Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000631.1

Orthogroup ID

OG0000130

Physical Location & Seq

Genomic Coordinates Forward (+)

753 .. 2921

Gene Structure 2169 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000631.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

atggcaatgctttttactctatggctgcttatgcttctgctaccaatttatgtgcttgcacaaactaatggtagcgtagcagttggtgcttctctctctgcagcaggtaactcctcatggatttctccatctggtgactttgcttttggatttcggcaacttgaaaacaatggacttttcttgctttctatatggtttgccaagataccagacaaaactatagtttggtacgcaaatggggatacgcctgcacctaagggatcaacagtgaacttgactgccaacagtggattagtccttacaagtcctcaaggtgagaagctatggacatccaatgacactaacattattgctggtgtcgttgctcatggggtcatgaatgatgccggtaactttgttctggaaaatgcgaagtcagcaaagttatgggagacgttcaagaatcctactgatacaatgttgcccgggcaaataatggaaagaggagggaaactgtcttctcgaaattcagagactgactattccggagggcgcttccggctagattttcaaccagatgggaatcttgtgttcactgctaagaaaccttttcattcaactgcaactaccactgggactgttccaggtagtgaaggtcgacaacttgttttcaatgagtcgggcaacttctatattctgcgagtgaatggtggacatttcactttcacagatgaggaacgttcagcaagggactactatctccgtacaactctcagctttgatggggttttggctcaatatttcctcccaaagatttccaatggcaatgaaagctgggctgctctttggtcagatccgcctaatatttgccaaaaaattaagatgaattcgggtcctggtatttgtggttacaacagtatctgcactctcaaagcagataggaggccatcctgtgaatgcccaacaggatactctttacttgatccagcagatgcatacgggaactgttatccagattccaaacaaggctgtgaagatgagcttagttatacaaaagatctatatgatgttcaggtgcgagcaaatactgattggcttacctccagttatgtgcagttaaatgcttctactgctgacacatgcagtcaatcttgcttggaagattgtttgtgtgctgttgctgtttacggcaatgaaacctgttggaaaaagaagtttccactctcatatgggagagaagacagcacccttaatgcaaagaccttcatcaaattcaggaacgacacttcagctctacaagttccggatgataagaagaagagccagaccactaggaacatacttctggatgatcattacaatgctcggatctctgattttggcttgtcgaaacttctgatgatgaatcagagccagacatatactgccattagaggaactaaagggtatgttgcacccgagtggtttaggaacatggctatcactaccaaagttgatgtctatagctttggtgttgtgctgctggagatcatttgctgcaggaaaagtgttgatatggataataccagcgaagagaaagcaattttaaccgactgggtttataattgttaccaagacggacttttagatgtggttctaaatcaccaagtcaatgccttggatgacaagacagagctggaaaagactgtgatgattgctctttggtgtatccaagaagacccatttcttcgacccacgatgagaaaggttgtgcagatgcttgaaggagtagtggaagtacatgttccaccatgtccatccccatattcatcaagaacaagctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

600

Amino Acids

66.59

Weight (kDa)

5.32

Isoelectric Point (pI)

33.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000130)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43780
malus_domestica	MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica	Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis	pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis	RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata	RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora	Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii	Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa	Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha	Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana	Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1581
Acc36I	ACCTGC	1 cut(s)	95
AccI	GTMKAC	1 cut(s)	637
AccIII	TCCGGA	2 cut(s)	524, 1282
AciI	CCGC	1 cut(s)	836
AclI	AACGTT	1 cut(s)	718
AclWI	GGATC	4 cut(s)	268, 827, 956, 1355
AcsI	RAATTY	3 cut(s)	505, 865, 1250
AcuI	CTGAAG	1 cut(s)	1251
AfaI	GTAC	3 cut(s)	230, 745, 1758
AflIII	ACRYGT	1 cut(s)	1759
AgsI	TTSAA	6 cut(s)	164, 439, 551, 597, 652, 1742
AjnI	CCWGG	2 cut(s)	622, 874
AleI	CACNNNNGTG	1 cut(s)	1438
AluBI	AGCT	8 cut(s)	322, 756, 813, 1021, 1271, 1485, 1654, 1800
AluI	AGCT	8 cut(s)	322, 756, 813, 1021, 1271, 1485, 1654, 1800
Alw26I	GTCTC	2 cut(s)	425, 506
AlwI	GGATC	4 cut(s)	268, 827, 956, 1355
AlwNI	CAGNNNCTG	2 cut(s)	515, 900
Ama87I	CYCGRG	2 cut(s)	464, 1436
Aor13HI	TCCGGA	2 cut(s)	524, 1282
AoxI	GGCC	1 cut(s)	923
ApeKI	GCWGC	5 cut(s)	25, 101, 818, 1498, 1515
ApoI	RAATTY	3 cut(s)	505, 865, 1250
ArsI	GACNNNNNNTTYG	4 cut(s)	128, 160, 1461, 1493
AspLEI	GCGC	1 cut(s)	534
AspS9I	GGNCC	1 cut(s)	872
AsuC2I	CCSGG	2 cut(s)	465, 466
AsuHPI	GGTGA	3 cut(s)	146, 326, 1613
AvaI	CYCGRG	2 cut(s)	464, 1436
AvaII	GGWCC	1 cut(s)	872
AxyI	CCTNAGG	1 cut(s)	255
BaeI	ACNNNNGTAYC	2 cut(s)	880, 913
BbsI	GAAGAC	3 cut(s)	489, 1224, 1701
BbvI	GCAGC	5 cut(s)	12, 113, 805, 1485, 1502
BccI	CCATC	5 cut(s)	136, 551, 755, 934, 1783
BceAI	ACGGC	1 cut(s)	1183
BciT130I	CCWGG	2 cut(s)	624, 876
BciVI	GTATCC	3 cut(s)	235, 941, 1697
BclI	TGATCA	1 cut(s)	1330
BcnI	CCSGG	2 cut(s)	465, 466
BcoDI	GTCTC	2 cut(s)	425, 506
BfaI	CTAG	2 cut(s)	542, 1311
BfmI	CTRYAG	4 cut(s)	99, 219, 1480, 1516
BfoI	RGCGCY	1 cut(s)	535
BfuAI	ACCTGC	1 cut(s)	95
BfuI	GTATCC	3 cut(s)	235, 941, 1697
BglII	AGATCT	1 cut(s)	1036
BisI	GCNGC	5 cut(s)	26, 102, 819, 1499, 1516
BlsI	GCNGC	5 cut(s)	27, 103, 820, 1500, 1517
Bme1390I	CCNGG	4 cut(s)	465, 466, 624, 876
Bme18I	GGWCC	1 cut(s)	872
BmeT110I	CYCGRG	2 cut(s)	464, 1436
BmgT120I	GGNCC	1 cut(s)	872
BmiI	GGNNCC	1 cut(s)	873
BmrFI	CCNGG	4 cut(s)	465, 466, 624, 876
BmrI	ACTGGG	2 cut(s)	621, 1582
BmsI	GCATC	3 cut(s)	373, 961, 1725
BmuI	ACTGGG	2 cut(s)	621, 1582
BpiI	GAAGAC	3 cut(s)	489, 1224, 1701
BpmI	CTGGAG	2 cut(s)	1066, 1523
BpuEI	CTTGAG	1 cut(s)	294
BpuMI	CCSGG	2 cut(s)	465, 466
BsaBI	GATNNNNATC	1 cut(s)	561
BsaJI	CCNNGG	2 cut(s)	464, 1635
BsaWI	WCCGGW	2 cut(s)	524, 1282
Bse118I	RCCGGY	1 cut(s)	386
Bse1I	ACTGG	3 cut(s)	616, 1083, 1577
Bse21I	CCTNAGG	1 cut(s)	255
Bse3DI	GCAATG	3 cut(s)	12, 811, 1177
Bse8I	GATNNNNATC	1 cut(s)	561
BseAI	TCCGGA	2 cut(s)	524, 1282
BseBI	CCWGG	2 cut(s)	624, 876
BseDI	CCNNGG	2 cut(s)	464, 1635
BseGI	GGATG	6 cut(s)	329, 926, 1291, 1333, 1645, 1775
BseJI	GATNNNNATC	1 cut(s)	561
BseMI	GCAATG	3 cut(s)	12, 811, 1177
BseMII	CTCAG	1 cut(s)	766
BseNI	ACTGG	3 cut(s)	616, 1083, 1577
BseRI	GAGGAG	2 cut(s)	103, 498
BseXI	GCAGC	5 cut(s)	12, 113, 805, 1485, 1502
BseYI	CCCAGC	1 cut(s)	813
BsgI	GTGCAG	4 cut(s)	234, 886, 1112, 1751
BshFI	GGCC	1 cut(s)	925
BsiHKCI	CYCGRG	2 cut(s)	464, 1436
BsiSI	CCGG	5 cut(s)	387, 465, 525, 538, 1283
BslFI	GGGAC	2 cut(s)	628, 743
BsmAI	GTCTC	2 cut(s)	425, 506
BsmBI	CGTCTC	1 cut(s)	425
BsmFI	GGGAC	2 cut(s)	628, 743
BsmI	GAATGC	1 cut(s)	941
BsnI	GGCC	1 cut(s)	925
BsoBI	CYCGRG	2 cut(s)	464, 1436
Bsp13I	TCCGGA	2 cut(s)	524, 1282
Bsp143I	GATC	7 cut(s)	260, 832, 961, 1036, 1330, 1347, 1506
BspACI	CCGC	1 cut(s)	836
BspANI	GGCC	1 cut(s)	925
BspCNI	CTCAG	1 cut(s)	765
BspEI	TCCGGA	2 cut(s)	524, 1282
BspHI	TCATGA	1 cut(s)	375
BspLI	GGNNCC	1 cut(s)	873
BspMAI	CTGCAG	2 cut(s)	103, 1520
BspMI	ACCTGC	1 cut(s)	95
BspPI	GGATC	4 cut(s)	268, 827, 956, 1355
BspQI	GCTCTTC	1 cut(s)	1292
BsrDI	GCAATG	3 cut(s)	12, 811, 1177
BsrFI	RCCGGY	1 cut(s)	386
BsrI	ACTGG	3 cut(s)	616, 1083, 1577
BssAI	RCCGGY	1 cut(s)	386
BssECI	CCNNGG	2 cut(s)	464, 1635
BssMI	GATC	7 cut(s)	260, 832, 961, 1036, 1330, 1347, 1506
BssT1I	CCWWGG	1 cut(s)	1635
Bst2UI	CCWGG	2 cut(s)	624, 876
Bst4CI	ACNGT	7 cut(s)	268, 287, 495, 619, 896, 986, 1666
Bst6I	CTCTTC	2 cut(s)	1292, 1545
BstAPI	GCANNNNNTGC	1 cut(s)	86
BstC8I	GCNNGC	3 cut(s)	57, 249, 1059
BstDEI	CTNAG	4 cut(s)	255, 579, 752, 1022
BstF5I	GGATG	6 cut(s)	329, 926, 1291, 1333, 1645, 1775
BstH2I	RGCGCY	1 cut(s)	535
BstHHI	GCGC	1 cut(s)	534
BstKTI	GATC	7 cut(s)	263, 835, 964, 1039, 1333, 1350, 1509
BstMAI	GTCTC	2 cut(s)	425, 506
BstMBI	GATC	7 cut(s)	260, 832, 961, 1036, 1330, 1347, 1506
BstMWI	GCNNNNNNNGC	6 cut(s)	31, 86, 416, 538, 810, 1109
BstNI	CCWGG	2 cut(s)	624, 876
BstNSI	RCATGY	2 cut(s)	1122, 1763
BstSCI	CCNGG	4 cut(s)	463, 464, 622, 874
BstSFI	CTRYAG	4 cut(s)	99, 219, 1480, 1516
BstV1I	GCAGC	5 cut(s)	12, 113, 805, 1485, 1502
BstV2I	GAAGAC	3 cut(s)	489, 1224, 1701
BstX2I	RGATCY	3 cut(s)	832, 1036, 1347
BstYI	RGATCY	3 cut(s)	832, 1036, 1347
Bsu36I	CCTNAGG	1 cut(s)	255
BsuI	GTATCC	3 cut(s)	235, 941, 1697
BsuRI	GGCC	1 cut(s)	925
BtsCI	GGATG	6 cut(s)	329, 926, 1291, 1333, 1645, 1775
BtsI	GCAGTG	1 cut(s)	573
BtsIMutI	CAGTG	4 cut(s)	273, 292, 573, 609
BveI	ACCTGC	1 cut(s)	95
Cac8I	GCNNGC	3 cut(s)	57, 249, 1059
CaiI	CAGNNNCTG	2 cut(s)	515, 900
CciI	TCATGA	1 cut(s)	375
CfoI	GCGC	1 cut(s)	534
Cfr10I	RCCGGY	1 cut(s)	386
Cfr13I	GGNCC	1 cut(s)	872
Cfr9I	CCCGGG	1 cut(s)	464
Csp6I	GTAC	3 cut(s)	229, 744, 1757
CviAII	CATG	7 cut(s)	117, 368, 376, 1119, 1453, 1760, 1770
CviQI	GTAC	3 cut(s)	229, 744, 1757
DdeI	CTNAG	4 cut(s)	255, 579, 752, 1022
DpnI	GATC	7 cut(s)	262, 834, 963, 1038, 1332, 1349, 1508
DpnII	GATC	7 cut(s)	260, 832, 961, 1036, 1330, 1347, 1506
Eam1104I	CTCTTC	2 cut(s)	1292, 1545
EarI	CTCTTC	2 cut(s)	1292, 1545
EciI	GGCGGA	1 cut(s)	825
Eco130I	CCWWGG	1 cut(s)	1635
Eco47I	GGWCC	1 cut(s)	872
Eco57I	CTGAAG	1 cut(s)	1251
Eco81I	CCTNAGG	1 cut(s)	255
Eco88I	CYCGRG	2 cut(s)	464, 1436
EcoO109I	RGGNCCY	1 cut(s)	872
EcoRI	GAATTC	1 cut(s)	865
EcoRII	CCWGG	2 cut(s)	622, 874
EcoT14I	CCWWGG	1 cut(s)	1635
EcoT22I	ATGCAT	1 cut(s)	976
ErhI	CCWWGG	1 cut(s)	1635
Esp3I	CGTCTC	1 cut(s)	425
FaeI	CATG	7 cut(s)	120, 371, 379, 1122, 1456, 1763, 1773
FalI	AAGNNNNNCTT	4 cut(s)	1005, 1037, 1584, 1616
FaqI	GGGAC	2 cut(s)	628, 743
FatI	CATG	7 cut(s)	116, 367, 375, 1118, 1452, 1759, 1769
FauNDI	CATATG	1 cut(s)	1207
FbaI	TGATCA	1 cut(s)	1330
FblI	GTMKAC	1 cut(s)	637
Fnu4HI	GCNGC	5 cut(s)	26, 102, 819, 1499, 1516
FokI	GGATG	6 cut(s)	316, 913, 1298, 1340, 1652, 1762
Fsp4HI	GCNGC	5 cut(s)	26, 102, 819, 1499, 1516
FspBI	CTAG	2 cut(s)	542, 1311
GlaI	GCGC	1 cut(s)	533
GluI	GCNGC	5 cut(s)	26, 102, 819, 1499, 1516
GsaI	CCCAGC	1 cut(s)	817
GsuI	CTGGAG	2 cut(s)	1066, 1523
HaeII	RGCGCY	1 cut(s)	535
HaeIII	GGCC	1 cut(s)	925
HapII	CCGG	5 cut(s)	387, 465, 525, 538, 1283
HhaI	GCGC	1 cut(s)	534
Hin1II	CATG	7 cut(s)	120, 371, 379, 1122, 1456, 1763, 1773
Hin6I	GCGC	1 cut(s)	532
HinP1I	GCGC	1 cut(s)	532
HincII	GTYRAC	1 cut(s)	638
HindII	GTYRAC	1 cut(s)	638
HinfI	GANTC	5 cut(s)	442, 562, 656, 995, 1384
HpaII	CCGG	5 cut(s)	387, 465, 525, 538, 1283
HphI	GGTGA	3 cut(s)	146, 326, 1613
Hpy166II	GTNNAC	5 cut(s)	271, 573, 638, 692, 1165
Hpy188I	TCNGA	6 cut(s)	511, 832, 1347, 1354, 1377, 1389
Hpy8I	GTNNAC	5 cut(s)	271, 573, 638, 692, 1165
HpyAV	CCTTC	3 cut(s)	626, 1252, 1736
HpyCH4III	ACNGT	7 cut(s)	268, 287, 495, 619, 896, 986, 1666
HpyCH4IV	ACGT	2 cut(s)	434, 718
HpyF10VI	GCNNNNNNNGC	6 cut(s)	31, 86, 416, 538, 810, 1109
HpyF3I	CTNAG	4 cut(s)	255, 579, 752, 1022
HpySE526I	ACGT	2 cut(s)	434, 718
Hsp92II	CATG	7 cut(s)	120, 371, 379, 1122, 1456, 1763, 1773
HspAI	GCGC	1 cut(s)	532
Kpn2I	TCCGGA	2 cut(s)	524, 1282
Ksp22I	TGATCA	1 cut(s)	1330
Kzo9I	GATC	7 cut(s)	260, 832, 961, 1036, 1330, 1347, 1506
LguI	GCTCTTC	1 cut(s)	1292
Lsp1109I	GCAGC	5 cut(s)	12, 113, 805, 1485, 1502
LweI	GCATC	3 cut(s)	373, 961, 1725
MaeI	CTAG	2 cut(s)	542, 1311
MaeII	ACGT	2 cut(s)	434, 718
MaeIII	GTNAC	5 cut(s)	107, 134, 389, 887, 1586
MalI	GATC	7 cut(s)	262, 834, 963, 1038, 1332, 1349, 1508
MboI	GATC	7 cut(s)	260, 832, 961, 1036, 1330, 1347, 1506
MboII	GAAGA	9 cut(s)	489, 1025, 1151, 1229, 1306, 1309, 1562, 1697, 1706
MflI	RGATCY	3 cut(s)	832, 1036, 1347
MluCI	AATT	7 cut(s)	45, 505, 855, 865, 1250, 1560, 1582
MlyI	GAGTC	1 cut(s)	665
MmeI	TCCRAC	1 cut(s)	1163
Mph1103I	ATGCAT	1 cut(s)	976
MroI	TCCGGA	2 cut(s)	524, 1282
MseI	TTAA	4 cut(s)	858, 1097, 1230, 1565
MslI	CAYNNNNRTG	2 cut(s)	1338, 1438
MspI	CCGG	5 cut(s)	387, 465, 525, 538, 1283
MspR9I	CCNGG	4 cut(s)	465, 466, 624, 876
Mva1269I	GAATGC	1 cut(s)	941
MvaI	CCWGG	2 cut(s)	624, 876
MwoI	GCNNNNNNNGC	6 cut(s)	31, 86, 416, 538, 810, 1109
NciI	CCSGG	2 cut(s)	465, 466
NdeI	CATATG	1 cut(s)	1207
NdeII	GATC	7 cut(s)	260, 832, 961, 1036, 1330, 1347, 1506
NlaIII	CATG	7 cut(s)	120, 371, 379, 1122, 1456, 1763, 1773
NlaIV	GGNNCC	1 cut(s)	873
NmuCI	GTSAC	1 cut(s)	134
NsiI	ATGCAT	1 cut(s)	976
NspI	RCATGY	2 cut(s)	1122, 1763
OliI	CACNNNNGTG	1 cut(s)	1438
PagI	TCATGA	1 cut(s)	375
PciI	ACATGT	1 cut(s)	1759
PciSI	GCTCTTC	1 cut(s)	1292
PctI	GAATGC	1 cut(s)	941
PfeI	GAWTC	4 cut(s)	442, 562, 995, 1384
PkrI	GCNGC	5 cut(s)	27, 103, 820, 1500, 1517
PleI	GAGTC	1 cut(s)	664
PpsI	GAGTC	1 cut(s)	664
PpuMI	RGGWCCY	1 cut(s)	872
PscI	ACATGT	1 cut(s)	1759
PsiI	TTATAA	1 cut(s)	1581
Psp1406I	AACGTT	1 cut(s)	718
Psp5II	RGGWCCY	1 cut(s)	872
Psp6I	CCWGG	2 cut(s)	622, 874
PspFI	CCCAGC	1 cut(s)	813
PspGI	CCWGG	2 cut(s)	622, 874
PspN4I	GGNNCC	1 cut(s)	873
PspPI	GGNCC	1 cut(s)	872
PspPPI	RGGWCCY	1 cut(s)	872
PstI	CTGCAG	2 cut(s)	103, 1520
PstNI	CAGNNNCTG	2 cut(s)	515, 900
PsuI	RGATCY	3 cut(s)	832, 1036, 1347
RsaI	GTAC	3 cut(s)	230, 745, 1758
RsaNI	GTAC	3 cut(s)	229, 744, 1757
RseI	CAYNNNNRTG	2 cut(s)	1338, 1438
SalI	GTCGAC	1 cut(s)	636
SapI	GCTCTTC	1 cut(s)	1292
SaqAI	TTAA	4 cut(s)	858, 1097, 1230, 1565
SatI	GCNGC	5 cut(s)	26, 102, 819, 1499, 1516
Sau3AI	GATC	7 cut(s)	260, 832, 961, 1036, 1330, 1347, 1506
Sau96I	GGNCC	1 cut(s)	872
SchI	GAGTC	1 cut(s)	665
ScrFI	CCNGG	4 cut(s)	465, 466, 624, 876
SfaNI	GCATC	3 cut(s)	373, 961, 1725
SfcI	CTRYAG	4 cut(s)	99, 219, 1480, 1516
SinI	GGWCC	1 cut(s)	872
SmaI	CCCGGG	1 cut(s)	466
SmiMI	CAYNNNNRTG	2 cut(s)	1338, 1438
SmlI	CTYRAG	1 cut(s)	309
SmoI	CTYRAG	1 cut(s)	309
SrfI	GCCCGGGC	1 cut(s)	466
Sse9I	AATT	7 cut(s)	45, 505, 855, 865, 1250, 1560, 1582
SsiI	CCGC	1 cut(s)	836
SspI	AATATT	2 cut(s)	779, 844
SspMI	CTAG	2 cut(s)	542, 1311
StyD4I	CCNGG	4 cut(s)	463, 464, 622, 874
StyI	CCWWGG	1 cut(s)	1635
TaaI	ACNGT	7 cut(s)	268, 287, 495, 619, 896, 986, 1666
TaiI	ACGT	2 cut(s)	437, 721
TaqI	TCGA	4 cut(s)	502, 637, 1367, 1708
TasI	AATT	7 cut(s)	45, 505, 855, 865, 1250, 1560, 1582
TatI	WGTACW	1 cut(s)	1756
TfiI	GAWTC	4 cut(s)	442, 562, 995, 1384
Tru1I	TTAA	4 cut(s)	858, 1097, 1230, 1565
Tru9I	TTAA	4 cut(s)	858, 1097, 1230, 1565
TscAI	CASTG	4 cut(s)	273, 292, 580, 616
TseFI	GTSAC	1 cut(s)	134
TseI	GCWGC	5 cut(s)	25, 101, 818, 1498, 1515
Tsp45I	GTSAC	1 cut(s)	134
TspDTI	ATGAA	8 cut(s)	392, 581, 822, 878, 1188, 1234, 1397, 1776
TspGWI	ACGGA	2 cut(s)	731, 1611
TspMI	CCCGGG	1 cut(s)	464
TspRI	CASTG	4 cut(s)	273, 292, 580, 616
VpaK11BI	GGWCC	1 cut(s)	872
XapI	RAATTY	3 cut(s)	505, 865, 1250
XceI	RCATGY	2 cut(s)	1122, 1763
XmaI	CCCGGG	1 cut(s)	464
XmiI	GTMKAC	1 cut(s)	637
XspI	CTAG	2 cut(s)	542, 1311
Zsp2I	ATGCAT	1 cut(s)	976

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.