGCG 1 cut(s) 566
Bsh1285I CGRYCG 1 cut(s) 399
BshFI GGCC 1 cut(s) 716
BshNI GGYRCC 1 cut(s) 32
BsiEI CGRYCG 1 cut(s) 399
BsiHKAI GWGCWC 1 cut(s) 339
BsiHKCI CYCGRG 1 cut(s) 22
BsiSI CCGG 3 cut(s) 23, 153, 632
BslFI GGGAC 6 cut(s) 136, 268, 418, 467, 514, 536
BslI CCNNNNNNNGG 3 cut(s) 29, 44, 450
BsmAI GTCTC 3 cut(s) 89, 191, 272
BsmFI GGGAC 6 cut(s) 136, 268, 418, 467, 514, 536
BsnI GGCC 1 cut(s) 716
Bso31I GGTCTC 1 cut(s) 191
BsoBI CYCGRG 1 cut(s) 22
Bsp1286I GDGCHC 2 cut(s) 29, 339
Bsp1407I TGTACA 1 cut(s) 3
BspACI CCGC 3 cut(s) 298, 399, 675
BspANI GGCC 1 cut(s) 716
BspCNI CTCAG 2 cut(s) 97, 461
BspFNI CGCG 1 cut(s) 566
BspHI TCATGA 1 cut(s) 141
BspLI GGNNCC 3 cut(s) 34, 302, 406
BspMI ACCTGC 1 cut(s) 729
BspT107I GGYRCC 1 cut(s) 32
BspTNI GGTCTC 1 cut(s) 191
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 1 cut(s) 598
BssECI CCNNGG 2 cut(s) 22, 117
BssNI GRCGYC 1 cut(s) 33
BssSI CACGAG 1 cut(s) 332
BssT1I CCWWGG 1 cut(s) 117
Bst2BI CACGAG 1 cut(s) 332
Bst2UI CCWGG 1 cut(s) 231
Bst4CI ACNGT 4 cut(s) 127, 346, 409, 686
BstACI GRCGYC 1 cut(s) 33
BstAUI TGTACA 1 cut(s) 3
BstC8I GCNNGC 1 cut(s) 314
BstDEI CTNAG 2 cut(s) 84, 448
BstF5I GGATG 1 cut(s) 640
BstFNI CGCG 1 cut(s) 566
BstH2I RGCGCY 1 cut(s) 36
BstHHI GCGC 2 cut(s) 35, 312
BstMAI GTCTC 3 cut(s) 89, 191, 272
BstMCI CGRYCG 1 cut(s) 399
BstMWI GCNNNNNNNGC 2 cut(s) 304, 313
BstNI CCWGG 1 cut(s) 231
BstNSI RCATGY 1 cut(s) 460
BstSCI CCNGG 3 cut(s) 21, 22, 229
BstSFI CTRYAG 1 cut(s) 213
BstSLI GKGCMC 1 cut(s) 29
BstUI CGCG 1 cut(s) 566
BstV1I GCAGC 1 cut(s) 294
BsuRI GGCC 1 cut(s) 716
BtsCI GGATG 1 cut(s) 640
BtsIMutI CAGTG 2 cut(s) 591, 691
BveI ACCTGC 1 cut(s) 729
Cac8I GCNNGC 1 cut(s) 314
CaiI CAGNNNCTG 1 cut(s) 690
CciI TCATGA 1 cut(s) 141
CfoI GCGC 2 cut(s) 35, 312
Cfr13I GGNCC 1 cut(s) 405
Cfr9I CCCGGG 1 cut(s) 22
CseI GACGC 1 cut(s) 265
Csp6I GTAC 1 cut(s) 4
CviAII CATG 3 cut(s) 99, 142, 457
CviJI RGCY 6 cut(s) 189, 307, 447, 631, 697, 716
CviKI_1 RGCY 6 cut(s) 189, 307, 447, 631, 697, 716
CviQI GTAC 1 cut(s) 4
DdeI CTNAG 2 cut(s) 84, 448
DinI GGCGCC 1 cut(s) 34
Eco130I CCWWGG 1 cut(s) 117
Eco31I GGTCTC 1 cut(s) 191
Eco47I GGWCC 1 cut(s) 405
Eco57I CTGAAG 1 cut(s) 187
Eco88I CYCGRG 1 cut(s) 22
EcoRII CCWGG 1 cut(s) 229
EcoT14I CCWWGG 1 cut(s) 117
EgeI GGCGCC 1 cut(s) 34
EheI GGCGCC 1 cut(s) 34
ErhI CCWWGG 1 cut(s) 117
FaeI CATG 3 cut(s) 102, 145, 460
FaiI YATR 9 cut(s) 11, 71, 100, 143, 458, 533, 571, 627, 681
FaqI GGGAC 6 cut(s) 136, 268, 418, 467, 514, 536
FatI CATG 3 cut(s) 98, 141, 456
FblI GTMKAC 1 cut(s) 268
Fnu4HI GCNGC 1 cut(s) 308
FokI GGATG 1 cut(s) 647
Fsp4HI GCNGC 1 cut(s) 308
FspBI CTAG 1 cut(s) 704
GlaI GCGC 2 cut(s) 34, 311
GluI GCNGC 1 cut(s) 308
HaeII RGCGCY 1 cut(s) 36
HaeIII GGCC 1 cut(s) 716
HapII CCGG 3 cut(s) 23, 153, 632
HgaI GACGC 1 cut(s) 265
HhaI GCGC 2 cut(s) 35, 312
Hin1I GRCGYC 1 cut(s) 33
Hin1II CATG 3 cut(s) 102, 145, 460
Hin6I GCGC 2 cut(s) 33, 310
HinP1I GCGC 2 cut(s) 33, 310
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HinfI GANTC 1 cut(s) 486
HpaII CCGG 3 cut(s) 23, 153, 632
HphI GGTGA 4 cut(s) 332, 433, 529, 569
Hpy166II GTNNAC 4 cut(s) 50, 269, 349, 441
Hpy188I TCNGA 4 cut(s) 109, 186, 277, 468
Hpy188III TCNNGA 4 cut(s) 142, 545, 656, 750
Hpy8I GTNNAC 4 cut(s) 50, 269, 349, 441
HpyAV CCTTC 3 cut(s) 176, 211, 662
HpyCH4III ACNGT 4 cut(s) 127, 346, 409, 686
HpyCH4V TGCA 3 cut(s) 316, 602, 724
HpyF10VI GCNNNNNNNGC 2 cut(s) 304, 313
HpyF3I CTNAG 2 cut(s) 84, 448
Hsp92I GRCGYC 1 cut(s) 33
Hsp92II CATG 3 cut(s) 102, 145, 460
HspAI GCGC 2 cut(s) 33, 310
KasI GGCGCC 1 cut(s) 32
LmnI GCTCC 1 cut(s) 186
Lsp1109I GCAGC 1 cut(s) 294
MaeI CTAG 1 cut(s) 704
MboII GAAGA 2 cut(s) 495, 671
MfeI CAATTG 2 cut(s) 240, 431
MhlI GDGCHC 2 cut(s) 29, 339
MluCI AATT 3 cut(s) 240, 431, 586
Mly113I GGCGCC 1 cut(s) 33
MnlI CCTC 4 cut(s) 341, 499, 513, 627
MroXI GAANNNNTTC 2 cut(s) 17, 587
MspA1I CMGCKG 1 cut(s) 307
MspI CCGG 3 cut(s) 23, 153, 632
MspR9I CCNGG 3 cut(s) 23, 24, 231
MunI CAATTG 2 cut(s) 240, 431
MvaI CCWGG 1 cut(s) 231
MvnI CGCG 1 cut(s) 566
MwoI GCNNNNNNNGC 2 cut(s) 304, 313
NarI GGCGCC 1 cut(s) 33
NciI CCSGG 2 cut(s) 23, 24
NlaIII CATG 3 cut(s) 102, 145, 460
NlaIV GGNNCC 3 cut(s) 34, 302, 406
NspI RCATGY 1 cut(s) 460
PagI TCATGA 1 cut(s) 141
PciI ACATGT 1 cut(s) 456
PdmI GAANNNNTTC 2 cut(s) 17, 587
PfeI GAWTC 1 cut(s) 486
PflFI GACNNNGTC 1 cut(s) 409
PkrI GCNGC 1 cut(s) 309
PluTI GGCGCC 1 cut(s) 36
PscI ACATGT 1 cut(s) 456
Psp6I CCWGG 1 cut(s) 229
PspGI CCWGG 1 cut(s) 229
PspN4I GGNNCC 3 cut(s) 34, 302, 406
PspPI GGNCC 1 cut(s) 405
PstNI CAGNNNCTG 1 cut(s) 690
PsyI GACNNNGTC 1 cut(s) 409
PvuII CAGCTG 1 cut(s) 307
RsaI GTAC 1 cut(s) 5
RsaNI GTAC 1 cut(s) 4
SatI GCNGC 1 cut(s) 308
Sau96I GGNCC 1 cut(s) 405
ScrFI CCNGG 3 cut(s) 23, 24, 231
SduI GDGCHC 2 cut(s) 29, 339
SfcI CTRYAG 1 cut(s) 213
SfoI GGCGCC 1 cut(s) 34
SinI GGWCC 1 cut(s) 405
SmaI CCCGGG 1 cut(s) 24
Sse9I AATT 3 cut(s) 240, 431, 586
SsiI CCGC 3 cut(s) 298, 399, 675
SspDI GGCGCC 1 cut(s) 32
SspI AATATT 1 cut(s) 62
SspMI CTAG 1 cut(s) 704
StyD4I CCNGG 3 cut(s) 21, 22, 229
StyI CCWWGG 1 cut(s) 117
TaaI ACNGT 4 cut(s) 127, 346, 409, 686
TaqI TCGA 1 cut(s) 384
TasI AATT 3 cut(s) 240, 431, 586
TatI WGTACW 1 cut(s) 3
TfiI GAWTC 1 cut(s) 486
TscAI CASTG 2 cut(s) 598, 691
TseI GCWGC 1 cut(s) 307
TspDTI ATGAA 2 cut(s) 26, 158
TspMI CCCGGG 1 cut(s) 22
TspRI CASTG 2 cut(s) 598, 691
Tth111I GACNNNGTC 1 cut(s) 409
VpaK11BI GGWCC 1 cut(s) 405
XapI RAATTY 1 cut(s) 586
XceI RCATGY 1 cut(s) 460
XmaI CCCGGG 1 cut(s) 22
XmiI GTMKAC 1 cut(s) 268
XmnI GAANNNNTTC 2 cut(s) 17, 587
XspI CTAG 1 cut(s) 704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.