Rorug05G0462000

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
63626945 .. 63629506
2562 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0462000.1

Sequence Viewer

Length: 2562 bp
ATGCAAGACTTTGAGGCAATTGTGAGCACTATGTCAAAGGGTGGACTTCCTGAAGGTGAGTTCAAGATGCGGTTGTTTCCTTTCTCACTTAGAGATGATGCAAAGGGATGGTTTTTGAAGCTACAACCGAGGAGTATACGATCATGGGATGAGTTGACGGATACTTTCTTGGATGCTTACTACCCACCACACAAGACCACTAGCATGAGACATGAGCTCTTACTCTTCACTCAACATGATCATGAGACCTTTTGGGAGGCATGGGATAGGTACAAGGATATTTGCAATGCATGTCCCCATCATGGCTTGACTAAATCTATGATGATTGAAGGTTTCTATGGTGGTTTGTTACCACATGAGAGGAGGAGGGTTGATGTTGCCGCACAAGGTTCTCTTCATAGTCATGGTCAAACCGAGGCATGGGATATACTTGAGCACTTGGGTCGACAATCGAGGCAATGGGATGATCATGACTCTAGGAGGGAAAGATTAAGGAAAGATCCATATTATGACACCAAGAGCACTCATGAGACAAGGGTTGCCCAAGAGAGCTCTAGTGCCGATTATAGAAAGCTTGAGAGGAAGCTTGATTTACTTCTTCAAGCTCAAGAGCGTGGTTCATCTACACATCATGTCAAGGCCGCTTCTATGTCTTCATCTCTATGTCTTTTATGTGATTCACCTACACATGCTACTAGTGAGTGTCATCTTGCCCCTAATTATCCGGATTTTGTTCAAGAGCAAGTAAAGGCCGTGAATTCTTATGGTGGGCACCCTAGAAATGATCCTTACTCACCTACATACAATCCGGGTTGGAGGAATCACCCTAATTTTTCTTGGAGAGACCAAGGAGGTTCATCTAGTGGGTTTCAAGGTGGAAAGCAAAGCTTTAGAGGTGGCCAAGGTCAAGACCTATCAAATTTTGCTCATTATGGCAATGCACACCAAGGAAACACTCAAATTTCACAATTTGGTCAACATGGACAGCAAGCGTATGGGCCTAACTCTCAATGCCAATCCACCTCAAGTCAAGGATTTCATGCTCAAAATGCTCCTCCCGGGTTCACTCAAGGTGGTGGCTATGGTCCTAACAAGTTTCAAGGTGTTCCCATTGCATCACAACCGGAGGAGAAGAAGAGTGCAAGTGAGGATGCTCTTTCTTCTATGTCTCAATGCATTACTATATTATCTCAAGGTCAAGCCACCATGCAAAAACAAATGGGACTATTAGAAGTGCAAATGAGTCAAATGGCAAAGGAGCTTAGCACACGTCAACAAGGAGCCTTACCTTCACAACCGGAGCCAAACCCAAGAGGAAAACTTGAATCAACCGGAGCTTACCTTCACCCGTCCACCCGAGAGTTTAGAATATTTGAATCAACAAGACAGGCCATGGATGAGCTGATTAAGGCGCTGATAGATGATGAGGTCACCATCGCTGGGGTTTATGGCATGGGAGGTGTTGGCAAGACAACCATGGTGAGAAATGTTGCTCTACAAGCACGAAAAAATGGGCTCTTTGATCATGTGATTGTGGCTGTCGTATCCCAAGACCCCAACTTTAGAAGGAGTCAACAGCAATTGGCAGAGCAGCTCGACTTGAGATTGGAGGGGACGGAATCTGAAACAGCCGATAGATTGAAGGAGAGGATAATGGAAGGAAAGAGGATCCTTATAATCTTGGACGACATTTGGGAAAGCATAGACTTGTCACTTATAGGAATTCCCAACCCCGATGAGCTTAAGCGACGCAACTCTAAAGTCCTAATCACCACAAGAAGATTGGATGTTTGCCGCTCCATGAAGAGCCAAGCAAGTTTTCTTCTCAGTATATTATCTAAAGAAGATTCTTGGAAACTTTTTGTGGATTGTTCGAGAATATCTTTTGATGAATCTACCAATATCTATCGAGCGAGGGCGATAGTTAGAGAATGTGGTGGTCTGCCCGTTGCATTGAAAGCAATTGCACGGGCACTTGAAGATAAAGACATGGCTGAATGGAATATAGCAGTTCAACAATTGAGGGCATCTCAAATTGCCAGTCTTGATGATCAGGGTCCTGCGTTCAAATGTATAAAGTTAAGCTATGACTACTTGAGATCTGATGATGCCAAATCATTCTTCTTGCTTTGCTCCCTATTCCCAGAAGACTATGATATCCCTATCAAAGACTTGTTCAAGTATGCTATCGGGAACGGATTGCTTCGAGAAGCCGCCACAATCCAAGAAGCCAGAGATAGAGCAAATTCGGTGATCAAGTACCTCAAAGCTTCCAGCTTACTTTTGGACAGTCCAAAGGAGGGATGCGTAAAGATGCATGATGTTGTTCGGGATACAGCCAAGTCAATTCCAAGGTATGAGGATGATCATGGATTTTGCGTAAAAGCTGGTTGTGGATTAAAGGAGTTTCGAGGGACCACTGGGCATGGAGACTGCTCTGCCATCTCACTAATGATGAATGATATTGATTGGCTTCCTGAAGAGTTGGTATGTCCAAAACTCCAGATTTTGTTACTACAAAACAATGTTCATATAGATGAGATCCCAGAAACTTTTTTTTGA

Protein Analysis

853

Amino Acids

95.99

Weight (kDa)

6.18

Isoelectric Point (pI)

49.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotrans_gag PF03732 24 - 117 1.3e-20 Retrotransposon gag protein
NB-ARC PF00931 463 - 622 3.4e-33 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1676
AccB1I GGYRCC 1 cut(s) 771
AccBSI CCGCTC 1 cut(s) 1797
AccI GTMKAC 2 cut(s) 136, 445
AccIII TCCGGA 1 cut(s) 724
AciI CCGC 5 cut(s) 70, 381, 642, 1795, 2214
AclWI GGATC 5 cut(s) 494, 779, 1663, 1676, 2536
AcoI YGGCCR 1 cut(s) 898
AcsI RAATTY 5 cut(s) 757, 919, 960, 1722, 2245
AcuI CTGAAG 2 cut(s) 72, 2499
AfaI GTAC 2 cut(s) 272, 2261
AfiI CCNNNNNNNGG 4 cut(s) 302, 420, 1440, 2300
AflII CTTAAG 1 cut(s) 1742
AflIII ACRYGT 1 cut(s) 1268
AhlI ACTAGT 1 cut(s) 695
AjiI CACGTC 1 cut(s) 1271
AjuI GAANNNNNNNTTGG 4 cut(s) 1803, 1835, 2105, 2137
Alw21I GWGCWC 5 cut(s) 29, 219, 438, 524, 554
Alw26I GTCTC 6 cut(s) 202, 239, 524, 837, 1173, 2424
AlwI GGATC 5 cut(s) 494, 779, 1663, 1676, 2536
Ama87I CYCGRG 2 cut(s) 1058, 1356
Aor13HI TCCGGA 1 cut(s) 724
AoxI GGCC 5 cut(s) 639, 750, 898, 998, 1389
ApeKI GCWGC 1 cut(s) 1591
ApoI RAATTY 5 cut(s) 757, 919, 960, 1722, 2245
ArsI GACNNNNNNTTYG 2 cut(s) 2026, 2058
AspLEI GCGC 1 cut(s) 1414
AspS9I GGNCC 4 cut(s) 998, 1085, 2057, 2415
AsuC2I CCSGG 3 cut(s) 810, 1059, 1060
AsuHPI GGTGA 9 cut(s) 68, 672, 786, 815, 1337, 1423, 1492, 1762, 2263
AvaI CYCGRG 2 cut(s) 1058, 1356
AvaII GGWCC 3 cut(s) 1085, 2057, 2415
BaeGI GKGCMC 2 cut(s) 774, 1975
BalI TGGCCA 1 cut(s) 900
BamHI GGATCC 1 cut(s) 1668
BanI GGYRCC 1 cut(s) 771
BanII GRGCYC 3 cut(s) 219, 554, 1518
BbsI GAAGAC 2 cut(s) 645, 2154
Bbv12I GWGCWC 5 cut(s) 29, 219, 438, 524, 554
BbvI GCAGC 1 cut(s) 1603
BccI CCATC 4 cut(s) 102, 306, 1442, 2450
BceAI ACGGC 1 cut(s) 737
BcgI CGANNNNNNTGC 2 cut(s) 425, 459
BciVI GTATCC 3 cut(s) 154, 1555, 2326
BclI TGATCA 6 cut(s) 238, 466, 1522, 2050, 2253, 2365
BcnI CCSGG 3 cut(s) 810, 1059, 1060
BcoDI GTCTC 6 cut(s) 202, 239, 524, 837, 1173, 2424
BcuI ACTAGT 1 cut(s) 695
BfaI CTAG 6 cut(s) 201, 477, 555, 696, 777, 861
BfoI RGCGCY 1 cut(s) 1415
BfrI CTTAAG 1 cut(s) 1742
BfuI GTATCC 3 cut(s) 154, 1555, 2326
BglII AGATCT 1 cut(s) 2099
BisI GCNGC 5 cut(s) 381, 642, 1592, 1795, 2214
BlpI GCTNAGC 1 cut(s) 1262
BlsI GCNGC 5 cut(s) 382, 643, 1593, 1796, 2215
Bme1390I CCNGG 3 cut(s) 810, 1059, 1060
Bme18I GGWCC 3 cut(s) 1085, 2057, 2415
BmeT110I CYCGRG 2 cut(s) 1058, 1356
BmgBI CACGTC 1 cut(s) 1271
BmgT120I GGNCC 4 cut(s) 998, 1085, 2057, 2415
BmiI GGNNCC 6 cut(s) 773, 1282, 1302, 1670, 2058, 2416
BmrFI CCNGG 3 cut(s) 810, 1059, 1060
BmrI ACTGGG 1 cut(s) 2430
BmsI GCATC 9 cut(s) 57, 88, 163, 1124, 1141, 2036, 2098, 2294, 2304
BmuI ACTGGG 1 cut(s) 2430
BpiI GAAGAC 2 cut(s) 645, 2154
BplI GAGNNNNNCTC 2 cut(s) 2014, 2046
BpmI CTGGAG 1 cut(s) 2486
Bpu1102I GCTNAGC 1 cut(s) 1262
BpuEI CTTGAG 8 cut(s) 452, 591, 596, 1009, 1053, 1176, 1621, 2116
BpuMI CCSGG 3 cut(s) 810, 1059, 1060
BsaI GGTCTC 2 cut(s) 239, 837
BsaJI CCNNGG 9 cut(s) 128, 414, 847, 901, 946, 1058, 1392, 1476, 2351
BsaWI WCCGGW 4 cut(s) 724, 1123, 1297, 1331
Bsc4I CCNNNNNNNGG 4 cut(s) 302, 420, 1440, 2300
Bse1I ACTGG 2 cut(s) 2040, 2425
Bse3DI GCAATG 4 cut(s) 292, 464, 943, 1110
BseAI TCCGGA 1 cut(s) 724
BseDI CCNNGG 9 cut(s) 128, 414, 847, 901, 946, 1058, 1392, 1476, 2351
BseGI GGATG 9 cut(s) 113, 154, 178, 469, 1156, 1402, 1792, 2309, 2368
BseLI CCNNNNNNNGG 4 cut(s) 302, 420, 1440, 2300
BseMI GCAATG 4 cut(s) 292, 464, 943, 1110
BseMII CTCAG 1 cut(s) 1840
BseNI ACTGG 2 cut(s) 2040, 2425
BseRI GAGGAG 5 cut(s) 145, 376, 379, 1044, 1142
BseSI GKGCMC 2 cut(s) 774, 1975
BseXI GCAGC 1 cut(s) 1603
BseYI CCCAGC 1 cut(s) 1439
BshFI GGCC 5 cut(s) 641, 752, 900, 1000, 1391
BshNI GGYRCC 1 cut(s) 771
BsiHKAI GWGCWC 5 cut(s) 29, 219, 438, 524, 554
BsiHKCI CYCGRG 2 cut(s) 1058, 1356
BsiSI CCGG 6 cut(s) 725, 809, 1059, 1124, 1298, 1332
BslFI GGGAC 4 cut(s) 279, 1236, 1627, 2428
BslI CCNNNNNNNGG 4 cut(s) 302, 420, 1440, 2300
BsmAI GTCTC 6 cut(s) 202, 239, 524, 837, 1173, 2424
BsmFI GGGAC 4 cut(s) 279, 1236, 1627, 2428
BsnI GGCC 5 cut(s) 641, 752, 900, 1000, 1391
Bso31I GGTCTC 2 cut(s) 239, 837
BsoBI CYCGRG 2 cut(s) 1058, 1356
Bsp1286I GDGCHC 8 cut(s) 29, 219, 438, 524, 554, 774, 1518, 1975
Bsp13I TCCGGA 1 cut(s) 724
Bsp1720I GCTNAGC 1 cut(s) 1262
Bsp19I CCATGG 2 cut(s) 1392, 1476
BspACI CCGC 5 cut(s) 70, 381, 642, 1795, 2214
BspANI GGCC 5 cut(s) 641, 752, 900, 1000, 1391
BspCNI CTCAG 1 cut(s) 1839
BspEI TCCGGA 1 cut(s) 724
BspHI TCATGA 3 cut(s) 241, 469, 526
BspLI GGNNCC 6 cut(s) 773, 1282, 1302, 1670, 2058, 2416
BspPI GGATC 5 cut(s) 494, 779, 1663, 1676, 2536
BspQI GCTCTTC 1 cut(s) 1799
BspT107I GGYRCC 1 cut(s) 771
BspTI CTTAAG 1 cut(s) 1742
BspTNI GGTCTC 2 cut(s) 239, 837
BsrBI CCGCTC 1 cut(s) 1797
BsrDI GCAATG 4 cut(s) 292, 464, 943, 1110
BsrI ACTGG 2 cut(s) 2040, 2425
BssECI CCNNGG 9 cut(s) 128, 414, 847, 901, 946, 1058, 1392, 1476, 2351
BssNAI GTATAC 1 cut(s) 137
BssT1I CCWWGG 6 cut(s) 847, 901, 946, 1392, 1476, 2351
Bst1107I GTATAC 1 cut(s) 137
Bst4CI ACNGT 1 cut(s) 2291
Bst6I CTCTTC 5 cut(s) 230, 399, 1130, 1799, 2475
BstAFI CTTAAG 1 cut(s) 1742
BstC8I GCNNGC 1 cut(s) 990
BstDEI CTNAG 3 cut(s) 89, 1262, 1826
BstDSI CCRYGG 2 cut(s) 1392, 1476
BstEII GGTNACC 1 cut(s) 1429
BstF5I GGATG 9 cut(s) 113, 154, 178, 469, 1156, 1402, 1792, 2309, 2368
BstH2I RGCGCY 1 cut(s) 1415
BstHHI GCGC 1 cut(s) 1414
BstMAI GTCTC 6 cut(s) 202, 239, 524, 837, 1173, 2424
BstMWI GCNNNNNNNGC 3 cut(s) 1049, 1499, 1958
BstNSI RCATGY 2 cut(s) 294, 692
BstPI GGTNACC 1 cut(s) 1429
BstSCI CCNGG 3 cut(s) 808, 1057, 1058
BstSLI GKGCMC 2 cut(s) 774, 1975
BstV1I GCAGC 1 cut(s) 1603
BstV2I GAAGAC 2 cut(s) 645, 2154
BstX2I RGATCY 4 cut(s) 499, 1668, 2099, 2541
BstYI RGATCY 4 cut(s) 499, 1668, 2099, 2541
BstZ17I GTATAC 1 cut(s) 137
BsuI GTATCC 3 cut(s) 154, 1555, 2326
BsuRI GGCC 5 cut(s) 641, 752, 900, 1000, 1391
BtgI CCRYGG 2 cut(s) 1392, 1476
BtgZI GCGATG 1 cut(s) 1420
BtrI CACGTC 1 cut(s) 1271
BtsCI GGATG 9 cut(s) 113, 154, 178, 469, 1156, 1402, 1792, 2309, 2368
BtsIMutI CAGTG 1 cut(s) 2418
Cac8I GCNNGC 1 cut(s) 990
CciI TCATGA 3 cut(s) 241, 469, 526
CfoI GCGC 1 cut(s) 1414
Cfr13I GGNCC 4 cut(s) 998, 1085, 2057, 2415
Cfr9I CCCGGG 1 cut(s) 1058
CseI GACGC 1 cut(s) 1758
Csp6I GTAC 2 cut(s) 271, 2260
CviQI GTAC 2 cut(s) 271, 2260
DdeI CTNAG 3 cut(s) 89, 1262, 1826
EaeI YGGCCR 1 cut(s) 898
Eam1104I CTCTTC 5 cut(s) 230, 399, 1130, 1799, 2475
EarI CTCTTC 5 cut(s) 230, 399, 1130, 1799, 2475
Ecl136II GAGCTC 2 cut(s) 217, 552
Eco130I CCWWGG 6 cut(s) 847, 901, 946, 1392, 1476, 2351
Eco24I GRGCYC 3 cut(s) 219, 554, 1518
Eco31I GGTCTC 2 cut(s) 239, 837
Eco32I GATATC 1 cut(s) 2158
Eco47I GGWCC 3 cut(s) 1085, 2057, 2415
Eco53kI GAGCTC 2 cut(s) 217, 552
Eco57I CTGAAG 2 cut(s) 72, 2499
Eco88I CYCGRG 2 cut(s) 1058, 1356
Eco91I GGTNACC 1 cut(s) 1429
EcoICRI GAGCTC 2 cut(s) 217, 552
EcoO109I RGGNCCY 1 cut(s) 2057
EcoO65I GGTNACC 1 cut(s) 1429
EcoRI GAATTC 2 cut(s) 757, 1722
EcoRV GATATC 1 cut(s) 2158
EcoT14I CCWWGG 6 cut(s) 847, 901, 946, 1392, 1476, 2351
EcoT22I ATGCAT 3 cut(s) 292, 1178, 2319
EcoT38I GRGCYC 3 cut(s) 219, 554, 1518
ErhI CCWWGG 6 cut(s) 847, 901, 946, 1392, 1476, 2351
FalI AAGNNNNNCTT 4 cut(s) 378, 410, 872, 904
FaqI GGGAC 4 cut(s) 279, 1236, 1627, 2428
FbaI TGATCA 6 cut(s) 238, 466, 1522, 2050, 2253, 2365
FblI GTMKAC 2 cut(s) 136, 445
Fnu4HI GCNGC 5 cut(s) 381, 642, 1592, 1795, 2214
FokI GGATG 9 cut(s) 120, 161, 185, 476, 1163, 1409, 1799, 2316, 2375
FriOI GRGCYC 3 cut(s) 219, 554, 1518
Fsp4HI GCNGC 5 cut(s) 381, 642, 1592, 1795, 2214
FspBI CTAG 6 cut(s) 201, 477, 555, 696, 777, 861
GlaI GCGC 1 cut(s) 1413
GluI GCNGC 5 cut(s) 381, 642, 1592, 1795, 2214
GsaI CCCAGC 1 cut(s) 1443
GsuI CTGGAG 1 cut(s) 2486
HaeII RGCGCY 1 cut(s) 1415
HaeIII GGCC 5 cut(s) 641, 752, 900, 1000, 1391
HapII CCGG 6 cut(s) 725, 809, 1059, 1124, 1298, 1332
HgaI GACGC 1 cut(s) 1758
HhaI GCGC 1 cut(s) 1414
Hin6I GCGC 1 cut(s) 1412
HinP1I GCGC 1 cut(s) 1412
HincII GTYRAC 5 cut(s) 156, 446, 977, 1274, 1574
HindII GTYRAC 5 cut(s) 156, 446, 977, 1274, 1574
HindIII AAGCTT 4 cut(s) 572, 584, 886, 2268
HpaII CCGG 6 cut(s) 725, 809, 1059, 1124, 1298, 1332
HphI GGTGA 9 cut(s) 68, 672, 786, 815, 1337, 1423, 1492, 1762, 2263
Hpy166II GTNNAC 9 cut(s) 44, 137, 156, 446, 977, 1065, 1274, 1353, 1574
Hpy188I TCNGA 2 cut(s) 1624, 2104
Hpy8I GTNNAC 9 cut(s) 44, 137, 156, 446, 977, 1065, 1274, 1353, 1574
Hpy99I CGWCG 1 cut(s) 1752
HpyAV CCTTC 7 cut(s) 47, 323, 1299, 1352, 1560, 1636, 1652
HpyCH4III ACNGT 1 cut(s) 2291
HpyCH4IV ACGT 1 cut(s) 1270
HpyF10VI GCNNNNNNNGC 3 cut(s) 1049, 1499, 1958
HpyF3I CTNAG 3 cut(s) 89, 1262, 1826
HpySE526I ACGT 1 cut(s) 1270
HspAI GCGC 1 cut(s) 1412
Kpn2I TCCGGA 1 cut(s) 724
Ksp22I TGATCA 6 cut(s) 238, 466, 1522, 2050, 2253, 2365
LguI GCTCTTC 1 cut(s) 1799
LmnI GCTCC 7 cut(s) 1057, 1258, 1280, 1300, 1334, 1802, 2138
Lsp1109I GCAGC 1 cut(s) 1603
LweI GCATC 9 cut(s) 57, 88, 163, 1124, 1141, 2036, 2098, 2294, 2304
MaeI CTAG 6 cut(s) 201, 477, 555, 696, 777, 861
MaeII ACGT 1 cut(s) 1270
MaeIII GTNAC 4 cut(s) 348, 1429, 1710, 2511
MbiI CCGCTC 1 cut(s) 1797
MfeI CAATTG 4 cut(s) 18, 1580, 1962, 2018
MflI RGATCY 4 cut(s) 499, 1668, 2099, 2541
MhlI GDGCHC 8 cut(s) 29, 219, 438, 524, 554, 774, 1518, 1975
MlsI TGGCCA 1 cut(s) 900
MluNI TGGCCA 1 cut(s) 900
MlyI GAGTC 3 cut(s) 467, 1252, 1579
MmeI TCCRAC 1 cut(s) 794
Mox20I TGGCCA 1 cut(s) 900
Mph1103I ATGCAT 3 cut(s) 292, 1178, 2319
MroI TCCGGA 1 cut(s) 724
MscI TGGCCA 1 cut(s) 900
MseI TTAA 5 cut(s) 491, 1407, 1743, 2081, 2399
MslI CAYNNNNRTG 5 cut(s) 203, 240, 402, 661, 2535
Msp20I TGGCCA 1 cut(s) 900
MspCI CTTAAG 1 cut(s) 1742
MspI CCGG 6 cut(s) 725, 809, 1059, 1124, 1298, 1332
MspR9I CCNGG 3 cut(s) 810, 1059, 1060
MunI CAATTG 4 cut(s) 18, 1580, 1962, 2018
MwoI GCNNNNNNNGC 3 cut(s) 1049, 1499, 1958
NciI CCSGG 3 cut(s) 810, 1059, 1060
NcoI CCATGG 2 cut(s) 1392, 1476
NlaIV GGNNCC 6 cut(s) 773, 1282, 1302, 1670, 2058, 2416
NmuCI GTSAC 2 cut(s) 1429, 1710
NsiI ATGCAT 3 cut(s) 292, 1178, 2319
NspI RCATGY 2 cut(s) 294, 692
PagI TCATGA 3 cut(s) 241, 469, 526
PciSI GCTCTTC 1 cut(s) 1799
PfeI GAWTC 7 cut(s) 677, 820, 1325, 1376, 1619, 1847, 1892
PkrI GCNGC 5 cut(s) 382, 643, 1593, 1796, 2215
PleI GAGTC 3 cut(s) 467, 1251, 1578
PpsI GAGTC 3 cut(s) 467, 1251, 1578
PpuMI RGGWCCY 1 cut(s) 2057
PsiI TTATAA 1 cut(s) 1676
Psp124BI GAGCTC 2 cut(s) 219, 554
Psp5II RGGWCCY 1 cut(s) 2057
PspEI GGTNACC 1 cut(s) 1429
PspFI CCCAGC 1 cut(s) 1439
PspN4I GGNNCC 6 cut(s) 773, 1282, 1302, 1670, 2058, 2416
PspPI GGNCC 4 cut(s) 998, 1085, 2057, 2415
PspPPI RGGWCCY 1 cut(s) 2057
PsuI RGATCY 4 cut(s) 499, 1668, 2099, 2541
RsaI GTAC 2 cut(s) 272, 2261
RsaNI GTAC 2 cut(s) 271, 2260
RseI CAYNNNNRTG 5 cut(s) 203, 240, 402, 661, 2535
SacI GAGCTC 2 cut(s) 219, 554
SalI GTCGAC 1 cut(s) 444
SapI GCTCTTC 1 cut(s) 1799
SaqAI TTAA 5 cut(s) 491, 1407, 1743, 2081, 2399
SatI GCNGC 5 cut(s) 381, 642, 1592, 1795, 2214
Sau96I GGNCC 4 cut(s) 998, 1085, 2057, 2415
SchI GAGTC 3 cut(s) 467, 1252, 1579
ScrFI CCNGG 3 cut(s) 810, 1059, 1060
SduI GDGCHC 8 cut(s) 29, 219, 438, 524, 554, 774, 1518, 1975
SfaNI GCATC 9 cut(s) 57, 88, 163, 1124, 1141, 2036, 2098, 2294, 2304
SinI GGWCC 3 cut(s) 1085, 2057, 2415
SmaI CCCGGG 1 cut(s) 1060
SmiMI CAYNNNNRTG 5 cut(s) 203, 240, 402, 661, 2535
SmlI CTYRAG 9 cut(s) 431, 575, 606, 1024, 1068, 1191, 1600, 1742, 2095
SmoI CTYRAG 9 cut(s) 431, 575, 606, 1024, 1068, 1191, 1600, 1742, 2095
SpeI ACTAGT 1 cut(s) 695
SsiI CCGC 5 cut(s) 70, 381, 642, 1795, 2214
SspI AATATT 1 cut(s) 1371
SspMI CTAG 6 cut(s) 201, 477, 555, 696, 777, 861
SstI GAGCTC 2 cut(s) 219, 554
StyD4I CCNGG 3 cut(s) 808, 1057, 1058
StyI CCWWGG 6 cut(s) 847, 901, 946, 1392, 1476, 2351
TaaI ACNGT 1 cut(s) 2291
TaiI ACGT 1 cut(s) 1273
TaqI TCGA 7 cut(s) 445, 452, 1596, 1874, 1909, 2206, 2410
TauI GCSGC 4 cut(s) 383, 644, 1797, 2216
TfiI GAWTC 7 cut(s) 677, 820, 1325, 1376, 1619, 1847, 1892
Tru1I TTAA 5 cut(s) 491, 1407, 1743, 2081, 2399
Tru9I TTAA 5 cut(s) 491, 1407, 1743, 2081, 2399
TscAI CASTG 1 cut(s) 2425
TseFI GTSAC 2 cut(s) 1429, 1710
TseI GCWGC 1 cut(s) 1591
Tsp45I GTSAC 2 cut(s) 1429, 1710
TspDTI ATGAA 9 cut(s) 386, 609, 645, 846, 1028, 1817, 1905, 2471, 2519
TspGWI ACGGA 3 cut(s) 173, 1631, 2211
TspMI CCCGGG 1 cut(s) 1058
TspRI CASTG 1 cut(s) 2425
Vha464I CTTAAG 1 cut(s) 1742
VpaK11BI GGWCC 3 cut(s) 1085, 2057, 2415
XapI RAATTY 5 cut(s) 757, 919, 960, 1722, 2245
XceI RCATGY 2 cut(s) 294, 692
XcmI CCANNNNNNNNNTGG 2 cut(s) 1780, 2281
XmaI CCCGGG 1 cut(s) 1058
XmiI GTMKAC 2 cut(s) 136, 445
XspI CTAG 6 cut(s) 201, 477, 555, 696, 777, 861
Zsp2I ATGCAT 3 cut(s) 292, 1178, 2319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.