Rmu_sc0004140.1_g000048

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004140.1
Physical Location & Seq
Reverse (-)
194706 .. 196034
1329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004140.1_g000048.1.cds

Sequence Viewer

Length: 1329 bp
atggaagtggcttttactgtatggctgcttctgttgcttatttcctcattgtttctggccccaatttctgtcttttcccagactgattataaagtaccagtgggtgattccctctctgcaacttcaggttacaactcctcatggctttcttcttctggtgattttgcctttggatttcgccaacttgaaaacagtgagtatttcttgctttctatatggtttgccaagataccagacagaaccatagtttggtatgcaaatggagataggcctgcacctaagggatcaattgtgaacttgacttccagcagtggattagtgcttacaactcctcagggtgaacagctatggaaatctgatctaaccattgctggctttgttgctcatggggttatgaatgataaaggtaactttgttctggaagatgagaagtcagaaaagttatgggagacattcaagaatcctactgataccatgttgcctgggcaaatattagaaagaggagggagactttcttctcgacaatcagagactaactatgcgagaggacgctttcagatagattttcaagaagatgggaatcttgtgtttagtgccaaaaaacctttttattctactgcaactactaaggggactgttccaggtagtgaaggtaaacaactggttttcaatgagtcaggcaacttctatattctgcgagtgaatggtggaagattcactttcacagcagaggaacgcctagcaagggactactatctccggtcaactctcaactttgatggagttttggctcaatattttctcccaaagtcttttgttgacactgtaagctggaaacctctttggtcagaaccagataacatttgccagaaagttgattcaggtgcgggtgtatgtgggtacaacagtatctgcactctgaaaacagatcaaaggccaacctgtaaatgcccaagaggatactgtttgcttgatccaaatgacccgtacgggagctgcaatccaaatttcagacatggctgtgaagatgagcctagtttttcaaaagatcaatatgatattcaggtgctaccaaatactgattggcttacccccggttatgagctgttaaatgcttctactgcagacaaatgcagtcaatattgcaagcaagattgtttgtgtgatgttgctatctaccacaatgaaacctgttggaaaaagaaattacctctctcatatgggagagaagacagtagtctgaatgcaaagaccttcatcaaattcaggatggataattcaactctaccggttccaccttgtcgacccacatacaatggagcagcctga

Protein Analysis

442

Amino Acids

49.53

Weight (kDa)

5.49

Isoelectric Point (pI)

36.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 90
AccB7I CCANNNNNTGG 1 cut(s) 249
AccI GTMKAC 1 cut(s) 1303
AciI CCGC 1 cut(s) 887
AclWI GGATC 2 cut(s) 292, 968
AcsI RAATTY 2 cut(s) 1006, 1262
AcuI CTGAAG 1 cut(s) 108
AfaI GTAC 3 cut(s) 96, 902, 989
AfiI CCNNNNNNNGG 2 cut(s) 249, 745
AgeI ACCGGT 1 cut(s) 1288
AgsI TTSAA 6 cut(s) 188, 457, 569, 670, 1044, 1281
AjnI CCWGG 2 cut(s) 481, 640
AjuI GAANNNNNNNTTGG 2 cut(s) 232, 264
AloI GAACNNNNNNTCC 2 cut(s) 287, 319
AluBI AGCT 4 cut(s) 346, 831, 996, 1105
AluI AGCT 4 cut(s) 346, 831, 996, 1105
Alw26I GTCTC 3 cut(s) 443, 502, 524
AlwI GGATC 2 cut(s) 292, 968
AlwNI CAGNNNCTG 1 cut(s) 912
AoxI GGCC 3 cut(s) 57, 269, 935
ApeKI GCWGC 3 cut(s) 25, 996, 1322
ApoI RAATTY 2 cut(s) 1006, 1262
AsiGI ACCGGT 1 cut(s) 1288
AspS9I GGNCC 1 cut(s) 58
AsuC2I CCSGG 1 cut(s) 1095
AsuHPI GGTGA 3 cut(s) 116, 170, 350
AxyI CCTNAGG 2 cut(s) 279, 333
BaeI ACNNNNGTAYC 4 cut(s) 892, 892, 925, 925
BarI GAAGNNNNNNTAC 2 cut(s) 12, 44
BbsI GAAGAC 1 cut(s) 1236
BbvI GCAGC 2 cut(s) 12, 983
BccI CCATC 3 cut(s) 569, 773, 1264
BciT130I CCWGG 2 cut(s) 483, 642
BciVI GTATCC 1 cut(s) 953
BcnI CCSGG 1 cut(s) 1095
BcoDI GTCTC 3 cut(s) 443, 502, 524
BfaI CTAG 2 cut(s) 740, 1035
BfmI CTRYAG 1 cut(s) 1122
BfuI GTATCC 1 cut(s) 953
BisI GCNGC 3 cut(s) 26, 997, 1323
BlsI GCNGC 3 cut(s) 27, 998, 1324
Bme1390I CCNGG 3 cut(s) 483, 642, 1095
BmgT120I GGNCC 1 cut(s) 58
BmiI GGNNCC 2 cut(s) 60, 1293
BmrFI CCNGG 3 cut(s) 483, 642, 1095
BoxI GACNNNNGTC 1 cut(s) 1236
BpiI GAAGAC 1 cut(s) 1236
BpuMI CCSGG 1 cut(s) 1095
BsaBI GATNNNNATC 1 cut(s) 579
BsaJI CCNNGG 2 cut(s) 482, 1093
BsaWI WCCGGW 2 cut(s) 759, 1288
Bsc4I CCNNNNNNNGG 2 cut(s) 249, 745
Bse118I RCCGGY 1 cut(s) 1288
Bse1I ACTGG 2 cut(s) 98, 666
Bse21I CCTNAGG 2 cut(s) 279, 333
Bse3DI GCAATG 1 cut(s) 366
Bse8I GATNNNNATC 1 cut(s) 579
BseBI CCWGG 2 cut(s) 483, 642
BseDI CCNNGG 2 cut(s) 482, 1093
BseGI GGATG 1 cut(s) 1275
BseJI GATNNNNATC 1 cut(s) 579
BseLI CCNNNNNNNGG 2 cut(s) 249, 745
BseMI GCAATG 1 cut(s) 366
BseMII CTCAG 1 cut(s) 347
BseNI ACTGG 2 cut(s) 98, 666
BseRI GAGGAG 3 cut(s) 127, 321, 516
BseXI GCAGC 2 cut(s) 12, 983
BsgI GTGCAG 2 cut(s) 258, 898
BshFI GGCC 3 cut(s) 59, 271, 937
BshTI ACCGGT 1 cut(s) 1288
BsiSI CCGG 3 cut(s) 760, 1095, 1289
BsiWI CGTACG 1 cut(s) 987
BslFI GGGAC 2 cut(s) 646, 761
BslI CCNNNNNNNGG 2 cut(s) 249, 745
BsmAI GTCTC 3 cut(s) 443, 502, 524
BsmFI GGGAC 2 cut(s) 646, 761
BsmI GAATGC 1 cut(s) 1249
BsnI GGCC 3 cut(s) 59, 271, 937
Bsp143I GATC 5 cut(s) 284, 358, 928, 973, 1048
BspACI CCGC 1 cut(s) 887
BspANI GGCC 3 cut(s) 59, 271, 937
BspCNI CTCAG 1 cut(s) 346
BspLI GGNNCC 2 cut(s) 60, 1293
BspMAI CTGCAG 1 cut(s) 1126
BspPI GGATC 2 cut(s) 292, 968
BsrDI GCAATG 1 cut(s) 366
BsrFI RCCGGY 1 cut(s) 1288
BsrI ACTGG 2 cut(s) 98, 666
BssAI RCCGGY 1 cut(s) 1288
BssECI CCNNGG 2 cut(s) 482, 1093
BssMI GATC 5 cut(s) 284, 358, 928, 973, 1048
Bst2UI CCWGG 2 cut(s) 483, 642
Bst4CI ACNGT 7 cut(s) 19, 194, 637, 826, 908, 965, 1235
BstC8I GCNNGC 3 cut(s) 273, 373, 1148
BstDEI CTNAG 3 cut(s) 279, 333, 627
BstF5I GGATG 1 cut(s) 1275
BstKTI GATC 5 cut(s) 287, 361, 931, 976, 1051
BstMAI GTCTC 3 cut(s) 443, 502, 524
BstMBI GATC 5 cut(s) 284, 358, 928, 973, 1048
BstMWI GCNNNNNNNGC 2 cut(s) 34, 1121
BstNI CCWGG 2 cut(s) 483, 642
BstPAI GACNNNNGTC 1 cut(s) 1236
BstSCI CCNGG 3 cut(s) 481, 640, 1093
BstSFI CTRYAG 1 cut(s) 1122
BstV1I GCAGC 2 cut(s) 12, 983
BstV2I GAAGAC 1 cut(s) 1236
Bsu36I CCTNAGG 2 cut(s) 279, 333
BsuI GTATCC 1 cut(s) 953
BsuRI GGCC 3 cut(s) 59, 271, 937
BtsCI GGATG 1 cut(s) 1275
BtsI GCAGTG 1 cut(s) 316
BtsIMutI CAGTG 4 cut(s) 105, 199, 316, 822
Cac8I GCNNGC 3 cut(s) 273, 373, 1148
CaiI CAGNNNCTG 1 cut(s) 912
Cfr10I RCCGGY 1 cut(s) 1288
Cfr13I GGNCC 1 cut(s) 58
CseI GACGC 1 cut(s) 558
Csp6I GTAC 3 cut(s) 95, 901, 988
CspAI ACCGGT 1 cut(s) 1288
CviAII CATG 4 cut(s) 141, 386, 475, 1016
CviQI GTAC 3 cut(s) 95, 901, 988
DdeI CTNAG 3 cut(s) 279, 333, 627
DpnI GATC 5 cut(s) 286, 360, 930, 975, 1050
DpnII GATC 5 cut(s) 284, 358, 928, 973, 1048
Eco147I AGGCCT 1 cut(s) 271
Eco57I CTGAAG 1 cut(s) 108
Eco81I CCTNAGG 2 cut(s) 279, 333
EcoRII CCWGG 2 cut(s) 481, 640
FaeI CATG 4 cut(s) 144, 389, 478, 1019
FalI AAGNNNNNCTT 2 cut(s) 703, 735
FaqI GGGAC 2 cut(s) 646, 761
FatI CATG 4 cut(s) 140, 385, 474, 1015
FauI CCCGC 1 cut(s) 880
FauNDI CATATG 1 cut(s) 1219
FblI GTMKAC 1 cut(s) 1303
Fnu4HI GCNGC 3 cut(s) 26, 997, 1323
FokI GGATG 1 cut(s) 1282
Fsp4HI GCNGC 3 cut(s) 26, 997, 1323
FspBI CTAG 2 cut(s) 740, 1035
GluI GCNGC 3 cut(s) 26, 997, 1323
HaeIII GGCC 3 cut(s) 59, 271, 937
HapII CCGG 3 cut(s) 760, 1095, 1289
HgaI GACGC 1 cut(s) 558
Hin1II CATG 4 cut(s) 144, 389, 478, 1019
HincII GTYRAC 3 cut(s) 765, 820, 1304
HindII GTYRAC 3 cut(s) 765, 820, 1304
HinfI GANTC 6 cut(s) 107, 460, 580, 674, 714, 878
HpaII CCGG 3 cut(s) 760, 1095, 1289
HphI GGTGA 3 cut(s) 116, 170, 350
Hpy166II GTNNAC 6 cut(s) 295, 341, 656, 765, 820, 1304
Hpy188I TCNGA 8 cut(s) 358, 436, 529, 558, 850, 921, 1013, 1242
Hpy188III TCNNGA 5 cut(s) 419, 457, 519, 569, 1267
Hpy8I GTNNAC 6 cut(s) 295, 341, 656, 765, 820, 1304
HpyAV CCTTC 2 cut(s) 644, 1264
HpyCH4III ACNGT 7 cut(s) 19, 194, 637, 826, 908, 965, 1235
HpyF10VI GCNNNNNNNGC 2 cut(s) 34, 1121
HpyF3I CTNAG 3 cut(s) 279, 333, 627
Hsp92II CATG 4 cut(s) 144, 389, 478, 1019
Kzo9I GATC 5 cut(s) 284, 358, 928, 973, 1048
LmnI GCTCC 2 cut(s) 993, 1319
Lsp1109I GCAGC 2 cut(s) 12, 983
MaeI CTAG 2 cut(s) 740, 1035
MaeIII GTNAC 2 cut(s) 128, 407
MalI GATC 5 cut(s) 286, 360, 930, 975, 1050
MboI GATC 5 cut(s) 284, 358, 928, 973, 1048
MboII GAAGA 8 cut(s) 141, 144, 434, 507, 584, 723, 1037, 1241
MfeI CAATTG 1 cut(s) 288
MluCI AATT 6 cut(s) 63, 288, 1006, 1205, 1262, 1276
MlyI GAGTC 1 cut(s) 683
MmeI TCCRAC 1 cut(s) 1175
MseI TTAA 1 cut(s) 1109
MslI CAYNNNNRTG 1 cut(s) 1020
MspI CCGG 3 cut(s) 760, 1095, 1289
MspR9I CCNGG 3 cut(s) 483, 642, 1095
MunI CAATTG 1 cut(s) 288
Mva1269I GAATGC 1 cut(s) 1249
MvaI CCWGG 2 cut(s) 483, 642
MwoI GCNNNNNNNGC 2 cut(s) 34, 1121
NciI CCSGG 1 cut(s) 1095
NdeI CATATG 1 cut(s) 1219
NdeII GATC 5 cut(s) 284, 358, 928, 973, 1048
NlaIII CATG 4 cut(s) 144, 389, 478, 1019
NlaIV GGNNCC 2 cut(s) 60, 1293
PceI AGGCCT 1 cut(s) 271
PctI GAATGC 1 cut(s) 1249
PfeI GAWTC 5 cut(s) 107, 460, 580, 714, 878
Pfl23II CGTACG 1 cut(s) 987
PflMI CCANNNNNTGG 1 cut(s) 249
PinAI ACCGGT 1 cut(s) 1288
PkrI GCNGC 3 cut(s) 27, 998, 1324
PleI GAGTC 1 cut(s) 682
PpsI GAGTC 1 cut(s) 682
PshAI GACNNNNGTC 1 cut(s) 1236
PsiI TTATAA 1 cut(s) 90
Psp6I CCWGG 2 cut(s) 481, 640
PspGI CCWGG 2 cut(s) 481, 640
PspLI CGTACG 1 cut(s) 987
PspN4I GGNNCC 2 cut(s) 60, 1293
PspPI GGNCC 1 cut(s) 58
PstI CTGCAG 1 cut(s) 1126
PstNI CAGNNNCTG 1 cut(s) 912
RsaI GTAC 3 cut(s) 96, 902, 989
RsaNI GTAC 3 cut(s) 95, 901, 988
RseI CAYNNNNRTG 1 cut(s) 1020
SalI GTCGAC 1 cut(s) 1302
SaqAI TTAA 1 cut(s) 1109
SatI GCNGC 3 cut(s) 26, 997, 1323
Sau3AI GATC 5 cut(s) 284, 358, 928, 973, 1048
Sau96I GGNCC 1 cut(s) 58
SchI GAGTC 1 cut(s) 683
ScrFI CCNGG 3 cut(s) 483, 642, 1095
SfcI CTRYAG 1 cut(s) 1122
SmiMI CAYNNNNRTG 1 cut(s) 1020
Sse9I AATT 6 cut(s) 63, 288, 1006, 1205, 1262, 1276
SseBI AGGCCT 1 cut(s) 271
SsiI CCGC 1 cut(s) 887
SspI AATATT 3 cut(s) 492, 797, 1142
SspMI CTAG 2 cut(s) 740, 1035
StuI AGGCCT 1 cut(s) 271
StyD4I CCNGG 3 cut(s) 481, 640, 1093
TaaI ACNGT 7 cut(s) 19, 194, 637, 826, 908, 965, 1235
TaqI TCGA 2 cut(s) 520, 1303
TasI AATT 6 cut(s) 63, 288, 1006, 1205, 1262, 1276
TfiI GAWTC 5 cut(s) 107, 460, 580, 714, 878
Tru1I TTAA 1 cut(s) 1109
Tru9I TTAA 1 cut(s) 1109
TscAI CASTG 4 cut(s) 105, 199, 316, 829
TseI GCWGC 3 cut(s) 25, 996, 1322
TspDTI ATGAA 3 cut(s) 410, 1200, 1246
TspRI CASTG 4 cut(s) 105, 199, 316, 829
Van91I CCANNNNNTGG 1 cut(s) 249
XapI RAATTY 2 cut(s) 1006, 1262
XcmI CCANNNNNNNNNTGG 1 cut(s) 1080
XmiI GTMKAC 1 cut(s) 1303
XspI CTAG 2 cut(s) 740, 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.