Rorug05G0461200

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000130
Physical Location & Seq
Reverse (-)
63476905 .. 63482391
5487 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0461200.1

Sequence Viewer

Length: 1740 bp
ATGAATAAGTTCCATGAGGTGACAGCTCGATTGGAACAAACTTTAAGTGGAATTTCCTACGAAGAGCTTGATATATCAGATGAAGTGAAGGAACAGGTTGAGCTTGTGCTTGCTCAGTTTAGAAGGGCCAAAGGAAGAGTTGATTTACCCGATGTTGAGCTATATGAGGATCTCTCATACCTTTACAATAGAAATGATGCAGCAACAGATCCAGCAGTCTTTAGACGACTGGTTGAAAAGTTACAATTGGCAGGGATAGGTGAACTTACACAAGAGTCACTAGCATTGCATGAGATGGTTGCCTCTAGTGGTGGGGATCCTGGAGCAAGCATTGAGAAAATGTCAATGCTATTGAAAAAGATTAAGGATTTTGTACAAACAGAAAATCCCAACATGGATGCTCCTGCTACAGAAAAGAGTGTCGTTGCAACTTCCAGCGGACAAGCATCCACTGACAGGTATCGCAAGGCCCCAGTTATACCTGATGATTTTCGATGTCCAATATCATTGGAATTGATGAAGGATCCAGTCATTGTTTCAACGGGGCAGACATATGAACGTTCCTGTATTGAGAAGTGGCTGGAACAAGGGCATGGTACATGTCCGAAAACACAACAGACCCTCTCTAGCACCAGTCTCACACCGAACTATGTTTTACGTAGCCTTATAGCCCAGTGGTGTGAGGAAAATGGTATTGAAGTGCCAAAAAGGCCCAATCGACCCAATAAAACTGCATCTGCTTGCTCGCCCGCGGAACGTACTAAGATTGAAAATCTTCTTCACAAACTAACATCAGCAAACCCTGAAGACCAAAGGTCTGCTGCTGGTGAAATCCGCCTTCTTGCCAAGCGTAATGCAGATAATCGTGTGGCTATTGCTGAAGCTGGTGCAATCCCCCTACTTGTAGGGCTGCTTTTAACCCCTGATTCCCGCACCCAAGAGCATGCTGTGACAGCGCTTCTCAACCTTTCAATATGTGAGGATAACAAAGGAAGCATCATTTCCGGTGGAGCAGTTCCTGGTATTGTTCATGTGCTCAAGCACGGTGGCATGGAAGCACGGGAAAATGCAGCGGCAACCCTTTTCAGCCTTTCTGTTGTGGATGAAAACAAGGTTAGAATTGGTGCTTCGGGAGCCATTCCGCCACTTGTTACACTGCTGAGTGAAGGTACTCAAAGGGGGAAAAAGGATGCTGCAACAGCACTATTTAACTTGTGCATTTATCAGGGGAACAAGGGGAAAGCAGTAAGGGCTGGTGTTGTTTCAACACTAATGGAGCTGCTAACCGAAACTGGAGGGGGAATGGTGGATGAAGCACTGGCCATTCTAGCAATACTAGCTAGCCATCCTGAAGGGAAAGCAGCCATTGGAGCTGCCGAGGCAGTGCCGGTTTTGGTTGAAGTCATTGGGACTGGATCTCCCCGAAACCGAGAAAATGCAGCTGCAGTTTTGGTGCACCTTTGTTCTGGGGACCCACAACATTTAGTGGATGCTCAGGAACTAGGAGTGATGGGTTCATTATTGGATTTGGCACAAAATGGCACAGACAGAGGCAAGAGAAAGGCCGCACAGTTGCTTGAGAGAATGAATCGGTTTATTGAGCAGCAAGCTCAAGCTGAGGCTGAAGTTGAGACTGAGACTGAGGTCGAGGTTGAGGCTGTGATTGAACCTCGGCCACTGGCACAATCTGAGACCCAGCAGCCACAGCCACTGTCTGCAGTGAACGCAGATGACAGCTGA

Protein Analysis

579

Amino Acids

62.29

Weight (kDa)

5.09

Isoelectric Point (pI)

38.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB10_N PF25368 1 - 44 1.7e-17 PUB10-like, N-terminal domain
U-box PF04564 160 - 230 2.4e-22 U-box domain
ARM_PUB PF25598 256 - 536 1.2e-28 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 259 - 430 7.1e-10 ARMC5
Arm PF00514 285 - 324 7.8e-10 Armadillo/beta-catenin-like repeat
Arm PF00514 368 - 406 3.2e-07 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 752
AciI CCGC 8 cut(s) 438, 750, 752, 835, 931, 1073, 1142, 1566
AclI AACGTT 1 cut(s) 559
AclWI GGATC 7 cut(s) 177, 203, 311, 324, 518, 531, 1423
AcoI YGGCCR 2 cut(s) 1320, 1673
AcsI RAATTY 1 cut(s) 51
AcuI CTGAAG 4 cut(s) 825, 900, 1371, 1644
AfaI GTAC 4 cut(s) 375, 598, 760, 1171
AfeI AGCGCT 1 cut(s) 957
AfiI CCNNNNNNNGG 1 cut(s) 456
AflIII ACRYGT 1 cut(s) 599
AgsI TTSAA 9 cut(s) 236, 355, 540, 698, 770, 972, 1266, 1400, 1667
AhdI GACNNNNNGTC 1 cut(s) 814
AjnI CCWGG 2 cut(s) 319, 1018
Alw21I GWGCWC 2 cut(s) 1038, 1458
Alw26I GTCTC 4 cut(s) 641, 1625, 1631, 1685
Alw44I GTGCAC 1 cut(s) 1454
AlwI GGATC 7 cut(s) 177, 203, 311, 324, 518, 531, 1423
AlwNI CAGNNNCTG 2 cut(s) 1019, 1711
Aor51HI AGCGCT 1 cut(s) 957
AoxI GGCC 6 cut(s) 126, 468, 710, 1320, 1563, 1673
ApaLI GTGCAC 1 cut(s) 1454
ApoI RAATTY 1 cut(s) 51
Asp700I GAANNNNTTC 2 cut(s) 8, 774
AspLEI GCGC 1 cut(s) 958
AspS9I GGNCC 4 cut(s) 126, 469, 711, 1471
AsuHPI GGTGA 3 cut(s) 31, 272, 839
AsuNHI GCTAGC 1 cut(s) 1340
AvaII GGWCC 1 cut(s) 1471
BaeGI GKGCMC 1 cut(s) 1458
BalI TGGCCA 1 cut(s) 1322
BamHI GGATCC 2 cut(s) 316, 523
BbsI GAAGAC 1 cut(s) 813
Bbv12I GWGCWC 2 cut(s) 1038, 1458
BbvCI CCTCAGC 1 cut(s) 1617
BccI CCATC 3 cut(s) 289, 1353, 1504
BciT130I CCWGG 2 cut(s) 321, 1020
BcoDI GTCTC 4 cut(s) 641, 1625, 1631, 1685
BfaI CTAG 7 cut(s) 281, 306, 627, 1328, 1337, 1341, 1502
BfmI CTRYAG 3 cut(s) 408, 1443, 1716
BfoI RGCGCY 1 cut(s) 959
BglI GCCNNNNNGGC 1 cut(s) 709
Bme1390I CCNGG 2 cut(s) 321, 1020
Bme18I GGWCC 1 cut(s) 1471
BmeRI GACNNNNNGTC 1 cut(s) 814
BmgT120I GGNCC 4 cut(s) 126, 469, 711, 1471
BmiI GGNNCC 6 cut(s) 318, 471, 525, 1135, 1472, 1473
BmrFI CCNGG 2 cut(s) 321, 1020
BmrI ACTGGG 2 cut(s) 467, 667
BmsI GCATC 7 cut(s) 187, 388, 455, 743, 1005, 1180, 1480
BmtI GCTAGC 1 cut(s) 1344
BmuI ACTGGG 2 cut(s) 467, 667
BoxI GACNNNNGTC 1 cut(s) 1643
BpiI GAAGAC 1 cut(s) 813
BplI GAGNNNNNCTC 2 cut(s) 158, 190
BpmI CTGGAG 2 cut(s) 342, 1314
Bpu10I CCTNAGC 2 cut(s) 1494, 1617
BpuEI CTTGAG 3 cut(s) 1022, 1596, 1598
BsaAI YACGTR 1 cut(s) 659
BsaI GGTCTC 1 cut(s) 1685
BsaJI CCNNGG 3 cut(s) 750, 1377, 1670
BsaWI WCCGGW 1 cut(s) 1004
BsaXI ACNNNNNCTCC 2 cut(s) 1402, 1432
Bsc4I CCNNNNNNNGG 1 cut(s) 456
Bse118I RCCGGY 1 cut(s) 1387
Bse1I ACTGG 9 cut(s) 234, 473, 527, 633, 673, 1297, 1323, 1417, 1683
Bse3DI GCAATG 1 cut(s) 284
BseBI CCWGG 2 cut(s) 321, 1020
BseDI CCNNGG 3 cut(s) 750, 1377, 1670
BseGI GGATG 7 cut(s) 403, 446, 1108, 1195, 1315, 1345, 1495
BseLI CCNNNNNNNGG 1 cut(s) 456
BseMI GCAATG 1 cut(s) 284
BseMII CTCAG 7 cut(s) 128, 1151, 1508, 1608, 1626, 1632, 1680
BseNI ACTGG 9 cut(s) 234, 473, 527, 633, 673, 1297, 1323, 1417, 1683
BseSI GKGCMC 1 cut(s) 1458
BseYI CCCAGC 1 cut(s) 1695
Bsh1236I CGCG 1 cut(s) 752
BshFI GGCC 6 cut(s) 128, 470, 712, 1322, 1565, 1675
BsiHKAI GWGCWC 2 cut(s) 1038, 1458
BsiSI CCGG 2 cut(s) 1005, 1388
BslFI GGGAC 2 cut(s) 1423, 1484
BslI CCNNNNNNNGG 1 cut(s) 456
BsmAI GTCTC 4 cut(s) 641, 1625, 1631, 1685
BsmFI GGGAC 2 cut(s) 1423, 1484
BsnI GGCC 6 cut(s) 128, 470, 712, 1322, 1565, 1675
Bso31I GGTCTC 1 cut(s) 1685
Bsp1286I GDGCHC 2 cut(s) 1038, 1458
Bsp1407I TGTACA 1 cut(s) 373
Bsp143I GATC 5 cut(s) 169, 208, 316, 523, 1415
BspACI CCGC 8 cut(s) 438, 750, 752, 835, 931, 1073, 1142, 1566
BspANI GGCC 6 cut(s) 128, 470, 712, 1322, 1565, 1675
BspCNI CTCAG 7 cut(s) 127, 1152, 1507, 1609, 1627, 1633, 1681
BspFNI CGCG 1 cut(s) 752
BspLI GGNNCC 6 cut(s) 318, 471, 525, 1135, 1472, 1473
BspMAI CTGCAG 2 cut(s) 1447, 1720
BspOI GCTAGC 1 cut(s) 1344
BspPI GGATC 7 cut(s) 177, 203, 311, 324, 518, 531, 1423
BspQI GCTCTTC 1 cut(s) 57
BspTNI GGTCTC 1 cut(s) 1685
BsrDI GCAATG 1 cut(s) 284
BsrFI RCCGGY 1 cut(s) 1387
BsrGI TGTACA 1 cut(s) 373
BsrI ACTGG 9 cut(s) 234, 473, 527, 633, 673, 1297, 1323, 1417, 1683
BssAI RCCGGY 1 cut(s) 1387
BssECI CCNNGG 3 cut(s) 750, 1377, 1670
BssMI GATC 5 cut(s) 169, 208, 316, 523, 1415
Bst2UI CCWGG 2 cut(s) 321, 1020
Bst4CI ACNGT 3 cut(s) 1046, 1572, 1713
Bst6I CTCTTC 2 cut(s) 57, 130
BstAUI TGTACA 1 cut(s) 373
BstBAI YACGTR 1 cut(s) 659
BstC8I GCNNGC 8 cut(s) 111, 328, 742, 746, 750, 945, 1342, 1608
BstDEI CTNAG 8 cut(s) 114, 762, 1160, 1494, 1617, 1635, 1641, 1689
BstDSI CCRYGG 1 cut(s) 750
BstF5I GGATG 7 cut(s) 403, 446, 1108, 1195, 1315, 1345, 1495
BstFNI CGCG 1 cut(s) 752
BstH2I RGCGCY 1 cut(s) 959
BstHHI GCGC 1 cut(s) 958
BstKTI GATC 5 cut(s) 172, 211, 319, 526, 1418
BstMAI GTCTC 4 cut(s) 641, 1625, 1631, 1685
BstMBI GATC 5 cut(s) 169, 208, 316, 523, 1415
BstNI CCWGG 2 cut(s) 321, 1020
BstNSI RCATGY 2 cut(s) 603, 947
BstPAI GACNNNNGTC 1 cut(s) 1643
BstSCI CCNGG 2 cut(s) 319, 1018
BstSFI CTRYAG 3 cut(s) 408, 1443, 1716
BstSLI GKGCMC 1 cut(s) 1458
BstSNI TACGTA 1 cut(s) 659
BstUI CGCG 1 cut(s) 752
BstV2I GAAGAC 1 cut(s) 813
BstX2I RGATCY 5 cut(s) 169, 208, 316, 523, 1415
BstYI RGATCY 5 cut(s) 169, 208, 316, 523, 1415
BsuRI GGCC 6 cut(s) 128, 470, 712, 1322, 1565, 1675
BtgI CCRYGG 1 cut(s) 750
BtsCI GGATG 7 cut(s) 403, 446, 1108, 1195, 1315, 1345, 1495
BtsI GCAGTG 3 cut(s) 1154, 1389, 1725
BtsIMutI CAGTG 8 cut(s) 450, 680, 1154, 1316, 1389, 1676, 1709, 1725
Cac8I GCNNGC 8 cut(s) 111, 328, 742, 746, 750, 945, 1342, 1608
CaiI CAGNNNCTG 2 cut(s) 1019, 1711
CfoI GCGC 1 cut(s) 958
Cfr10I RCCGGY 1 cut(s) 1387
Cfr13I GGNCC 4 cut(s) 126, 469, 711, 1471
Cfr42I CCGCGG 1 cut(s) 753
Csp6I GTAC 4 cut(s) 374, 597, 759, 1170
CspCI CAANNNNNGTGG 2 cut(s) 1027, 1062
CviAII CATG 8 cut(s) 14, 290, 394, 593, 600, 944, 1031, 1051
CviQI GTAC 4 cut(s) 374, 597, 759, 1170
DdeI CTNAG 8 cut(s) 114, 762, 1160, 1494, 1617, 1635, 1641, 1689
DpnI GATC 5 cut(s) 171, 210, 318, 525, 1417
DpnII GATC 5 cut(s) 169, 208, 316, 523, 1415
DriI GACNNNNNGTC 1 cut(s) 814
EaeI YGGCCR 2 cut(s) 1320, 1673
Eam1104I CTCTTC 2 cut(s) 57, 130
Eam1105I GACNNNNNGTC 1 cut(s) 814
EarI CTCTTC 2 cut(s) 57, 130
EciI GGCGGA 2 cut(s) 824, 1131
Eco105I TACGTA 1 cut(s) 659
Eco31I GGTCTC 1 cut(s) 1685
Eco47I GGWCC 1 cut(s) 1471
Eco47III AGCGCT 1 cut(s) 957
Eco57I CTGAAG 4 cut(s) 825, 900, 1371, 1644
EcoO109I RGGNCCY 2 cut(s) 469, 1471
EcoRII CCWGG 2 cut(s) 319, 1018
FaeI CATG 8 cut(s) 17, 293, 397, 596, 603, 947, 1034, 1054
FaqI GGGAC 2 cut(s) 1423, 1484
FatI CATG 8 cut(s) 13, 289, 393, 592, 599, 943, 1030, 1050
FauI CCCGC 2 cut(s) 757, 938
FauNDI CATATG 1 cut(s) 553
FokI GGATG 7 cut(s) 410, 433, 1115, 1202, 1322, 1332, 1502
FspBI CTAG 7 cut(s) 281, 306, 627, 1328, 1337, 1341, 1502
GlaI GCGC 1 cut(s) 957
GsaI CCCAGC 1 cut(s) 1699
GsuI CTGGAG 2 cut(s) 342, 1314
HaeII RGCGCY 1 cut(s) 959
HaeIII GGCC 6 cut(s) 128, 470, 712, 1322, 1565, 1675
HapII CCGG 2 cut(s) 1005, 1388
HhaI GCGC 1 cut(s) 958
Hin1II CATG 8 cut(s) 17, 293, 397, 596, 603, 947, 1034, 1054
Hin6I GCGC 1 cut(s) 956
HinP1I GCGC 1 cut(s) 956
HinfI GANTC 3 cut(s) 275, 926, 1588
HpaII CCGG 2 cut(s) 1005, 1388
HphI GGTGA 3 cut(s) 31, 272, 839
Hpy166II GTNNAC 3 cut(s) 263, 1456, 1723
Hpy188I TCNGA 3 cut(s) 79, 606, 1690
Hpy188III TCNNGA 3 cut(s) 1131, 1349, 1496
Hpy8I GTNNAC 3 cut(s) 263, 1456, 1723
HpyAV CCTTC 6 cut(s) 82, 117, 514, 848, 1160, 1346
HpyCH4III ACNGT 3 cut(s) 1046, 1572, 1713
HpyCH4IV ACGT 3 cut(s) 559, 658, 757
HpyF3I CTNAG 8 cut(s) 114, 762, 1160, 1494, 1617, 1635, 1641, 1689
HpySE526I ACGT 3 cut(s) 559, 658, 757
Hsp92II CATG 8 cut(s) 17, 293, 397, 596, 603, 947, 1034, 1054
HspAI GCGC 1 cut(s) 956
KflI GGGWCCC 1 cut(s) 1471
KspI CCGCGG 1 cut(s) 753
Kzo9I GATC 5 cut(s) 169, 208, 316, 523, 1415
LguI GCTCTTC 1 cut(s) 57
LmnI GCTCC 6 cut(s) 323, 406, 1010, 1133, 1276, 1370
LweI GCATC 7 cut(s) 187, 388, 455, 743, 1005, 1180, 1480
MaeI CTAG 7 cut(s) 281, 306, 627, 1328, 1337, 1341, 1502
MaeII ACGT 3 cut(s) 559, 658, 757
MaeIII GTNAC 5 cut(s) 19, 240, 276, 949, 1150
MalI GATC 5 cut(s) 171, 210, 318, 525, 1417
MboI GATC 5 cut(s) 169, 208, 316, 523, 1415
MboII GAAGA 5 cut(s) 74, 147, 767, 770, 818
MfeI CAATTG 1 cut(s) 245
MflI RGATCY 5 cut(s) 169, 208, 316, 523, 1415
MhlI GDGCHC 2 cut(s) 1038, 1458
MlsI TGGCCA 1 cut(s) 1322
MluCI AATT 4 cut(s) 51, 245, 512, 1119
MluNI TGGCCA 1 cut(s) 1322
MlyI GAGTC 1 cut(s) 284
Mox20I TGGCCA 1 cut(s) 1322
MroXI GAANNNNTTC 2 cut(s) 8, 774
MscI TGGCCA 1 cut(s) 1322
MseI TTAA 4 cut(s) 44, 363, 917, 1209
Msp20I TGGCCA 1 cut(s) 1322
MspA1I CMGCKG 5 cut(s) 438, 752, 1073, 1442, 1737
MspI CCGG 2 cut(s) 1005, 1388
MspR9I CCNGG 2 cut(s) 321, 1020
MunI CAATTG 1 cut(s) 245
MvaI CCWGG 2 cut(s) 321, 1020
MvnI CGCG 1 cut(s) 752
NdeI CATATG 1 cut(s) 553
NdeII GATC 5 cut(s) 169, 208, 316, 523, 1415
NheI GCTAGC 1 cut(s) 1340
NlaIII CATG 8 cut(s) 17, 293, 397, 596, 603, 947, 1034, 1054
NlaIV GGNNCC 6 cut(s) 318, 471, 525, 1135, 1472, 1473
NmeAIII GCCGAG 2 cut(s) 1402, 1651
NmuCI GTSAC 3 cut(s) 19, 276, 949
NspI RCATGY 2 cut(s) 603, 947
PaeI GCATGC 1 cut(s) 947
PciI ACATGT 1 cut(s) 599
PciSI GCTCTTC 1 cut(s) 57
PdmI GAANNNNTTC 2 cut(s) 8, 774
PfeI GAWTC 2 cut(s) 926, 1588
PfoI TCCNGGA 1 cut(s) 319
PleI GAGTC 1 cut(s) 283
PpsI GAGTC 1 cut(s) 283
Ppu21I YACGTR 1 cut(s) 659
PpuMI RGGWCCY 1 cut(s) 1471
PscI ACATGT 1 cut(s) 599
PshAI GACNNNNGTC 1 cut(s) 1643
Psp1406I AACGTT 1 cut(s) 559
Psp5II RGGWCCY 1 cut(s) 1471
Psp6I CCWGG 2 cut(s) 319, 1018
PspFI CCCAGC 1 cut(s) 1695
PspGI CCWGG 2 cut(s) 319, 1018
PspN4I GGNNCC 6 cut(s) 318, 471, 525, 1135, 1472, 1473
PspPI GGNCC 4 cut(s) 126, 469, 711, 1471
PspPPI RGGWCCY 1 cut(s) 1471
PstI CTGCAG 2 cut(s) 1447, 1720
PstNI CAGNNNCTG 2 cut(s) 1019, 1711
PsuI RGATCY 5 cut(s) 169, 208, 316, 523, 1415
PvuII CAGCTG 2 cut(s) 1442, 1737
RsaI GTAC 4 cut(s) 375, 598, 760, 1171
RsaNI GTAC 4 cut(s) 374, 597, 759, 1170
SacII CCGCGG 1 cut(s) 753
SapI GCTCTTC 1 cut(s) 57
SaqAI TTAA 4 cut(s) 44, 363, 917, 1209
Sau3AI GATC 5 cut(s) 169, 208, 316, 523, 1415
Sau96I GGNCC 4 cut(s) 126, 469, 711, 1471
SchI GAGTC 1 cut(s) 284
ScrFI CCNGG 2 cut(s) 321, 1020
SduI GDGCHC 2 cut(s) 1038, 1458
SfaNI GCATC 7 cut(s) 187, 388, 455, 743, 1005, 1180, 1480
SfcI CTRYAG 3 cut(s) 408, 1443, 1716
Sfr303I CCGCGG 1 cut(s) 753
SgrBI CCGCGG 1 cut(s) 753
SinI GGWCC 1 cut(s) 1471
SmlI CTYRAG 3 cut(s) 1037, 1577, 1611
SmoI CTYRAG 3 cut(s) 1037, 1577, 1611
SnaBI TACGTA 1 cut(s) 659
SphI GCATGC 1 cut(s) 947
Sse9I AATT 4 cut(s) 51, 245, 512, 1119
SsiI CCGC 8 cut(s) 438, 750, 752, 835, 931, 1073, 1142, 1566
SspMI CTAG 7 cut(s) 281, 306, 627, 1328, 1337, 1341, 1502
StyD4I CCNGG 2 cut(s) 319, 1018
TaaI ACNGT 3 cut(s) 1046, 1572, 1713
TaiI ACGT 3 cut(s) 562, 661, 760
TaqI TCGA 4 cut(s) 28, 493, 718, 1647
TasI AATT 4 cut(s) 51, 245, 512, 1119
TatI WGTACW 1 cut(s) 373
TauI GCSGC 2 cut(s) 1076, 1568
TfiI GAWTC 2 cut(s) 926, 1588
Tru1I TTAA 4 cut(s) 44, 363, 917, 1209
Tru9I TTAA 4 cut(s) 44, 363, 917, 1209
TscAI CASTG 8 cut(s) 457, 680, 1161, 1323, 1389, 1683, 1716, 1725
TseFI GTSAC 3 cut(s) 19, 276, 949
Tsp45I GTSAC 3 cut(s) 19, 276, 949
TspDTI ATGAA 9 cut(s) 17, 96, 533, 570, 1019, 1119, 1326, 1506, 1601
TspRI CASTG 8 cut(s) 457, 680, 1161, 1323, 1389, 1683, 1716, 1725
VneI GTGCAC 1 cut(s) 1454
VpaK11BI GGWCC 1 cut(s) 1471
XapI RAATTY 1 cut(s) 51
XceI RCATGY 2 cut(s) 603, 947
XmnI GAANNNNTTC 2 cut(s) 8, 774
XspI CTAG 7 cut(s) 281, 306, 627, 1328, 1337, 1341, 1502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.