MD03G1019900.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
1554957 .. 1555810
854 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1019900.v1.1.491

Sequence Viewer

Length: 834 bp
ATGTGGTACACACATCTAATTCCAGGAAGAAACTTGAGACAAAGACATGCATGGAGATTAGTCAAGCCTAAACTATGGTACACATGCATTTCCATCAAGAAATTTCAAGGAAACAATGCTTCATTGATATATATATTGCTAATTAAGCTAGGTCGAAATATTGGTGCATTTGCAATGGCAATGACTTTTCCTGTACGGATGCTTTTGTTCACCTCATTGTTTTTGCTACCAATTTCTGTGTTTTCCCAAAATAATGGAAGAGTAGCAGTTGGAGATTCTCTAACTGCAACTACAGGTGACTCCTCATCATGGCTTTATCCATCCGGTGATTTCGCATTTGGATTTAAGCCCCTCGGAAACAATGATCGTTTCTTGCTTTCTATATGGTATGCGAAAATCCCAGAAACCGTAGTTTGGTACGCAATTAAGGATAACAGCCCCGTGGTTACACCTTGGGGATCAATTTTGAACTTGACTGCCGACAGTGGACTAGTTCTTAACAATCCTCAGGGTGGAGAGATATGGAAATCCCCTATAACTTCCGGGGTTGTTGCGAACGTGGTCATGAATGACACTGGAAACTTCGTCCTTCAAGATGAAAACTCGGGGAGCTTATGGGAGACCTTCAACAATCCTACAGACACCGTTTTGCCTGGACAGACAATTGAGAGAAAAGGGAAGCTTTCGTGTAAGCAATCGGAGGCTAATTACGAAAAAGGGCGGTTCCAGCTGCGCTTGCAAGATGATGGAAACCTCGTGCTCAACACCGTAAACTTGCCCACAGATTATGCCAACAAAGCCTTACTATGCCACAGGCACATTCTCGGGGGCTGA

Protein Analysis

278

Amino Acids

30.9

Weight (kDa)

9.34

Isoelectric Point (pI)

40.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 136 - 227 3.7e-14 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 721
AclWI GGATC 1 cut(s) 466
AcsI RAATTY 1 cut(s) 101
AfaI GTAC 4 cut(s) 8, 80, 195, 419
AfiI CCNNNNNNNGG 3 cut(s) 309, 414, 512
AgsI TTSAA 4 cut(s) 107, 469, 593, 628
AhlI ACTAGT 1 cut(s) 490
AjnI CCWGG 2 cut(s) 22, 652
AluBI AGCT 4 cut(s) 148, 612, 682, 730
AluI AGCT 4 cut(s) 148, 612, 682, 730
Alw21I GWGCWC 1 cut(s) 762
Alw26I GTCTC 2 cut(s) 31, 614
AlwI GGATC 1 cut(s) 466
Ama87I CYCGRG 2 cut(s) 604, 824
ApeKI GCWGC 1 cut(s) 730
ApoI RAATTY 1 cut(s) 101
AspLEI GCGC 1 cut(s) 735
AsuC2I CCSGG 1 cut(s) 544
AsuHPI GGTGA 3 cut(s) 202, 308, 338
AvaI CYCGRG 2 cut(s) 604, 824
AxyI CCTNAGG 1 cut(s) 507
BauI CACGAG 1 cut(s) 755
Bbv12I GWGCWC 1 cut(s) 762
BbvI GCAGC 1 cut(s) 717
BccI CCATC 3 cut(s) 101, 328, 740
BciT130I CCWGG 2 cut(s) 24, 654
BcnI CCSGG 1 cut(s) 544
BcoDI GTCTC 2 cut(s) 31, 614
BcuI ACTAGT 1 cut(s) 490
BfaI CTAG 2 cut(s) 149, 491
BfmI CTRYAG 2 cut(s) 291, 636
BisI GCNGC 1 cut(s) 731
BlsI GCNGC 1 cut(s) 732
Bme1390I CCNGG 3 cut(s) 24, 544, 654
BmeT110I CYCGRG 2 cut(s) 604, 824
BmiI GGNNCC 1 cut(s) 725
BmrFI CCNGG 3 cut(s) 24, 544, 654
BmsI GCATC 1 cut(s) 189
BpuEI CTTGAG 1 cut(s) 55
BpuMI CCSGG 1 cut(s) 544
BsaI GGTCTC 1 cut(s) 614
BsaJI CCNNGG 4 cut(s) 352, 441, 452, 543
BsaWI WCCGGW 1 cut(s) 323
Bsc4I CCNNNNNNNGG 3 cut(s) 309, 414, 512
Bse1I ACTGG 1 cut(s) 580
Bse21I CCTNAGG 1 cut(s) 507
Bse3DI GCAATG 2 cut(s) 180, 186
BseBI CCWGG 2 cut(s) 24, 654
BseDI CCNNGG 4 cut(s) 352, 441, 452, 543
BseGI GGATG 2 cut(s) 204, 320
BseLI CCNNNNNNNGG 3 cut(s) 309, 414, 512
BseMI GCAATG 2 cut(s) 180, 186
BseMII CTCAG 1 cut(s) 521
BseNI ACTGG 1 cut(s) 580
BseRI GAGGAG 1 cut(s) 292
BseXI GCAGC 1 cut(s) 717
BsiHKAI GWGCWC 1 cut(s) 762
BsiHKCI CYCGRG 2 cut(s) 604, 824
BsiSI CCGG 2 cut(s) 324, 543
BslI CCNNNNNNNGG 3 cut(s) 309, 414, 512
BsmAI GTCTC 2 cut(s) 31, 614
Bso31I GGTCTC 1 cut(s) 614
BsoBI CYCGRG 2 cut(s) 604, 824
Bsp1286I GDGCHC 1 cut(s) 762
Bsp143I GATC 2 cut(s) 364, 458
BspACI CCGC 1 cut(s) 721
BspCNI CTCAG 1 cut(s) 520
BspHI TCATGA 1 cut(s) 564
BspLI GGNNCC 1 cut(s) 725
BspPI GGATC 1 cut(s) 466
BspTNI GGTCTC 1 cut(s) 614
BsrDI GCAATG 2 cut(s) 180, 186
BsrI ACTGG 1 cut(s) 580
BssECI CCNNGG 4 cut(s) 352, 441, 452, 543
BssMI GATC 2 cut(s) 364, 458
BssSI CACGAG 1 cut(s) 755
BssT1I CCWWGG 1 cut(s) 452
Bst2BI CACGAG 1 cut(s) 755
Bst2UI CCWGG 2 cut(s) 24, 654
Bst4CI ACNGT 4 cut(s) 409, 485, 646, 769
Bst6I CTCTTC 1 cut(s) 253
BstC8I GCNNGC 1 cut(s) 737
BstDEI CTNAG 1 cut(s) 507
BstDSI CCRYGG 1 cut(s) 441
BstF5I GGATG 2 cut(s) 204, 320
BstHHI GCGC 1 cut(s) 735
BstKTI GATC 2 cut(s) 367, 461
BstMAI GTCTC 2 cut(s) 31, 614
BstMBI GATC 2 cut(s) 364, 458
BstMWI GCNNNNNNNGC 4 cut(s) 145, 727, 736, 797
BstNI CCWGG 2 cut(s) 24, 654
BstNSI RCATGY 2 cut(s) 50, 87
BstSCI CCNGG 3 cut(s) 22, 542, 652
BstSFI CTRYAG 2 cut(s) 291, 636
BstV1I GCAGC 1 cut(s) 717
BstXI CCANNNNNNTGG 1 cut(s) 254
Bsu36I CCTNAGG 1 cut(s) 507
BtgI CCRYGG 1 cut(s) 441
BtsCI GGATG 2 cut(s) 204, 320
BtsIMutI CAGTG 2 cut(s) 490, 573
Cac8I GCNNGC 1 cut(s) 737
CciI TCATGA 1 cut(s) 564
CfoI GCGC 1 cut(s) 735
Csp6I GTAC 4 cut(s) 7, 79, 194, 418
CviAII CATG 5 cut(s) 47, 51, 84, 309, 565
CviQI GTAC 4 cut(s) 7, 79, 194, 418
DdeI CTNAG 1 cut(s) 507
DpnI GATC 2 cut(s) 366, 460
DpnII GATC 2 cut(s) 364, 458
Eam1104I CTCTTC 1 cut(s) 253
EarI CTCTTC 1 cut(s) 253
Eco130I CCWWGG 1 cut(s) 452
Eco31I GGTCTC 1 cut(s) 614
Eco81I CCTNAGG 1 cut(s) 507
Eco88I CYCGRG 2 cut(s) 604, 824
EcoRII CCWGG 2 cut(s) 22, 652
EcoT14I CCWWGG 1 cut(s) 452
EcoT22I ATGCAT 2 cut(s) 52, 89
ErhI CCWWGG 1 cut(s) 452
FaeI CATG 5 cut(s) 50, 54, 87, 312, 568
FalI AAGNNNNNCTT 2 cut(s) 666, 698
FatI CATG 5 cut(s) 46, 50, 83, 308, 564
Fnu4HI GCNGC 1 cut(s) 731
FokI GGATG 2 cut(s) 211, 307
Fsp4HI GCNGC 1 cut(s) 731
FspBI CTAG 2 cut(s) 149, 491
GlaI GCGC 1 cut(s) 734
GluI GCNGC 1 cut(s) 731
HapII CCGG 2 cut(s) 324, 543
HhaI GCGC 1 cut(s) 735
Hin1II CATG 5 cut(s) 50, 54, 87, 312, 568
Hin6I GCGC 1 cut(s) 733
HinP1I GCGC 1 cut(s) 733
HindIII AAGCTT 1 cut(s) 680
HinfI GANTC 2 cut(s) 275, 299
HpaII CCGG 2 cut(s) 324, 543
HphI GGTGA 3 cut(s) 202, 308, 338
Hpy166II GTNNAC 5 cut(s) 9, 81, 210, 488, 772
Hpy188I TCNGA 2 cut(s) 356, 700
Hpy188III TCNNGA 3 cut(s) 97, 565, 593
Hpy8I GTNNAC 5 cut(s) 9, 81, 210, 488, 772
HpyAV CCTTC 2 cut(s) 599, 634
HpyCH4III ACNGT 4 cut(s) 409, 485, 646, 769
HpyCH4IV ACGT 1 cut(s) 558
HpyCH4V TGCA 6 cut(s) 50, 87, 167, 173, 287, 739
HpyF10VI GCNNNNNNNGC 4 cut(s) 145, 727, 736, 797
HpyF3I CTNAG 1 cut(s) 507
HpySE526I ACGT 1 cut(s) 558
Hsp92II CATG 5 cut(s) 50, 54, 87, 312, 568
HspAI GCGC 1 cut(s) 733
Kzo9I GATC 2 cut(s) 364, 458
LmnI GCTCC 1 cut(s) 609
Lsp1109I GCAGC 1 cut(s) 717
LweI GCATC 1 cut(s) 189
MaeI CTAG 2 cut(s) 149, 491
MaeII ACGT 1 cut(s) 558
MaeIII GTNAC 2 cut(s) 296, 445
MalI GATC 2 cut(s) 366, 460
MboI GATC 2 cut(s) 364, 458
MboII GAAGA 2 cut(s) 39, 270
MfeI CAATTG 1 cut(s) 663
MhlI GDGCHC 1 cut(s) 762
MluCI AATT 8 cut(s) 18, 101, 141, 231, 423, 462, 663, 706
MlyI GAGTC 1 cut(s) 293
MmeI TCCRAC 1 cut(s) 250
MnlI CCTC 6 cut(s) 223, 313, 362, 516, 694, 764
Mph1103I ATGCAT 2 cut(s) 52, 89
MseI TTAA 4 cut(s) 144, 345, 426, 498
MspA1I CMGCKG 1 cut(s) 730
MspI CCGG 2 cut(s) 324, 543
MspR9I CCNGG 3 cut(s) 24, 544, 654
MunI CAATTG 1 cut(s) 663
MvaI CCWGG 2 cut(s) 24, 654
MwoI GCNNNNNNNGC 4 cut(s) 145, 727, 736, 797
NciI CCSGG 1 cut(s) 544
NdeII GATC 2 cut(s) 364, 458
NlaIII CATG 5 cut(s) 50, 54, 87, 312, 568
NlaIV GGNNCC 1 cut(s) 725
NmuCI GTSAC 1 cut(s) 296
NsiI ATGCAT 2 cut(s) 52, 89
NspI RCATGY 2 cut(s) 50, 87
PagI TCATGA 1 cut(s) 564
PfeI GAWTC 1 cut(s) 275
PfoI TCCNGGA 1 cut(s) 22
PkrI GCNGC 1 cut(s) 732
PleI GAGTC 1 cut(s) 293
PpsI GAGTC 1 cut(s) 293
Psp6I CCWGG 2 cut(s) 22, 652
PspGI CCWGG 2 cut(s) 22, 652
PspN4I GGNNCC 1 cut(s) 725
PvuII CAGCTG 1 cut(s) 730
RsaI GTAC 4 cut(s) 8, 80, 195, 419
RsaNI GTAC 4 cut(s) 7, 79, 194, 418
SaqAI TTAA 4 cut(s) 144, 345, 426, 498
SatI GCNGC 1 cut(s) 731
Sau3AI GATC 2 cut(s) 364, 458
SchI GAGTC 1 cut(s) 293
ScrFI CCNGG 3 cut(s) 24, 544, 654
SduI GDGCHC 1 cut(s) 762
SfaNI GCATC 1 cut(s) 189
SfcI CTRYAG 2 cut(s) 291, 636
SmlI CTYRAG 1 cut(s) 34
SmoI CTYRAG 1 cut(s) 34
SpeI ACTAGT 1 cut(s) 490
Sse9I AATT 8 cut(s) 18, 101, 141, 231, 423, 462, 663, 706
SsiI CCGC 1 cut(s) 721
SspI AATATT 1 cut(s) 160
SspMI CTAG 2 cut(s) 149, 491
StyD4I CCNGG 3 cut(s) 22, 542, 652
StyI CCWWGG 1 cut(s) 452
TaaI ACNGT 4 cut(s) 409, 485, 646, 769
TaiI ACGT 1 cut(s) 561
TaqI TCGA 1 cut(s) 154
TasI AATT 8 cut(s) 18, 101, 141, 231, 423, 462, 663, 706
TfiI GAWTC 1 cut(s) 275
Tru1I TTAA 4 cut(s) 144, 345, 426, 498
Tru9I TTAA 4 cut(s) 144, 345, 426, 498
TscAI CASTG 2 cut(s) 490, 580
TseFI GTSAC 1 cut(s) 296
TseI GCWGC 1 cut(s) 730
Tsp45I GTSAC 1 cut(s) 296
TspDTI ATGAA 3 cut(s) 111, 581, 612
TspGWI ACGGA 1 cut(s) 211
TspRI CASTG 2 cut(s) 490, 580
XapI RAATTY 1 cut(s) 101
XceI RCATGY 2 cut(s) 50, 87
XspI CTAG 2 cut(s) 149, 491
Zsp2I ATGCAT 2 cut(s) 52, 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.