Rw5G047980

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
83152054 .. 83154837
2784 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G047980.1

Sequence Viewer

Length: 2361 bp
ATGGCAATGGCTTTTACTGTATGGTTGCTTTTGCTTTCCTTACTGTTTCTCCTAGCCCAAACTAATGGTAGCATAGTAGTGGGTGCTTCTCTCTCTGCAGCAGGCAACTCCTCATGGATTTCTCCATCTGGTGAATTTGCTTTTGGATTTCAGAAACTTGAAAACAGTGATAGTTTCTTGCTTTCTGTATGGTTTGCCAAGATACCAGACAGAACCATAGTTTGGTACGCAAATGGAGATAGGCCTGCACCTAAGGGATCAATTGTGAACTTGACTTCCAGCAGTGGATTAGTGCTTATAACTCCTCAGGGTGAACAGCTATGGAAATCTGATCTAACCATTGCTGGCTTTGTTGCTCATGGGGTTATGAATGATGCCGGTAACTTTGTGCTGGAAAATGAGAAGTCAGAAAAGTTATGGGAGACGTTCACGAATCCTACTGATACCATGTTGCCTGGGCAAATATTAGAAAAAGGAGGGAGACTTTCTTCTCGACAATCAGAGAGTAACTATGCGAGAGGACGCTTTCAGATAGATTTTCAAGACGATGGGAATCTTGTGTTTAGTGCCGAAAAACCTTTTTATTCTACTGAAACTACCAAGGGGATTGTTCCAGATAGTGAAGGTAAGCATCTGGTTTTCAATGAGTCAGGCAACTTCTATATTCCGCGAGTGAATGGTAGATATTATAAGTTCACAGAGGAGGAACGCCCAGCAAGGGACTACTATCTCCGGTCAACTCTCAACTTTGATGGGGTTTTGGCTCAATATTTCCTCCCAAAGCCTTATGTTGGCAATGTAAGCTGGAAACCTCTTTGGTCAGAGCCACCTAATATTTGCCAAAAAGTTCGTTCAGGACCTGGTGTCTGTGGGGACAACAGTATCTGCACTTTGAAAGCAGATAAGAGGCCAACCTGTGAATGCCCAAGAGGATACTCTTTACTTCATCCAAACGACCCGTACGGGACCTGCAATCCAGATTTCAGACAAGACTGTGACAATGAGCTTAGTTATTCAAAAGATCTGTTTGATGTTCAGGTGCTAACAAATACTGATTGGAATACCTCTGGTTATGAGCGGTTGTATGCTTCTACTGCTGACACATGCAGTCAATCTTGCTTCCAAGATTGTTTGTGTGATGTTGCTAGTTATAGCAATGAAACCTGTTGGAAAAAGAAGTTACCTCTCAGATATGGGAGAGAAGACAGTAGTCTTAATGCAAAGACCTTCATCAAATTCAGGAAGGATAATTCAACTCCACAAGTTCCTAAGATGCCAGGTTCAGATAATAAGAAGAAGATCCGGACCACTTCGGTGCCTGTGGAATCAATTCTTCTGTTTACCTCCATCTCTCTTAATTTTATGTTTGTTGCTGCAGTTTGTTTCAGATTTTTCTTCCGTTTCCGGAAGAAACCTGCAAAGTTTACACACAGTGATTTGGAAACAAATTTGCGTTCGTTTAGTCACAAAGAGCTTGAAGAAGCTACAAATGGATTCAATGAAGAATTAGGAAAGGGTTCTTTTGGAGTTGTTTACAAAGGGATAATACAAGTTGGATCAGGTGTCGAGGTGGCAGTCAAGAAGCTCAAACGTGTGATAGAAGATGGTGACAAGGAATTCAAGACGGAACTTAACATAATTGGCAAGACACATCACAAGAATCTGGTTCACCTGGTTGGATATTGTGATGAGGGACAGCAGCGATTACTAGTGTATGAATTCTTGAGCAATGGCACGTTAGCAAGCTTCATTTTTGGTGATGAGAAACCCAGTTGGAGGCAACGAATGGAAATTGCCTATGGTGTTGCTAGAGGGCTTCTGTACTTGCATGAAGAGTGCACCACCCAAATCATCCATTGTGATATAAAGCCTCAGAACATACTTCTGGATGATCATTGCAATGCCCGGATCTCGGATTTTGGCTTGGCAAAACTTATGATGACGAATCAGAGCAAGACGCACACTACCATTAAAGGGACAAAAGGGTATGTTGCACCTGAGTGGTTTAGGAACATGGCAATCACTACCAAAGTTGATGTGTATAGCTTTGGCGTTGTACTGCTAGAGATCATTTGCTGCAGGAAAAGTGTTGATATGGAAAACAACTGTGAAGAGAAAGCAATTTTAACTGATTGGGTTTATGATTGCTACCAAGGAGGAGTATTAGAGTTGGTTCTAGATCACGAAGTCGATGCCTTGGATGGTAAAATAAAGCTGGAAGAGACTGTCAAGATTGCTCTTTGGTGTATTCAAGAAGATCCATCTCTTCGACCCACAATGGGGAAGGTTGTGCAGATGCTTGAAGGAGTAGTGGAAATACATGTTCCACCATGTCCATCCCCATATAACAGAGCAGCCTGA

Protein Analysis

786

Amino Acids

88.47

Weight (kDa)

6.05

Isoelectric Point (pI)

34.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 157 3.7e-13 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 499 - 767 4.1e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 500 - 765 2.8e-49 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 299, 690
Acc36I ACCTGC 2 cut(s) 977, 1423
AccB1I GGYRCC 1 cut(s) 1315
AccB7I CCANNNNNTGG 1 cut(s) 222
AccBSI CCGCTC 1 cut(s) 1078
AccII CGCG 1 cut(s) 670
AccIII TCCGGA 2 cut(s) 1302, 1404
AciI CCGC 2 cut(s) 668, 1078
AclWI GGATC 5 cut(s) 265, 1294, 1564, 1916, 2252
AcsI RAATTY 5 cut(s) 134, 1235, 1447, 1616, 1718
AdeI CACNNNGTG 1 cut(s) 1433
AfaI GTAC 4 cut(s) 227, 962, 1823, 2058
AfiI CCNNNNNNNGG 8 cut(s) 222, 718, 791, 1776, 1912, 1974, 2279, 2280
AflIII ACRYGT 2 cut(s) 1591, 2320
AhdI GACNNNNNGTC 1 cut(s) 863
AhlI ACTAGT 1 cut(s) 1708
AjnI CCWGG 4 cut(s) 454, 859, 1276, 1671
AjuI GAANNNNNNNTTGG 4 cut(s) 126, 158, 205, 237
AleI CACNNNNGTG 2 cut(s) 1313, 1999
AloI GAACNNNNNNTCC 2 cut(s) 260, 292
AluBI AGCT 9 cut(s) 319, 804, 1006, 1474, 1484, 1585, 1746, 2046, 2215
AluI AGCT 9 cut(s) 319, 804, 1006, 1474, 1484, 1585, 1746, 2046, 2215
Alw21I GWGCWC 1 cut(s) 1841
Alw26I GTCTC 3 cut(s) 416, 475, 2216
Alw44I GTGCAC 1 cut(s) 1837
AlwI GGATC 5 cut(s) 265, 1294, 1564, 1916, 2252
AlwNI CAGNNNCTG 2 cut(s) 860, 885
Aor13HI TCCGGA 2 cut(s) 1302, 1404
AoxI GGCC 2 cut(s) 242, 908
ApaLI GTGCAC 1 cut(s) 1837
ApeKI GCWGC 5 cut(s) 98, 1373, 1699, 2076, 2354
ApoI RAATTY 5 cut(s) 134, 1235, 1447, 1616, 1718
Asp700I GAANNNNTTC 2 cut(s) 1329, 1516
AspS9I GGNCC 3 cut(s) 857, 966, 1305
AsuC2I CCSGG 1 cut(s) 1906
AsuHPI GGTGA 5 cut(s) 143, 323, 1619, 1661, 1769
AvaII GGWCC 3 cut(s) 857, 966, 1305
AxyI CCTNAGG 2 cut(s) 252, 306
BaeGI GKGCMC 1 cut(s) 1841
BaeI ACNNNNGTAYC 2 cut(s) 865, 898
BanI GGYRCC 1 cut(s) 1315
BbsI GAAGAC 1 cut(s) 1209
Bbv12I GWGCWC 1 cut(s) 1841
BbvI GCAGC 4 cut(s) 110, 1360, 1711, 2063
BccI CCATC 8 cut(s) 133, 542, 746, 1355, 1598, 2195, 2269, 2344
BcgI CGANNNNNNTGC 2 cut(s) 2174, 2208
BciT130I CCWGG 4 cut(s) 456, 861, 1278, 1673
BciVI GTATCC 1 cut(s) 926
BclI TGATCA 1 cut(s) 1891
BcnI CCSGG 1 cut(s) 1906
BcoDI GTCTC 3 cut(s) 416, 475, 2216
BcuI ACTAGT 1 cut(s) 1708
BfaI CTAG 6 cut(s) 53, 1146, 1709, 1809, 2063, 2177
BfmI CTRYAG 3 cut(s) 96, 1374, 2077
BfuAI ACCTGC 2 cut(s) 977, 1423
BfuI GTATCC 1 cut(s) 926
BglII AGATCT 1 cut(s) 1021
BisI GCNGC 5 cut(s) 99, 1374, 1700, 2077, 2355
BlsI GCNGC 5 cut(s) 100, 1375, 1701, 2078, 2356
Bme1390I CCNGG 5 cut(s) 456, 861, 1278, 1673, 1906
Bme18I GGWCC 3 cut(s) 857, 966, 1305
BmeRI GACNNNNNGTC 1 cut(s) 863
BmgT120I GGNCC 3 cut(s) 857, 966, 1305
BmiI GGNNCC 2 cut(s) 967, 1317
BmrFI CCNGG 5 cut(s) 456, 861, 1278, 1673, 1906
BmrI ACTGGG 1 cut(s) 1764
BmsI GCATC 5 cut(s) 364, 640, 1263, 2182, 2286
BmuI ACTGGG 1 cut(s) 1764
BoxI GACNNNNGTC 1 cut(s) 1209
BpiI GAAGAC 1 cut(s) 1209
BpuEI CTTGAG 1 cut(s) 1744
BpuMI CCSGG 1 cut(s) 1906
BsaBI GATNNNNATC 1 cut(s) 552
BsaJI CCNNGG 4 cut(s) 455, 600, 2152, 2196
BsaWI WCCGGW 3 cut(s) 732, 1302, 1404
BsaXI ACNNNNNCTCC 2 cut(s) 33, 63
Bsc4I CCNNNNNNNGG 8 cut(s) 222, 718, 791, 1776, 1912, 1974, 2279, 2280
Bse118I RCCGGY 1 cut(s) 377
Bse1I ACTGG 1 cut(s) 1770
Bse21I CCTNAGG 2 cut(s) 252, 306
Bse3DI GCAATG 7 cut(s) 12, 339, 802, 1162, 1735, 1894, 1906
Bse8I GATNNNNATC 1 cut(s) 552
BseAI TCCGGA 2 cut(s) 1302, 1404
BseBI CCWGG 4 cut(s) 456, 861, 1278, 1673
BseDI CCNNGG 4 cut(s) 455, 600, 2152, 2196
BseGI GGATG 5 cut(s) 946, 1851, 1894, 2206, 2336
BseJI GATNNNNATC 1 cut(s) 552
BseLI CCNNNNNNNGG 8 cut(s) 222, 718, 791, 1776, 1912, 1974, 2279, 2280
BseMI GCAATG 7 cut(s) 12, 339, 802, 1162, 1735, 1894, 1906
BseMII CTCAG 4 cut(s) 320, 1201, 1886, 1989
BseNI ACTGG 1 cut(s) 1770
BseRI GAGGAG 4 cut(s) 100, 294, 716, 2172
BseSI GKGCMC 1 cut(s) 1841
BseXI GCAGC 4 cut(s) 110, 1360, 1711, 2063
BseYI CCCAGC 1 cut(s) 712
BsgI GTGCAG 3 cut(s) 231, 871, 2312
Bsh1236I CGCG 1 cut(s) 670
BshFI GGCC 2 cut(s) 244, 910
BshNI GGYRCC 1 cut(s) 1315
BsiHKAI GWGCWC 1 cut(s) 1841
BsiSI CCGG 5 cut(s) 378, 733, 1303, 1405, 1906
BsiWI CGTACG 1 cut(s) 960
BslFI GGGAC 5 cut(s) 734, 887, 979, 1707, 1990
BslI CCNNNNNNNGG 8 cut(s) 222, 718, 791, 1776, 1912, 1974, 2279, 2280
BsmAI GTCTC 3 cut(s) 416, 475, 2216
BsmBI CGTCTC 1 cut(s) 416
BsmFI GGGAC 5 cut(s) 734, 887, 979, 1707, 1990
BsmI GAATGC 1 cut(s) 926
BsnI GGCC 2 cut(s) 244, 910
Bsp1286I GDGCHC 1 cut(s) 1841
Bsp13I TCCGGA 2 cut(s) 1302, 1404
BspACI CCGC 2 cut(s) 668, 1078
BspANI GGCC 2 cut(s) 244, 910
BspCNI CTCAG 4 cut(s) 319, 1200, 1885, 1990
BspEI TCCGGA 2 cut(s) 1302, 1404
BspFNI CGCG 1 cut(s) 670
BspLI GGNNCC 2 cut(s) 967, 1317
BspMAI CTGCAG 3 cut(s) 100, 1378, 2081
BspMI ACCTGC 2 cut(s) 977, 1423
BspPI GGATC 5 cut(s) 265, 1294, 1564, 1916, 2252
BspT107I GGYRCC 1 cut(s) 1315
BsrBI CCGCTC 1 cut(s) 1078
BsrDI GCAATG 7 cut(s) 12, 339, 802, 1162, 1735, 1894, 1906
BsrFI RCCGGY 1 cut(s) 377
BsrI ACTGG 1 cut(s) 1770
BssAI RCCGGY 1 cut(s) 377
BssECI CCNNGG 4 cut(s) 455, 600, 2152, 2196
BssT1I CCWWGG 3 cut(s) 600, 2152, 2196
Bst2UI CCWGG 4 cut(s) 456, 861, 1278, 1673
Bst4CI ACNGT 9 cut(s) 19, 45, 167, 881, 995, 1208, 1433, 2108, 2227
Bst6I CTCTTC 4 cut(s) 1827, 2106, 2214, 2271
BstC8I GCNNGC 4 cut(s) 103, 246, 346, 1744
BstDEI CTNAG 7 cut(s) 252, 306, 1007, 1187, 1269, 1872, 1998
BstF5I GGATG 5 cut(s) 946, 1851, 1894, 2206, 2336
BstFNI CGCG 1 cut(s) 670
BstMAI GTCTC 3 cut(s) 416, 475, 2216
BstMWI GCNNNNNNNGC 2 cut(s) 801, 1094
BstNI CCWGG 4 cut(s) 456, 861, 1278, 1673
BstNSI RCATGY 2 cut(s) 1107, 2324
BstPAI GACNNNNGTC 1 cut(s) 1209
BstSCI CCNGG 5 cut(s) 454, 859, 1276, 1671, 1904
BstSFI CTRYAG 3 cut(s) 96, 1374, 2077
BstSLI GKGCMC 1 cut(s) 1841
BstUI CGCG 1 cut(s) 670
BstV1I GCAGC 4 cut(s) 110, 1360, 1711, 2063
BstV2I GAAGAC 1 cut(s) 1209
BstX2I RGATCY 4 cut(s) 1021, 1299, 1908, 2257
BstXI CCANNNNNNTGG 1 cut(s) 65
BstYI RGATCY 4 cut(s) 1021, 1299, 1908, 2257
Bsu36I CCTNAGG 2 cut(s) 252, 306
BsuI GTATCC 1 cut(s) 926
BsuRI GGCC 2 cut(s) 244, 910
BtsCI GGATG 5 cut(s) 946, 1851, 1894, 2206, 2336
BtsI GCAGTG 1 cut(s) 289
BtsIMutI CAGTG 3 cut(s) 172, 289, 1438
BveI ACCTGC 2 cut(s) 977, 1423
Cac8I GCNNGC 4 cut(s) 103, 246, 346, 1744
CaiI CAGNNNCTG 2 cut(s) 860, 885
Cfr10I RCCGGY 1 cut(s) 377
Cfr13I GGNCC 3 cut(s) 857, 966, 1305
CseI GACGC 2 cut(s) 531, 1966
CsiI ACCWGGT 2 cut(s) 859, 1671
Csp6I GTAC 4 cut(s) 226, 961, 1822, 2057
CviAII CATG 8 cut(s) 114, 359, 448, 1104, 1829, 2014, 2321, 2331
CviQI GTAC 4 cut(s) 226, 961, 1822, 2057
DdeI CTNAG 7 cut(s) 252, 306, 1007, 1187, 1269, 1872, 1998
DraIII CACNNNGTG 1 cut(s) 1433
DriI GACNNNNNGTC 1 cut(s) 863
Eam1104I CTCTTC 4 cut(s) 1827, 2106, 2214, 2271
Eam1105I GACNNNNNGTC 1 cut(s) 863
EarI CTCTTC 4 cut(s) 1827, 2106, 2214, 2271
Eco130I CCWWGG 3 cut(s) 600, 2152, 2196
Eco147I AGGCCT 1 cut(s) 244
Eco47I GGWCC 3 cut(s) 857, 966, 1305
Eco81I CCTNAGG 2 cut(s) 252, 306
EcoO109I RGGNCCY 2 cut(s) 857, 966
EcoRI GAATTC 2 cut(s) 1616, 1718
EcoRII CCWGG 4 cut(s) 454, 859, 1276, 1671
EcoT14I CCWWGG 3 cut(s) 600, 2152, 2196
ErhI CCWWGG 3 cut(s) 600, 2152, 2196
Esp3I CGTCTC 1 cut(s) 416
FaeI CATG 8 cut(s) 117, 362, 451, 1107, 1832, 2017, 2324, 2334
FaqI GGGAC 5 cut(s) 734, 887, 979, 1707, 1990
FatI CATG 8 cut(s) 113, 358, 447, 1103, 1828, 2013, 2320, 2330
FbaI TGATCA 1 cut(s) 1891
Fnu4HI GCNGC 5 cut(s) 99, 1374, 1700, 2077, 2355
FokI GGATG 5 cut(s) 933, 1838, 1901, 2213, 2323
Fsp4HI GCNGC 5 cut(s) 99, 1374, 1700, 2077, 2355
FspBI CTAG 6 cut(s) 53, 1146, 1709, 1809, 2063, 2177
GluI GCNGC 5 cut(s) 99, 1374, 1700, 2077, 2355
GsaI CCCAGC 1 cut(s) 716
HaeIII GGCC 2 cut(s) 244, 910
HapII CCGG 5 cut(s) 378, 733, 1303, 1405, 1906
HgaI GACGC 2 cut(s) 531, 1966
Hin1II CATG 8 cut(s) 117, 362, 451, 1107, 1832, 2017, 2324, 2334
HincII GTYRAC 1 cut(s) 738
HindII GTYRAC 1 cut(s) 738
HindIII AAGCTT 1 cut(s) 1744
HinfI GANTC 7 cut(s) 433, 553, 647, 1325, 1494, 1660, 1945
HpaII CCGG 5 cut(s) 378, 733, 1303, 1405, 1906
HphI GGTGA 5 cut(s) 143, 323, 1619, 1661, 1769
HpyAV CCTTC 5 cut(s) 617, 1237, 1237, 2278, 2297
HpyCH4III ACNGT 9 cut(s) 19, 45, 167, 881, 995, 1208, 1433, 2108, 2227
HpyCH4IV ACGT 3 cut(s) 425, 1591, 1736
HpyF10VI GCNNNNNNNGC 2 cut(s) 801, 1094
HpyF3I CTNAG 7 cut(s) 252, 306, 1007, 1187, 1269, 1872, 1998
HpySE526I ACGT 3 cut(s) 425, 1591, 1736
Hsp92II CATG 8 cut(s) 117, 362, 451, 1107, 1832, 2017, 2324, 2334
Kpn2I TCCGGA 2 cut(s) 1302, 1404
Ksp22I TGATCA 1 cut(s) 1891
Lsp1109I GCAGC 4 cut(s) 110, 1360, 1711, 2063
LweI GCATC 5 cut(s) 364, 640, 1263, 2182, 2286
MabI ACCWGGT 2 cut(s) 859, 1671
MaeI CTAG 6 cut(s) 53, 1146, 1709, 1809, 2063, 2177
MaeII ACGT 3 cut(s) 425, 1591, 1736
MaeIII GTNAC 6 cut(s) 380, 506, 995, 1179, 1463, 1607
MbiI CCGCTC 1 cut(s) 1078
MfeI CAATTG 1 cut(s) 261
MflI RGATCY 4 cut(s) 1021, 1299, 1908, 2257
MhlI GDGCHC 1 cut(s) 1841
MlyI GAGTC 1 cut(s) 656
MmeI TCCRAC 4 cut(s) 1148, 1534, 1657, 1754
MroI TCCGGA 2 cut(s) 1302, 1404
MroXI GAANNNNTTC 2 cut(s) 1329, 1516
MseI TTAA 5 cut(s) 1215, 1356, 1632, 1971, 2126
MslI CAYNNNNRTG 4 cut(s) 77, 1313, 1899, 1999
MspI CCGG 5 cut(s) 378, 733, 1303, 1405, 1906
MspR9I CCNGG 5 cut(s) 456, 861, 1278, 1673, 1906
MunI CAATTG 1 cut(s) 261
Mva1269I GAATGC 1 cut(s) 926
MvaI CCWGG 4 cut(s) 456, 861, 1278, 1673
MvnI CGCG 1 cut(s) 670
MwoI GCNNNNNNNGC 2 cut(s) 801, 1094
NciI CCSGG 1 cut(s) 1906
NlaIII CATG 8 cut(s) 117, 362, 451, 1107, 1832, 2017, 2324, 2334
NlaIV GGNNCC 2 cut(s) 967, 1317
NmuCI GTSAC 3 cut(s) 995, 1463, 1607
NspI RCATGY 2 cut(s) 1107, 2324
OliI CACNNNNGTG 2 cut(s) 1313, 1999
PceI AGGCCT 1 cut(s) 244
PciI ACATGT 1 cut(s) 2320
PctI GAATGC 1 cut(s) 926
PdmI GAANNNNTTC 2 cut(s) 1329, 1516
PfeI GAWTC 6 cut(s) 433, 553, 1325, 1494, 1660, 1945
Pfl23II CGTACG 1 cut(s) 960
PflMI CCANNNNNTGG 1 cut(s) 222
PkrI GCNGC 5 cut(s) 100, 1375, 1701, 2078, 2356
PleI GAGTC 1 cut(s) 655
PpsI GAGTC 1 cut(s) 655
PpuMI RGGWCCY 2 cut(s) 857, 966
PscI ACATGT 1 cut(s) 2320
PshAI GACNNNNGTC 1 cut(s) 1209
PsiI TTATAA 2 cut(s) 299, 690
Psp5II RGGWCCY 2 cut(s) 857, 966
Psp6I CCWGG 4 cut(s) 454, 859, 1276, 1671
PspFI CCCAGC 1 cut(s) 712
PspGI CCWGG 4 cut(s) 454, 859, 1276, 1671
PspLI CGTACG 1 cut(s) 960
PspN4I GGNNCC 2 cut(s) 967, 1317
PspPI GGNCC 3 cut(s) 857, 966, 1305
PspPPI RGGWCCY 2 cut(s) 857, 966
PstI CTGCAG 3 cut(s) 100, 1378, 2081
PstNI CAGNNNCTG 2 cut(s) 860, 885
PsuI RGATCY 4 cut(s) 1021, 1299, 1908, 2257
RsaI GTAC 4 cut(s) 227, 962, 1823, 2058
RsaNI GTAC 4 cut(s) 226, 961, 1822, 2057
RseI CAYNNNNRTG 4 cut(s) 77, 1313, 1899, 1999
SaqAI TTAA 5 cut(s) 1215, 1356, 1632, 1971, 2126
SatI GCNGC 5 cut(s) 99, 1374, 1700, 2077, 2355
Sau96I GGNCC 3 cut(s) 857, 966, 1305
SchI GAGTC 1 cut(s) 656
ScrFI CCNGG 5 cut(s) 456, 861, 1278, 1673, 1906
SduI GDGCHC 1 cut(s) 1841
SexAI ACCWGGT 2 cut(s) 859, 1671
SfaNI GCATC 5 cut(s) 364, 640, 1263, 2182, 2286
SfcI CTRYAG 3 cut(s) 96, 1374, 2077
SinI GGWCC 3 cut(s) 857, 966, 1305
SmiMI CAYNNNNRTG 4 cut(s) 77, 1313, 1899, 1999
SmlI CTYRAG 1 cut(s) 1723
SmoI CTYRAG 1 cut(s) 1723
SpeI ACTAGT 1 cut(s) 1708
SseBI AGGCCT 1 cut(s) 244
SsiI CCGC 2 cut(s) 668, 1078
SspI AATATT 3 cut(s) 465, 770, 835
SspMI CTAG 6 cut(s) 53, 1146, 1709, 1809, 2063, 2177
StuI AGGCCT 1 cut(s) 244
StyD4I CCNGG 5 cut(s) 454, 859, 1276, 1671, 1904
StyI CCWWGG 3 cut(s) 600, 2152, 2196
TaaI ACNGT 9 cut(s) 19, 45, 167, 881, 995, 1208, 1433, 2108, 2227
TaiI ACGT 3 cut(s) 428, 1594, 1739
TaqI TCGA 4 cut(s) 493, 1566, 2190, 2269
TatI WGTACW 2 cut(s) 1821, 2056
TfiI GAWTC 6 cut(s) 433, 553, 1325, 1494, 1660, 1945
Tru1I TTAA 5 cut(s) 1215, 1356, 1632, 1971, 2126
Tru9I TTAA 5 cut(s) 1215, 1356, 1632, 1971, 2126
TscAI CASTG 3 cut(s) 172, 289, 1438
TseFI GTSAC 3 cut(s) 995, 1463, 1607
TseI GCWGC 5 cut(s) 98, 1373, 1699, 2076, 2354
Tsp45I GTSAC 3 cut(s) 995, 1463, 1607
TspDTI ATGAA 8 cut(s) 383, 935, 1173, 1219, 1515, 1731, 1738, 1845
TspGWI ACGGA 2 cut(s) 1388, 1640
TspRI CASTG 3 cut(s) 172, 289, 1438
Van91I CCANNNNNTGG 1 cut(s) 222
VneI GTGCAC 1 cut(s) 1837
VpaK11BI GGWCC 3 cut(s) 857, 966, 1305
XapI RAATTY 5 cut(s) 134, 1235, 1447, 1616, 1718
XbaI TCTAGA 1 cut(s) 2176
XceI RCATGY 2 cut(s) 1107, 2324
XmnI GAANNNNTTC 2 cut(s) 1329, 1516
XspI CTAG 6 cut(s) 53, 1146, 1709, 1809, 2063, 2177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.