RchiOBHm_Chr5g0078421

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
84294782 .. 84297239
2458 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35295

Sequence Viewer

Length: 2382 bp
ATGGCAATGCTTTTTACTCTATGGCTGCTTCTGCTTCTGCTACCAATTTATGTGCTTGCTCAAACTAATGGTAGCGTAGCAGTCGGTGCTTCTCTCTCTGCAGCAGGTAACTCCTCATGGATTTCTCCATCTGGTGACTTTGCTTTTGGATTTCGGCAACTTGAAAACAATGGACTTTTCTTGCTTTCTATATGGTTTGCCAAGATACCAGACAAAACTATAGTTTGGTACGCAAATGGGGATACGCCTGCACCTAAGGGATCGACAGTGAACTTGACTGCCAACAGTGGATTAGTCCTTACAAGTCCTCAAGGTGAGAAGCTATGGACATCCAATGACACTAACATTATTGCTGGTGTCGTTGCTCATGGGGTCATGAATGATGCCGGTAACTTTGTTCTGGAAAATGCGGAGTCAGCAAAGTTATGGGAGACGTTCAAGAATCCTAGTGATACAATGTTGCCCGGGCAAATAATGGAAAGAGGAGGGAAACTGTCTTCTCGAAATTCAGAGACTGACTATTCCGGAGGGCGCTTCCAGCTAGATTTTCAACCAGATGGGAATCTTGTGTTCACTGCTAAGAAACCTTTTCATTCAACTGCAACTACCACTGGGACTGTTCCAGGTAGTGAAGGTCTACAACTGGTTTTCAATGAGTCGGGCAAGTTCTATATTCTGCGAGTAAATCATGGACTTTTCACTTTCTCAGGGGAGGAACGTTCAGCAAGGGACTACTATCTCCGTACAACTCTCAGCTTTGATGGGGTTTTGGCTCAATATTTCCTCCCAAAGACTTCCATTGGCAATGAAAGCTGGGCTGCTCTTTGGTCAGAGCCGCCTAATATTTGCCAAAAAATTAAGATGAATTCGGGTCCTGGTATTTGTGGTTACAACAGTATCTGCACTCTCAAAGATAAGAGGCCATCCTGTGAATGCCTAACAGGATACTCTTTACTTGATCCAGCAGATGCATACGGGAACTGTTATCCAGATTCCAAACAAGGCTGTGAAGATGAGCTTAGTTATACAAAAGATCTATATGATGTCAAGGTGCGAGCAAATACTGATTGGCTTACCTCCAGTTATGTGCAGTTAAATGCTTCTACTGCTGACACATGCAGTCAATCTTGCTTGGAAGATTGTTTGTGTGCTGTTGCTGTTTACGGCAATGAAACCTGTTGGAAAAAGAAGTTTCCACTCTCATATGGGAGAGAAGACACCACCCTTAATGCAAAGACCTTCATCAAATTCAGGAATGATACTTCAGCTCTACAAGTTCCGGATGATAAGAAGAAGAGCCAGACCACTAGGGTACGTTTGTTGTCAGTTCTTCTGAGCACCTCTGTCTTTGGTAATTTTATATTAGCTGCTGCAGTTATTTTTCTGGGAATTTTTTTCACTTTCCGGAAGAAACATGTAAGGTCGTTTGCGCAAAATGATTTGGACACAAAATTGCGTTTCTTTAGTCAGAAGGAGCTTGAAGAAGCTACAAATGGATTCCATGAAGAACTAGGAAAGGGTGCTTTTGGAGTTGTTTACAAAGGGATAATAAAAATTGGTTCAGATGTCCAAGTCGCAGTTAAGAAGCTCAACAGTGTGATGCAAGACTCTGTGATACAAGAAGGTGAGAAAGAATTCAAGACAGAACTGAAAACTATTGGACAGACACATCACAAGAATCTAGTTCACCTGGTTGGATATTGTGATGAGGGACAAGAGCGATTACTAGTGTATGAATTCTTGAGCAATGGCACATTAGCAAGCTTCCTGTTTGGTGATGAGAAACCCAGTTGGAGGCAACGTATGGAAATTGCTTATGGTGTTGCGAAAGGGCTTCTGTATTTGCATGAAGAGTGTACCACCCAAATCATCCACTGTGATATAAAGCCTCAGAACATACTTCTGGATGATCATTACAATGCTCGGATCTCTGATTTTGGCTTGTCGAAACTTCTGATGATGAATCAGAGCCAGACATATACTGCCATTAGAGGAACTAAAGGTTATGTTGCACCCGAGTGGTTTAGGAACATGGCTATCACTACCAAAGTTGATGTCTATAGCTTTGGTGTTGTGCTGCTGGAGATCATTTGCTGCAGGAAAAGTGTTGATATGGATAATACCAGCGAAGAGAAAGCAATTTTAACCGACTGGGTTTATAATTGTTACCAAGACGGACTTTTAGATGTGGTTCTAAATCACCAAGTCAATGCCTTGGATGACAAGACAGAGCTGGAAAAGACTGTGATGATTGCTCTTTGGTGTATCCAAGAAGACCCATTTCTTCGACCCACGATGAGAAAGGTTGTGCAGATGCTTGAAGGAGTAGTGGAAGTACATGTTCCACCATGTCCATCCCCATATTCATCAAGAACAAGCTGA

Protein Analysis

793

Amino Acids

88.36

Weight (kDa)

5.76

Isoelectric Point (pI)

31.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 160 5.3e-14 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 500 - 773 1e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 501 - 771 9e-49 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2160
Acc16I TGCGCA 1 cut(s) 1431
Acc36I ACCTGC 1 cut(s) 95
AccI GTMKAC 1 cut(s) 637
AccIII TCCGGA 3 cut(s) 524, 1279, 1404
AciI CCGC 2 cut(s) 410, 836
AclI AACGTT 1 cut(s) 718
AclWI GGATC 3 cut(s) 268, 953, 1934
AcsI RAATTY 6 cut(s) 505, 865, 1247, 1389, 1634, 1736
AcuI CTGAAG 1 cut(s) 1248
AfaI GTAC 5 cut(s) 230, 745, 1314, 1858, 2337
AfiI CCNNNNNNNGG 1 cut(s) 1794
AflIII ACRYGT 2 cut(s) 1414, 2338
AgsI TTSAA 8 cut(s) 164, 439, 551, 597, 652, 1481, 1639, 2321
AhlI ACTAGT 1 cut(s) 1726
AjnI CCWGG 3 cut(s) 622, 874, 1689
AleI CACNNNNGTG 1 cut(s) 2017
Alw21I GWGCWC 1 cut(s) 1340
Alw26I GTCTC 2 cut(s) 425, 506
AlwI GGATC 3 cut(s) 268, 953, 1934
AlwNI CAGNNNCTG 2 cut(s) 515, 900
Ama87I CYCGRG 2 cut(s) 464, 2015
Aor13HI TCCGGA 3 cut(s) 524, 1279, 1404
AoxI GGCC 1 cut(s) 920
ApeKI GCWGC 7 cut(s) 25, 101, 818, 1367, 1370, 2077, 2094
ApoI RAATTY 6 cut(s) 505, 865, 1247, 1389, 1634, 1736
ArsI GACNNNNNNTTYG 4 cut(s) 128, 160, 2040, 2072
Asp700I GAANNNNTTC 1 cut(s) 1634
AspLEI GCGC 2 cut(s) 534, 1432
AspS9I GGNCC 1 cut(s) 872
AsuC2I CCSGG 2 cut(s) 465, 466
AsuHPI GGTGA 6 cut(s) 146, 326, 1637, 1679, 1787, 2192
AvaI CYCGRG 2 cut(s) 464, 2015
AvaII GGWCC 1 cut(s) 872
AxyI CCTNAGG 1 cut(s) 255
BaeI ACNNNNGTAYC 4 cut(s) 880, 913, 1304, 1337
BbsI GAAGAC 3 cut(s) 489, 1221, 2280
Bbv12I GWGCWC 1 cut(s) 1340
BbvI GCAGC 7 cut(s) 12, 113, 805, 1354, 1357, 2064, 2081
BccI CCATC 5 cut(s) 136, 551, 755, 931, 2362
BceAI ACGGC 1 cut(s) 1180
BciT130I CCWGG 3 cut(s) 624, 876, 1691
BciVI GTATCC 3 cut(s) 235, 938, 2276
BclI TGATCA 1 cut(s) 1909
BcnI CCSGG 2 cut(s) 465, 466
BcoDI GTCTC 2 cut(s) 425, 506
BcuI ACTAGT 1 cut(s) 1726
BfaI CTAG 6 cut(s) 447, 542, 1308, 1511, 1682, 1727
BfmI CTRYAG 5 cut(s) 99, 219, 1371, 2059, 2095
BfoI RGCGCY 1 cut(s) 535
BfuAI ACCTGC 1 cut(s) 95
BfuI GTATCC 3 cut(s) 235, 938, 2276
BglII AGATCT 1 cut(s) 1033
BisI GCNGC 8 cut(s) 26, 102, 819, 836, 1368, 1371, 2078, 2095
BlsI GCNGC 8 cut(s) 27, 103, 820, 837, 1369, 1372, 2079, 2096
Bme1390I CCNGG 5 cut(s) 465, 466, 624, 876, 1691
Bme18I GGWCC 1 cut(s) 872
BmeT110I CYCGRG 2 cut(s) 464, 2015
BmgT120I GGNCC 1 cut(s) 872
BmiI GGNNCC 1 cut(s) 873
BmrFI CCNGG 5 cut(s) 465, 466, 624, 876, 1691
BmrI ACTGGG 3 cut(s) 621, 1782, 2161
BmsI GCATC 4 cut(s) 373, 958, 1590, 2304
BmuI ACTGGG 3 cut(s) 621, 1782, 2161
BpiI GAAGAC 3 cut(s) 489, 1221, 2280
BpmI CTGGAG 2 cut(s) 1063, 2102
BpuEI CTTGAG 2 cut(s) 294, 1762
BpuMI CCSGG 2 cut(s) 465, 466
BsaBI GATNNNNATC 1 cut(s) 561
BsaJI CCNNGG 2 cut(s) 464, 2214
BsaWI WCCGGW 3 cut(s) 524, 1279, 1404
BsaXI ACNNNNNCTCC 2 cut(s) 1786, 1816
Bsc4I CCNNNNNNNGG 1 cut(s) 1794
Bse118I RCCGGY 1 cut(s) 386
Bse1I ACTGG 5 cut(s) 616, 648, 1080, 1788, 2156
Bse21I CCTNAGG 1 cut(s) 255
Bse3DI GCAATG 4 cut(s) 12, 811, 1174, 1753
Bse8I GATNNNNATC 1 cut(s) 561
BseAI TCCGGA 3 cut(s) 524, 1279, 1404
BseBI CCWGG 3 cut(s) 624, 876, 1691
BseDI CCNNGG 2 cut(s) 464, 2214
BseGI GGATG 7 cut(s) 329, 923, 1288, 1869, 1912, 2224, 2354
BseJI GATNNNNATC 1 cut(s) 561
BseLI CCNNNNNNNGG 1 cut(s) 1794
BseMI GCAATG 4 cut(s) 12, 811, 1174, 1753
BseMII CTCAG 4 cut(s) 720, 766, 1325, 1904
BseNI ACTGG 5 cut(s) 616, 648, 1080, 1788, 2156
BseRI GAGGAG 2 cut(s) 103, 498
BseXI GCAGC 7 cut(s) 12, 113, 805, 1354, 1357, 2064, 2081
BseYI CCCAGC 1 cut(s) 813
BsgI GTGCAG 4 cut(s) 234, 886, 1109, 2330
BshFI GGCC 1 cut(s) 922
BsiHKAI GWGCWC 1 cut(s) 1340
BsiHKCI CYCGRG 2 cut(s) 464, 2015
BsiSI CCGG 5 cut(s) 387, 465, 525, 1280, 1405
BslFI GGGAC 3 cut(s) 628, 743, 1725
BslI CCNNNNNNNGG 1 cut(s) 1794
BsmAI GTCTC 2 cut(s) 425, 506
BsmBI CGTCTC 1 cut(s) 425
BsmFI GGGAC 3 cut(s) 628, 743, 1725
BsmI GAATGC 1 cut(s) 938
BsnI GGCC 1 cut(s) 922
BsoBI CYCGRG 2 cut(s) 464, 2015
Bsp1286I GDGCHC 1 cut(s) 1340
Bsp13I TCCGGA 3 cut(s) 524, 1279, 1404
Bsp143I GATC 6 cut(s) 260, 958, 1033, 1909, 1926, 2085
BspACI CCGC 2 cut(s) 410, 836
BspANI GGCC 1 cut(s) 922
BspCNI CTCAG 4 cut(s) 719, 765, 1326, 1903
BspEI TCCGGA 3 cut(s) 524, 1279, 1404
BspHI TCATGA 1 cut(s) 375
BspLI GGNNCC 1 cut(s) 873
BspMAI CTGCAG 3 cut(s) 103, 1375, 2099
BspMI ACCTGC 1 cut(s) 95
BspPI GGATC 3 cut(s) 268, 953, 1934
BspQI GCTCTTC 1 cut(s) 1289
BsrDI GCAATG 4 cut(s) 12, 811, 1174, 1753
BsrFI RCCGGY 1 cut(s) 386
BsrI ACTGG 5 cut(s) 616, 648, 1080, 1788, 2156
BssAI RCCGGY 1 cut(s) 386
BssECI CCNNGG 2 cut(s) 464, 2214
BssMI GATC 6 cut(s) 260, 958, 1033, 1909, 1926, 2085
BssT1I CCWWGG 1 cut(s) 2214
Bst2UI CCWGG 3 cut(s) 624, 876, 1691
Bst4CI ACNGT 9 cut(s) 268, 287, 495, 619, 896, 983, 1595, 1877, 2245
Bst6I CTCTTC 3 cut(s) 1289, 1845, 2124
BstAPI GCANNNNNTGC 1 cut(s) 86
BstC8I GCNNGC 4 cut(s) 57, 249, 1056, 1762
BstDEI CTNAG 7 cut(s) 255, 579, 706, 752, 1019, 1334, 1890
BstF5I GGATG 7 cut(s) 329, 923, 1288, 1869, 1912, 2224, 2354
BstH2I RGCGCY 1 cut(s) 535
BstHHI GCGC 2 cut(s) 534, 1432
BstKTI GATC 6 cut(s) 263, 961, 1036, 1912, 1929, 2088
BstMAI GTCTC 2 cut(s) 425, 506
BstMBI GATC 6 cut(s) 260, 958, 1033, 1909, 1926, 2085
BstMWI GCNNNNNNNGC 6 cut(s) 31, 86, 416, 538, 810, 1106
BstNI CCWGG 3 cut(s) 624, 876, 1691
BstNSI RCATGY 3 cut(s) 1119, 1418, 2342
BstSCI CCNGG 5 cut(s) 463, 464, 622, 874, 1689
BstSFI CTRYAG 5 cut(s) 99, 219, 1371, 2059, 2095
BstV1I GCAGC 7 cut(s) 12, 113, 805, 1354, 1357, 2064, 2081
BstV2I GAAGAC 3 cut(s) 489, 1221, 2280
BstX2I RGATCY 2 cut(s) 1033, 1926
BstYI RGATCY 2 cut(s) 1033, 1926
Bsu36I CCTNAGG 1 cut(s) 255
BsuI GTATCC 3 cut(s) 235, 938, 2276
BsuRI GGCC 1 cut(s) 922
BtsCI GGATG 7 cut(s) 329, 923, 1288, 1869, 1912, 2224, 2354
BtsI GCAGTG 1 cut(s) 573
BtsIMutI CAGTG 6 cut(s) 273, 292, 573, 609, 1600, 1873
BveI ACCTGC 1 cut(s) 95
Cac8I GCNNGC 4 cut(s) 57, 249, 1056, 1762
CaiI CAGNNNCTG 2 cut(s) 515, 900
CciI TCATGA 1 cut(s) 375
CfoI GCGC 2 cut(s) 534, 1432
Cfr10I RCCGGY 1 cut(s) 386
Cfr13I GGNCC 1 cut(s) 872
Cfr9I CCCGGG 1 cut(s) 464
CsiI ACCWGGT 1 cut(s) 1689
Csp6I GTAC 5 cut(s) 229, 744, 1313, 1857, 2336
CviQI GTAC 5 cut(s) 229, 744, 1313, 1857, 2336
DdeI CTNAG 7 cut(s) 255, 579, 706, 752, 1019, 1334, 1890
DpnI GATC 6 cut(s) 262, 960, 1035, 1911, 1928, 2087
DpnII GATC 6 cut(s) 260, 958, 1033, 1909, 1926, 2085
Eam1104I CTCTTC 3 cut(s) 1289, 1845, 2124
EarI CTCTTC 3 cut(s) 1289, 1845, 2124
Eco130I CCWWGG 1 cut(s) 2214
Eco47I GGWCC 1 cut(s) 872
Eco57I CTGAAG 1 cut(s) 1248
Eco81I CCTNAGG 1 cut(s) 255
Eco88I CYCGRG 2 cut(s) 464, 2015
EcoO109I RGGNCCY 1 cut(s) 872
EcoRI GAATTC 3 cut(s) 865, 1634, 1736
EcoRII CCWGG 3 cut(s) 622, 874, 1689
EcoT14I CCWWGG 1 cut(s) 2214
EcoT22I ATGCAT 1 cut(s) 973
ErhI CCWWGG 1 cut(s) 2214
Esp3I CGTCTC 1 cut(s) 425
FalI AAGNNNNNCTT 4 cut(s) 1002, 1034, 2163, 2195
FaqI GGGAC 3 cut(s) 628, 743, 1725
FauNDI CATATG 1 cut(s) 1204
FbaI TGATCA 1 cut(s) 1909
FblI GTMKAC 1 cut(s) 637
Fnu4HI GCNGC 8 cut(s) 26, 102, 819, 836, 1368, 1371, 2078, 2095
FokI GGATG 7 cut(s) 316, 910, 1295, 1856, 1919, 2231, 2341
Fsp4HI GCNGC 8 cut(s) 26, 102, 819, 836, 1368, 1371, 2078, 2095
FspBI CTAG 6 cut(s) 447, 542, 1308, 1511, 1682, 1727
FspI TGCGCA 1 cut(s) 1431
GlaI GCGC 2 cut(s) 533, 1431
GluI GCNGC 8 cut(s) 26, 102, 819, 836, 1368, 1371, 2078, 2095
GsaI CCCAGC 1 cut(s) 817
GsuI CTGGAG 2 cut(s) 1063, 2102
HaeII RGCGCY 1 cut(s) 535
HaeIII GGCC 1 cut(s) 922
HapII CCGG 5 cut(s) 387, 465, 525, 1280, 1405
HhaI GCGC 2 cut(s) 534, 1432
Hin6I GCGC 2 cut(s) 532, 1430
HinP1I GCGC 2 cut(s) 532, 1430
HindIII AAGCTT 1 cut(s) 1762
HinfI GANTC 9 cut(s) 413, 442, 562, 656, 992, 1497, 1607, 1678, 1963
HpaII CCGG 5 cut(s) 387, 465, 525, 1280, 1405
HphI GGTGA 6 cut(s) 146, 326, 1637, 1679, 1787, 2192
Hpy166II GTNNAC 7 cut(s) 271, 573, 638, 1162, 1537, 1687, 1857
Hpy8I GTNNAC 7 cut(s) 271, 573, 638, 1162, 1537, 1687, 1857
HpyAV CCTTC 5 cut(s) 626, 1249, 1465, 1616, 2315
HpyCH4III ACNGT 9 cut(s) 268, 287, 495, 619, 896, 983, 1595, 1877, 2245
HpyCH4IV ACGT 4 cut(s) 434, 718, 1315, 1801
HpyF10VI GCNNNNNNNGC 6 cut(s) 31, 86, 416, 538, 810, 1106
HpyF3I CTNAG 7 cut(s) 255, 579, 706, 752, 1019, 1334, 1890
HpySE526I ACGT 4 cut(s) 434, 718, 1315, 1801
HspAI GCGC 2 cut(s) 532, 1430
Kpn2I TCCGGA 3 cut(s) 524, 1279, 1404
Ksp22I TGATCA 1 cut(s) 1909
Kzo9I GATC 6 cut(s) 260, 958, 1033, 1909, 1926, 2085
LguI GCTCTTC 1 cut(s) 1289
LmnI GCTCC 1 cut(s) 1474
Lsp1109I GCAGC 7 cut(s) 12, 113, 805, 1354, 1357, 2064, 2081
LweI GCATC 4 cut(s) 373, 958, 1590, 2304
MabI ACCWGGT 1 cut(s) 1689
MaeI CTAG 6 cut(s) 447, 542, 1308, 1511, 1682, 1727
MaeII ACGT 4 cut(s) 434, 718, 1315, 1801
MaeIII GTNAC 5 cut(s) 107, 134, 389, 887, 2165
MalI GATC 6 cut(s) 262, 960, 1035, 1911, 1928, 2087
MboI GATC 6 cut(s) 260, 958, 1033, 1909, 1926, 2085
MflI RGATCY 2 cut(s) 1033, 1926
MhlI GDGCHC 1 cut(s) 1340
MlyI GAGTC 3 cut(s) 422, 665, 1601
MmeI TCCRAC 3 cut(s) 1160, 1675, 1772
Mph1103I ATGCAT 1 cut(s) 973
MroI TCCGGA 3 cut(s) 524, 1279, 1404
MroXI GAANNNNTTC 1 cut(s) 1634
MseI TTAA 5 cut(s) 858, 1094, 1227, 1581, 2144
MslI CAYNNNNRTG 2 cut(s) 1917, 2017
MspI CCGG 5 cut(s) 387, 465, 525, 1280, 1405
MspR9I CCNGG 5 cut(s) 465, 466, 624, 876, 1691
Mva1269I GAATGC 1 cut(s) 938
MvaI CCWGG 3 cut(s) 624, 876, 1691
MwoI GCNNNNNNNGC 6 cut(s) 31, 86, 416, 538, 810, 1106
NciI CCSGG 2 cut(s) 465, 466
NdeI CATATG 1 cut(s) 1204
NdeII GATC 6 cut(s) 260, 958, 1033, 1909, 1926, 2085
NlaIV GGNNCC 1 cut(s) 873
NmuCI GTSAC 1 cut(s) 134
NsbI TGCGCA 1 cut(s) 1431
NsiI ATGCAT 1 cut(s) 973
NspI RCATGY 3 cut(s) 1119, 1418, 2342
OliI CACNNNNGTG 1 cut(s) 2017
PagI TCATGA 1 cut(s) 375
PciI ACATGT 2 cut(s) 1414, 2338
PciSI GCTCTTC 1 cut(s) 1289
PctI GAATGC 1 cut(s) 938
PdmI GAANNNNTTC 1 cut(s) 1634
PfeI GAWTC 6 cut(s) 442, 562, 992, 1497, 1678, 1963
PkrI GCNGC 8 cut(s) 27, 103, 820, 837, 1369, 1372, 2079, 2096
PleI GAGTC 3 cut(s) 421, 664, 1601
PpsI GAGTC 3 cut(s) 421, 664, 1601
PpuMI RGGWCCY 1 cut(s) 872
PscI ACATGT 2 cut(s) 1414, 2338
PsiI TTATAA 1 cut(s) 2160
Psp1406I AACGTT 1 cut(s) 718
Psp5II RGGWCCY 1 cut(s) 872
Psp6I CCWGG 3 cut(s) 622, 874, 1689
PspFI CCCAGC 1 cut(s) 813
PspGI CCWGG 3 cut(s) 622, 874, 1689
PspN4I GGNNCC 1 cut(s) 873
PspPI GGNCC 1 cut(s) 872
PspPPI RGGWCCY 1 cut(s) 872
PstI CTGCAG 3 cut(s) 103, 1375, 2099
PstNI CAGNNNCTG 2 cut(s) 515, 900
PsuI RGATCY 2 cut(s) 1033, 1926
RsaI GTAC 5 cut(s) 230, 745, 1314, 1858, 2337
RsaNI GTAC 5 cut(s) 229, 744, 1313, 1857, 2336
RseI CAYNNNNRTG 2 cut(s) 1917, 2017
SapI GCTCTTC 1 cut(s) 1289
SaqAI TTAA 5 cut(s) 858, 1094, 1227, 1581, 2144
SatI GCNGC 8 cut(s) 26, 102, 819, 836, 1368, 1371, 2078, 2095
Sau3AI GATC 6 cut(s) 260, 958, 1033, 1909, 1926, 2085
Sau96I GGNCC 1 cut(s) 872
SchI GAGTC 3 cut(s) 422, 665, 1601
ScrFI CCNGG 5 cut(s) 465, 466, 624, 876, 1691
SduI GDGCHC 1 cut(s) 1340
SexAI ACCWGGT 1 cut(s) 1689
SfaNI GCATC 4 cut(s) 373, 958, 1590, 2304
SfcI CTRYAG 5 cut(s) 99, 219, 1371, 2059, 2095
SinI GGWCC 1 cut(s) 872
SmaI CCCGGG 1 cut(s) 466
SmiMI CAYNNNNRTG 2 cut(s) 1917, 2017
SmlI CTYRAG 2 cut(s) 309, 1741
SmoI CTYRAG 2 cut(s) 309, 1741
SpeI ACTAGT 1 cut(s) 1726
SrfI GCCCGGGC 1 cut(s) 466
SsiI CCGC 2 cut(s) 410, 836
SspI AATATT 2 cut(s) 779, 844
SspMI CTAG 6 cut(s) 447, 542, 1308, 1511, 1682, 1727
StyD4I CCNGG 5 cut(s) 463, 464, 622, 874, 1689
StyI CCWWGG 1 cut(s) 2214
TaaI ACNGT 9 cut(s) 268, 287, 495, 619, 896, 983, 1595, 1877, 2245
TaiI ACGT 4 cut(s) 437, 721, 1318, 1804
TaqI TCGA 4 cut(s) 263, 502, 1946, 2287
TatI WGTACW 1 cut(s) 2335
TauI GCSGC 1 cut(s) 838
TfiI GAWTC 6 cut(s) 442, 562, 992, 1497, 1678, 1963
Tru1I TTAA 5 cut(s) 858, 1094, 1227, 1581, 2144
Tru9I TTAA 5 cut(s) 858, 1094, 1227, 1581, 2144
TscAI CASTG 6 cut(s) 273, 292, 580, 616, 1600, 1880
TseFI GTSAC 1 cut(s) 134
TseI GCWGC 7 cut(s) 25, 101, 818, 1367, 1370, 2077, 2094
Tsp45I GTSAC 1 cut(s) 134
TspGWI ACGGA 2 cut(s) 731, 2190
TspMI CCCGGG 1 cut(s) 464
TspRI CASTG 6 cut(s) 273, 292, 580, 616, 1600, 1880
VpaK11BI GGWCC 1 cut(s) 872
XapI RAATTY 6 cut(s) 505, 865, 1247, 1389, 1634, 1736
XceI RCATGY 3 cut(s) 1119, 1418, 2342
XmaI CCCGGG 1 cut(s) 464
XmiI GTMKAC 1 cut(s) 637
XmnI GAANNNNTTC 1 cut(s) 1634
XspI CTAG 6 cut(s) 447, 542, 1308, 1511, 1682, 1727
Zsp2I ATGCAT 1 cut(s) 973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.