Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0000130

Physical Location & Seq

Genomic Coordinates Reverse (-)

84496936 .. 84517483

Gene Structure 20548 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG550000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGCTTTCCCTGTAAGGCTGCTTCTTTTTCTTTCATCACTTTATCTGGTTCCGATTTCTGTGTTTGCTCAGACTGATGGCAAAGTAGCTGTGGGAGCTTCTCTCTCTGCAACTGCAGGTAACAGCTCCTCGTGGCTTTCACCTTCTGGCGATTTCGCCTTTGGTTTTCGACAACTCGAAAACAGTGATCTTTTCTTGCTTTCTTTATGGTATGCCAAGATTCCAGACAGAACCATAGTTTGGTATGCAAATAATGGGGATAGTCCTGCAGCTGTAGCTAAGGGTTCACTTCTGAATTTGACTGCTGACAGTGGACTAGTGCTTACAAGTCCTCGCGGTGTTCAGCTTTGGAAATCTGAGTCCATTTCTGGAGTTGTTGCCTTTGGGGTCTTGAATGATACAGGCAACTTTGTTCTTGAAGATGACAATTCTGAGAGCTTATGGGAGACCTTCAATTATCCAACTCATACCGTTTTACCATGGCAGGAAATCAAAAAAGGAGGGAAGCTTTCGTCTCAACAATCCGAGACTAACTTTTCGAAAGGAAGATTCGAGCTACGTATGCAAGATGATGGCAATCTTGTGCTTGTCACCATAAACTTGCCATCTGAGTTTGCCAACGCGCCTTACTATGCAAGTGACACTACCGGTGAATCAAATTCTTCTACTGCTGGTACAAAGCTGGAGTTCAATAGCTCTGGCTACATGTATGTTCTGAGAGAGAACGGTGAGAAACTCTCCATCAAAGAAGCAGAGACAGTCTCAGCTAGGAGCTTCTATCTTAGAGCAACCCTCAACTTTGATGGGGTTTTTGCTCAATACTCTCACCCGAAAAATTTTACTGGTAATGAAAGCTGGAGTGTTGTTTGGTCAGTGCCAGATAACATATGCACTATGACGATTGATTCAGGTCTGGGTGTATGTGGCTACAACAGTATCTGCACTCTCCAAGATCAGAGGCCTACCTGTGCATGCCCAAAAGGATACTCTTTACTGGATCCGAATGATCTGTATGGGAATTGCAAGCCGGATTTCATACAAGGCTGTGAAGAAGATAAGCTGAGTCCCACAAATGATATATATGAAGTTCAGATGCTGACCAATACGGATTGGCCACTGTCAGATTTTATGCAGTTAAATCCTTCTACCCCAGAGAGTTGCAATCAATCTTGCTTTGAAGATTGTTTGTGTGCTGTTGCCATTTATAGAGTTGAAACCTGTTGGAAAAAGAAGTTACCTCTCTCAAATGGGAGAGTGGATAGCGGGCTTAATTCACAGGCCTTCATCAAAGTCAGGAAGGGTAATTTAACTCTACCAGTTCCTCAAACGCCAAATCCGGAAGACAAGAAGATGAAGAACCAGACCACTTTAATACGCGTGGGATCAGCGCTTCTTGGTGAAGTCCAGCTGGTCACTCTCCCCATTTGGCTATCGGAAAAGTGGAACATCAGATCAAGGATAAGTCGCCATGAAAGTCTCGGAGCTTTTGGAGCTCTTCGACCTCGATATGCTCGATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

506

Amino Acids

55.87

Weight (kDa)

5.22

Isoelectric Point (pI)

40.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	78 - 166	3.2e-13	D-mannose binding lectin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000130)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43780
malus_domestica	MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica	Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis	pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis	RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata	RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora	Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii	Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa	Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha	Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana	Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	107
AccB7I	CCANNNNNTGG	1 cut(s)	240
AccII	CGCG	3 cut(s)	336, 623, 1377
AccIII	TCCGGA	1 cut(s)	1336
AciI	CCGC	2 cut(s)	336, 1263
AclWI	GGATC	3 cut(s)	992, 1005, 1390
AcoI	YGGCCR	1 cut(s)	1112
AcsI	RAATTY	3 cut(s)	295, 658, 835
AfaI	GTAC	1 cut(s)	676
AfeI	AGCGCT	1 cut(s)	1389
AfiI	CCNNNNNNNGG	1 cut(s)	240
AflIII	ACRYGT	2 cut(s)	705, 1375
AgeI	ACCGGT	1 cut(s)	647
AgsI	TTSAA	6 cut(s)	394, 419, 454, 691, 1178, 1214
AhlI	ACTAGT	1 cut(s)	316
AjuI	GAANNNNNNNTTGG	2 cut(s)	223, 255
Alw21I	GWGCWC	1 cut(s)	1495
Alw26I	GTCTC	6 cut(s)	440, 519, 521, 749, 766, 1481
AlwI	GGATC	3 cut(s)	992, 1005, 1390
AlwNI	CAGNNNCTG	2 cut(s)	939, 1096
Aor13HI	TCCGGA	1 cut(s)	1336
Aor51HI	AGCGCT	1 cut(s)	1389
AoxI	GGCC	3 cut(s)	959, 1112, 1278
ApeKI	GCWGC	2 cut(s)	19, 269
ApoI	RAATTY	3 cut(s)	295, 658, 835
ArsI	GACNNNNNNTTYG	2 cut(s)	520, 552
AsiGI	ACCGGT	1 cut(s)	647
AspLEI	GCGC	2 cut(s)	625, 1390
AsuHPI	GGTGA	6 cut(s)	132, 583, 662, 740, 818, 1409
AsuII	TTCGAA	1 cut(s)	539
BaeI	ACNNNNGTAYC	2 cut(s)	919, 952
BalI	TGGCCA	1 cut(s)	1114
BamHI	GGATCC	1 cut(s)	997
BanII	GRGCYC	1 cut(s)	1495
BarI	GAAGNNNNNNTAC	1 cut(s)	38
BauI	CACGAG	1 cut(s)	130
BbsI	GAAGAC	1 cut(s)	1347
Bbv12I	GWGCWC	1 cut(s)	1495
BbvI	GCAGC	2 cut(s)	6, 281
BccI	CCATC	5 cut(s)	71, 566, 613, 749, 797
BciVI	GTATCC	1 cut(s)	977
BcoDI	GTCTC	6 cut(s)	440, 519, 521, 749, 766, 1481
BcuI	ACTAGT	1 cut(s)	316
BfaI	CTAG	2 cut(s)	317, 768
BfmI	CTRYAG	3 cut(s)	114, 267, 273
BfoI	RGCGCY	1 cut(s)	1391
BfuAI	ACCTGC	1 cut(s)	107
BfuI	GTATCC	1 cut(s)	977
BisI	GCNGC	2 cut(s)	20, 270
BlsI	GCNGC	2 cut(s)	21, 271
BmiI	GGNNCC	2 cut(s)	51, 999
BmsI	GCATC	1 cut(s)	1083
BpiI	GAAGAC	1 cut(s)	1347
BplI	GAGNNNNNCTC	8 cut(s)	87, 119, 722, 754, 746, 778, 777, 809
BpmI	CTGGAG	3 cut(s)	390, 704, 877
Bpu10I	CCTNAGC	1 cut(s)	279
Bpu14I	TTCGAA	1 cut(s)	539
BsaAI	YACGTR	1 cut(s)	560
BsaBI	GATNNNNATC	1 cut(s)	576
BsaI	GGTCTC	1 cut(s)	440
BsaJI	CCNNGG	1 cut(s)	479
BsaWI	WCCGGW	2 cut(s)	647, 1336
Bsc4I	CCNNNNNNNGG	1 cut(s)	240
Bse118I	RCCGGY	1 cut(s)	647
Bse1I	ACTGG	3 cut(s)	847, 999, 1316
Bse8I	GATNNNNATC	1 cut(s)	576
BseAI	TCCGGA	1 cut(s)	1336
BseDI	CCNNGG	1 cut(s)	479
BseJI	GATNNNNATC	1 cut(s)	576
BseLI	CCNNNNNNNGG	1 cut(s)	240
BseMII	CTCAG	7 cut(s)	83, 348, 423, 600, 707, 777, 1052
BseNI	ACTGG	3 cut(s)	847, 999, 1316
BseRI	GAGGAG	1 cut(s)	118
BseXI	GCAGC	2 cut(s)	6, 281
BsgI	GTGCAG	1 cut(s)	925
Bsh1236I	CGCG	3 cut(s)	336, 623, 1377
BshFI	GGCC	3 cut(s)	961, 1114, 1280
BshTI	ACCGGT	1 cut(s)	647
BsiHKAI	GWGCWC	1 cut(s)	1495
BsiSI	CCGG	3 cut(s)	648, 1028, 1337
BslFI	GGGAC	1 cut(s)	1050
BslI	CCNNNNNNNGG	1 cut(s)	240
BsmAI	GTCTC	6 cut(s)	440, 519, 521, 749, 766, 1481
BsmBI	CGTCTC	1 cut(s)	519
BsmFI	GGGAC	1 cut(s)	1050
BsnI	GGCC	3 cut(s)	961, 1114, 1280
Bso31I	GGTCTC	1 cut(s)	440
Bsp119I	TTCGAA	1 cut(s)	539
Bsp1286I	GDGCHC	1 cut(s)	1495
Bsp13I	TCCGGA	1 cut(s)	1336
Bsp143I	GATC	6 cut(s)	187, 952, 997, 1006, 1382, 1451
Bsp19I	CCATGG	1 cut(s)	479
BspACI	CCGC	2 cut(s)	336, 1263
BspANI	GGCC	3 cut(s)	961, 1114, 1280
BspCNI	CTCAG	7 cut(s)	82, 349, 424, 601, 708, 776, 1053
BspEI	TCCGGA	1 cut(s)	1336
BspFNI	CGCG	3 cut(s)	336, 623, 1377
BspLI	GGNNCC	2 cut(s)	51, 999
BspMAI	CTGCAG	2 cut(s)	118, 271
BspMI	ACCTGC	1 cut(s)	107
BspPI	GGATC	3 cut(s)	992, 1005, 1390
BspQI	GCTCTTC	1 cut(s)	1500
BspT104I	TTCGAA	1 cut(s)	539
BspTNI	GGTCTC	1 cut(s)	440
BsrFI	RCCGGY	1 cut(s)	647
BsrI	ACTGG	3 cut(s)	847, 999, 1316
BssAI	RCCGGY	1 cut(s)	647
BssECI	CCNNGG	1 cut(s)	479
BssMI	GATC	6 cut(s)	187, 952, 997, 1006, 1382, 1451
BssSI	CACGAG	1 cut(s)	130
BssT1I	CCWWGG	1 cut(s)	479
Bst2BI	CACGAG	1 cut(s)	130
Bst4CI	ACNGT	7 cut(s)	185, 311, 472, 728, 760, 935, 1119
Bst6I	CTCTTC	1 cut(s)	1500
BstBAI	YACGTR	1 cut(s)	560
BstBI	TTCGAA	1 cut(s)	539
BstC8I	GCNNGC	3 cut(s)	973, 1025, 1265
BstDEI	CTNAG	9 cut(s)	69, 279, 357, 432, 609, 716, 763, 782, 1061
BstDSI	CCRYGG	1 cut(s)	479
BstFNI	CGCG	3 cut(s)	336, 623, 1377
BstH2I	RGCGCY	1 cut(s)	1391
BstHHI	GCGC	2 cut(s)	625, 1390
BstKTI	GATC	6 cut(s)	190, 955, 1000, 1009, 1385, 1454
BstMAI	GTCTC	6 cut(s)	440, 519, 521, 749, 766, 1481
BstMBI	GATC	6 cut(s)	187, 952, 997, 1006, 1382, 1451
BstMWI	GCNNNNNNNGC	4 cut(s)	95, 275, 562, 1490
BstNSI	RCATGY	2 cut(s)	709, 975
BstSFI	CTRYAG	3 cut(s)	114, 267, 273
BstSNI	TACGTA	1 cut(s)	560
BstUI	CGCG	3 cut(s)	336, 623, 1377
BstV1I	GCAGC	2 cut(s)	6, 281
BstV2I	GAAGAC	1 cut(s)	1347
BstX2I	RGATCY	1 cut(s)	997
BstYI	RGATCY	1 cut(s)	997
BsuI	GTATCC	1 cut(s)	977
BsuRI	GGCC	3 cut(s)	961, 1114, 1280
BtgI	CCRYGG	1 cut(s)	479
BtsIMutI	CAGTG	4 cut(s)	190, 316, 879, 1115
BveI	ACCTGC	1 cut(s)	107
Cac8I	GCNNGC	3 cut(s)	973, 1025, 1265
CaiI	CAGNNNCTG	2 cut(s)	939, 1096
CfoI	GCGC	2 cut(s)	625, 1390
Cfr10I	RCCGGY	1 cut(s)	647
Csp6I	GTAC	1 cut(s)	675
CspAI	ACCGGT	1 cut(s)	647
CviAII	CATG	4 cut(s)	480, 706, 972, 1469
CviQI	GTAC	1 cut(s)	675
DdeI	CTNAG	9 cut(s)	69, 279, 357, 432, 609, 716, 763, 782, 1061
DpnI	GATC	6 cut(s)	189, 954, 999, 1008, 1384, 1453
DpnII	GATC	6 cut(s)	187, 952, 997, 1006, 1382, 1451
EaeI	YGGCCR	1 cut(s)	1112
Eam1104I	CTCTTC	1 cut(s)	1500
EarI	CTCTTC	1 cut(s)	1500
Ecl136II	GAGCTC	1 cut(s)	1493
Eco105I	TACGTA	1 cut(s)	560
Eco130I	CCWWGG	1 cut(s)	479
Eco147I	AGGCCT	2 cut(s)	961, 1280
Eco24I	GRGCYC	1 cut(s)	1495
Eco31I	GGTCTC	1 cut(s)	440
Eco47III	AGCGCT	1 cut(s)	1389
Eco53kI	GAGCTC	1 cut(s)	1493
EcoICRI	GAGCTC	1 cut(s)	1493
EcoT14I	CCWWGG	1 cut(s)	479
EcoT38I	GRGCYC	1 cut(s)	1495
ErhI	CCWWGG	1 cut(s)	479
Esp3I	CGTCTC	1 cut(s)	519
FaeI	CATG	4 cut(s)	483, 709, 975, 1472
FaqI	GGGAC	1 cut(s)	1050
FatI	CATG	4 cut(s)	479, 705, 971, 1468
FauI	CCCGC	1 cut(s)	1256
FauNDI	CATATG	1 cut(s)	887
Fnu4HI	GCNGC	2 cut(s)	20, 270
FriOI	GRGCYC	1 cut(s)	1495
Fsp4HI	GCNGC	2 cut(s)	20, 270
FspBI	CTAG	2 cut(s)	317, 768
GlaI	GCGC	2 cut(s)	624, 1389
GluI	GCNGC	2 cut(s)	20, 270
GsuI	CTGGAG	3 cut(s)	390, 704, 877
HaeII	RGCGCY	1 cut(s)	1391
HaeIII	GGCC	3 cut(s)	961, 1114, 1280
HapII	CCGG	3 cut(s)	648, 1028, 1337
HhaI	GCGC	2 cut(s)	625, 1390
Hin1II	CATG	4 cut(s)	483, 709, 975, 1472
Hin6I	GCGC	2 cut(s)	623, 1388
HinP1I	GCGC	2 cut(s)	623, 1388
HindIII	AAGCTT	1 cut(s)	506
HinfI	GANTC	6 cut(s)	220, 359, 549, 653, 905, 1063
HpaII	CCGG	3 cut(s)	648, 1028, 1337
HphI	GGTGA	6 cut(s)	132, 583, 662, 740, 818, 1409
Hpy166II	GTNNAC	2 cut(s)	287, 314
Hpy188III	TCNNGA	6 cut(s)	224, 369, 391, 416, 1294, 1337
Hpy8I	GTNNAC	2 cut(s)	287, 314
HpyAV	CCTTC	5 cut(s)	153, 460, 1152, 1291, 1291
HpyCH4III	ACNGT	7 cut(s)	185, 311, 472, 728, 760, 935, 1119
HpyCH4IV	ACGT	1 cut(s)	559
HpyF10VI	GCNNNNNNNGC	4 cut(s)	95, 275, 562, 1490
HpyF3I	CTNAG	9 cut(s)	69, 279, 357, 432, 609, 716, 763, 782, 1061
HpySE526I	ACGT	1 cut(s)	559
Hsp92II	CATG	4 cut(s)	483, 709, 975, 1472
HspAI	GCGC	2 cut(s)	623, 1388
Kpn2I	TCCGGA	1 cut(s)	1336
Kzo9I	GATC	6 cut(s)	187, 952, 997, 1006, 1382, 1451
LguI	GCTCTTC	1 cut(s)	1500
LmnI	GCTCC	5 cut(s)	95, 131, 771, 1481, 1490
Lsp1109I	GCAGC	2 cut(s)	6, 281
LweI	GCATC	1 cut(s)	1083
MaeI	CTAG	2 cut(s)	317, 768
MaeII	ACGT	1 cut(s)	559
MaeIII	GTNAC	5 cut(s)	119, 589, 638, 1233, 1411
MalI	GATC	6 cut(s)	189, 954, 999, 1008, 1384, 1453
MboI	GATC	6 cut(s)	187, 952, 997, 1006, 1382, 1451
MflI	RGATCY	1 cut(s)	997
MhlI	GDGCHC	1 cut(s)	1495
MlsI	TGGCCA	1 cut(s)	1114
MluCI	AATT	8 cut(s)	295, 427, 454, 658, 835, 1018, 1270, 1303
MluI	ACGCGT	1 cut(s)	1375
MluNI	TGGCCA	1 cut(s)	1114
MlyI	GAGTC	2 cut(s)	368, 1072
MmeI	TCCRAC	2 cut(s)	485, 1202
MnlI	CCTC	8 cut(s)	139, 342, 494, 803, 951, 1248, 1332, 1512
Mox20I	TGGCCA	1 cut(s)	1114
MroI	TCCGGA	1 cut(s)	1336
MscI	TGGCCA	1 cut(s)	1114
MseI	TTAA	4 cut(s)	1136, 1269, 1307, 1370
Msp20I	TGGCCA	1 cut(s)	1114
MspA1I	CMGCKG	2 cut(s)	272, 1408
MspI	CCGG	3 cut(s)	648, 1028, 1337
MvnI	CGCG	3 cut(s)	336, 623, 1377
MwoI	GCNNNNNNNGC	4 cut(s)	95, 275, 562, 1490
NcoI	CCATGG	1 cut(s)	479
NdeI	CATATG	1 cut(s)	887
NdeII	GATC	6 cut(s)	187, 952, 997, 1006, 1382, 1451
NlaIII	CATG	4 cut(s)	483, 709, 975, 1472
NlaIV	GGNNCC	2 cut(s)	51, 999
NmuCI	GTSAC	3 cut(s)	589, 638, 1411
NspI	RCATGY	2 cut(s)	709, 975
NspV	TTCGAA	1 cut(s)	539
PaeI	GCATGC	1 cut(s)	975
PceI	AGGCCT	2 cut(s)	961, 1280
PciI	ACATGT	1 cut(s)	705
PciSI	GCTCTTC	1 cut(s)	1500
PcsI	WCGNNNNNNNCGW	1 cut(s)	1510
PfeI	GAWTC	4 cut(s)	220, 549, 653, 905
PflMI	CCANNNNNTGG	1 cut(s)	240
PinAI	ACCGGT	1 cut(s)	647
PkrI	GCNGC	2 cut(s)	21, 271
PleI	GAGTC	2 cut(s)	367, 1071
PpsI	GAGTC	2 cut(s)	367, 1071
Ppu21I	YACGTR	1 cut(s)	560
PscI	ACATGT	1 cut(s)	705
Psp124BI	GAGCTC	1 cut(s)	1495
PspN4I	GGNNCC	2 cut(s)	51, 999
PstI	CTGCAG	2 cut(s)	118, 271
PstNI	CAGNNNCTG	2 cut(s)	939, 1096
PsuI	RGATCY	1 cut(s)	997
PvuII	CAGCTG	2 cut(s)	272, 1408
RsaI	GTAC	1 cut(s)	676
RsaNI	GTAC	1 cut(s)	675
SacI	GAGCTC	1 cut(s)	1495
SapI	GCTCTTC	1 cut(s)	1500
SaqAI	TTAA	4 cut(s)	1136, 1269, 1307, 1370
SatI	GCNGC	2 cut(s)	20, 270
Sau3AI	GATC	6 cut(s)	187, 952, 997, 1006, 1382, 1451
SchI	GAGTC	2 cut(s)	368, 1072
SduI	GDGCHC	1 cut(s)	1495
SfaNI	GCATC	1 cut(s)	1083
SfcI	CTRYAG	3 cut(s)	114, 267, 273
SfuI	TTCGAA	1 cut(s)	539
SnaBI	TACGTA	1 cut(s)	560
SpeI	ACTAGT	1 cut(s)	316
SphI	GCATGC	1 cut(s)	975
Sse9I	AATT	8 cut(s)	295, 427, 454, 658, 835, 1018, 1270, 1303
SseBI	AGGCCT	2 cut(s)	961, 1280
SsiI	CCGC	2 cut(s)	336, 1263
SspMI	CTAG	2 cut(s)	317, 768
SstI	GAGCTC	1 cut(s)	1495
StuI	AGGCCT	2 cut(s)	961, 1280
StyI	CCWWGG	1 cut(s)	479
TaaI	ACNGT	7 cut(s)	185, 311, 472, 728, 760, 935, 1119
TaiI	ACGT	1 cut(s)	562
TaqI	TCGA	7 cut(s)	169, 177, 539, 552, 1498, 1504, 1513
TasI	AATT	8 cut(s)	295, 427, 454, 658, 835, 1018, 1270, 1303
TfiI	GAWTC	4 cut(s)	220, 549, 653, 905
Tru1I	TTAA	4 cut(s)	1136, 1269, 1307, 1370
Tru9I	TTAA	4 cut(s)	1136, 1269, 1307, 1370
TscAI	CASTG	4 cut(s)	190, 316, 879, 1122
TseFI	GTSAC	3 cut(s)	589, 638, 1411
TseI	GCWGC	2 cut(s)	19, 269
Tsp45I	GTSAC	3 cut(s)	589, 638, 1411
TspDTI	ATGAA	7 cut(s)	24, 864, 1024, 1098, 1273, 1367, 1485
TspGWI	ACGGA	1 cut(s)	1121
TspRI	CASTG	4 cut(s)	190, 316, 879, 1122
Van91I	CCANNNNNTGG	1 cut(s)	240
XapI	RAATTY	3 cut(s)	295, 658, 835
XceI	RCATGY	2 cut(s)	709, 975
XspI	CTAG	2 cut(s)	317, 768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.