RchiOBHm_Chr5g0077581

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
83469048 .. 83470103
1056 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35215

Sequence Viewer

Length: 927 bp
ATGAAACATACTTCAAATTTGGTTCACATTGGATCAGTGCTCGTGCTACTAATAACCTATTTGGTTGTTGCTATGATCACCTACTTGGTTGTTTCTCGTATCTACTCTAGGAAAGCAAAAGTCAGTGACCTTTGCCCGGTCAATCTAAAATGTTTCACTTACGTGGAGCTCACTCAAGCTACAAATGGATTCAAGGAAGAACTAGGTCGCGGTGCTTTTGCGACAGTTTTCAAAGGAGTTTTAGCATGTGATAAAGGGAAGGTAGTTGCTGTAAAAAGATTGGACACAGTGGTTAGAGAAAATGACTGGGAATTCAAAGCTGAAGTAGGTGCAATTGGTGGAACAAATCACAGAAATTTAGTCAAACTACAAGGATTCTGCAACGAGGGGCAGCACCGAATTCTTGTGTATGAGTTCATCAGTAATGGCTCTCTAGCAAGCTTCCTCTTTGGAGAGGTGAGGCTAACCTGGTATCAAAGAAGGTTGATTGCCTTGGGAACTGCAAGAGGGCTCTTATATTTGCATGAGGAGTGCAGCAGCCAAATCATACATTGTGACATTAAGCCTCAGAACATTCTTCTAGATGAGTCTTACACAGCAAGAATTGCTGACTTAGGAGTAGCCAAGCTTTTGAAAACGGACCAAACACGAACAACTACTAGAATCAGGGGTACAAAAGGGTACGTGGCCCCAGAATGGTACAAAAGTTTGCCTGTTACAGTAAAAGCTGATGTTTACAGCTATGGTAATGATGATGATGAAGCAAAGGATGACATCAAAGCTGTGGAGAAGTACGTGATGATCGCATTCTGGTGCATTCAAGAGGATCCATCAATGAGACCAACCATGAAGACTGTCACACAGATGCTTGAAGGAGTAGTTGAAGTGTCCGTCCCACAAAACCCATCCTCATTGTATGCAATTTAA

Protein Analysis

308

Amino Acids

34.56

Weight (kDa)

8.55

Isoelectric Point (pI)

22.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 64 - 249 1.8e-34 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 65 - 249 4.3e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 210
AciI CCGC 1 cut(s) 210
AclWI GGATC 3 cut(s) 40, 821, 834
AcsI RAATTY 4 cut(s) 16, 311, 355, 399
AcuI CTGAAG 1 cut(s) 342
AfaI GTAC 4 cut(s) 673, 683, 701, 794
AfiI CCNNNNNNNGG 2 cut(s) 136, 696
AgsI TTSAA 8 cut(s) 15, 193, 232, 316, 634, 821, 872, 884
AjnI CCWGG 1 cut(s) 467
AleI CACNNNNGTG 1 cut(s) 161
AluBI AGCT 8 cut(s) 169, 179, 320, 441, 628, 728, 741, 782
AluI AGCT 8 cut(s) 169, 179, 320, 441, 628, 728, 741, 782
Alw21I GWGCWC 2 cut(s) 42, 171
Alw26I GTCTC 1 cut(s) 832
AlwI GGATC 3 cut(s) 40, 821, 834
AoxI GGCC 1 cut(s) 687
ApeKI GCWGC 3 cut(s) 391, 534, 537
ApoI RAATTY 4 cut(s) 16, 311, 355, 399
AspS9I GGNCC 2 cut(s) 640, 688
AsuC2I CCSGG 1 cut(s) 137
AsuHPI GGTGA 2 cut(s) 70, 469
AvaII GGWCC 1 cut(s) 640
BaeI ACNNNNGTAYC 2 cut(s) 691, 724
BamHI GGATCC 1 cut(s) 826
BanII GRGCYC 2 cut(s) 171, 513
BauI CACGAG 1 cut(s) 41
BbsI GAAGAC 1 cut(s) 857
Bbv12I GWGCWC 2 cut(s) 42, 171
BbvI GCAGC 3 cut(s) 403, 546, 549
BccI CCATC 2 cut(s) 838, 913
BciT130I CCWGG 1 cut(s) 469
BclI TGATCA 1 cut(s) 75
BcnI CCSGG 1 cut(s) 137
BcoDI GTCTC 1 cut(s) 832
BfaI CTAG 5 cut(s) 108, 203, 434, 581, 660
BisI GCNGC 3 cut(s) 392, 535, 538
BlsI GCNGC 3 cut(s) 393, 536, 539
Bme1390I CCNGG 2 cut(s) 137, 469
Bme18I GGWCC 1 cut(s) 640
BmgT120I GGNCC 2 cut(s) 640, 688
BmiI GGNNCC 2 cut(s) 690, 828
BmrFI CCNGG 2 cut(s) 137, 469
BmrI ACTGGG 1 cut(s) 316
BmsI GCATC 1 cut(s) 855
BmuI ACTGGG 1 cut(s) 316
BpiI GAAGAC 1 cut(s) 857
BpuEI CTTGAG 1 cut(s) 159
BpuMI CCSGG 1 cut(s) 137
BsaAI YACGTR 3 cut(s) 163, 685, 796
BsaI GGTCTC 1 cut(s) 832
BsaJI CCNNGG 1 cut(s) 492
Bsc4I CCNNNNNNNGG 2 cut(s) 136, 696
Bse1I ACTGG 1 cut(s) 311
BseBI CCWGG 1 cut(s) 469
BseDI CCNNGG 1 cut(s) 492
BseGI GGATG 2 cut(s) 775, 905
BseLI CCNNNNNNNGG 2 cut(s) 136, 696
BseMII CTCAG 1 cut(s) 581
BseNI ACTGG 1 cut(s) 311
BseRI GAGGAG 1 cut(s) 542
BseXI GCAGC 3 cut(s) 403, 546, 549
BsgI GTGCAG 1 cut(s) 553
Bsh1236I CGCG 1 cut(s) 210
BshFI GGCC 1 cut(s) 689
BsiHKAI GWGCWC 2 cut(s) 42, 171
BsiSI CCGG 1 cut(s) 137
BslFI GGGAC 1 cut(s) 878
BslI CCNNNNNNNGG 2 cut(s) 136, 696
BsmAI GTCTC 1 cut(s) 832
BsmFI GGGAC 1 cut(s) 878
BsmI GAATGC 2 cut(s) 806, 816
BsnI GGCC 1 cut(s) 689
Bso31I GGTCTC 1 cut(s) 832
Bsp1286I GDGCHC 3 cut(s) 42, 171, 513
Bsp143I GATC 4 cut(s) 32, 75, 801, 826
BspACI CCGC 1 cut(s) 210
BspANI GGCC 1 cut(s) 689
BspCNI CTCAG 1 cut(s) 580
BspFNI CGCG 1 cut(s) 210
BspLI GGNNCC 2 cut(s) 690, 828
BspPI GGATC 3 cut(s) 40, 821, 834
BspTNI GGTCTC 1 cut(s) 832
BsrI ACTGG 1 cut(s) 311
BssECI CCNNGG 1 cut(s) 492
BssMI GATC 4 cut(s) 32, 75, 801, 826
BssSI CACGAG 1 cut(s) 41
BssT1I CCWWGG 1 cut(s) 492
Bst2BI CACGAG 1 cut(s) 41
Bst2UI CCWGG 1 cut(s) 469
Bst4CI ACNGT 4 cut(s) 226, 289, 721, 856
BstAPI GCANNNNNTGC 1 cut(s) 605
BstBAI YACGTR 3 cut(s) 163, 685, 796
BstC8I GCNNGC 1 cut(s) 439
BstDEI CTNAG 2 cut(s) 567, 613
BstF5I GGATG 2 cut(s) 775, 905
BstFNI CGCG 1 cut(s) 210
BstKTI GATC 4 cut(s) 35, 78, 804, 829
BstMAI GTCTC 1 cut(s) 832
BstMBI GATC 4 cut(s) 32, 75, 801, 826
BstMWI GCNNNNNNNGC 1 cut(s) 605
BstNI CCWGG 1 cut(s) 469
BstNSI RCATGY 1 cut(s) 249
BstSCI CCNGG 2 cut(s) 135, 467
BstUI CGCG 1 cut(s) 210
BstV1I GCAGC 3 cut(s) 403, 546, 549
BstV2I GAAGAC 1 cut(s) 857
BstX2I RGATCY 1 cut(s) 826
BstYI RGATCY 1 cut(s) 826
BsuRI GGCC 1 cut(s) 689
BtsCI GGATG 2 cut(s) 775, 905
BtsIMutI CAGTG 3 cut(s) 42, 130, 294
Cac8I GCNNGC 1 cut(s) 439
Cfr13I GGNCC 2 cut(s) 640, 688
CsiI ACCWGGT 1 cut(s) 467
Csp6I GTAC 4 cut(s) 672, 682, 700, 793
CviAII CATG 3 cut(s) 246, 524, 847
CviQI GTAC 4 cut(s) 672, 682, 700, 793
DdeI CTNAG 2 cut(s) 567, 613
DpnI GATC 4 cut(s) 34, 77, 803, 828
DpnII GATC 4 cut(s) 32, 75, 801, 826
Ecl136II GAGCTC 1 cut(s) 169
Eco130I CCWWGG 1 cut(s) 492
Eco24I GRGCYC 2 cut(s) 171, 513
Eco31I GGTCTC 1 cut(s) 832
Eco47I GGWCC 1 cut(s) 640
Eco53kI GAGCTC 1 cut(s) 169
Eco57I CTGAAG 1 cut(s) 342
EcoICRI GAGCTC 1 cut(s) 169
EcoRI GAATTC 2 cut(s) 311, 399
EcoRII CCWGG 1 cut(s) 467
EcoT14I CCWWGG 1 cut(s) 492
EcoT38I GRGCYC 2 cut(s) 171, 513
ErhI CCWWGG 1 cut(s) 492
FaeI CATG 3 cut(s) 249, 527, 850
FaqI GGGAC 1 cut(s) 878
FatI CATG 3 cut(s) 245, 523, 846
FbaI TGATCA 1 cut(s) 75
Fnu4HI GCNGC 3 cut(s) 392, 535, 538
FokI GGATG 2 cut(s) 782, 892
FriOI GRGCYC 2 cut(s) 171, 513
Fsp4HI GCNGC 3 cut(s) 392, 535, 538
FspBI CTAG 5 cut(s) 108, 203, 434, 581, 660
GluI GCNGC 3 cut(s) 392, 535, 538
HaeIII GGCC 1 cut(s) 689
HapII CCGG 1 cut(s) 137
Hin1II CATG 3 cut(s) 249, 527, 850
HindIII AAGCTT 2 cut(s) 439, 626
HinfI GANTC 4 cut(s) 189, 375, 587, 663
HpaII CCGG 1 cut(s) 137
HphI GGTGA 2 cut(s) 70, 469
Hpy166II GTNNAC 2 cut(s) 25, 736
Hpy188I TCNGA 1 cut(s) 570
Hpy188III TCNNGA 2 cut(s) 581, 821
Hpy8I GTNNAC 2 cut(s) 25, 736
HpyAV CCTTC 3 cut(s) 253, 474, 866
HpyCH4III ACNGT 4 cut(s) 226, 289, 721, 856
HpyCH4IV ACGT 3 cut(s) 162, 684, 795
HpyCH4V TGCA 7 cut(s) 332, 381, 503, 523, 534, 816, 920
HpyF10VI GCNNNNNNNGC 1 cut(s) 605
HpyF3I CTNAG 2 cut(s) 567, 613
HpySE526I ACGT 3 cut(s) 162, 684, 795
Hsp92II CATG 3 cut(s) 249, 527, 850
Ksp22I TGATCA 1 cut(s) 75
Kzo9I GATC 4 cut(s) 32, 75, 801, 826
LmnI GCTCC 1 cut(s) 166
LpnPI CCDG 8 cut(s) 150, 292, 454, 481, 652, 705, 726, 796
Lsp1109I GCAGC 3 cut(s) 403, 546, 549
LweI GCATC 1 cut(s) 855
MabI ACCWGGT 1 cut(s) 467
MaeI CTAG 5 cut(s) 108, 203, 434, 581, 660
MaeII ACGT 3 cut(s) 162, 684, 795
MaeIII GTNAC 4 cut(s) 125, 554, 715, 856
MalI GATC 4 cut(s) 34, 77, 803, 828
MboI GATC 4 cut(s) 32, 75, 801, 826
MboII GAAGA 3 cut(s) 209, 569, 862
MfeI CAATTG 1 cut(s) 333
MflI RGATCY 1 cut(s) 826
MhlI GDGCHC 3 cut(s) 42, 171, 513
MluCI AATT 7 cut(s) 16, 311, 333, 355, 399, 603, 921
MlyI GAGTC 1 cut(s) 596
MnlI CCTC 9 cut(s) 379, 448, 453, 455, 500, 520, 576, 817, 919
MseI TTAA 2 cut(s) 561, 925
MslI CAYNNNNRTG 3 cut(s) 161, 811, 863
MspI CCGG 1 cut(s) 137
MspR9I CCNGG 2 cut(s) 137, 469
MunI CAATTG 1 cut(s) 333
Mva1269I GAATGC 2 cut(s) 806, 816
MvaI CCWGG 1 cut(s) 469
MvnI CGCG 1 cut(s) 210
MwoI GCNNNNNNNGC 1 cut(s) 605
NciI CCSGG 1 cut(s) 137
NdeII GATC 4 cut(s) 32, 75, 801, 826
NlaIII CATG 3 cut(s) 249, 527, 850
NlaIV GGNNCC 2 cut(s) 690, 828
NmuCI GTSAC 3 cut(s) 125, 554, 856
NspI RCATGY 1 cut(s) 249
OliI CACNNNNGTG 1 cut(s) 161
PctI GAATGC 2 cut(s) 806, 816
PfeI GAWTC 3 cut(s) 189, 375, 663
PkrI GCNGC 3 cut(s) 393, 536, 539
PleI GAGTC 1 cut(s) 595
PpsI GAGTC 1 cut(s) 595
Ppu21I YACGTR 3 cut(s) 163, 685, 796
Psp124BI GAGCTC 1 cut(s) 171
Psp6I CCWGG 1 cut(s) 467
PspGI CCWGG 1 cut(s) 467
PspN4I GGNNCC 2 cut(s) 690, 828
PspPI GGNCC 2 cut(s) 640, 688
PsuI RGATCY 1 cut(s) 826
RsaI GTAC 4 cut(s) 673, 683, 701, 794
RsaNI GTAC 4 cut(s) 672, 682, 700, 793
RseI CAYNNNNRTG 3 cut(s) 161, 811, 863
SacI GAGCTC 1 cut(s) 171
SaqAI TTAA 2 cut(s) 561, 925
SatI GCNGC 3 cut(s) 392, 535, 538
Sau3AI GATC 4 cut(s) 32, 75, 801, 826
Sau96I GGNCC 2 cut(s) 640, 688
SchI GAGTC 1 cut(s) 596
ScrFI CCNGG 2 cut(s) 137, 469
SduI GDGCHC 3 cut(s) 42, 171, 513
SexAI ACCWGGT 1 cut(s) 467
SfaNI GCATC 1 cut(s) 855
SinI GGWCC 1 cut(s) 640
SmiMI CAYNNNNRTG 3 cut(s) 161, 811, 863
SmlI CTYRAG 1 cut(s) 174
SmoI CTYRAG 1 cut(s) 174
Sse9I AATT 7 cut(s) 16, 311, 333, 355, 399, 603, 921
SsiI CCGC 1 cut(s) 210
SspMI CTAG 5 cut(s) 108, 203, 434, 581, 660
SstI GAGCTC 1 cut(s) 171
StyD4I CCNGG 2 cut(s) 135, 467
StyI CCWWGG 1 cut(s) 492
TaaI ACNGT 4 cut(s) 226, 289, 721, 856
TaiI ACGT 3 cut(s) 165, 687, 798
TasI AATT 7 cut(s) 16, 311, 333, 355, 399, 603, 921
TfiI GAWTC 3 cut(s) 189, 375, 663
Tru1I TTAA 2 cut(s) 561, 925
Tru9I TTAA 2 cut(s) 561, 925
TscAI CASTG 3 cut(s) 42, 130, 294
TseFI GTSAC 3 cut(s) 125, 554, 856
TseI GCWGC 3 cut(s) 391, 534, 537
Tsp45I GTSAC 3 cut(s) 125, 554, 856
TspDTI ATGAA 4 cut(s) 17, 406, 774, 863
TspGWI ACGGA 2 cut(s) 653, 880
TspRI CASTG 3 cut(s) 42, 130, 294
VpaK11BI GGWCC 1 cut(s) 640
XapI RAATTY 4 cut(s) 16, 311, 355, 399
XbaI TCTAGA 1 cut(s) 580
XceI RCATGY 1 cut(s) 249
XspI CTAG 5 cut(s) 108, 203, 434, 581, 660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.