Rh5DG550300

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
84637530 .. 84645477
7948 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG550300.1

Sequence Viewer

Length: 2076 bp
ATGCAAATGGCTTTTACTGTACGGCTGCTTCTGTTTATTTCCTCATTGTTTCTGATTCCAGTAGCGGTACTTGCCCAAACTAATGGTAGAGTATCAGTGGGTGCTTCTCTCTCCGCATCTGCTAACTCCTCATGGCTTTCTCCTTCTGGTCATTTCGCCTTTGGTTTTCAACAACTTGAAAACAGTGATCTTTTCTTGCTTTCTGTATGGTATGCCAAGATTCCAGACAGAACCATAGTTTGGTATGCAAATAATGGGGTTAGTCCTGCAGTTGCAGCTAAAGGTTCACTTGTGAATTTGACTGCTGCCAGTGGACTAGTGCTTACAAGTCCTCAGGGTGCTCAGCTTTGGAAATCTGGGTCCATTTCTGGAGTTGCCTTCGGGGTCTTGAATGATACAGGCAACTTTGTTCTTGAAGATGACAATTCAGAGAGTTTATGGGAGACCTTTAATAATCCAACTCATACCATTTTACCTGGACAGGATATTGAAAAAGGAGGGAAGCTTTTGTCTCAACAATCGGAGACTAACTTTTCGAAAGGAAGATTCGAGCTACGTATGCAAGATGATGGCAATCTTGTGCTTGTCACCATAAACTTGCCAACTGAGATTGCCAACAATCCTTACTATGCGAGTGACACTACTGGTGACTCTAATTCTTCTGCTGGTACAAAGCTGGAGTTCAGTAGCTCAGGCTACATGTATATTCTGAGAGAGAATGGCGAAAAATTCACCATCAAGGAAGCAGAGACAGTCTCAACTAGGAGCTTCTATCTTAGAGCAACCCTCAACTTTGATGGGGTTTTCGCTAAATACGCTCACCCGAAAAATCCCACGGGTAATGTAAGCTGGAGTATTGTTTCGTCAGTGCCAGATAACATATGCAGTGCTACGACGGTTGAATATTCAGGTTTAGCTGTATGTGGCCTATACAGTATCTGCACTCTCCAAGATCAGAGGCCAACCTGTGAATGCCCACCAGGATACTCTTTATTGGATTCGAATGATCCGAATGGCAACTGCAAACCGGGTTTTGTACCAAGTTGTGAAGATGAGCTTAACTCCACAACTGATATATATGAAGTTCAGATGCTGAACAATACGGATTGGCCAAACTCTGATTTTTTGCAGTTTCCTTCTACTCCAGAGCGTTGCAATCAATCTTGCTTTGAAGATTGTTTGTGTGCTGTTGCTATTTACAGAATTGAAACCTGTTGGAAAAAGAAGTTACCTCTTTCAAATGGGAGAGTGGATAGCAGGCTTAATTCACAGGCCTTCATCAAAGTCAGGAAGGGTAATTCAACTCAACAAGTTCCCCAAACGCCAAATCCGGATGATAGGAAGAAGACTATAAAATCGAGGACTTTGATGCCCGTGGAGTCCATTCTTTTGGTTTCTATGCCTGCGCAAAGTAATGGTAGCCAAGCAATAGGTGCTTCTTTCTCTGTTGCAGTTAACTCTTCGTGGCTTAATAGAGCGACCTTCATCAAAGTTAGTGAGACCAACTCAACTCTTCAGGTTCCTCCAAAGCCAAGTCCAGATGATAAGAAGAAGAACAAGACCACTTCAATACTTTTGGGTACCTCTGTCTTTGTCAATTTTATTTTAATTGCTGCAGTTTGTCTCGGAGTTCTCATCTACCGGAAGAAACATGCAAGGTTAACTGGAAATGAGTTGGAAACAAATTTGGTTTGTTTTAGTTACAAGGAGCTTGAAGAAGCTACAAATGGATTCAGTGAAGAATTAGGGAGGGGTTCTTTTGGAGTTGTTTACAAAGGGATAATACATATTGGTTCTGGTCTCCAAGTAGCAGTGAAGAAGCTAAACTGTGTTATACAAGAGGGTGAGCGGGAATTCAAGACAGAGCTCAACGTAATCGGTGAGGCTCTAGATCAAGAAGCTGAGGCCTTGTATGATATACCGAAGGCCTTGGAAAATATTGTGATGATTGCTATGTGGTGCATTCAAGAAGACCCATCTCTTCGACCCACAATGAGGATGGTTGTGCAGATGCTTGAAGGAGTGGTGGACGTGCATGTTCCACCATGTCCATCCCCATACTGGAGCAAGCCTTAA

Protein Analysis

691

Amino Acids

75.67

Weight (kDa)

5.33

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 78 - 164 6e-12 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1407
Acc65I GGTACC 1 cut(s) 1580
AccB1I GGYRCC 1 cut(s) 1580
AccB7I CCANNNNNTGG 1 cut(s) 240
AccBSI CCGCTC 1 cut(s) 1849
AccIII TCCGGA 1 cut(s) 1330
AciI CCGC 3 cut(s) 65, 114, 1849
AclWI GGATC 1 cut(s) 1001
AcoI YGGCCR 1 cut(s) 1109
AcsI RAATTY 4 cut(s) 295, 728, 1684, 1853
AcuI CTGAAG 1 cut(s) 1499
AfaI GTAC 5 cut(s) 21, 69, 670, 1038, 1582
AfiI CCNNNNNNNGG 3 cut(s) 240, 1995, 2061
AflIII ACRYGT 1 cut(s) 699
AhlI ACTAGT 1 cut(s) 316
AjiI CACGTC 1 cut(s) 2032
AjnI CCWGG 2 cut(s) 475, 979
AjuI GAANNNNNNNTTGG 2 cut(s) 223, 255
Alw21I GWGCWC 2 cut(s) 343, 1869
Alw26I GTCTC 8 cut(s) 437, 516, 518, 743, 760, 1493, 1628, 1805
AlwI GGATC 1 cut(s) 1001
AlwNI CAGNNNCTG 2 cut(s) 939, 1093
Aor13HI TCCGGA 1 cut(s) 1330
AoxI GGCC 6 cut(s) 925, 959, 1109, 1272, 1905, 1926
ApeKI GCWGC 4 cut(s) 25, 275, 305, 1613
ApoI RAATTY 4 cut(s) 295, 728, 1684, 1853
ArsI GACNNNNNNTTYG 2 cut(s) 517, 549
Asp718I GGTACC 1 cut(s) 1580
AspLEI GCGC 1 cut(s) 1408
AspS9I GGNCC 1 cut(s) 360
AsuC2I CCSGG 1 cut(s) 1029
AsuHPI GGTGA 6 cut(s) 580, 659, 724, 812, 1856, 1892
AsuII TTCGAA 2 cut(s) 536, 1001
AvaII GGWCC 1 cut(s) 360
AxyI CCTNAGG 1 cut(s) 333
BaeI ACNNNNGTAYC 2 cut(s) 1572, 1605
BalI TGGCCA 1 cut(s) 1111
BanI GGYRCC 1 cut(s) 1580
BanII GRGCYC 1 cut(s) 1869
BarI GAAGNNNNNNTAC 2 cut(s) 12, 44
BbsI GAAGAC 2 cut(s) 1352, 1977
Bbv12I GWGCWC 2 cut(s) 343, 1869
BbvCI CCTCAGC 1 cut(s) 1902
BbvI GCAGC 4 cut(s) 12, 287, 292, 1600
BccI CCATC 6 cut(s) 563, 743, 791, 1984, 1993, 2059
BceAI ACGGC 1 cut(s) 38
BciT130I CCWGG 2 cut(s) 477, 981
BciVI GTATCC 1 cut(s) 977
BcnI CCSGG 1 cut(s) 1029
BcoDI GTCTC 8 cut(s) 437, 516, 518, 743, 760, 1493, 1628, 1805
BcuI ACTAGT 1 cut(s) 316
BfaI CTAG 3 cut(s) 317, 762, 1889
BfmI CTRYAG 2 cut(s) 267, 1614
BfuI GTATCC 1 cut(s) 977
BisI GCNGC 4 cut(s) 26, 276, 306, 1614
BlpI GCTNAGC 1 cut(s) 342
BlsI GCNGC 4 cut(s) 27, 277, 307, 1615
Bme1390I CCNGG 3 cut(s) 477, 981, 1029
Bme18I GGWCC 1 cut(s) 360
BmgBI CACGTC 1 cut(s) 2032
BmgT120I GGNCC 1 cut(s) 360
BmiI GGNNCC 3 cut(s) 361, 1521, 1582
BmrFI CCNGG 3 cut(s) 477, 981, 1029
BmsI GCATC 4 cut(s) 125, 1080, 1359, 2001
BpiI GAAGAC 2 cut(s) 1352, 1977
BplI GAGNNNNNCTC 8 cut(s) 740, 772, 771, 803, 1046, 1078, 1490, 1522
BpmI CTGGAG 4 cut(s) 390, 698, 871, 1128
Bpu10I CCTNAGC 2 cut(s) 691, 1902
Bpu1102I GCTNAGC 1 cut(s) 342
Bpu14I TTCGAA 2 cut(s) 536, 1001
BpuMI CCSGG 1 cut(s) 1029
BsaAI YACGTR 1 cut(s) 557
BsaBI GATNNNNATC 1 cut(s) 573
BsaI GGTCTC 3 cut(s) 437, 1493, 1805
BsaJI CCNNGG 3 cut(s) 834, 1374, 1929
BsaWI WCCGGW 2 cut(s) 1330, 1641
Bsc4I CCNNNNNNNGG 3 cut(s) 240, 1995, 2061
Bse1I ACTGG 5 cut(s) 59, 309, 649, 1669, 2066
Bse21I CCTNAGG 1 cut(s) 333
Bse8I GATNNNNATC 1 cut(s) 573
BseAI TCCGGA 1 cut(s) 1330
BseBI CCWGG 2 cut(s) 477, 981
BseDI CCNNGG 3 cut(s) 834, 1374, 1929
BseGI GGATG 3 cut(s) 1339, 2004, 2051
BseJI GATNNNNATC 1 cut(s) 573
BseLI CCNNNNNNNGG 3 cut(s) 240, 1995, 2061
BseMII CTCAG 6 cut(s) 347, 356, 597, 701, 705, 1893
BseNI ACTGG 5 cut(s) 59, 309, 649, 1669, 2066
BseRI GAGGAG 1 cut(s) 118
BseXI GCAGC 4 cut(s) 12, 287, 292, 1600
BsgI GTGCAG 2 cut(s) 925, 2027
BshFI GGCC 6 cut(s) 927, 961, 1111, 1274, 1907, 1928
BshNI GGYRCC 1 cut(s) 1580
BsiHKAI GWGCWC 2 cut(s) 343, 1869
BsiSI CCGG 3 cut(s) 1028, 1331, 1642
BslI CCNNNNNNNGG 3 cut(s) 240, 1995, 2061
BsmAI GTCTC 8 cut(s) 437, 516, 518, 743, 760, 1493, 1628, 1805
BsmI GAATGC 2 cut(s) 977, 1962
BsnI GGCC 6 cut(s) 927, 961, 1111, 1274, 1907, 1928
Bso31I GGTCTC 3 cut(s) 437, 1493, 1805
Bsp119I TTCGAA 2 cut(s) 536, 1001
Bsp1286I GDGCHC 2 cut(s) 343, 1869
Bsp13I TCCGGA 1 cut(s) 1330
Bsp143I GATC 4 cut(s) 187, 952, 1006, 1891
Bsp1720I GCTNAGC 1 cut(s) 342
BspACI CCGC 3 cut(s) 65, 114, 1849
BspANI GGCC 6 cut(s) 927, 961, 1111, 1274, 1907, 1928
BspCNI CTCAG 6 cut(s) 346, 355, 598, 702, 704, 1894
BspEI TCCGGA 1 cut(s) 1330
BspLI GGNNCC 3 cut(s) 361, 1521, 1582
BspMAI CTGCAG 2 cut(s) 271, 1618
BspPI GGATC 1 cut(s) 1001
BspT104I TTCGAA 2 cut(s) 536, 1001
BspT107I GGYRCC 1 cut(s) 1580
BspTNI GGTCTC 3 cut(s) 437, 1493, 1805
BsrBI CCGCTC 1 cut(s) 1849
BsrI ACTGG 5 cut(s) 59, 309, 649, 1669, 2066
BssECI CCNNGG 3 cut(s) 834, 1374, 1929
BssMI GATC 4 cut(s) 187, 952, 1006, 1891
BssT1I CCWWGG 1 cut(s) 1929
Bst2UI CCWGG 2 cut(s) 477, 981
Bst4CI ACNGT 6 cut(s) 19, 185, 754, 898, 935, 1829
Bst6I CTCTTC 3 cut(s) 1465, 1518, 1986
BstAPI GCANNNNNTGC 1 cut(s) 1433
BstBAI YACGTR 1 cut(s) 557
BstBI TTCGAA 2 cut(s) 536, 1001
BstC8I GCNNGC 3 cut(s) 1259, 1404, 2069
BstDEI CTNAG 7 cut(s) 333, 342, 606, 691, 710, 776, 1902
BstDSI CCRYGG 2 cut(s) 834, 1374
BstF5I GGATG 3 cut(s) 1339, 2004, 2051
BstHHI GCGC 1 cut(s) 1408
BstKTI GATC 4 cut(s) 190, 955, 1009, 1894
BstMAI GTCTC 8 cut(s) 437, 516, 518, 743, 760, 1493, 1628, 1805
BstMBI GATC 4 cut(s) 187, 952, 1006, 1891
BstMWI GCNNNNNNNGC 5 cut(s) 71, 275, 559, 815, 1433
BstNI CCWGG 2 cut(s) 477, 981
BstNSI RCATGY 3 cut(s) 703, 1655, 2039
BstSCI CCNGG 3 cut(s) 475, 979, 1027
BstSFI CTRYAG 2 cut(s) 267, 1614
BstSNI TACGTA 1 cut(s) 557
BstV1I GCAGC 4 cut(s) 12, 287, 292, 1600
BstV2I GAAGAC 2 cut(s) 1352, 1977
BstXI CCANNNNNNTGG 2 cut(s) 83, 1390
Bsu36I CCTNAGG 1 cut(s) 333
BsuI GTATCC 1 cut(s) 977
BsuRI GGCC 6 cut(s) 927, 961, 1111, 1274, 1907, 1928
BtgI CCRYGG 2 cut(s) 834, 1374
BtrI CACGTC 1 cut(s) 2032
BtsCI GGATG 3 cut(s) 1339, 2004, 2051
BtsI GCAGTG 2 cut(s) 892, 1818
BtsIMutI CAGTG 7 cut(s) 102, 190, 316, 873, 892, 1741, 1818
Cac8I GCNNGC 3 cut(s) 1259, 1404, 2069
CaiI CAGNNNCTG 2 cut(s) 939, 1093
CfoI GCGC 1 cut(s) 1408
Cfr13I GGNCC 1 cut(s) 360
Csp6I GTAC 5 cut(s) 20, 68, 669, 1037, 1581
CviAII CATG 5 cut(s) 132, 700, 1652, 2036, 2046
CviQI GTAC 5 cut(s) 20, 68, 669, 1037, 1581
DdeI CTNAG 7 cut(s) 333, 342, 606, 691, 710, 776, 1902
DpnI GATC 4 cut(s) 189, 954, 1008, 1893
DpnII GATC 4 cut(s) 187, 952, 1006, 1891
EaeI YGGCCR 1 cut(s) 1109
Eam1104I CTCTTC 3 cut(s) 1465, 1518, 1986
EarI CTCTTC 3 cut(s) 1465, 1518, 1986
Ecl136II GAGCTC 1 cut(s) 1867
Eco105I TACGTA 1 cut(s) 557
Eco130I CCWWGG 1 cut(s) 1929
Eco147I AGGCCT 3 cut(s) 1274, 1907, 1928
Eco24I GRGCYC 1 cut(s) 1869
Eco31I GGTCTC 3 cut(s) 437, 1493, 1805
Eco47I GGWCC 1 cut(s) 360
Eco53kI GAGCTC 1 cut(s) 1867
Eco57I CTGAAG 1 cut(s) 1499
Eco81I CCTNAGG 1 cut(s) 333
EcoICRI GAGCTC 1 cut(s) 1867
EcoRI GAATTC 1 cut(s) 1853
EcoRII CCWGG 2 cut(s) 475, 979
EcoT14I CCWWGG 1 cut(s) 1929
EcoT38I GRGCYC 1 cut(s) 1869
ErhI CCWWGG 1 cut(s) 1929
FaeI CATG 5 cut(s) 135, 703, 1655, 2039, 2049
FalI AAGNNNNNCTT 4 cut(s) 273, 305, 1041, 1073
FatI CATG 5 cut(s) 131, 699, 1651, 2035, 2045
FauI CCCGC 1 cut(s) 1842
FauNDI CATATG 1 cut(s) 881
Fnu4HI GCNGC 4 cut(s) 26, 276, 306, 1614
FokI GGATG 3 cut(s) 1346, 2011, 2038
FriOI GRGCYC 1 cut(s) 1869
Fsp4HI GCNGC 4 cut(s) 26, 276, 306, 1614
FspBI CTAG 3 cut(s) 317, 762, 1889
FspI TGCGCA 1 cut(s) 1407
GlaI GCGC 1 cut(s) 1407
GluI GCNGC 4 cut(s) 26, 276, 306, 1614
GsuI CTGGAG 4 cut(s) 390, 698, 871, 1128
HaeIII GGCC 6 cut(s) 927, 961, 1111, 1274, 1907, 1928
HapII CCGG 3 cut(s) 1028, 1331, 1642
HhaI GCGC 1 cut(s) 1408
Hin1II CATG 5 cut(s) 135, 703, 1655, 2039, 2049
Hin6I GCGC 1 cut(s) 1406
HinP1I GCGC 1 cut(s) 1406
HincII GTYRAC 2 cut(s) 1456, 1662
HindII GTYRAC 2 cut(s) 1456, 1662
HindIII AAGCTT 1 cut(s) 503
HinfI GANTC 7 cut(s) 55, 220, 546, 650, 998, 1379, 1731
HpaI GTTAAC 2 cut(s) 1456, 1662
HpaII CCGG 3 cut(s) 1028, 1331, 1642
HphI GGTGA 6 cut(s) 580, 659, 724, 812, 1856, 1892
Hpy166II GTNNAC 6 cut(s) 287, 314, 1456, 1662, 1771, 2029
Hpy188I TCNGA 9 cut(s) 54, 430, 523, 711, 957, 1011, 1089, 1120, 1628
Hpy8I GTNNAC 6 cut(s) 287, 314, 1456, 1662, 1771, 2029
Hpy99I CGWCG 1 cut(s) 898
HpyAV CCTTC 8 cut(s) 153, 388, 1146, 1285, 1285, 1492, 1918, 2012
HpyCH4III ACNGT 6 cut(s) 19, 185, 754, 898, 935, 1829
HpyCH4IV ACGT 3 cut(s) 556, 1872, 2031
HpyF10VI GCNNNNNNNGC 5 cut(s) 71, 275, 559, 815, 1433
HpyF3I CTNAG 7 cut(s) 333, 342, 606, 691, 710, 776, 1902
HpySE526I ACGT 3 cut(s) 556, 1872, 2031
Hsp92II CATG 5 cut(s) 135, 703, 1655, 2039, 2049
HspAI GCGC 1 cut(s) 1406
Kpn2I TCCGGA 1 cut(s) 1330
KpnI GGTACC 1 cut(s) 1584
KspAI GTTAAC 2 cut(s) 1456, 1662
Kzo9I GATC 4 cut(s) 187, 952, 1006, 1891
LmnI GCTCC 3 cut(s) 765, 1708, 2064
Lsp1109I GCAGC 4 cut(s) 12, 287, 292, 1600
LweI GCATC 4 cut(s) 125, 1080, 1359, 2001
MaeI CTAG 3 cut(s) 317, 762, 1889
MaeII ACGT 3 cut(s) 556, 1872, 2031
MaeIII GTNAC 5 cut(s) 586, 635, 647, 1227, 1700
MalI GATC 4 cut(s) 189, 954, 1008, 1893
MbiI CCGCTC 1 cut(s) 1849
MboI GATC 4 cut(s) 187, 952, 1006, 1891
MhlI GDGCHC 2 cut(s) 343, 1869
MlsI TGGCCA 1 cut(s) 1111
MluNI TGGCCA 1 cut(s) 1111
MlyI GAGTC 2 cut(s) 644, 1388
MmeI TCCRAC 3 cut(s) 482, 1196, 1656
Mox20I TGGCCA 1 cut(s) 1111
MroI TCCGGA 1 cut(s) 1330
MscI TGGCCA 1 cut(s) 1111
MseI TTAA 8 cut(s) 450, 1059, 1263, 1455, 1470, 1607, 1661, 2074
Msp20I TGGCCA 1 cut(s) 1111
MspI CCGG 3 cut(s) 1028, 1331, 1642
MspR9I CCNGG 3 cut(s) 477, 981, 1029
Mva1269I GAATGC 2 cut(s) 977, 1962
MvaI CCWGG 2 cut(s) 477, 981
MwoI GCNNNNNNNGC 5 cut(s) 71, 275, 559, 815, 1433
NciI CCSGG 1 cut(s) 1029
NdeI CATATG 1 cut(s) 881
NdeII GATC 4 cut(s) 187, 952, 1006, 1891
NlaIII CATG 5 cut(s) 135, 703, 1655, 2039, 2049
NlaIV GGNNCC 3 cut(s) 361, 1521, 1582
NmuCI GTSAC 3 cut(s) 586, 635, 647
NsbI TGCGCA 1 cut(s) 1407
NspI RCATGY 3 cut(s) 703, 1655, 2039
NspV TTCGAA 2 cut(s) 536, 1001
PceI AGGCCT 3 cut(s) 1274, 1907, 1928
PciI ACATGT 1 cut(s) 699
PcsI WCGNNNNNNNCGW 1 cut(s) 1007
PctI GAATGC 2 cut(s) 977, 1962
PfeI GAWTC 5 cut(s) 55, 220, 546, 998, 1731
PflMI CCANNNNNTGG 1 cut(s) 240
PkrI GCNGC 4 cut(s) 27, 277, 307, 1615
PleI GAGTC 2 cut(s) 644, 1387
PpsI GAGTC 2 cut(s) 644, 1387
Ppu21I YACGTR 1 cut(s) 557
PscI ACATGT 1 cut(s) 699
Psp124BI GAGCTC 1 cut(s) 1869
Psp6I CCWGG 2 cut(s) 475, 979
PspGI CCWGG 2 cut(s) 475, 979
PspN4I GGNNCC 3 cut(s) 361, 1521, 1582
PspPI GGNCC 1 cut(s) 360
PstI CTGCAG 2 cut(s) 271, 1618
PstNI CAGNNNCTG 2 cut(s) 939, 1093
RsaI GTAC 5 cut(s) 21, 69, 670, 1038, 1582
RsaNI GTAC 5 cut(s) 20, 68, 669, 1037, 1581
SacI GAGCTC 1 cut(s) 1869
SaqAI TTAA 8 cut(s) 450, 1059, 1263, 1455, 1470, 1607, 1661, 2074
SatI GCNGC 4 cut(s) 26, 276, 306, 1614
Sau3AI GATC 4 cut(s) 187, 952, 1006, 1891
Sau96I GGNCC 1 cut(s) 360
SchI GAGTC 2 cut(s) 644, 1388
ScrFI CCNGG 3 cut(s) 477, 981, 1029
SduI GDGCHC 2 cut(s) 343, 1869
SfaNI GCATC 4 cut(s) 125, 1080, 1359, 2001
SfcI CTRYAG 2 cut(s) 267, 1614
SfuI TTCGAA 2 cut(s) 536, 1001
SinI GGWCC 1 cut(s) 360
SnaBI TACGTA 1 cut(s) 557
SpeI ACTAGT 1 cut(s) 316
SseBI AGGCCT 3 cut(s) 1274, 1907, 1928
SsiI CCGC 3 cut(s) 65, 114, 1849
SspI AATATT 2 cut(s) 905, 1939
SspMI CTAG 3 cut(s) 317, 762, 1889
SstI GAGCTC 1 cut(s) 1869
StuI AGGCCT 3 cut(s) 1274, 1907, 1928
StyD4I CCNGG 3 cut(s) 475, 979, 1027
StyI CCWWGG 1 cut(s) 1929
TaaI ACNGT 6 cut(s) 19, 185, 754, 898, 935, 1829
TaiI ACGT 3 cut(s) 559, 1875, 2034
TaqI TCGA 5 cut(s) 536, 549, 1001, 1358, 1984
TfiI GAWTC 5 cut(s) 55, 220, 546, 998, 1731
Tru1I TTAA 8 cut(s) 450, 1059, 1263, 1455, 1470, 1607, 1661, 2074
Tru9I TTAA 8 cut(s) 450, 1059, 1263, 1455, 1470, 1607, 1661, 2074
TscAI CASTG 7 cut(s) 102, 190, 316, 873, 892, 1741, 1818
TseFI GTSAC 3 cut(s) 586, 635, 647
TseI GCWGC 4 cut(s) 25, 275, 305, 1613
Tsp45I GTSAC 3 cut(s) 586, 635, 647
TspDTI ATGAA 3 cut(s) 1095, 1267, 1474
TspGWI ACGGA 1 cut(s) 1118
TspRI CASTG 7 cut(s) 102, 190, 316, 873, 892, 1741, 1818
Van91I CCANNNNNTGG 1 cut(s) 240
VpaK11BI GGWCC 1 cut(s) 360
XapI RAATTY 4 cut(s) 295, 728, 1684, 1853
XbaI TCTAGA 1 cut(s) 1888
XceI RCATGY 3 cut(s) 703, 1655, 2039
XcmI CCANNNNNNNNNTGG 2 cut(s) 1996, 2058
XspI CTAG 3 cut(s) 317, 762, 1889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.