Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004140.1

Orthogroup ID

OG0000130

Physical Location & Seq

Genomic Coordinates Reverse (-)

71955 .. 77364

Gene Structure 5410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004140.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

atgaagcaagatgccgccataatgaagcaagatgccgccataaaaggcgccaaccatgggcataacgccatggttgttccttcttgtggccatgacgccatgatgggagatgtaatgcttaggcattttgacgaggtcaagccttcaagcacccccatgatcatccgtaatcttgatcctgaaaaggatcctcttcgtcaaaaggatgatgacgaagatgtgctagaggaggaagtgccttacttaagagatgatggattcagacccatcacacaccaggaacgccgccaacactggcctgcgtccattatccccatcccaaaacgacatgtgttttggaaggttttgctgatgttgggtatctctctgacccacacaaaggtcattcccaatccggttaagtgttcaccatgggaaaagaccgtgacatcttggagtcatcagggggaggcgcagacatcatggggagatgtctacatgttcgtctcgaatcgtgaagggccaagtattggaattcaatttcgtgtggaaattcaagatctgaatgatttagtcgatcaaatcccggccaaaactcttgagttgaaactgaagaggagttttgaagaaacagagagaatggcaggtaactcctcatggctttctccctcgggtgattttgcctttgggtttcagcaacttgaaaacaatgatcttttcttgctttctatatggtttaccaagataccagacaaaaccatagtttggtatgcaaatggggataagcctgcacctgatggttcagttgtgaatttgactgctaacagtgggctagttcttacaagtcctcagggtgaccagttatggaaatccaatcaaaccattgctggcgttgttgctcatggggttatgcacgatacaggtaactttgttctggaaaacgagcagtcagcaaagttatgggaaacgttcaagaatcctactgataccatgttgcctgggcaaatactggaaagaggagggaagctttcttctcgaaattcagagaccgactataggagaggtcacttccagctagattttcaagatgatggaaatcttgtgcttagcggacaaaagccttattattcaaccgggactaccacagggagtgttccaggtagtgaaggtctgcagttggttttcaatgactcaggtaacttctatattctgcgagtgaatggtggatattataaattcacagcagcggaacgtgcagccagggactactatctccggacaactctcagctttgatgggattttggctcaatatttcctcccaaagacttctgttggcaatataagctggtggtttcctctttggtcagagccataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

451

Amino Acids

50.85

Weight (kDa)

5.5

Isoelectric Point (pI)

40.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000130)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43780
malus_domestica	MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica	Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis	pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis	RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata	RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora	Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii	Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa	Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha	Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana	Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1212
Acc36I	ACCTGC	1 cut(s)	614
AccB1I	GGYRCC	1 cut(s)	47
AccB7I	CCANNNNNTGG	2 cut(s)	509, 744
AccI	GTMKAC	1 cut(s)	474
AccIII	TCCGGA	1 cut(s)	1254
AciI	CCGC	5 cut(s)	15, 36, 286, 1089, 1226
AclI	AACGTT	1 cut(s)	947
AclWI	GGATC	3 cut(s)	170, 182, 195
AcoI	YGGCCR	2 cut(s)	88, 567
AcsI	RAATTY	5 cut(s)	513, 531, 790, 1018, 1214
AcuI	CTGAAG	1 cut(s)	611
AcyI	GRCGYC	2 cut(s)	48, 96
AfiI	CCNNNNNNNGG	6 cut(s)	57, 86, 379, 509, 744, 1035
AflII	CTTAAG	1 cut(s)	244
AflIII	ACRYGT	2 cut(s)	328, 477
AjnI	CCWGG	4 cut(s)	276, 976, 1135, 1238
AluBI	AGCT	4 cut(s)	1006, 1054, 1269, 1326
AluI	AGCT	4 cut(s)	1006, 1054, 1269, 1326
Alw26I	GTCTC	2 cut(s)	490, 1019
AlwI	GGATC	3 cut(s)	170, 182, 195
Ama87I	CYCGRG	1 cut(s)	649
Aor13HI	TCCGGA	1 cut(s)	1254
AoxI	GGCC	4 cut(s)	88, 296, 500, 567
ApeKI	GCWGC	2 cut(s)	1223, 1235
ApoI	RAATTY	5 cut(s)	513, 531, 790, 1018, 1214
ArsI	GACNNNNNNTTYG	2 cut(s)	318, 350
AspLEI	GCGC	2 cut(s)	50, 454
AspS9I	GGNCC	1 cut(s)	500
AsuC2I	CCSGG	2 cut(s)	566, 1114
AsuHPI	GGTGA	3 cut(s)	399, 665, 845
AvaI	CYCGRG	1 cut(s)	649
AxyI	CCTNAGG	1 cut(s)	828
BalI	TGGCCA	1 cut(s)	90
BamHI	GGATCC	1 cut(s)	187
BanI	GGYRCC	1 cut(s)	47
BbvI	GCAGC	2 cut(s)	1235, 1247
BccI	CCATC	7 cut(s)	97, 248, 275, 323, 770, 1064, 1268
BciT130I	CCWGG	4 cut(s)	278, 978, 1137, 1240
BclI	TGATCA	1 cut(s)	159
BcnI	CCSGG	2 cut(s)	566, 1114
BcoDI	GTCTC	2 cut(s)	490, 1019
BfaI	CTAG	3 cut(s)	224, 812, 1055
BfmI	CTRYAG	2 cut(s)	1033, 1151
BfoI	RGCGCY	1 cut(s)	51
BfrI	CTTAAG	1 cut(s)	244
BfuAI	ACCTGC	1 cut(s)	614
BglII	AGATCT	1 cut(s)	538
BisI	GCNGC	5 cut(s)	15, 36, 286, 1224, 1236
BlpI	GCTNAGC	1 cut(s)	1085
BlsI	GCNGC	5 cut(s)	16, 37, 287, 1225, 1237
Bme1390I	CCNGG	6 cut(s)	278, 566, 978, 1114, 1137, 1240
BmeT110I	CYCGRG	1 cut(s)	649
BmgT120I	GGNCC	1 cut(s)	500
BmiI	GGNNCC	2 cut(s)	49, 189
BmrFI	CCNGG	6 cut(s)	278, 566, 978, 1114, 1137, 1240
BmsI	GCATC	1 cut(s)	22
Bpu10I	CCTNAGC	1 cut(s)	119
Bpu1102I	GCTNAGC	1 cut(s)	1085
BpuEI	CTTGAG	1 cut(s)	599
BpuMI	CCSGG	2 cut(s)	566, 1114
BsaBI	GATNNNNATC	1 cut(s)	1074
BsaHI	GRCGYC	2 cut(s)	48, 96
BsaI	GGTCTC	1 cut(s)	1019
BsaJI	CCNNGG	6 cut(s)	55, 69, 410, 648, 977, 1239
BsaWI	WCCGGW	2 cut(s)	394, 1254
Bsc4I	CCNNNNNNNGG	6 cut(s)	57, 86, 379, 509, 744, 1035
Bse1I	ACTGG	3 cut(s)	299, 838, 993
Bse21I	CCTNAGG	1 cut(s)	828
Bse3DI	GCAATG	1 cut(s)	861
Bse8I	GATNNNNATC	1 cut(s)	1074
BseAI	TCCGGA	1 cut(s)	1254
BseBI	CCWGG	4 cut(s)	278, 978, 1137, 1240
BseDI	CCNNGG	6 cut(s)	55, 69, 410, 648, 977, 1239
BseGI	GGATG	3 cut(s)	162, 211, 315
BseJI	GATNNNNATC	1 cut(s)	1074
BseLI	CCNNNNNNNGG	6 cut(s)	57, 86, 379, 509, 744, 1035
BseMI	GCAATG	1 cut(s)	861
BseMII	CTCAG	3 cut(s)	842, 1185, 1279
BseNI	ACTGG	3 cut(s)	299, 838, 993
BseRI	GAGGAG	4 cut(s)	242, 610, 622, 1011
BseXI	GCAGC	2 cut(s)	1235, 1247
BsgI	GTGCAG	2 cut(s)	753, 1254
BshFI	GGCC	4 cut(s)	90, 298, 502, 569
BshNI	GGYRCC	1 cut(s)	47
BsiHKCI	CYCGRG	1 cut(s)	649
BsiSI	CCGG	4 cut(s)	395, 566, 1113, 1255
BslFI	GGGAC	2 cut(s)	1129, 1256
BslI	CCNNNNNNNGG	6 cut(s)	57, 86, 379, 509, 744, 1035
BsmAI	GTCTC	2 cut(s)	490, 1019
BsmBI	CGTCTC	1 cut(s)	490
BsmFI	GGGAC	2 cut(s)	1129, 1256
BsnI	GGCC	4 cut(s)	90, 298, 502, 569
Bso31I	GGTCTC	1 cut(s)	1019
BsoBI	CYCGRG	1 cut(s)	649
Bsp13I	TCCGGA	1 cut(s)	1254
Bsp143I	GATC	6 cut(s)	159, 175, 187, 538, 556, 691
Bsp1720I	GCTNAGC	1 cut(s)	1085
Bsp19I	CCATGG	3 cut(s)	55, 69, 410
BspACI	CCGC	5 cut(s)	15, 36, 286, 1089, 1226
BspANI	GGCC	4 cut(s)	90, 298, 502, 569
BspCNI	CTCAG	3 cut(s)	841, 1184, 1278
BspEI	TCCGGA	1 cut(s)	1254
BspLI	GGNNCC	2 cut(s)	49, 189
BspMAI	CTGCAG	1 cut(s)	1155
BspMI	ACCTGC	1 cut(s)	614
BspPI	GGATC	3 cut(s)	170, 182, 195
BspT107I	GGYRCC	1 cut(s)	47
BspTI	CTTAAG	1 cut(s)	244
BspTNI	GGTCTC	1 cut(s)	1019
BsrDI	GCAATG	1 cut(s)	861
BsrI	ACTGG	3 cut(s)	299, 838, 993
BssECI	CCNNGG	6 cut(s)	55, 69, 410, 648, 977, 1239
BssMI	GATC	6 cut(s)	159, 175, 187, 538, 556, 691
BssNI	GRCGYC	2 cut(s)	48, 96
BssT1I	CCWWGG	3 cut(s)	55, 69, 410
Bst2UI	CCWGG	4 cut(s)	278, 978, 1137, 1240
Bst4CI	ACNGT	2 cut(s)	424, 806
Bst6I	CTCTTC	2 cut(s)	198, 587
BstACI	GRCGYC	2 cut(s)	48, 96
BstAFI	CTTAAG	1 cut(s)	244
BstC8I	GCNNGC	3 cut(s)	300, 768, 868
BstDEI	CTNAG	5 cut(s)	119, 828, 1085, 1171, 1265
BstDSI	CCRYGG	3 cut(s)	55, 69, 410
BstEII	GGTNACC	1 cut(s)	833
BstF5I	GGATG	3 cut(s)	162, 211, 315
BstH2I	RGCGCY	1 cut(s)	51
BstHHI	GCGC	2 cut(s)	50, 454
BstKTI	GATC	6 cut(s)	162, 178, 190, 541, 559, 694
BstMAI	GTCTC	2 cut(s)	490, 1019
BstMBI	GATC	6 cut(s)	159, 175, 187, 538, 556, 691
BstMWI	GCNNNNNNNGC	2 cut(s)	1232, 1323
BstNI	CCWGG	4 cut(s)	278, 978, 1137, 1240
BstNSI	RCATGY	2 cut(s)	332, 481
BstPI	GGTNACC	1 cut(s)	833
BstSCI	CCNGG	6 cut(s)	276, 564, 976, 1112, 1135, 1238
BstSFI	CTRYAG	2 cut(s)	1033, 1151
BstV1I	GCAGC	2 cut(s)	1235, 1247
BstX2I	RGATCY	2 cut(s)	187, 538
BstYI	RGATCY	2 cut(s)	187, 538
Bsu36I	CCTNAGG	1 cut(s)	828
BsuRI	GGCC	4 cut(s)	90, 298, 502, 569
BtgI	CCRYGG	3 cut(s)	55, 69, 410
BtsCI	GGATG	3 cut(s)	162, 211, 315
BtsIMutI	CAGTG	2 cut(s)	292, 811
BveI	ACCTGC	1 cut(s)	614
Cac8I	GCNNGC	3 cut(s)	300, 768, 868
CfoI	GCGC	2 cut(s)	50, 454
Cfr13I	GGNCC	1 cut(s)	500
CseI	GACGC	2 cut(s)	104, 291
DdeI	CTNAG	5 cut(s)	119, 828, 1085, 1171, 1265
DinI	GGCGCC	1 cut(s)	49
DpnI	GATC	6 cut(s)	161, 177, 189, 540, 558, 693
DpnII	GATC	6 cut(s)	159, 175, 187, 538, 556, 691
EaeI	YGGCCR	2 cut(s)	88, 567
Eam1104I	CTCTTC	2 cut(s)	198, 587
EarI	CTCTTC	2 cut(s)	198, 587
Eco130I	CCWWGG	3 cut(s)	55, 69, 410
Eco31I	GGTCTC	1 cut(s)	1019
Eco57I	CTGAAG	1 cut(s)	611
Eco81I	CCTNAGG	1 cut(s)	828
Eco88I	CYCGRG	1 cut(s)	649
Eco91I	GGTNACC	1 cut(s)	833
EcoO65I	GGTNACC	1 cut(s)	833
EcoRI	GAATTC	1 cut(s)	513
EcoRII	CCWGG	4 cut(s)	276, 976, 1135, 1238
EcoT14I	CCWWGG	3 cut(s)	55, 69, 410
EgeI	GGCGCC	1 cut(s)	49
EheI	GGCGCC	1 cut(s)	49
ErhI	CCWWGG	3 cut(s)	55, 69, 410
Esp3I	CGTCTC	1 cut(s)	490
FaqI	GGGAC	2 cut(s)	1129, 1256
FbaI	TGATCA	1 cut(s)	159
FblI	GTMKAC	1 cut(s)	474
Fnu4HI	GCNGC	5 cut(s)	15, 36, 286, 1224, 1236
FokI	GGATG	3 cut(s)	149, 218, 302
Fsp4HI	GCNGC	5 cut(s)	15, 36, 286, 1224, 1236
FspBI	CTAG	3 cut(s)	224, 812, 1055
GlaI	GCGC	2 cut(s)	49, 453
GluI	GCNGC	5 cut(s)	15, 36, 286, 1224, 1236
HaeII	RGCGCY	1 cut(s)	51
HaeIII	GGCC	4 cut(s)	90, 298, 502, 569
HapII	CCGG	4 cut(s)	395, 566, 1113, 1255
HgaI	GACGC	2 cut(s)	104, 291
HhaI	GCGC	2 cut(s)	50, 454
Hin1I	GRCGYC	2 cut(s)	48, 96
Hin6I	GCGC	2 cut(s)	48, 452
HinP1I	GCGC	2 cut(s)	48, 452
HindIII	AAGCTT	1 cut(s)	1004
HinfI	GANTC	5 cut(s)	258, 436, 490, 955, 1169
HpaII	CCGG	4 cut(s)	395, 566, 1113, 1255
HphI	GGTGA	3 cut(s)	399, 665, 845
Hpy166II	GTNNAC	3 cut(s)	407, 475, 717
Hpy188I	TCNGA	5 cut(s)	263, 369, 543, 1024, 1348
Hpy8I	GTNNAC	3 cut(s)	407, 475, 717
HpyAV	CCTTC	5 cut(s)	90, 153, 334, 491, 1139
HpyCH4III	ACNGT	2 cut(s)	424, 806
HpyCH4IV	ACGT	2 cut(s)	947, 1231
HpyCH4V	TGCA	5 cut(s)	752, 770, 892, 1153, 1235
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1232, 1323
HpyF3I	CTNAG	5 cut(s)	119, 828, 1085, 1171, 1265
HpySE526I	ACGT	2 cut(s)	947, 1231
Hsp92I	GRCGYC	2 cut(s)	48, 96
HspAI	GCGC	2 cut(s)	48, 452
KasI	GGCGCC	1 cut(s)	47
Kpn2I	TCCGGA	1 cut(s)	1254
Ksp22I	TGATCA	1 cut(s)	159
Kzo9I	GATC	6 cut(s)	159, 175, 187, 538, 556, 691
Lsp1109I	GCAGC	2 cut(s)	1235, 1247
LweI	GCATC	1 cut(s)	22
MaeI	CTAG	3 cut(s)	224, 812, 1055
MaeII	ACGT	2 cut(s)	947, 1231
MaeIII	GTNAC	6 cut(s)	424, 626, 833, 902, 1043, 1175
MalI	GATC	6 cut(s)	161, 177, 189, 540, 558, 693
MboI	GATC	6 cut(s)	159, 175, 187, 538, 556, 691
MboII	GAAGA	5 cut(s)	185, 227, 604, 617, 1002
MflI	RGATCY	2 cut(s)	187, 538
MlsI	TGGCCA	1 cut(s)	90
MluCI	AATT	6 cut(s)	513, 518, 531, 790, 1018, 1214
MluNI	TGGCCA	1 cut(s)	90
Mly113I	GGCGCC	1 cut(s)	48
MlyI	GAGTC	2 cut(s)	445, 1163
Mox20I	TGGCCA	1 cut(s)	90
MroI	TCCGGA	1 cut(s)	1254
MscI	TGGCCA	1 cut(s)	90
MseI	TTAA	2 cut(s)	245, 399
MslI	CAYNNNNRTG	1 cut(s)	155
Msp20I	TGGCCA	1 cut(s)	90
MspA1I	CMGCKG	1 cut(s)	1226
MspCI	CTTAAG	1 cut(s)	244
MspI	CCGG	4 cut(s)	395, 566, 1113, 1255
MspR9I	CCNGG	6 cut(s)	278, 566, 978, 1114, 1137, 1240
MvaI	CCWGG	4 cut(s)	278, 978, 1137, 1240
MwoI	GCNNNNNNNGC	2 cut(s)	1232, 1323
NarI	GGCGCC	1 cut(s)	48
NciI	CCSGG	2 cut(s)	566, 1114
NcoI	CCATGG	3 cut(s)	55, 69, 410
NdeII	GATC	6 cut(s)	159, 175, 187, 538, 556, 691
NlaIV	GGNNCC	2 cut(s)	49, 189
NmuCI	GTSAC	3 cut(s)	424, 833, 1043
NspI	RCATGY	2 cut(s)	332, 481
PciI	ACATGT	2 cut(s)	328, 477
PfeI	GAWTC	3 cut(s)	258, 490, 955
PflFI	GACNNNGTC	1 cut(s)	134
PflMI	CCANNNNNTGG	2 cut(s)	509, 744
PkrI	GCNGC	5 cut(s)	16, 37, 287, 1225, 1237
PleI	GAGTC	2 cut(s)	444, 1163
PluTI	GGCGCC	1 cut(s)	51
PpsI	GAGTC	2 cut(s)	444, 1163
PscI	ACATGT	2 cut(s)	328, 477
PsiI	TTATAA	1 cut(s)	1212
Psp1406I	AACGTT	1 cut(s)	947
Psp6I	CCWGG	4 cut(s)	276, 976, 1135, 1238
PspEI	GGTNACC	1 cut(s)	833
PspGI	CCWGG	4 cut(s)	276, 976, 1135, 1238
PspN4I	GGNNCC	2 cut(s)	49, 189
PspPI	GGNCC	1 cut(s)	500
PstI	CTGCAG	1 cut(s)	1155
PsuI	RGATCY	2 cut(s)	187, 538
PsyI	GACNNNGTC	1 cut(s)	134
RseI	CAYNNNNRTG	1 cut(s)	155
SaqAI	TTAA	2 cut(s)	245, 399
SatI	GCNGC	5 cut(s)	15, 36, 286, 1224, 1236
Sau3AI	GATC	6 cut(s)	159, 175, 187, 538, 556, 691
Sau96I	GGNCC	1 cut(s)	500
SchI	GAGTC	2 cut(s)	445, 1163
ScrFI	CCNGG	6 cut(s)	278, 566, 978, 1114, 1137, 1240
SfaNI	GCATC	1 cut(s)	22
SfcI	CTRYAG	2 cut(s)	1033, 1151
SfoI	GGCGCC	1 cut(s)	49
SmiMI	CAYNNNNRTG	1 cut(s)	155
SmlI	CTYRAG	2 cut(s)	244, 578
SmoI	CTYRAG	2 cut(s)	244, 578
Sse9I	AATT	6 cut(s)	513, 518, 531, 790, 1018, 1214
SsiI	CCGC	5 cut(s)	15, 36, 286, 1089, 1226
SspDI	GGCGCC	1 cut(s)	47
SspI	AATATT	1 cut(s)	1292
SspMI	CTAG	3 cut(s)	224, 812, 1055
StyD4I	CCNGG	6 cut(s)	276, 564, 976, 1112, 1135, 1238
StyI	CCWWGG	3 cut(s)	55, 69, 410
TaaI	ACNGT	2 cut(s)	424, 806
TaiI	ACGT	2 cut(s)	950, 1234
TaqI	TCGA	3 cut(s)	488, 555, 1015
TaqII	GACCGA	1 cut(s)	1043
TasI	AATT	6 cut(s)	513, 518, 531, 790, 1018, 1214
TauI	GCSGC	3 cut(s)	17, 38, 288
TfiI	GAWTC	3 cut(s)	258, 490, 955
Tru1I	TTAA	2 cut(s)	245, 399
Tru9I	TTAA	2 cut(s)	245, 399
TscAI	CASTG	2 cut(s)	299, 811
TseFI	GTSAC	3 cut(s)	424, 833, 1043
TseI	GCWGC	2 cut(s)	1223, 1235
Tsp45I	GTSAC	3 cut(s)	424, 833, 1043
TspDTI	ATGAA	2 cut(s)	17, 38
TspGWI	ACGGA	1 cut(s)	155
TspRI	CASTG	2 cut(s)	299, 811
Tth111I	GACNNNGTC	1 cut(s)	134
Van91I	CCANNNNNTGG	2 cut(s)	509, 744
Vha464I	CTTAAG	1 cut(s)	244
XapI	RAATTY	5 cut(s)	513, 531, 790, 1018, 1214
XceI	RCATGY	2 cut(s)	332, 481
XmiI	GTMKAC	1 cut(s)	474
XspI	CTAG	3 cut(s)	224, 812, 1055

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.