MD03G1020200.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
1558966 .. 1560029
1064 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1020200.v1.1.491

Sequence Viewer

Length: 981 bp
ATGAAAATGGGGGTGGGGTTTAACAAGAAACCTGTAAGATCTAGTACCGATATTGTTTTCGACTCGAATTTGCGCTCTTTTAGCTATGAAGAGCTACAAGAAGCTACAAATGGATTCAAGGAAGAATTAGGAAAGGGTGCTTTTGGAGTGGTTTTCAAAGGGGTGATGCAAATTGGTTTTGGTGTCGAAGTGGCGGTGAAGAAGCTACGCTATGTTATGCAAGATGTCGAGAAGGAGTTTAAAACAGAACTGAATGTAATTGGTAAGACGCATCATAAGAATCTGGTTCGTCTTTTCGGATATTGTGACGAGGGGCAACAGAGAATGGTAGTTTATGAGTTCTTGAGCAATGGCACACTGGCAAGCTTTCTTTTTTCAGATATCAAACCAAGTTGGAAACAGCGAATTGAAATCGCTTATGGCATTGCGAAAGGGCTTTTGTACTTGCATGAAGAGTGCAGCACGCAGATTATCCATTGTGACATAAAGCCACAGAACATACTTCTCGATGATTATTACACTCCTCGGATTTCTGATTTTGGATTAGCAAAACTTTTGATGATGAATCAGAGCCAGACTCATACCGCTATCCGAGGAACAAAAGGTTATGTTGCACCTGAGTGGTTCAGGAACTTGGCAATCACTACCAAAGTTGATGTGTACAGCTTTGGTGTTGTGCTGCTGGAGATTATTTGTTGTAGGAGAAATGTTGATGTGGAAGGTAACTTGGAAGAGAGAGCAATTTTAACGGATTGGGTTTATGATTGCTACGTTGAAGGAGTATTAGATGCTGTTGTAGATCATGAAGTTGAGGCCTTGGGTGATCGAGCGACACTGGAAAAGTTTGTGATGGTTGGGATTTGGTGCATTCAGGAAGATCCTTCTCTTAGGCCTACTATGAGGAGGGTTGTGCAGATGTTTGAAGCAGTTGTCGAAGTGCATGTTCCACCATGTCCATCTCCATATACCAGAGCAGGCTGA

Protein Analysis

327

Amino Acids

37.08

Weight (kDa)

5.74

Isoelectric Point (pI)

34.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 39 - 306 1.4e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 40 - 305 3.1e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 194, 585
AclWI GGATC 1 cut(s) 872
AcsI RAATTY 1 cut(s) 67
AfaI GTAC 3 cut(s) 46, 443, 662
AgsI TTSAA 5 cut(s) 118, 157, 410, 776, 923
AleI CACNNNNGTG 1 cut(s) 619
AluBI AGCT 6 cut(s) 84, 94, 104, 205, 366, 666
AluI AGCT 6 cut(s) 84, 94, 104, 205, 366, 666
AlwI GGATC 1 cut(s) 872
AoxI GGCC 2 cut(s) 813, 890
ApeKI GCWGC 2 cut(s) 459, 679
ApoI RAATTY 1 cut(s) 67
AspLEI GCGC 1 cut(s) 75
AsuHPI GGTGA 3 cut(s) 175, 208, 833
BbvI GCAGC 2 cut(s) 471, 666
BccI CCATC 2 cut(s) 844, 964
BfaI CTAG 1 cut(s) 42
BglII AGATCT 1 cut(s) 38
BisI GCNGC 2 cut(s) 460, 680
BlsI GCNGC 2 cut(s) 461, 681
BmsI GCATC 3 cut(s) 156, 280, 778
BplI GAGNNNNNCTC 2 cut(s) 562, 594
BpmI CTGGAG 1 cut(s) 704
BpuEI CTTGAG 1 cut(s) 364
BsaJI CCNNGG 3 cut(s) 524, 592, 816
Bse1I ACTGG 2 cut(s) 363, 840
Bse3DI GCAATG 2 cut(s) 355, 423
BseDI CCNNGG 3 cut(s) 524, 592, 816
BseMI GCAATG 2 cut(s) 355, 423
BseMII CTCAG 1 cut(s) 609
BseNI ACTGG 2 cut(s) 363, 840
BseRI GAGGAG 2 cut(s) 513, 916
BseXI GCAGC 2 cut(s) 471, 666
BsgI GTGCAG 2 cut(s) 478, 932
BshFI GGCC 2 cut(s) 815, 892
BsmI GAATGC 1 cut(s) 867
BsnI GGCC 2 cut(s) 815, 892
Bsp1407I TGTACA 1 cut(s) 660
Bsp143I GATC 4 cut(s) 38, 799, 823, 877
BspACI CCGC 2 cut(s) 194, 585
BspANI GGCC 2 cut(s) 815, 892
BspCNI CTCAG 1 cut(s) 610
BspHI TCATGA 1 cut(s) 802
BspPI GGATC 1 cut(s) 872
BspQI GCTCTTC 1 cut(s) 84
BsrDI GCAATG 2 cut(s) 355, 423
BsrGI TGTACA 1 cut(s) 660
BsrI ACTGG 2 cut(s) 363, 840
BssECI CCNNGG 3 cut(s) 524, 592, 816
BssMI GATC 4 cut(s) 38, 799, 823, 877
BssT1I CCWWGG 1 cut(s) 816
Bst6I CTCTTC 3 cut(s) 84, 447, 726
BstAUI TGTACA 1 cut(s) 660
BstC8I GCNNGC 3 cut(s) 364, 464, 976
BstDEI CTNAG 2 cut(s) 618, 887
BstHHI GCGC 1 cut(s) 75
BstKTI GATC 4 cut(s) 41, 802, 826, 880
BstMBI GATC 4 cut(s) 38, 799, 823, 877
BstMWI GCNNNNNNNGC 1 cut(s) 81
BstNSI RCATGY 1 cut(s) 944
BstV1I GCAGC 2 cut(s) 471, 666
BstX2I RGATCY 2 cut(s) 38, 877
BstYI RGATCY 2 cut(s) 38, 877
BsuRI GGCC 2 cut(s) 815, 892
BtsIMutI CAGTG 2 cut(s) 356, 833
Cac8I GCNNGC 3 cut(s) 364, 464, 976
CciI TCATGA 1 cut(s) 802
CfoI GCGC 1 cut(s) 75
CseI GACGC 1 cut(s) 277
Csp6I GTAC 3 cut(s) 45, 442, 661
CviAII CATG 4 cut(s) 449, 803, 941, 951
CviQI GTAC 3 cut(s) 45, 442, 661
DdeI CTNAG 2 cut(s) 618, 887
DpnI GATC 4 cut(s) 40, 801, 825, 879
DpnII GATC 4 cut(s) 38, 799, 823, 877
DraI TTTAAA 1 cut(s) 241
Eam1104I CTCTTC 3 cut(s) 84, 447, 726
EarI CTCTTC 3 cut(s) 84, 447, 726
Eco130I CCWWGG 1 cut(s) 816
Eco147I AGGCCT 2 cut(s) 815, 892
Eco32I GATATC 1 cut(s) 382
EcoRV GATATC 1 cut(s) 382
EcoT14I CCWWGG 1 cut(s) 816
ErhI CCWWGG 1 cut(s) 816
FaeI CATG 4 cut(s) 452, 806, 944, 954
FatI CATG 4 cut(s) 448, 802, 940, 950
Fnu4HI GCNGC 2 cut(s) 460, 680
Fsp4HI GCNGC 2 cut(s) 460, 680
FspBI CTAG 1 cut(s) 42
GlaI GCGC 1 cut(s) 74
GluI GCNGC 2 cut(s) 460, 680
GsuI CTGGAG 1 cut(s) 704
HaeIII GGCC 2 cut(s) 815, 892
HgaI GACGC 1 cut(s) 277
HhaI GCGC 1 cut(s) 75
Hin1II CATG 4 cut(s) 452, 806, 944, 954
Hin6I GCGC 1 cut(s) 73
HinP1I GCGC 1 cut(s) 73
HindIII AAGCTT 1 cut(s) 364
HinfI GANTC 5 cut(s) 62, 114, 280, 565, 577
HphI GGTGA 3 cut(s) 175, 208, 833
Hpy166II GTNNAC 1 cut(s) 661
Hpy188I TCNGA 6 cut(s) 299, 379, 528, 535, 570, 593
Hpy188III TCNNGA 6 cut(s) 229, 343, 506, 628, 803, 872
Hpy8I GTNNAC 1 cut(s) 661
HpyAV CCTTC 4 cut(s) 226, 713, 770, 891
HpyCH4IV ACGT 1 cut(s) 771
HpyCH4V TGCA 8 cut(s) 169, 220, 448, 459, 614, 867, 913, 940
HpyF10VI GCNNNNNNNGC 1 cut(s) 81
HpyF3I CTNAG 2 cut(s) 618, 887
HpySE526I ACGT 1 cut(s) 771
Hsp92II CATG 4 cut(s) 452, 806, 944, 954
HspAI GCGC 1 cut(s) 73
Kzo9I GATC 4 cut(s) 38, 799, 823, 877
LguI GCTCTTC 1 cut(s) 84
Lsp1109I GCAGC 2 cut(s) 471, 666
LweI GCATC 3 cut(s) 156, 280, 778
MaeI CTAG 1 cut(s) 42
MaeII ACGT 1 cut(s) 771
MaeIII GTNAC 3 cut(s) 305, 479, 722
MalI GATC 4 cut(s) 40, 801, 825, 879
MboI GATC 4 cut(s) 38, 799, 823, 877
MboII GAAGA 6 cut(s) 101, 134, 211, 464, 743, 887
MflI RGATCY 2 cut(s) 38, 877
MluCI AATT 6 cut(s) 67, 125, 171, 258, 405, 741
MlyI GAGTC 2 cut(s) 56, 571
MmeI TCCRAC 1 cut(s) 374
MnlI CCTC 6 cut(s) 304, 534, 587, 805, 894, 897
MseI TTAA 3 cut(s) 21, 240, 746
MslI CAYNNNNRTG 1 cut(s) 619
Mva1269I GAATGC 1 cut(s) 867
MwoI GCNNNNNNNGC 1 cut(s) 81
NdeII GATC 4 cut(s) 38, 799, 823, 877
NlaIII CATG 4 cut(s) 452, 806, 944, 954
NmuCI GTSAC 2 cut(s) 305, 479
NspI RCATGY 1 cut(s) 944
OliI CACNNNNGTG 1 cut(s) 619
PagI TCATGA 1 cut(s) 802
PceI AGGCCT 2 cut(s) 815, 892
PciSI GCTCTTC 1 cut(s) 84
PctI GAATGC 1 cut(s) 867
PfeI GAWTC 3 cut(s) 114, 280, 565
PkrI GCNGC 2 cut(s) 461, 681
PleI GAGTC 2 cut(s) 56, 571
PpsI GAGTC 2 cut(s) 56, 571
PsuI RGATCY 2 cut(s) 38, 877
RsaI GTAC 3 cut(s) 46, 443, 662
RsaNI GTAC 3 cut(s) 45, 442, 661
RseI CAYNNNNRTG 1 cut(s) 619
SapI GCTCTTC 1 cut(s) 84
SaqAI TTAA 3 cut(s) 21, 240, 746
SatI GCNGC 2 cut(s) 460, 680
Sau3AI GATC 4 cut(s) 38, 799, 823, 877
SchI GAGTC 2 cut(s) 56, 571
SfaNI GCATC 3 cut(s) 156, 280, 778
SmiMI CAYNNNNRTG 1 cut(s) 619
SmlI CTYRAG 1 cut(s) 343
SmoI CTYRAG 1 cut(s) 343
Sse9I AATT 6 cut(s) 67, 125, 171, 258, 405, 741
SseBI AGGCCT 2 cut(s) 815, 892
SsiI CCGC 2 cut(s) 194, 585
SspMI CTAG 1 cut(s) 42
StuI AGGCCT 2 cut(s) 815, 892
StyI CCWWGG 1 cut(s) 816
TaiI ACGT 1 cut(s) 774
TaqI TCGA 7 cut(s) 60, 65, 186, 228, 507, 826, 933
TasI AATT 6 cut(s) 67, 125, 171, 258, 405, 741
TatI WGTACW 2 cut(s) 441, 660
TfiI GAWTC 3 cut(s) 114, 280, 565
Tru1I TTAA 3 cut(s) 21, 240, 746
Tru9I TTAA 3 cut(s) 21, 240, 746
TscAI CASTG 2 cut(s) 363, 840
TseFI GTSAC 2 cut(s) 305, 479
TseI GCWGC 2 cut(s) 459, 679
Tsp45I GTSAC 2 cut(s) 305, 479
TspDTI ATGAA 5 cut(s) 17, 102, 465, 578, 819
TspGWI ACGGA 1 cut(s) 764
TspRI CASTG 2 cut(s) 363, 840
XapI RAATTY 1 cut(s) 67
XceI RCATGY 1 cut(s) 944
XspI CTAG 1 cut(s) 42
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.