Rorug05G0461600

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
63540994 .. 63545675
4682 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0461600.1

Sequence Viewer

Length: 3327 bp
ATGGCTTTGAGCAGTCCAAGATCCTCTGCATGTATTCCTTCATCACCTGCTGATCCTCAGTTGAAGCATGATGTGTTTCTCAGTTTCAGGGGAGAGGATACTCGGAAGGGGATTACATCCCAATTATATGAGGAACTGCAACACAGGAGAGGAATAAAAACATTCAAGGATGATAAAGAGCTCGAAGTAGGGGTGGCTATTTCTCCTAGTCTCCTAATGGCAATCGAAGAATCCAGGTTTGCTATCGTTATTCTGTCGCCAAACTATGCTTCTTCTCCTTGGTGTCTGGATGAACTTACAAGGATTTGTCAATGCATGGAAGGCAAGGACACAATTCTTCCACTATTTTATCATGTGGATCCATCTGATGTACGACACCAAAAGAACAGTTTTGAAGTGGCTTTCACTAAGCATGAGGAAAATTTTAGGCAACCGAAGGACAAGGTGAAGCAGTGGAGAGTTGCTTTACAGAAAGTGGCCAATGTATCCGGGTGGGATTTAAAGAATTACGGGTCTGATGGAGAACTTGTCAAAGATATTGTGGAATTTGTGTGCAGTAAAGTACAACCAATAGAATTTGAGTCTACACTGTACACAGCAGGTTTTGAACCATTTGAAGCAACAATACAAGCCATGGAAGAGGTCACGAAGGCACTGAAAAATGATGACATCACTGCCATTGGGGTTGAGGGCATGGGAGGGGTTGGCAAGACAACCATGGTGAAATATGTTGCTGCACAAGCACTGAAAAATGGGCATTTTAATCATGTGATTATGGCTGTCATATCCCAAAGCCCCGACTTGTTAAGAATTCAAGGCACATTCGCAGACCTTCTGCACTTGAGATTGCATGAGGAGACATTGATTGGAAGAGCTGGTAAATTGAGAGCTAGGATGATGAGAGCAAACAAGATCCTCATAATCTTAGATGACATGTGGGACGAAATTGATTTGTCAAGCATAGGAGTTCCAAACTACAGCGAGCTTCAAAGATGCCATTCCAAAGTCATGCTGACCACAAGAAGAAGAAATGTATGTCACGTCATGAGAATTCAAGCACAAATTACTCTAGATATCCTTTCCGAAGAAGATTCTTGGACTTTGTTTGTAAAAAATGCAGCATCATCTTTTCAGGAATCAACCATTTTCTATGATATAGCGAGAAAGGTAGCTAGGGAATGTGCTGGTCTACCAATTGCATTGATAGCAGTTTCAAAAGCCCTTGGAGATAAAGACATAGAAGAATGGAAAGAAGCAGCTCAACGCCTAGAGAGGTCCCAAACAGCCAATCTTGATGACAAGGGAGATGTATTCAAATGCATAAAGTTCAGCTATGATTACTTGAGATCTAATGATGCCAAGTCATGTTTCTTGCTTTGCTGCCTATTCCCAGAAGATGAAGATATCCAAATAACAGACTTGATGAAATATGGGATCGGGAAAGGATTGTTTACAGATGCCAACACACTAGAAGAAGCTCGAGGTAGAGCACATTCAGTGGTCAAGTACCTTAAAGCTTCTTGCTTGCTTTTGGATAGTACTGAGGATGGGTGCGTAAGGATGCATGATGTCATCCGGGATACGGCCATGTCAATTGCATTGTCTGAAGATGGCCACGGTTTTTTGGTAAAAGCTGGCTGTAAACTAAAGAATTGGCCAAGGGGTATGCATGAAGGCTACTCTGCAATCTCACTAATGGGAAACAAGATTCGCAAGCTTCCCGAGAATTTGGTATGTTCAAAACTCCAGATTTTATTACTACAGACTAATTATGATATACAAGAGATTCCAGAAAGCTTTTTCCAAAGTCCTAGTTCATTGATGGTCTTGGATTTTAGCAAAACTAGTATTTCTTTACTACCCCAATCATTGAGTCTCCTAACCAACCTCCAAGCTTTGTATTTGGATTCTTGCAAGAAAATAATTGACATATCAATACTTGGAAACCTGAAGAAGCTTGAGATTCTTAGTATGAGAAAATTTCCTCTTATGGAATTGCCAGAAGAAATAGGGCATTTGGCTAATCTTAGGATGTTGGACGTCACTGGTGGATGTGTTGATACGATTCCATCTGGGGTGTTATCAAAGTTGTATAAATTAGAAGAACTATACATGCAATGTGATTTTGGGCATTGGTGGAGTGAAGTTGAGGGACCAGAAGAAAATAATATTTGCTTTGTTCAGTTAACCAGCTTGGAATATTTAATTATCTTGAAGGTTAACATATCTTCTGCAGATTTCTTGCCTAAAGACATTGAAATTTATCCAAATTGGGTAAACTTTAATATAGGTATCTGCAGAAAATCATTGGCCATACAATACCATTGGGTTAATTTGTTTTTAGATGATGATTCAAGAACGTTGACTCTTGACACAACAATCACTACGTTACCAGATTGGTTTATCAAGGTCGTAACAGCGAAAACAGAGAAACTACAGTACGTAGAGTGCAGGGGCTTATGTAACATTCTTGTGGAACATGAGCATGGCAGATTAGATTGTCTGAAGTATCTCACTCTATTTGGGCCCCATAGGAGGTTGAAAAAGTTGATGAATACAACAACATTAGTTCTTCCAAATAAATCAGTGTTCAAGAATTTGGAAGTCTTGGATATTCAAGTGGACTACCTGAAGGAATTATGTGTTGGTGAATTACCAACGGGGTCTCTACGCAATCTTAAGGTACTGAAAGTGGAGAAATGTTATAGTATGGTGAATGCAGTTGTCTCATCAAATTTGTTGAAGAGACTACAAAATCTGGAAACACTAAACTGCGGTTTCATGATTCAACTGGCATATGTATTTGATACTGAAGGGCTCGAGCCAGAGCAACTTGTGCTGACAAATTTGAGAGAATTGATATTGCGTGATCTCTGGAAATTAAGAAAAATATGGCAAGGTCCGGCTCCTCATTCAGTCTTCTGTAATCTTAATATTTTGGCATTTCGTTACTGCCATAAGCTGAAAAGTCTTTTGCCGCACCATGTAGCTCAATGTCTTTTGCAATTGGAACACCTTTGGGTAGAGGAGTGCTGTGGCCTGGACAGAGTTATTGAACCAAGTGAGCAAACTGAGAGTCAAATGGTTGTATTTCCAAGATTAAAGGACATAGTTTTGAGAAGGCTTCCACAGCTCACAAGGTTCTACAGAAGTGCTACTATCGATCATGTTGAGTGCCCTTCGTTGGAGCACTTGTATGTGGACAAATGCCCCCAGTTCTCCACCCCTGCTGCTTCTGACTTCCACAGCAGGAACCAAGTCCAAGTCAACGATAAAGAACAGTTTGTATCTCTAATGAGAAGAATGATGGACACGTATGGCTTTTGA

Protein Analysis

1108

Amino Acids

126.23

Weight (kDa)

6.08

Isoelectric Point (pI)

47.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 22 - 190 3.2e-49 TIR domain
TIR_2 PF13676 25 - 136 1.4e-14 TIR domain
NB-ARC PF00931 210 - 374 9e-30 NB-ARC domain
LRR_8 PF13855 581 - 638 3.6e-09 Leucine rich repeat
LRR_14 PF23598 622 - 747 6.8e-11 Leucine-rich repeat region
LRR_RPS2 PF23247 868 - 1011 1.5e-26 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 969 - 1073 5.3e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 55
AatII GACGTC 1 cut(s) 2043
Acc36I ACCTGC 2 cut(s) 55, 590
AccI GTMKAC 2 cut(s) 584, 1189
AciI CCGC 2 cut(s) 2775, 2978
AclI AACGTT 1 cut(s) 2360
AclWI GGATC 6 cut(s) 15, 47, 353, 366, 907, 1442
AcoI YGGCCR 5 cut(s) 477, 1584, 1612, 1655, 2310
AcuI CTGAAG 5 cut(s) 1626, 1970, 2525, 2651, 2832
AcyI GRCGYC 1 cut(s) 2040
AfaI GTAC 7 cut(s) 372, 564, 593, 1508, 1540, 2441, 2685
AfiI CCNNNNNNNGG 3 cut(s) 1582, 2535, 3184
AflII CTTAAG 1 cut(s) 2678
AflIII ACRYGT 2 cut(s) 933, 3312
AhlI ACTAGT 1 cut(s) 1844
AjiI CACGTC 1 cut(s) 1042
AjnI CCWGG 2 cut(s) 233, 3039
AjuI GAANNNNNNNTTGG 6 cut(s) 253, 285, 1352, 1384, 2628, 2660
Alw21I GWGCWC 3 cut(s) 183, 1492, 3192
Alw26I GTCTC 6 cut(s) 215, 851, 1880, 2670, 2731, 2740
AlwI GGATC 6 cut(s) 15, 47, 353, 366, 907, 1442
Ama87I CYCGRG 3 cut(s) 1479, 1721, 2819
AoxI GGCC 7 cut(s) 477, 1584, 1612, 1655, 2310, 2525, 3037
ApaI GGGCCC 1 cut(s) 2529
ApeKI GCWGC 5 cut(s) 734, 1118, 1256, 1380, 3230
ArsI GACNNNNNNTTYG 2 cut(s) 3061, 3093
AspS9I GGNCC 5 cut(s) 1275, 2153, 2525, 2526, 2900
AsuC2I CCSGG 2 cut(s) 490, 1577
AsuHPI GGTGA 5 cut(s) 36, 457, 733, 2660, 2725
AvaI CYCGRG 3 cut(s) 1479, 1721, 2819
AvaII GGWCC 3 cut(s) 1275, 2153, 2900
BaeGI GKGCMC 2 cut(s) 2529, 3179
BalI TGGCCA 4 cut(s) 479, 1614, 1657, 2312
BamHI GGATCC 1 cut(s) 358
BanII GRGCYC 3 cut(s) 183, 2529, 2820
BarI GAAGNNNNNNTAC 2 cut(s) 609, 641
BbsI GAAGAC 1 cut(s) 2911
Bbv12I GWGCWC 3 cut(s) 183, 1492, 3192
BbvI GCAGC 5 cut(s) 721, 1130, 1268, 1367, 3217
BccI CCATC 7 cut(s) 370, 512, 1541, 1604, 1816, 2077, 3301
BceAI ACGGC 1 cut(s) 1599
BciT130I CCWGG 2 cut(s) 235, 3041
BciVI GTATCC 3 cut(s) 91, 496, 1573
BcnI CCSGG 2 cut(s) 490, 1577
BcoDI GTCTC 6 cut(s) 215, 851, 1880, 2670, 2731, 2740
BcuI ACTAGT 1 cut(s) 1844
BfaI CTAG 8 cut(s) 207, 891, 1070, 1173, 1268, 1469, 1812, 1845
BfmI CTRYAG 6 cut(s) 976, 1760, 2232, 2296, 2435, 3145
BfrI CTTAAG 1 cut(s) 2678
BfuAI ACCTGC 2 cut(s) 55, 590
BfuI GTATCC 3 cut(s) 91, 496, 1573
BglII AGATCT 1 cut(s) 1346
BisI GCNGC 6 cut(s) 735, 1119, 1257, 1381, 2978, 3231
BlsI GCNGC 6 cut(s) 736, 1120, 1258, 1382, 2979, 3232
BmcAI AGTACT 1 cut(s) 1540
Bme1390I CCNGG 4 cut(s) 235, 490, 1577, 3041
Bme18I GGWCC 3 cut(s) 1275, 2153, 2900
BmeT110I CYCGRG 3 cut(s) 1479, 1721, 2819
BmgBI CACGTC 1 cut(s) 1042
BmgT120I GGNCC 5 cut(s) 1275, 2153, 2525, 2526, 2900
BmiI GGNNCC 7 cut(s) 360, 1277, 2154, 2527, 2528, 2907, 3254
BmrFI CCNGG 4 cut(s) 235, 490, 1577, 3041
BmrI ACTGGG 1 cut(s) 3208
BmsI GCATC 5 cut(s) 983, 1130, 1345, 1447, 1551
BmuI ACTGGG 1 cut(s) 3208
BpiI GAAGAC 1 cut(s) 2911
BpmI CTGGAG 1 cut(s) 1730
BpuEI CTTGAG 3 cut(s) 862, 1363, 1979
BpuMI CCSGG 2 cut(s) 490, 1577
Bsa29I ATCGAT 1 cut(s) 3162
BsaAI YACGTR 2 cut(s) 2443, 3315
BsaHI GRCGYC 1 cut(s) 2040
BsaI GGTCTC 1 cut(s) 2670
BsaJI CCNNGG 6 cut(s) 278, 633, 717, 1222, 1615, 1658
BsaXI ACNNNNNCTCC 4 cut(s) 513, 543, 3179, 3209
Bsc4I CCNNNNNNNGG 3 cut(s) 1582, 2535, 3184
Bse1I ACTGG 3 cut(s) 2050, 2796, 3214
Bse3DI GCAATG 1 cut(s) 2123
BseBI CCWGG 2 cut(s) 235, 3041
BseCI ATCGAT 1 cut(s) 3162
BseDI CCNNGG 6 cut(s) 278, 633, 717, 1222, 1615, 1658
BseGI GGATG 9 cut(s) 116, 175, 295, 900, 1552, 1566, 1572, 2037, 2057
BseLI CCNNNNNNNGG 3 cut(s) 1582, 2535, 3184
BseMI GCAATG 1 cut(s) 2123
BseMII CTCAG 4 cut(s) 71, 94, 1533, 3063
BseNI ACTGG 3 cut(s) 2050, 2796, 3214
BseRI GAGGAG 3 cut(s) 869, 2898, 3041
BseSI GKGCMC 2 cut(s) 2529, 3179
BseXI GCAGC 5 cut(s) 721, 1130, 1268, 1367, 3217
BsgI GTGCAG 4 cut(s) 574, 720, 821, 2470
BshFI GGCC 7 cut(s) 479, 1586, 1614, 1657, 2312, 2527, 3039
BshVI ATCGAT 1 cut(s) 3162
BsiHKAI GWGCWC 3 cut(s) 183, 1492, 3192
BsiHKCI CYCGRG 3 cut(s) 1479, 1721, 2819
BsiSI CCGG 3 cut(s) 489, 1576, 2903
BslFI GGGAC 3 cut(s) 953, 1261, 2166
BslI CCNNNNNNNGG 3 cut(s) 1582, 2535, 3184
BsmAI GTCTC 6 cut(s) 215, 851, 1880, 2670, 2731, 2740
BsmFI GGGAC 3 cut(s) 953, 1261, 2166
BsmI GAATGC 1 cut(s) 2722
BsnI GGCC 7 cut(s) 479, 1586, 1614, 1657, 2312, 2527, 3039
Bso31I GGTCTC 1 cut(s) 2670
BsoBI CYCGRG 3 cut(s) 1479, 1721, 2819
Bsp120I GGGCCC 1 cut(s) 2525
Bsp1286I GDGCHC 6 cut(s) 183, 1492, 2529, 2820, 3179, 3192
Bsp1407I TGTACA 1 cut(s) 591
Bsp143I GATC 8 cut(s) 20, 52, 358, 912, 1346, 1434, 2869, 3163
Bsp19I CCATGG 2 cut(s) 633, 717
BspACI CCGC 2 cut(s) 2775, 2978
BspANI GGCC 7 cut(s) 479, 1586, 1614, 1657, 2312, 2527, 3039
BspCNI CTCAG 4 cut(s) 70, 93, 1534, 3064
BspDI ATCGAT 1 cut(s) 3162
BspHI TCATGA 2 cut(s) 1044, 2781
BspLI GGNNCC 7 cut(s) 360, 1277, 2154, 2527, 2528, 2907, 3254
BspMAI CTGCAG 2 cut(s) 2236, 2300
BspMI ACCTGC 2 cut(s) 55, 590
BspPI GGATC 6 cut(s) 15, 47, 353, 366, 907, 1442
BspQI GCTCTTC 1 cut(s) 865
BspTI CTTAAG 1 cut(s) 2678
BspTNI GGTCTC 1 cut(s) 2670
BsrDI GCAATG 1 cut(s) 2123
BsrGI TGTACA 1 cut(s) 591
BsrI ACTGG 3 cut(s) 2050, 2796, 3214
BssECI CCNNGG 6 cut(s) 278, 633, 717, 1222, 1615, 1658
BssMI GATC 8 cut(s) 20, 52, 358, 912, 1346, 1434, 2869, 3163
BssNI GRCGYC 1 cut(s) 2040
BssT1I CCWWGG 5 cut(s) 278, 633, 717, 1222, 1658
Bst2UI CCWGG 2 cut(s) 235, 3041
Bst4CI ACNGT 5 cut(s) 389, 591, 1619, 2439, 3282
Bst6I CTCTTC 3 cut(s) 633, 865, 2738
BstACI GRCGYC 1 cut(s) 2040
BstAFI CTTAAG 1 cut(s) 2678
BstAPI GCANNNNNTGC 1 cut(s) 2836
BstAUI TGTACA 1 cut(s) 591
BstBAI YACGTR 2 cut(s) 2443, 3315
BstC8I GCNNGC 4 cut(s) 983, 1526, 1636, 1715
BstDEI CTNAG 8 cut(s) 57, 80, 408, 925, 1542, 1967, 2027, 3072
BstDSI CCRYGG 3 cut(s) 633, 717, 1615
BstF5I GGATG 9 cut(s) 116, 175, 295, 900, 1552, 1566, 1572, 2037, 2057
BstKTI GATC 8 cut(s) 23, 55, 361, 915, 1349, 1437, 2872, 3166
BstMAI GTCTC 6 cut(s) 215, 851, 1880, 2670, 2731, 2740
BstMBI GATC 8 cut(s) 20, 52, 358, 912, 1346, 1434, 2869, 3163
BstMWI GCNNNNNNNGC 5 cut(s) 321, 740, 1205, 2836, 3130
BstNI CCWGG 2 cut(s) 235, 3041
BstNSI RCATGY 3 cut(s) 33, 937, 2116
BstSCI CCNGG 4 cut(s) 233, 488, 1575, 3039
BstSFI CTRYAG 6 cut(s) 976, 1760, 2232, 2296, 2435, 3145
BstSLI GKGCMC 2 cut(s) 2529, 3179
BstSNI TACGTA 1 cut(s) 2443
BstV1I GCAGC 5 cut(s) 721, 1130, 1268, 1367, 3217
BstV2I GAAGAC 1 cut(s) 2911
BstX2I RGATCY 4 cut(s) 20, 358, 912, 1346
BstYI RGATCY 4 cut(s) 20, 358, 912, 1346
Bsu15I ATCGAT 1 cut(s) 3162
BsuI GTATCC 3 cut(s) 91, 496, 1573
BsuRI GGCC 7 cut(s) 479, 1586, 1614, 1657, 2312, 2527, 3039
BsuTUI ATCGAT 1 cut(s) 3162
BtgI CCRYGG 3 cut(s) 633, 717, 1615
BtrI CACGTC 1 cut(s) 1042
BtsCI GGATG 9 cut(s) 116, 175, 295, 900, 1552, 1566, 1572, 2037, 2057
BtsI GCAGTG 2 cut(s) 458, 672
BtsIMutI CAGTG 8 cut(s) 458, 587, 653, 672, 743, 1503, 2043, 2592
BveI ACCTGC 2 cut(s) 55, 590
Cac8I GCNNGC 4 cut(s) 983, 1526, 1636, 1715
CciI TCATGA 2 cut(s) 1044, 2781
Cfr13I GGNCC 5 cut(s) 1275, 2153, 2525, 2526, 2900
ClaI ATCGAT 1 cut(s) 3162
Csp6I GTAC 7 cut(s) 371, 563, 592, 1507, 1539, 2440, 2684
CviQI GTAC 7 cut(s) 371, 563, 592, 1507, 1539, 2440, 2684
DdeI CTNAG 8 cut(s) 57, 80, 408, 925, 1542, 1967, 2027, 3072
DpnI GATC 8 cut(s) 22, 54, 360, 914, 1348, 1436, 2871, 3165
DpnII GATC 8 cut(s) 20, 52, 358, 912, 1346, 1434, 2869, 3163
DraI TTTAAA 1 cut(s) 501
EaeI YGGCCR 5 cut(s) 477, 1584, 1612, 1655, 2310
Eam1104I CTCTTC 3 cut(s) 633, 865, 2738
EarI CTCTTC 3 cut(s) 633, 865, 2738
Ecl136II GAGCTC 1 cut(s) 181
Eco105I TACGTA 1 cut(s) 2443
Eco130I CCWWGG 5 cut(s) 278, 633, 717, 1222, 1658
Eco24I GRGCYC 3 cut(s) 183, 2529, 2820
Eco31I GGTCTC 1 cut(s) 2670
Eco32I GATATC 2 cut(s) 1075, 1405
Eco47I GGWCC 3 cut(s) 1275, 2153, 2900
Eco53kI GAGCTC 1 cut(s) 181
Eco57I CTGAAG 5 cut(s) 1626, 1970, 2525, 2651, 2832
Eco88I CYCGRG 3 cut(s) 1479, 1721, 2819
EcoICRI GAGCTC 1 cut(s) 181
EcoO109I RGGNCCY 2 cut(s) 1275, 2526
EcoRI GAATTC 2 cut(s) 810, 1050
EcoRII CCWGG 2 cut(s) 233, 3039
EcoRV GATATC 2 cut(s) 1075, 1405
EcoT14I CCWWGG 5 cut(s) 278, 633, 717, 1222, 1658
EcoT22I ATGCAT 4 cut(s) 317, 1322, 1566, 1671
EcoT38I GRGCYC 3 cut(s) 183, 2529, 2820
ErhI CCWWGG 5 cut(s) 278, 633, 717, 1222, 1658
FaqI GGGAC 3 cut(s) 953, 1261, 2166
FauNDI CATATG 1 cut(s) 2797
FblI GTMKAC 2 cut(s) 584, 1189
Fnu4HI GCNGC 6 cut(s) 735, 1119, 1257, 1381, 2978, 3231
FokI GGATG 9 cut(s) 103, 182, 302, 907, 1559, 1559, 1573, 2044, 2064
FriOI GRGCYC 3 cut(s) 183, 2529, 2820
Fsp4HI GCNGC 6 cut(s) 735, 1119, 1257, 1381, 2978, 3231
FspBI CTAG 8 cut(s) 207, 891, 1070, 1173, 1268, 1469, 1812, 1845
GluI GCNGC 6 cut(s) 735, 1119, 1257, 1381, 2978, 3231
GsuI CTGGAG 1 cut(s) 1730
HaeIII GGCC 7 cut(s) 479, 1586, 1614, 1657, 2312, 2527, 3039
HapII CCGG 3 cut(s) 489, 1576, 2903
Hin1I GRCGYC 1 cut(s) 2040
HincII GTYRAC 4 cut(s) 2187, 2221, 2364, 3268
HindII GTYRAC 4 cut(s) 2187, 2221, 2364, 3268
HindIII AAGCTT 5 cut(s) 1515, 1715, 1795, 1893, 1955
HpaI GTTAAC 2 cut(s) 2187, 2221
HpaII CCGG 3 cut(s) 489, 1576, 2903
HphI GGTGA 5 cut(s) 36, 457, 733, 2660, 2725
Hpy188I TCNGA 7 cut(s) 105, 367, 517, 1084, 1606, 2505, 3238
HpyCH4III ACNGT 5 cut(s) 389, 591, 1619, 2439, 3282
HpyCH4IV ACGT 6 cut(s) 1041, 2040, 2360, 2387, 2442, 3314
HpyF10VI GCNNNNNNNGC 5 cut(s) 321, 740, 1205, 2836, 3130
HpyF3I CTNAG 8 cut(s) 57, 80, 408, 925, 1542, 1967, 2027, 3072
HpySE526I ACGT 6 cut(s) 1041, 2040, 2360, 2387, 2442, 3314
Hsp92I GRCGYC 1 cut(s) 2040
KspAI GTTAAC 2 cut(s) 2187, 2221
Kzo9I GATC 8 cut(s) 20, 52, 358, 912, 1346, 1434, 2869, 3163
LguI GCTCTTC 1 cut(s) 865
LmnI GCTCC 2 cut(s) 2911, 3187
Lsp1109I GCAGC 5 cut(s) 721, 1130, 1268, 1367, 3217
LweI GCATC 5 cut(s) 983, 1130, 1345, 1447, 1551
MaeI CTAG 8 cut(s) 207, 891, 1070, 1173, 1268, 1469, 1812, 1845
MaeII ACGT 6 cut(s) 1041, 2040, 2360, 2387, 2442, 3314
MaeIII GTNAC 7 cut(s) 643, 1037, 2041, 2388, 2413, 2462, 2948
MalI GATC 8 cut(s) 22, 54, 360, 914, 1348, 1436, 2871, 3165
MboI GATC 8 cut(s) 20, 52, 358, 912, 1346, 1434, 2869, 3163
MfeI CAATTG 3 cut(s) 1194, 1593, 3005
MflI RGATCY 4 cut(s) 20, 358, 912, 1346
MhlI GDGCHC 6 cut(s) 183, 1492, 2529, 2820, 3179, 3192
MlsI TGGCCA 4 cut(s) 479, 1614, 1657, 2312
MluNI TGGCCA 4 cut(s) 479, 1614, 1657, 2312
MlyI GAGTC 4 cut(s) 590, 1882, 2359, 3085
MmeI TCCRAC 2 cut(s) 2016, 3165
Mox20I TGGCCA 4 cut(s) 479, 1614, 1657, 2312
Mph1103I ATGCAT 4 cut(s) 317, 1322, 1566, 1671
MscI TGGCCA 4 cut(s) 479, 1614, 1657, 2312
MslI CAYNNNNRTG 3 cut(s) 2471, 2484, 3195
Msp20I TGGCCA 4 cut(s) 479, 1614, 1657, 2312
MspCI CTTAAG 1 cut(s) 2678
MspI CCGG 3 cut(s) 489, 1576, 2903
MspR9I CCNGG 4 cut(s) 235, 490, 1577, 3041
MunI CAATTG 3 cut(s) 1194, 1593, 3005
Mva1269I GAATGC 1 cut(s) 2722
MvaI CCWGG 2 cut(s) 235, 3041
MwoI GCNNNNNNNGC 5 cut(s) 321, 740, 1205, 2836, 3130
NciI CCSGG 2 cut(s) 490, 1577
NcoI CCATGG 2 cut(s) 633, 717
NdeI CATATG 1 cut(s) 2797
NdeII GATC 8 cut(s) 20, 52, 358, 912, 1346, 1434, 2869, 3163
NlaIV GGNNCC 7 cut(s) 360, 1277, 2154, 2527, 2528, 2907, 3254
NmuCI GTSAC 3 cut(s) 643, 1037, 2041
NsiI ATGCAT 4 cut(s) 317, 1322, 1566, 1671
NspI RCATGY 3 cut(s) 33, 937, 2116
PaeR7I CTCGAG 2 cut(s) 1479, 2819
PagI TCATGA 2 cut(s) 1044, 2781
PaqCI CACCTGC 1 cut(s) 55
PciI ACATGT 1 cut(s) 933
PciSI GCTCTTC 1 cut(s) 865
PctI GAATGC 1 cut(s) 2722
PfoI TCCNGGA 1 cut(s) 1575
PkrI GCNGC 6 cut(s) 736, 1120, 1258, 1382, 2979, 3232
PleI GAGTC 4 cut(s) 589, 1881, 2359, 3084
PpsI GAGTC 4 cut(s) 589, 1881, 2359, 3084
Ppu21I YACGTR 2 cut(s) 2443, 3315
PpuMI RGGWCCY 1 cut(s) 1275
PscI ACATGT 1 cut(s) 933
Psp124BI GAGCTC 1 cut(s) 183
Psp1406I AACGTT 1 cut(s) 2360
Psp5II RGGWCCY 1 cut(s) 1275
Psp6I CCWGG 2 cut(s) 233, 3039
PspGI CCWGG 2 cut(s) 233, 3039
PspN4I GGNNCC 7 cut(s) 360, 1277, 2154, 2527, 2528, 2907, 3254
PspOMI GGGCCC 1 cut(s) 2525
PspPI GGNCC 5 cut(s) 1275, 2153, 2525, 2526, 2900
PspPPI RGGWCCY 1 cut(s) 1275
PspXI VCTCGAGB 2 cut(s) 1479, 2819
PstI CTGCAG 2 cut(s) 2236, 2300
PsuI RGATCY 4 cut(s) 20, 358, 912, 1346
RsaI GTAC 7 cut(s) 372, 564, 593, 1508, 1540, 2441, 2685
RsaNI GTAC 7 cut(s) 371, 563, 592, 1507, 1539, 2440, 2684
RseI CAYNNNNRTG 3 cut(s) 2471, 2484, 3195
SacI GAGCTC 1 cut(s) 183
SapI GCTCTTC 1 cut(s) 865
SatI GCNGC 6 cut(s) 735, 1119, 1257, 1381, 2978, 3231
Sau3AI GATC 8 cut(s) 20, 52, 358, 912, 1346, 1434, 2869, 3163
Sau96I GGNCC 5 cut(s) 1275, 2153, 2525, 2526, 2900
ScaI AGTACT 1 cut(s) 1540
SchI GAGTC 4 cut(s) 590, 1882, 2359, 3085
ScrFI CCNGG 4 cut(s) 235, 490, 1577, 3041
SduI GDGCHC 6 cut(s) 183, 1492, 2529, 2820, 3179, 3192
SfaNI GCATC 5 cut(s) 983, 1130, 1345, 1447, 1551
SfcI CTRYAG 6 cut(s) 976, 1760, 2232, 2296, 2435, 3145
Sfr274I CTCGAG 2 cut(s) 1479, 2819
SinI GGWCC 3 cut(s) 1275, 2153, 2900
SlaI CTCGAG 2 cut(s) 1479, 2819
SmiMI CAYNNNNRTG 3 cut(s) 2471, 2484, 3195
SmlI CTYRAG 6 cut(s) 841, 1342, 1479, 1958, 2678, 2819
SmoI CTYRAG 6 cut(s) 841, 1342, 1479, 1958, 2678, 2819
SnaBI TACGTA 1 cut(s) 2443
SpeI ACTAGT 1 cut(s) 1844
SsiI CCGC 2 cut(s) 2775, 2978
SspI AATATT 3 cut(s) 2170, 2201, 2935
SspMI CTAG 8 cut(s) 207, 891, 1070, 1173, 1268, 1469, 1812, 1845
SstI GAGCTC 1 cut(s) 183
StyD4I CCNGG 4 cut(s) 233, 488, 1575, 3039
StyI CCWWGG 5 cut(s) 278, 633, 717, 1222, 1658
TaaI ACNGT 5 cut(s) 389, 591, 1619, 2439, 3282
TaiI ACGT 6 cut(s) 1044, 2043, 2363, 2390, 2445, 3317
TaqI TCGA 5 cut(s) 183, 225, 1480, 2820, 3162
TatI WGTACW 3 cut(s) 562, 591, 1538
TauI GCSGC 1 cut(s) 2980
TscAI CASTG 8 cut(s) 458, 594, 660, 679, 750, 1503, 2050, 2592
TseFI GTSAC 3 cut(s) 643, 1037, 2041
TseI GCWGC 5 cut(s) 734, 1118, 1256, 1380, 3230
Tsp45I GTSAC 3 cut(s) 643, 1037, 2041
TspDTI ATGAA 8 cut(s) 30, 306, 1413, 1439, 1686, 1806, 2567, 2770
TspRI CASTG 8 cut(s) 458, 594, 660, 679, 750, 1503, 2050, 2592
Vha464I CTTAAG 1 cut(s) 2678
VpaK11BI GGWCC 3 cut(s) 1275, 2153, 2900
XbaI TCTAGA 1 cut(s) 1069
XceI RCATGY 3 cut(s) 33, 937, 2116
XhoI CTCGAG 2 cut(s) 1479, 2819
XmiI GTMKAC 2 cut(s) 584, 1189
XspI CTAG 8 cut(s) 207, 891, 1070, 1173, 1268, 1469, 1812, 1845
ZraI GACGTC 1 cut(s) 2041
ZrmI AGTACT 1 cut(s) 1540
Zsp2I ATGCAT 4 cut(s) 317, 1322, 1566, 1671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.