Rmu_sc0000607.1_g000012

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000607.1
Physical Location & Seq
Forward (+)
57713 .. 58933
1221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000607.1_g000012.1.cds

Sequence Viewer

Length: 1221 bp
atgcctgcgcaaagtaatggtagccaagcagtaggtgcttctttctctgttgcagttaactcttcgtggcttaatacagcgaccttcatcaaagttagtgagaccaactcaactcttcaggttcctccaaagccaagtccagatgataagaagaagaacaagaccacttcaatacttttgggtacctctgtctttgtcaattttattttaattgctgcagtttgtctcggagttctcatctaccggaagaaacatgcaaggttcactggaaatgagttggaaacaaatttggtttgttttagttacaaggagcttgaagaagctacaaatggattcagtgaagaattagggaggggttcttttggagttgtttacaaagggataatacatattggttctggtctccaagtagcagtgaagaagctaaactgtgttatacaagagggtgagcaggaattcaagacagagctcaacataatcggtaagacacatcacaagaatcttgttcaactggttggatattgtgacgagggagagcaactaccacggttacttgtatatgaactactgagcaatggcacattagcaagattcctttttggtgaaacgaaacccagttggacgcaacgaattgagattgcttatggagttgccaatggactaatgtacttgcatgaggagtgcagaacacagattatacattgtgatataaagcctcagaacatacttctcgatgaacattacaatgctcggatctctgatttcggattggcaaagcttttaatactaaatcagagccatacgcttactgccataagaggaacaaaagggtatgttgcacctgagtggtttcggaatatgccaatcactaccaaagtcgatgtgtatagcttcggcgttgtgctgctagagatcatcttctgtaggagaaatgttgatatggaaaacaaatgtgaagacaaggcaattttagccaattgggtttatgattgctatcgaaagggtgtatttggtgaggctctagatcaagaagctgaggccttgtatgatacacggaaggccttggaaaatattgtgatgattgctatgtggtgcattcaagaagacccgtctcttcgacccacaatgaggatggttgtgcagatgcttgaaggagcagtggaagtacatgttccaccatgtccatccccatatactggagcaagccttaaatcactttag

Protein Analysis

406

Amino Acids

45.37

Weight (kDa)

6.34

Isoelectric Point (pI)

35.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 9
Acc65I GGTACC 1 cut(s) 182
AccB1I GGYRCC 1 cut(s) 182
AccB7I CCANNNNNTGG 1 cut(s) 1196
AclWI GGATC 1 cut(s) 761
AcsI RAATTY 2 cut(s) 286, 455
AcuI CTGAAG 1 cut(s) 101
AfaI GTAC 3 cut(s) 184, 668, 1167
AfiI CCNNNNNNNGG 2 cut(s) 1128, 1196
AflIII ACRYGT 1 cut(s) 1168
AgsI TTSAA 6 cut(s) 171, 317, 460, 509, 1100, 1151
AleI CACNNNNGTG 1 cut(s) 844
AluBI AGCT 7 cut(s) 313, 323, 424, 469, 778, 891, 1034
AluI AGCT 7 cut(s) 313, 323, 424, 469, 778, 891, 1034
Alw21I GWGCWC 1 cut(s) 471
Alw26I GTCTC 4 cut(s) 95, 230, 407, 1116
AlwI GGATC 1 cut(s) 761
AoxI GGCC 2 cut(s) 1038, 1059
ApeKI GCWGC 2 cut(s) 215, 904
ApoI RAATTY 2 cut(s) 286, 455
Asp718I GGTACC 1 cut(s) 182
AspLEI GCGC 1 cut(s) 10
AsuHPI GGTGA 3 cut(s) 458, 614, 1025
BaeI ACNNNNGTAYC 2 cut(s) 174, 207
BanI GGYRCC 1 cut(s) 182
BanII GRGCYC 1 cut(s) 471
BbsI GAAGAC 2 cut(s) 963, 1110
Bbv12I GWGCWC 1 cut(s) 471
BbvCI CCTCAGC 1 cut(s) 1035
BbvI GCAGC 2 cut(s) 202, 891
BccI CCATC 2 cut(s) 1126, 1192
BcoDI GTCTC 4 cut(s) 95, 230, 407, 1116
BfaI CTAG 2 cut(s) 908, 1022
BfmI CTRYAG 2 cut(s) 216, 922
BisI GCNGC 2 cut(s) 216, 905
BlsI GCNGC 2 cut(s) 217, 906
BmiI GGNNCC 2 cut(s) 123, 184
BmrI ACTGGG 1 cut(s) 609
BmsI GCATC 1 cut(s) 1134
BmuI ACTGGG 1 cut(s) 609
BpiI GAAGAC 2 cut(s) 963, 1110
BplI GAGNNNNNCTC 2 cut(s) 92, 124
BpmI CTGGAG 1 cut(s) 1218
Bpu10I CCTNAGC 1 cut(s) 1035
BsaBI GATNNNNATC 1 cut(s) 993
BsaI GGTCTC 2 cut(s) 95, 407
BsaJI CCNNGG 2 cut(s) 545, 1062
BsaWI WCCGGW 1 cut(s) 243
Bsc4I CCNNNNNNNGG 2 cut(s) 1128, 1196
Bse1I ACTGG 4 cut(s) 271, 516, 615, 1201
Bse3DI GCAATG 1 cut(s) 580
Bse8I GATNNNNATC 1 cut(s) 993
BseDI CCNNGG 2 cut(s) 545, 1062
BseGI GGATG 2 cut(s) 1137, 1184
BseJI GATNNNNATC 1 cut(s) 993
BseLI CCNNNNNNNGG 2 cut(s) 1128, 1196
BseMI GCAATG 1 cut(s) 580
BseMII CTCAG 4 cut(s) 560, 731, 834, 1026
BseNI ACTGG 4 cut(s) 271, 516, 615, 1201
BseRI GAGGAG 1 cut(s) 692
BseXI GCAGC 2 cut(s) 202, 891
BsgI GTGCAG 2 cut(s) 703, 1160
BshFI GGCC 2 cut(s) 1040, 1061
BshNI GGYRCC 1 cut(s) 182
BsiHKAI GWGCWC 1 cut(s) 471
BsiSI CCGG 1 cut(s) 244
BslI CCNNNNNNNGG 2 cut(s) 1128, 1196
BsmAI GTCTC 4 cut(s) 95, 230, 407, 1116
BsmBI CGTCTC 1 cut(s) 1116
BsmI GAATGC 1 cut(s) 1095
BsnI GGCC 2 cut(s) 1040, 1061
Bso31I GGTCTC 2 cut(s) 95, 407
Bsp1286I GDGCHC 1 cut(s) 471
Bsp143I GATC 3 cut(s) 753, 912, 1024
BspANI GGCC 2 cut(s) 1040, 1061
BspCNI CTCAG 4 cut(s) 561, 730, 835, 1027
BspLI GGNNCC 2 cut(s) 123, 184
BspMAI CTGCAG 1 cut(s) 220
BspPI GGATC 1 cut(s) 761
BspT107I GGYRCC 1 cut(s) 182
BspTNI GGTCTC 2 cut(s) 95, 407
BsrDI GCAATG 1 cut(s) 580
BsrI ACTGG 4 cut(s) 271, 516, 615, 1201
BssECI CCNNGG 2 cut(s) 545, 1062
BssMI GATC 3 cut(s) 753, 912, 1024
BssT1I CCWWGG 1 cut(s) 1062
Bst4CI ACNGT 2 cut(s) 431, 549
Bst6I CTCTTC 3 cut(s) 67, 120, 1119
BstAPI GCANNNNNTGC 1 cut(s) 35
BstC8I GCNNGC 2 cut(s) 6, 1204
BstDEI CTNAG 4 cut(s) 569, 717, 843, 1035
BstDSI CCRYGG 1 cut(s) 545
BstF5I GGATG 2 cut(s) 1137, 1184
BstHHI GCGC 1 cut(s) 10
BstKTI GATC 3 cut(s) 756, 915, 1027
BstMAI GTCTC 4 cut(s) 95, 230, 407, 1116
BstMBI GATC 3 cut(s) 753, 912, 1024
BstMWI GCNNNNNNNGC 2 cut(s) 35, 971
BstNSI RCATGY 2 cut(s) 257, 1172
BstSFI CTRYAG 2 cut(s) 216, 922
BstV1I GCAGC 2 cut(s) 202, 891
BstV2I GAAGAC 2 cut(s) 963, 1110
BstX2I RGATCY 1 cut(s) 753
BstYI RGATCY 1 cut(s) 753
BsuRI GGCC 2 cut(s) 1040, 1061
BtgI CCRYGG 1 cut(s) 545
BtsCI GGATG 2 cut(s) 1137, 1184
BtsI GCAGTG 2 cut(s) 420, 1164
BtsIMutI CAGTG 4 cut(s) 264, 343, 420, 1164
Cac8I GCNNGC 2 cut(s) 6, 1204
CfoI GCGC 1 cut(s) 10
CseI GACGC 1 cut(s) 631
Csp6I GTAC 3 cut(s) 183, 667, 1166
CviAII CATG 4 cut(s) 254, 674, 1169, 1179
CviQI GTAC 3 cut(s) 183, 667, 1166
DdeI CTNAG 4 cut(s) 569, 717, 843, 1035
DpnI GATC 3 cut(s) 755, 914, 1026
DpnII GATC 3 cut(s) 753, 912, 1024
Eam1104I CTCTTC 3 cut(s) 67, 120, 1119
EarI CTCTTC 3 cut(s) 67, 120, 1119
Ecl136II GAGCTC 1 cut(s) 469
Eco130I CCWWGG 1 cut(s) 1062
Eco147I AGGCCT 2 cut(s) 1040, 1061
Eco24I GRGCYC 1 cut(s) 471
Eco31I GGTCTC 2 cut(s) 95, 407
Eco53kI GAGCTC 1 cut(s) 469
Eco57I CTGAAG 1 cut(s) 101
EcoICRI GAGCTC 1 cut(s) 469
EcoRI GAATTC 1 cut(s) 455
EcoT14I CCWWGG 1 cut(s) 1062
EcoT38I GRGCYC 1 cut(s) 471
ErhI CCWWGG 1 cut(s) 1062
Esp3I CGTCTC 1 cut(s) 1116
FaeI CATG 4 cut(s) 257, 677, 1172, 1182
FatI CATG 4 cut(s) 253, 673, 1168, 1178
Fnu4HI GCNGC 2 cut(s) 216, 905
FokI GGATG 2 cut(s) 1144, 1171
FriOI GRGCYC 1 cut(s) 471
Fsp4HI GCNGC 2 cut(s) 216, 905
FspBI CTAG 2 cut(s) 908, 1022
FspI TGCGCA 1 cut(s) 9
GlaI GCGC 1 cut(s) 9
GluI GCNGC 2 cut(s) 216, 905
GsuI CTGGAG 1 cut(s) 1218
HaeIII GGCC 2 cut(s) 1040, 1061
HapII CCGG 1 cut(s) 244
HgaI GACGC 1 cut(s) 631
HhaI GCGC 1 cut(s) 10
Hin1II CATG 4 cut(s) 257, 677, 1172, 1182
Hin6I GCGC 1 cut(s) 8
HinP1I GCGC 1 cut(s) 8
HincII GTYRAC 1 cut(s) 58
HindII GTYRAC 1 cut(s) 58
HindIII AAGCTT 1 cut(s) 776
HinfI GANTC 3 cut(s) 333, 499, 591
HpaI GTTAAC 1 cut(s) 58
HpaII CCGG 1 cut(s) 244
HphI GGTGA 3 cut(s) 458, 614, 1025
Hpy166II GTNNAC 3 cut(s) 58, 264, 373
Hpy188I TCNGA 7 cut(s) 230, 720, 753, 760, 767, 795, 855
Hpy188III TCNNGA 6 cut(s) 140, 460, 731, 1022, 1028, 1100
Hpy8I GTNNAC 3 cut(s) 58, 264, 373
HpyAV CCTTC 3 cut(s) 94, 1051, 1145
HpyCH4III ACNGT 2 cut(s) 431, 549
HpyCH4V TGCA 8 cut(s) 53, 218, 257, 673, 684, 839, 1095, 1141
HpyF10VI GCNNNNNNNGC 2 cut(s) 35, 971
HpyF3I CTNAG 4 cut(s) 569, 717, 843, 1035
Hsp92II CATG 4 cut(s) 257, 677, 1172, 1182
HspAI GCGC 1 cut(s) 8
KpnI GGTACC 1 cut(s) 186
KspAI GTTAAC 1 cut(s) 58
Kzo9I GATC 3 cut(s) 753, 912, 1024
LmnI GCTCC 3 cut(s) 310, 1154, 1199
Lsp1109I GCAGC 2 cut(s) 202, 891
LweI GCATC 1 cut(s) 1134
MaeI CTAG 2 cut(s) 908, 1022
MaeIII GTNAC 3 cut(s) 302, 524, 549
MalI GATC 3 cut(s) 755, 914, 1026
MboI GATC 3 cut(s) 753, 912, 1024
MfeI CAATTG 1 cut(s) 976
MflI RGATCY 1 cut(s) 753
MhlI GDGCHC 1 cut(s) 471
MluCI AATT 8 cut(s) 199, 210, 286, 344, 455, 630, 966, 976
MmeI TCCRAC 3 cut(s) 258, 496, 599
MseI TTAA 5 cut(s) 57, 72, 209, 782, 1209
MslI CAYNNNNRTG 2 cut(s) 744, 844
MspI CCGG 1 cut(s) 244
MunI CAATTG 1 cut(s) 976
Mva1269I GAATGC 1 cut(s) 1095
MwoI GCNNNNNNNGC 2 cut(s) 35, 971
NdeII GATC 3 cut(s) 753, 912, 1024
NlaIII CATG 4 cut(s) 257, 677, 1172, 1182
NlaIV GGNNCC 2 cut(s) 123, 184
NmuCI GTSAC 1 cut(s) 524
NsbI TGCGCA 1 cut(s) 9
NspI RCATGY 2 cut(s) 257, 1172
OliI CACNNNNGTG 1 cut(s) 844
PceI AGGCCT 2 cut(s) 1040, 1061
PciI ACATGT 1 cut(s) 1168
PctI GAATGC 1 cut(s) 1095
PfeI GAWTC 3 cut(s) 333, 499, 591
PflMI CCANNNNNTGG 1 cut(s) 1196
PkrI GCNGC 2 cut(s) 217, 906
PscI ACATGT 1 cut(s) 1168
Psp124BI GAGCTC 1 cut(s) 471
PspN4I GGNNCC 2 cut(s) 123, 184
PstI CTGCAG 1 cut(s) 220
PsuI RGATCY 1 cut(s) 753
RsaI GTAC 3 cut(s) 184, 668, 1167
RsaNI GTAC 3 cut(s) 183, 667, 1166
RseI CAYNNNNRTG 2 cut(s) 744, 844
SacI GAGCTC 1 cut(s) 471
SaqAI TTAA 5 cut(s) 57, 72, 209, 782, 1209
SatI GCNGC 2 cut(s) 216, 905
Sau3AI GATC 3 cut(s) 753, 912, 1024
SduI GDGCHC 1 cut(s) 471
SfaNI GCATC 1 cut(s) 1134
SfcI CTRYAG 2 cut(s) 216, 922
SmiMI CAYNNNNRTG 2 cut(s) 744, 844
Sse9I AATT 8 cut(s) 199, 210, 286, 344, 455, 630, 966, 976
SseBI AGGCCT 2 cut(s) 1040, 1061
SspI AATATT 1 cut(s) 1072
SspMI CTAG 2 cut(s) 908, 1022
SstI GAGCTC 1 cut(s) 471
StuI AGGCCT 2 cut(s) 1040, 1061
StyI CCWWGG 1 cut(s) 1062
TaaI ACNGT 2 cut(s) 431, 549
TaqI TCGA 4 cut(s) 732, 879, 997, 1117
TasI AATT 8 cut(s) 199, 210, 286, 344, 455, 630, 966, 976
TatI WGTACW 2 cut(s) 666, 1165
TfiI GAWTC 3 cut(s) 333, 499, 591
Tru1I TTAA 5 cut(s) 57, 72, 209, 782, 1209
Tru9I TTAA 5 cut(s) 57, 72, 209, 782, 1209
TscAI CASTG 4 cut(s) 271, 343, 420, 1164
TseFI GTSAC 1 cut(s) 524
TseI GCWGC 2 cut(s) 215, 904
Tsp45I GTSAC 1 cut(s) 524
TspDTI ATGAA 3 cut(s) 76, 576, 750
TspGWI ACGGA 1 cut(s) 1069
TspRI CASTG 4 cut(s) 271, 343, 420, 1164
Van91I CCANNNNNTGG 1 cut(s) 1196
XapI RAATTY 2 cut(s) 286, 455
XbaI TCTAGA 1 cut(s) 1021
XceI RCATGY 2 cut(s) 257, 1172
XcmI CCANNNNNNNNNTGG 1 cut(s) 1129
XspI CTAG 2 cut(s) 908, 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.