Rorug05G0456500

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
63004991 .. 63005645
655 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0456500.1

Sequence Viewer

Length: 441 bp
ATGGCGCCGAAGGCTGAGAAGAAGCCCGCCGAGAAGAAGCCGGCCGAGAAGGCTCCCGCCGCAGAGAAGGCCCCCGCTGAGAAGAAGCCCAAGGCCGGCAAGAAGCTCCCTAAGGAGGCCGGAGCCGCCGCAGGAGACAAGAAGAAGAAGAGAAACAAGAAGAGCGTTGAGACCTACAAGATCTACATCTTCAAGGTCCTCAAGCAGGTCCACCCTGACATCGGAATCTCCAGCAAGGCCATGGGCATCATGAACAGCTTCATCAACGACATCTTCGAGAAGCTCGCTCAGGAGTCGTCGAGGCTTGCGAGGTACAACAAGAAGCCGACGATTACTTCTCGGGAGATTCAGACTGCTGTGAGGCTTGTGCTTCCTGGTGAATTGGCCAAGCACGCCGTTTCTGAGGGGACTAAGGCGGTGACCAAGTTCACTAGCTCTTGA

Protein Analysis

146

Amino Acids

15.94

Weight (kDa)

10.11

Isoelectric Point (pI)

30.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Histone PF00125 46 - 122 2.3e-20 Core histone H2A/H2B/H3/H4 domain
Histone_ABTB PF26281 76 - 145 4.4e-08 Histone domain in ABTB family protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 196
AccB1I GGYRCC 1 cut(s) 4
AciI CCGC 7 cut(s) 27, 57, 60, 75, 126, 129, 416
AcoI YGGCCR 2 cut(s) 42, 384
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 314
AfiI CCNNNNNNNGG 4 cut(s) 95, 115, 205, 221
AgsI TTSAA 1 cut(s) 193
AjnI CCWGG 1 cut(s) 373
AluBI AGCT 4 cut(s) 106, 258, 283, 435
AluI AGCT 4 cut(s) 106, 258, 283, 435
Alw26I GTCTC 2 cut(s) 129, 164
Ama87I CYCGRG 1 cut(s) 339
AoxI GGCC 6 cut(s) 42, 69, 93, 117, 237, 384
Asp700I GAANNNNTTC 1 cut(s) 257
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 3 cut(s) 70, 196, 208
AsuHPI GGTGA 2 cut(s) 389, 430
AvaI CYCGRG 1 cut(s) 339
AvaII GGWCC 2 cut(s) 196, 208
AxyI CCTNAGG 1 cut(s) 111
BalI TGGCCA 1 cut(s) 386
BanI GGYRCC 1 cut(s) 4
BceAI ACGGC 1 cut(s) 380
BciT130I CCWGG 1 cut(s) 375
BcoDI GTCTC 2 cut(s) 129, 164
BfaI CTAG 1 cut(s) 432
BfoI RGCGCY 1 cut(s) 8
BfuAI ACCTGC 1 cut(s) 196
BglI GCCNNNNNGGC 1 cut(s) 50
BglII AGATCT 1 cut(s) 180
BisI GCNGC 3 cut(s) 60, 126, 129
BlsI GCNGC 3 cut(s) 61, 127, 130
Bme1390I CCNGG 1 cut(s) 375
Bme18I GGWCC 2 cut(s) 196, 208
BmeT110I CYCGRG 1 cut(s) 339
BmgT120I GGNCC 3 cut(s) 70, 196, 208
BmiI GGNNCC 4 cut(s) 6, 54, 72, 124
BmrFI CCNGG 1 cut(s) 375
BmsI GCATC 1 cut(s) 255
BpmI CTGGAG 1 cut(s) 214
Bpu10I CCTNAGC 1 cut(s) 288
BpuEI CTTGAG 1 cut(s) 185
BsaBI GATNNNNATC 1 cut(s) 185
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 164
BsaJI CCNNGG 2 cut(s) 90, 240
Bsc4I CCNNNNNNNGG 4 cut(s) 95, 115, 205, 221
Bse118I RCCGGY 2 cut(s) 40, 95
Bse21I CCTNAGG 1 cut(s) 111
Bse8I GATNNNNATC 1 cut(s) 185
BseBI CCWGG 1 cut(s) 375
BseDI CCNNGG 2 cut(s) 90, 240
BseJI GATNNNNATC 1 cut(s) 185
BseLI CCNNNNNNNGG 4 cut(s) 95, 115, 205, 221
BseMII CTCAG 4 cut(s) 6, 69, 302, 393
BseX3I CGGCCG 1 cut(s) 42
Bsh1285I CGRYCG 1 cut(s) 45
BshFI GGCC 6 cut(s) 44, 71, 95, 119, 239, 386
BshNI GGYRCC 1 cut(s) 4
BsiEI CGRYCG 1 cut(s) 45
BsiHKCI CYCGRG 1 cut(s) 339
BsiSI CCGG 3 cut(s) 41, 96, 120
BslFI GGGAC 1 cut(s) 421
BslI CCNNNNNNNGG 4 cut(s) 95, 115, 205, 221
BsmAI GTCTC 2 cut(s) 129, 164
BsmFI GGGAC 1 cut(s) 421
BsnI GGCC 6 cut(s) 44, 71, 95, 119, 239, 386
Bso31I GGTCTC 1 cut(s) 164
BsoBI CYCGRG 1 cut(s) 339
Bsp143I GATC 1 cut(s) 180
Bsp19I CCATGG 1 cut(s) 240
BspACI CCGC 7 cut(s) 27, 57, 60, 75, 126, 129, 416
BspANI GGCC 6 cut(s) 44, 71, 95, 119, 239, 386
BspCNI CTCAG 4 cut(s) 7, 70, 301, 394
BspHI TCATGA 1 cut(s) 249
BspLI GGNNCC 4 cut(s) 6, 54, 72, 124
BspMI ACCTGC 1 cut(s) 196
BspQI GCTCTTC 1 cut(s) 155
BspT107I GGYRCC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 164
BsrFI RCCGGY 2 cut(s) 40, 95
BssAI RCCGGY 2 cut(s) 40, 95
BssECI CCNNGG 2 cut(s) 90, 240
BssMI GATC 1 cut(s) 180
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 90, 240
Bst2UI CCWGG 1 cut(s) 375
Bst6I CTCTTC 2 cut(s) 143, 155
BstACI GRCGYC 1 cut(s) 5
BstC8I GCNNGC 6 cut(s) 27, 42, 97, 285, 306, 393
BstDEI CTNAG 6 cut(s) 15, 78, 111, 288, 402, 411
BstDSI CCRYGG 1 cut(s) 240
BstEII GGTNACC 1 cut(s) 418
BstENI CCTNNNNNAGG 1 cut(s) 203
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 1 cut(s) 183
BstMAI GTCTC 2 cut(s) 129, 164
BstMBI GATC 1 cut(s) 180
BstMCI CGRYCG 1 cut(s) 45
BstMWI GCNNNNNNNGC 6 cut(s) 11, 50, 59, 68, 125, 392
BstNI CCWGG 1 cut(s) 375
BstPI GGTNACC 1 cut(s) 418
BstSCI CCNGG 1 cut(s) 373
BstX2I RGATCY 1 cut(s) 180
BstYI RGATCY 1 cut(s) 180
BstZI CGGCCG 1 cut(s) 42
Bsu36I CCTNAGG 1 cut(s) 111
BsuRI GGCC 6 cut(s) 44, 71, 95, 119, 239, 386
BtgI CCRYGG 1 cut(s) 240
BveI ACCTGC 1 cut(s) 196
Cac8I GCNNGC 6 cut(s) 27, 42, 97, 285, 306, 393
CciI TCATGA 1 cut(s) 249
CfoI GCGC 1 cut(s) 7
Cfr10I RCCGGY 2 cut(s) 40, 95
Cfr13I GGNCC 3 cut(s) 70, 196, 208
Csp6I GTAC 1 cut(s) 313
CviAII CATG 2 cut(s) 241, 250
CviQI GTAC 1 cut(s) 313
DdeI CTNAG 6 cut(s) 15, 78, 111, 288, 402, 411
DinI GGCGCC 1 cut(s) 6
DpnI GATC 1 cut(s) 182
DpnII GATC 1 cut(s) 180
EaeI YGGCCR 2 cut(s) 42, 384
EagI CGGCCG 1 cut(s) 42
Eam1104I CTCTTC 2 cut(s) 143, 155
EarI CTCTTC 2 cut(s) 143, 155
EclXI CGGCCG 1 cut(s) 42
Eco130I CCWWGG 2 cut(s) 90, 240
Eco31I GGTCTC 1 cut(s) 164
Eco47I GGWCC 2 cut(s) 196, 208
Eco52I CGGCCG 1 cut(s) 42
Eco81I CCTNAGG 1 cut(s) 111
Eco88I CYCGRG 1 cut(s) 339
Eco91I GGTNACC 1 cut(s) 418
EcoNI CCTNNNNNAGG 1 cut(s) 203
EcoO109I RGGNCCY 2 cut(s) 70, 196
EcoO65I GGTNACC 1 cut(s) 418
EcoRII CCWGG 1 cut(s) 373
EcoT14I CCWWGG 2 cut(s) 90, 240
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 90, 240
FaeI CATG 2 cut(s) 244, 253
FaiI YATR 2 cut(s) 242, 251
FaqI GGGAC 1 cut(s) 421
FatI CATG 2 cut(s) 240, 249
FauI CCCGC 3 cut(s) 34, 64, 82
Fnu4HI GCNGC 3 cut(s) 60, 126, 129
Fsp4HI GCNGC 3 cut(s) 60, 126, 129
FspBI CTAG 1 cut(s) 432
GlaI GCGC 1 cut(s) 6
GluI GCNGC 3 cut(s) 60, 126, 129
GsuI CTGGAG 1 cut(s) 214
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 6 cut(s) 44, 71, 95, 119, 239, 386
HapII CCGG 3 cut(s) 41, 96, 120
HhaI GCGC 1 cut(s) 7
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 2 cut(s) 244, 253
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HinfI GANTC 3 cut(s) 225, 293, 346
HpaII CCGG 3 cut(s) 41, 96, 120
HphI GGTGA 2 cut(s) 389, 430
Hpy166II GTNNAC 2 cut(s) 211, 429
Hpy188I TCNGA 3 cut(s) 224, 351, 403
Hpy188III TCNNGA 5 cut(s) 250, 277, 290, 341, 438
Hpy8I GTNNAC 2 cut(s) 211, 429
Hpy99I CGWCG 2 cut(s) 301, 331
HpyAV CCTTC 3 cut(s) 4, 43, 61
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 50, 59, 68, 125, 392
HpyF3I CTNAG 6 cut(s) 15, 78, 111, 288, 402, 411
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 2 cut(s) 244, 253
HspAI GCGC 1 cut(s) 5
KasI GGCGCC 1 cut(s) 4
KroI GCCGGC 2 cut(s) 40, 95
KroNI GCCGGC 2 cut(s) 42, 97
Kzo9I GATC 1 cut(s) 180
LguI GCTCTTC 1 cut(s) 155
LmnI GCTCC 3 cut(s) 58, 111, 122
LweI GCATC 1 cut(s) 255
MaeI CTAG 1 cut(s) 432
MaeIII GTNAC 1 cut(s) 418
MalI GATC 1 cut(s) 182
MboI GATC 1 cut(s) 180
MboII GAAGA 9 cut(s) 31, 46, 94, 154, 157, 160, 172, 181, 265
MflI RGATCY 1 cut(s) 180
MlsI TGGCCA 1 cut(s) 386
MluCI AATT 1 cut(s) 380
MluNI TGGCCA 1 cut(s) 386
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 302
MnlI CCTC 6 cut(s) 109, 209, 294, 303, 354, 397
Mox20I TGGCCA 1 cut(s) 386
MroNI GCCGGC 2 cut(s) 40, 95
MroXI GAANNNNTTC 1 cut(s) 257
MscI TGGCCA 1 cut(s) 386
Msp20I TGGCCA 1 cut(s) 386
MspA1I CMGCKG 1 cut(s) 77
MspI CCGG 3 cut(s) 41, 96, 120
MspR9I CCNGG 1 cut(s) 375
MvaI CCWGG 1 cut(s) 375
MwoI GCNNNNNNNGC 6 cut(s) 11, 50, 59, 68, 125, 392
NaeI GCCGGC 2 cut(s) 42, 97
NarI GGCGCC 1 cut(s) 5
NcoI CCATGG 1 cut(s) 240
NdeII GATC 1 cut(s) 180
NgoMIV GCCGGC 2 cut(s) 40, 95
NlaIII CATG 2 cut(s) 244, 253
NlaIV GGNNCC 4 cut(s) 6, 54, 72, 124
NmeAIII GCCGAG 2 cut(s) 55, 70
NmuCI GTSAC 1 cut(s) 418
PagI TCATGA 1 cut(s) 249
PciSI GCTCTTC 1 cut(s) 155
PcsI WCGNNNNNNNCGW 2 cut(s) 273, 305
PdiI GCCGGC 2 cut(s) 42, 97
PdmI GAANNNNTTC 1 cut(s) 257
PfeI GAWTC 2 cut(s) 225, 346
PkrI GCNGC 3 cut(s) 61, 127, 130
PleI GAGTC 1 cut(s) 301
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 301
PpuMI RGGWCCY 1 cut(s) 196
Psp5II RGGWCCY 1 cut(s) 196
Psp6I CCWGG 1 cut(s) 373
PspEI GGTNACC 1 cut(s) 418
PspGI CCWGG 1 cut(s) 373
PspN4I GGNNCC 4 cut(s) 6, 54, 72, 124
PspPI GGNCC 3 cut(s) 70, 196, 208
PspPPI RGGWCCY 1 cut(s) 196
PsuI RGATCY 1 cut(s) 180
RsaI GTAC 1 cut(s) 314
RsaNI GTAC 1 cut(s) 313
SapI GCTCTTC 1 cut(s) 155
SatI GCNGC 3 cut(s) 60, 126, 129
Sau3AI GATC 1 cut(s) 180
Sau96I GGNCC 3 cut(s) 70, 196, 208
SchI GAGTC 1 cut(s) 302
ScrFI CCNGG 1 cut(s) 375
SetI ASST 8 cut(s) 108, 176, 198, 210, 260, 285, 314, 437
SfaNI GCATC 1 cut(s) 255
SfoI GGCGCC 1 cut(s) 6
SinI GGWCC 2 cut(s) 196, 208
SmlI CTYRAG 1 cut(s) 200
SmoI CTYRAG 1 cut(s) 200
Sse9I AATT 1 cut(s) 380
SsiI CCGC 7 cut(s) 27, 57, 60, 75, 126, 129, 416
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 1 cut(s) 432
StyD4I CCNGG 1 cut(s) 373
StyI CCWWGG 2 cut(s) 90, 240
TaqI TCGA 2 cut(s) 276, 299
TasI AATT 1 cut(s) 380
TauI GCSGC 3 cut(s) 62, 128, 131
TfiI GAWTC 2 cut(s) 225, 346
TseFI GTSAC 1 cut(s) 418
Tsp45I GTSAC 1 cut(s) 418
TspDTI ATGAA 2 cut(s) 250, 266
VpaK11BI GGWCC 2 cut(s) 196, 208
XagI CCTNNNNNAGG 1 cut(s) 203
XcmI CCANNNNNNNNNTGG 1 cut(s) 238
XmnI GAANNNNTTC 1 cut(s) 257
XspI CTAG 1 cut(s) 432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.