RchiOBHm_Chr5g0079241

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
84924088 .. 84926505
2418 bp
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UTR
Exon/CDS
Intron
PRQ35368

Sequence Viewer

Length: 2418 bp
ATGGCTTTTACTGTACGGTTGCTTCTGCTTATTTCCTCATTGTTTCTGGTTCTAGAATCTCTGTTTGCCCAGACTAATAGTGGCAAAGTAGATGTGGGAGCTTCTCTCTCTGCAACTGCAGGTAACAGCACCTCATGGCTTTCTCCTTCTGGCGATTTCGCCTTTGGTTTTCGACAACTCGAAAACAGTGATCTTTTCTTGCTTTCTACATGGTATGCCAAGATTCCAGACAGAACCATAGTTTGGTATGCAAATAATGGGGATAGTCCTGCAGCTGTAGCTAAGGGTTCACTTCTGAATTTGACTGCTGACAGTGGACTAGTGCTTACAAGTCCTCGCGGTGTTCAGCTTTGGAAATCTGAATCCATTTCTGGAGTTGTTGCCTTTGGGCTCTTGAATGATACAGGCAACTTTGTTCTTGAAGATGACAATTCAGAGAGTTTATGGGAGACCTTCAATAATCCAACTCATACCATTTTACCCGGACAGGATATCGAAAAAGGAGGGAAGCTTTGGTCTCAACAATCAGAGACCAACTTTTCGAAAGGAAGATTCCAGCTACGTATGCGAGATGATGGCGATCTTGTGCTTACCACCATAAACTTGCCATCTGAGTTTGCCAACATGCCTTACTATGCAAGTCACACTACCAGTGATTCAAATTCTTCTACTGCTGGTAGAAAGCTGGAGTTCAATAGCTCAGGCTACATGTATGTTCTGAGAGAGAACGGCGAGAAACTCACCATCAACGAAGCAGAGACAGTCTCAGCTAGGAGCTTCTATCTTAGAGCAACCCTCAACTTTGATGGGGTTTTTGCTCAATACTCTCACCCGAAAAATTCCACTGGTAATGTAAGCTGGAGTGTTGTTTGGTCAGTGCCAGAAAACATATGCGCTATGACGGTTGATTCAGGTCTTGGTGTATGTGGCTACAACAGTATCTGTACTATCCAAGATCAGAGGCCAACCTGTGCATGCCCAACAAGATACTCTTTACTGGATCCGAATGATCCGTATGGGAATTGCAAGCCGGATTTCATACAAGGCTGTGAGGAAGATGAGCTGACTGTTACAAAAGATCTATATGAAGTTCAGACGCTGAGAAATACTGATTGGCCAACCTCGGACTATATGCAGTTAAAGCCTTCTACTGCAGAGAGTTGCAATCAATCTTGCTTTGAAGACTGTTTGTGTGCTGTTGCTATTTACAGAGATGAATCCTGTTGGAAAAAGAAGTTACCTCTTTCAAATGGGAGAGTGGATAGCGGGCTTAAGTCACAGGCCTTCATCAAAGTCAAGAAGGGTAATTTAGCTCTAGTTCCTCAACCGCCAAATCCGGATGACAAGAAGAGGAAGAACCAGGCCACTTTATTACGCGTGGGATCAGCGCTTCTTGGTACCTCAATCTTTGCTAACGTTATGTTAAGTGCTATAGTTTGTATGGGATTTTTCTTCATTTACCGGAAGAAACATGTGAGGCCTAACCAAAATGTTTTGGACTCAAATCTGCGCTCTTTTAGTTATGAAGAGCTTAAAGAAGCAACAAATGGATTTAACGAAGAATTAGGAAAGGGTGCTTTTGGAGTTGTTTACAAAGGAATATTGCAAATTGGTTCTGGTGTCCCCGTGGCAGTGAAGAAGCTAAATTTTGTGGTACAAGATAGTGAGAAGGAATTCAAGACGGAACTGAGCATAATTGGTCAGACACATCACAAGAATCTAGTTAGACTTGTTGGATATTGTGATGAGGGACAAGAACGGTTACTAGTATATGAGTTCTTGAGCAATGGGACATTAGCAAACTTTCTTTTCGCTGATGCAAAACCAAGTTGGAAGCAAAGGATTGATATTGCTTATGGAGTTGCTAAAGGACTTCTGTACTTGCATGAAGAGTGCAGCACCCAGATCATCCATTGTGACATTAAGCCTCAGAACATTCTTCTAGATGATTACTACAATGCTCGGATAGCTGACTTTGGATTGGCAAAGCTTTTAATGATGAATCAGAGCCAAACTCAGACTGCCATAAGAGGAACAAAAGGGTATGTTGCACCTGAGTGGTTCAGGAACCTGCCAATCACTACCAAAGTTGATGTGTATAGCTTTGGTGTGGTGCTGCTAGAGGCCATTTGCTGCAGGAGAAGCGTTGATATGGAAAATGTTTCCGAAGAGAGAGCCATTTTAACCGATTGGGTCTATGATTGCTACCTCGAAGGAGACTTGGATGCGATTGTTGACAACGAAATGGAGGCCTTGCATGAGAAAACAAAGCTGGAAAGGTTTGTCATGGTTGCTCTATGGTGTATCCAAGAAGACCTTTCTCTTCGACCCACTATGAGGAAGGTTGTGCAGATGCTTGAAGGAGTAGTGGAAGTACATGTTCCACCATGTCCATCACCATACAGCAGAGCAGGCTGA

Protein Analysis

805

Amino Acids

89.7

Weight (kDa)

5.28

Isoelectric Point (pI)

34.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 79 - 166 1.9e-12 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 518 - 786 4.8e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 519 - 784 5.3e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 110, 2079
Acc65I GGTACC 1 cut(s) 1397
AccB1I GGYRCC 1 cut(s) 1397
AccB7I CCANNNNNTGG 1 cut(s) 243
AccII CGCG 2 cut(s) 339, 1377
AccIII TCCGGA 1 cut(s) 1336
AciI CCGC 3 cut(s) 339, 1266, 1328
AclI AACGTT 1 cut(s) 1416
AclWI GGATC 4 cut(s) 995, 1004, 1008, 1390
AcoI YGGCCR 1 cut(s) 1115
AcsI RAATTY 5 cut(s) 298, 661, 838, 1645, 1673
AfaI GTAC 6 cut(s) 15, 946, 1399, 1656, 1880, 2376
AfeI AGCGCT 1 cut(s) 1389
AfiI CCNNNNNNNGG 2 cut(s) 243, 2337
AflII CTTAAG 1 cut(s) 1271
AflIII ACRYGT 4 cut(s) 708, 1375, 1471, 2377
AgsI TTSAA 9 cut(s) 397, 422, 457, 660, 694, 1181, 1248, 1678, 2360
AhlI ACTAGT 2 cut(s) 319, 1765
AjnI CCWGG 1 cut(s) 1359
AjuI GAANNNNNNNTTGG 4 cut(s) 226, 258, 1096, 1128
AleI CACNNNNGTG 1 cut(s) 2056
Alw26I GTCTC 6 cut(s) 443, 522, 524, 752, 769, 2211
AlwI GGATC 4 cut(s) 995, 1004, 1008, 1390
AlwNI CAGNNNCTG 2 cut(s) 942, 1099
Aor13HI TCCGGA 1 cut(s) 1336
Aor51HI AGCGCT 1 cut(s) 1389
AoxI GGCC 7 cut(s) 962, 1115, 1281, 1362, 1478, 2124, 2250
ApeKI GCWGC 4 cut(s) 272, 1896, 2116, 2133
ApoI RAATTY 5 cut(s) 298, 661, 838, 1645, 1673
ArsI GACNNNNNNTTYG 2 cut(s) 523, 555
Asp700I GAANNNNTTC 1 cut(s) 1673
Asp718I GGTACC 1 cut(s) 1397
AspLEI GCGC 3 cut(s) 896, 1390, 1512
AsuC2I CCSGG 1 cut(s) 483
AsuHPI GGTGA 3 cut(s) 733, 821, 2388
AsuII TTCGAA 1 cut(s) 542
BaeI ACNNNNGTAYC 2 cut(s) 922, 955
BalI TGGCCA 1 cut(s) 1117
BamHI GGATCC 1 cut(s) 1000
BanI GGYRCC 1 cut(s) 1397
BanII GRGCYC 1 cut(s) 393
BarI GAAGNNNNNNTAC 1 cut(s) 38
BbsI GAAGAC 2 cut(s) 1188, 2319
BbvI GCAGC 4 cut(s) 284, 1908, 2103, 2120
BccI CCATC 5 cut(s) 569, 616, 752, 800, 2401
BceAI ACGGC 1 cut(s) 745
BciT130I CCWGG 1 cut(s) 1361
BciVI GTATCC 1 cut(s) 2315
BcnI CCSGG 1 cut(s) 483
BcoDI GTCTC 6 cut(s) 443, 522, 524, 752, 769, 2211
BcuI ACTAGT 2 cut(s) 319, 1765
BfaI CTAG 8 cut(s) 53, 320, 771, 1316, 1721, 1766, 1943, 2120
BfmI CTRYAG 6 cut(s) 117, 270, 276, 1152, 1431, 2134
BfoI RGCGCY 1 cut(s) 1391
BfrI CTTAAG 1 cut(s) 1271
BfuAI ACCTGC 2 cut(s) 110, 2079
BfuI GTATCC 1 cut(s) 2315
BglII AGATCT 1 cut(s) 1078
BisI GCNGC 4 cut(s) 273, 1897, 2117, 2134
BlsI GCNGC 4 cut(s) 274, 1898, 2118, 2135
Bme1390I CCNGG 2 cut(s) 483, 1361
BmiI GGNNCC 3 cut(s) 1002, 1399, 2069
BmrFI CCNGG 2 cut(s) 483, 1361
BmsI GCATC 3 cut(s) 1807, 2215, 2343
BpiI GAAGAC 2 cut(s) 1188, 2319
BplI GAGNNNNNCTC 8 cut(s) 90, 122, 749, 781, 780, 812, 1999, 2031
BpmI CTGGAG 3 cut(s) 393, 707, 880
Bpu10I CCTNAGC 2 cut(s) 282, 700
Bpu14I TTCGAA 1 cut(s) 542
BpuEI CTTGAG 1 cut(s) 1801
BpuMI CCSGG 1 cut(s) 483
BsaAI YACGTR 1 cut(s) 563
BsaBI GATNNNNATC 1 cut(s) 579
BsaI GGTCTC 3 cut(s) 443, 522, 524
BsaJI CCNNGG 2 cut(s) 1122, 1626
BsaWI WCCGGW 2 cut(s) 1336, 1461
Bsc4I CCNNNNNNNGG 2 cut(s) 243, 2337
Bse1I ACTGG 3 cut(s) 651, 850, 1002
Bse3DI GCAATG 1 cut(s) 1792
Bse8I GATNNNNATC 1 cut(s) 579
BseAI TCCGGA 1 cut(s) 1336
BseBI CCWGG 1 cut(s) 1361
BseDI CCNNGG 2 cut(s) 1122, 1626
BseGI GGATG 3 cut(s) 1345, 1908, 2230
BseJI GATNNNNATC 1 cut(s) 579
BseLI CCNNNNNNNGG 2 cut(s) 243, 2337
BseMI GCAATG 1 cut(s) 1792
BseMII CTCAG 9 cut(s) 603, 710, 714, 780, 1091, 1679, 1943, 2030, 2046
BseNI ACTGG 3 cut(s) 651, 850, 1002
BseXI GCAGC 4 cut(s) 284, 1908, 2103, 2120
BsgI GTGCAG 2 cut(s) 1915, 2369
Bsh1236I CGCG 2 cut(s) 339, 1377
BshFI GGCC 7 cut(s) 964, 1117, 1283, 1364, 1480, 2126, 2252
BshNI GGYRCC 1 cut(s) 1397
BsiSI CCGG 4 cut(s) 483, 1031, 1337, 1462
BslFI GGGAC 3 cut(s) 1607, 1764, 1804
BslI CCNNNNNNNGG 2 cut(s) 243, 2337
BsmAI GTCTC 6 cut(s) 443, 522, 524, 752, 769, 2211
BsmFI GGGAC 3 cut(s) 1607, 1764, 1804
BsnI GGCC 7 cut(s) 964, 1117, 1283, 1364, 1480, 2126, 2252
Bso31I GGTCTC 3 cut(s) 443, 522, 524
Bsp119I TTCGAA 1 cut(s) 542
Bsp1286I GDGCHC 1 cut(s) 393
Bsp13I TCCGGA 1 cut(s) 1336
Bsp143I GATC 8 cut(s) 190, 580, 955, 1000, 1009, 1078, 1382, 1905
BspACI CCGC 3 cut(s) 339, 1266, 1328
BspANI GGCC 7 cut(s) 964, 1117, 1283, 1364, 1480, 2126, 2252
BspCNI CTCAG 9 cut(s) 604, 711, 713, 779, 1092, 1680, 1942, 2029, 2047
BspEI TCCGGA 1 cut(s) 1336
BspFNI CGCG 2 cut(s) 339, 1377
BspLI GGNNCC 3 cut(s) 1002, 1399, 2069
BspMAI CTGCAG 4 cut(s) 121, 274, 1156, 2138
BspMI ACCTGC 2 cut(s) 110, 2079
BspPI GGATC 4 cut(s) 995, 1004, 1008, 1390
BspQI GCTCTTC 1 cut(s) 1521
BspT104I TTCGAA 1 cut(s) 542
BspT107I GGYRCC 1 cut(s) 1397
BspTI CTTAAG 1 cut(s) 1271
BspTNI GGTCTC 3 cut(s) 443, 522, 524
BsrDI GCAATG 1 cut(s) 1792
BsrI ACTGG 3 cut(s) 651, 850, 1002
BssECI CCNNGG 2 cut(s) 1122, 1626
BssMI GATC 8 cut(s) 190, 580, 955, 1000, 1009, 1078, 1382, 1905
Bst2UI CCWGG 1 cut(s) 1361
Bst6I CTCTTC 5 cut(s) 1343, 1521, 1884, 2163, 2328
BstAFI CTTAAG 1 cut(s) 1271
BstBAI YACGTR 1 cut(s) 563
BstBI TTCGAA 1 cut(s) 542
BstC8I GCNNGC 4 cut(s) 976, 1028, 1268, 2413
BstDSI CCRYGG 1 cut(s) 1626
BstF5I GGATG 3 cut(s) 1345, 1908, 2230
BstFNI CGCG 2 cut(s) 339, 1377
BstH2I RGCGCY 1 cut(s) 1391
BstHHI GCGC 3 cut(s) 896, 1390, 1512
BstKTI GATC 8 cut(s) 193, 583, 958, 1003, 1012, 1081, 1385, 1908
BstMAI GTCTC 6 cut(s) 443, 522, 524, 752, 769, 2211
BstMBI GATC 8 cut(s) 190, 580, 955, 1000, 1009, 1078, 1382, 1905
BstMWI GCNNNNNNNGC 6 cut(s) 278, 565, 1141, 1967, 2142, 2412
BstNI CCWGG 1 cut(s) 1361
BstNSI RCATGY 5 cut(s) 628, 712, 978, 1475, 2381
BstSCI CCNGG 2 cut(s) 481, 1359
BstSFI CTRYAG 6 cut(s) 117, 270, 276, 1152, 1431, 2134
BstSNI TACGTA 1 cut(s) 563
BstUI CGCG 2 cut(s) 339, 1377
BstV1I GCAGC 4 cut(s) 284, 1908, 2103, 2120
BstV2I GAAGAC 2 cut(s) 1188, 2319
BstX2I RGATCY 2 cut(s) 1000, 1078
BstYI RGATCY 2 cut(s) 1000, 1078
BsuI GTATCC 1 cut(s) 2315
BsuRI GGCC 7 cut(s) 964, 1117, 1283, 1364, 1480, 2126, 2252
BtgI CCRYGG 1 cut(s) 1626
BtsCI GGATG 3 cut(s) 1345, 1908, 2230
BtsI GCAGTG 1 cut(s) 1638
BtsIMutI CAGTG 6 cut(s) 193, 319, 658, 843, 882, 1638
BveI ACCTGC 2 cut(s) 110, 2079
Cac8I GCNNGC 4 cut(s) 976, 1028, 1268, 2413
CaiI CAGNNNCTG 2 cut(s) 942, 1099
CfoI GCGC 3 cut(s) 896, 1390, 1512
CseI GACGC 1 cut(s) 1105
Csp6I GTAC 6 cut(s) 14, 945, 1398, 1655, 1879, 2375
CviQI GTAC 6 cut(s) 14, 945, 1398, 1655, 1879, 2375
DpnI GATC 8 cut(s) 192, 582, 957, 1002, 1011, 1080, 1384, 1907
DpnII GATC 8 cut(s) 190, 580, 955, 1000, 1009, 1078, 1382, 1905
EaeI YGGCCR 1 cut(s) 1115
Eam1104I CTCTTC 5 cut(s) 1343, 1521, 1884, 2163, 2328
EarI CTCTTC 5 cut(s) 1343, 1521, 1884, 2163, 2328
Eco105I TACGTA 1 cut(s) 563
Eco147I AGGCCT 3 cut(s) 1283, 1480, 2252
Eco24I GRGCYC 1 cut(s) 393
Eco31I GGTCTC 3 cut(s) 443, 522, 524
Eco32I GATATC 1 cut(s) 493
Eco47III AGCGCT 1 cut(s) 1389
EcoRI GAATTC 1 cut(s) 1673
EcoRII CCWGG 1 cut(s) 1359
EcoRV GATATC 1 cut(s) 493
EcoT38I GRGCYC 1 cut(s) 393
FalI AAGNNNNNCTT 4 cut(s) 976, 1008, 2301, 2333
FaqI GGGAC 3 cut(s) 1607, 1764, 1804
FauI CCCGC 1 cut(s) 1259
FauNDI CATATG 1 cut(s) 890
Fnu4HI GCNGC 4 cut(s) 273, 1897, 2117, 2134
FokI GGATG 3 cut(s) 1352, 1895, 2237
FriOI GRGCYC 1 cut(s) 393
Fsp4HI GCNGC 4 cut(s) 273, 1897, 2117, 2134
FspBI CTAG 8 cut(s) 53, 320, 771, 1316, 1721, 1766, 1943, 2120
GlaI GCGC 3 cut(s) 895, 1389, 1511
GluI GCNGC 4 cut(s) 273, 1897, 2117, 2134
GsuI CTGGAG 3 cut(s) 393, 707, 880
HaeII RGCGCY 1 cut(s) 1391
HaeIII GGCC 7 cut(s) 964, 1117, 1283, 1364, 1480, 2126, 2252
HapII CCGG 4 cut(s) 483, 1031, 1337, 1462
HgaI GACGC 1 cut(s) 1105
HhaI GCGC 3 cut(s) 896, 1390, 1512
Hin6I GCGC 3 cut(s) 894, 1388, 1510
HinP1I GCGC 3 cut(s) 894, 1388, 1510
HincII GTYRAC 1 cut(s) 2236
HindII GTYRAC 1 cut(s) 2236
HindIII AAGCTT 2 cut(s) 509, 1988
HpaII CCGG 4 cut(s) 483, 1031, 1337, 1462
HphI GGTGA 3 cut(s) 733, 821, 2388
Hpy166II GTNNAC 4 cut(s) 290, 317, 1591, 2236
Hpy8I GTNNAC 4 cut(s) 290, 317, 1591, 2236
HpyAV CCTTC 9 cut(s) 156, 463, 1155, 1294, 1294, 1663, 2207, 2335, 2354
HpyCH4IV ACGT 2 cut(s) 562, 1416
HpyF10VI GCNNNNNNNGC 6 cut(s) 278, 565, 1141, 1967, 2142, 2412
HpySE526I ACGT 2 cut(s) 562, 1416
HspAI GCGC 3 cut(s) 894, 1388, 1510
Kpn2I TCCGGA 1 cut(s) 1336
KpnI GGTACC 1 cut(s) 1401
Kzo9I GATC 8 cut(s) 190, 580, 955, 1000, 1009, 1078, 1382, 1905
LguI GCTCTTC 1 cut(s) 1521
LmnI GCTCC 2 cut(s) 98, 774
Lsp1109I GCAGC 4 cut(s) 284, 1908, 2103, 2120
LweI GCATC 3 cut(s) 1807, 2215, 2343
MaeI CTAG 8 cut(s) 53, 320, 771, 1316, 1721, 1766, 1943, 2120
MaeII ACGT 2 cut(s) 562, 1416
MaeIII GTNAC 7 cut(s) 122, 641, 1069, 1236, 1275, 1761, 1916
MalI GATC 8 cut(s) 192, 582, 957, 1002, 1011, 1080, 1384, 1907
MboI GATC 8 cut(s) 190, 580, 955, 1000, 1009, 1078, 1382, 1905
MflI RGATCY 2 cut(s) 1000, 1078
MhlI GDGCHC 1 cut(s) 393
MlsI TGGCCA 1 cut(s) 1117
MluI ACGCGT 1 cut(s) 1375
MluNI TGGCCA 1 cut(s) 1117
MlyI GAGTC 1 cut(s) 1493
MmeI TCCRAC 4 cut(s) 488, 1205, 1714, 1811
Mox20I TGGCCA 1 cut(s) 1117
MroI TCCGGA 1 cut(s) 1336
MroXI GAANNNNTTC 1 cut(s) 1673
MscI TGGCCA 1 cut(s) 1117
MseI TTAA 8 cut(s) 1139, 1272, 1424, 1533, 1554, 1923, 1994, 2183
MslI CAYNNNNRTG 1 cut(s) 2056
Msp20I TGGCCA 1 cut(s) 1117
MspA1I CMGCKG 1 cut(s) 275
MspCI CTTAAG 1 cut(s) 1271
MspI CCGG 4 cut(s) 483, 1031, 1337, 1462
MspR9I CCNGG 2 cut(s) 483, 1361
MvaI CCWGG 1 cut(s) 1361
MvnI CGCG 2 cut(s) 339, 1377
MwoI GCNNNNNNNGC 6 cut(s) 278, 565, 1141, 1967, 2142, 2412
NciI CCSGG 1 cut(s) 483
NdeI CATATG 1 cut(s) 890
NdeII GATC 8 cut(s) 190, 580, 955, 1000, 1009, 1078, 1382, 1905
NlaIV GGNNCC 3 cut(s) 1002, 1399, 2069
NmuCI GTSAC 3 cut(s) 641, 1275, 1916
NspI RCATGY 5 cut(s) 628, 712, 978, 1475, 2381
NspV TTCGAA 1 cut(s) 542
OliI CACNNNNGTG 1 cut(s) 2056
PaeI GCATGC 1 cut(s) 978
PceI AGGCCT 3 cut(s) 1283, 1480, 2252
PciI ACATGT 3 cut(s) 708, 1471, 2377
PciSI GCTCTTC 1 cut(s) 1521
PdmI GAANNNNTTC 1 cut(s) 1673
PfeI GAWTC 9 cut(s) 56, 223, 362, 552, 656, 908, 1217, 1717, 2002
PflMI CCANNNNNTGG 1 cut(s) 243
PkrI GCNGC 4 cut(s) 274, 1898, 2118, 2135
PleI GAGTC 1 cut(s) 1493
PpsI GAGTC 1 cut(s) 1493
Ppu21I YACGTR 1 cut(s) 563
PscI ACATGT 3 cut(s) 708, 1471, 2377
Psp1406I AACGTT 1 cut(s) 1416
Psp6I CCWGG 1 cut(s) 1359
PspGI CCWGG 1 cut(s) 1359
PspN4I GGNNCC 3 cut(s) 1002, 1399, 2069
PstI CTGCAG 4 cut(s) 121, 274, 1156, 2138
PstNI CAGNNNCTG 2 cut(s) 942, 1099
PsuI RGATCY 2 cut(s) 1000, 1078
PvuII CAGCTG 1 cut(s) 275
RsaI GTAC 6 cut(s) 15, 946, 1399, 1656, 1880, 2376
RsaNI GTAC 6 cut(s) 14, 945, 1398, 1655, 1879, 2375
RseI CAYNNNNRTG 1 cut(s) 2056
SapI GCTCTTC 1 cut(s) 1521
SaqAI TTAA 8 cut(s) 1139, 1272, 1424, 1533, 1554, 1923, 1994, 2183
SatI GCNGC 4 cut(s) 273, 1897, 2117, 2134
Sau3AI GATC 8 cut(s) 190, 580, 955, 1000, 1009, 1078, 1382, 1905
SchI GAGTC 1 cut(s) 1493
ScrFI CCNGG 2 cut(s) 483, 1361
SduI GDGCHC 1 cut(s) 393
SfaNI GCATC 3 cut(s) 1807, 2215, 2343
SfcI CTRYAG 6 cut(s) 117, 270, 276, 1152, 1431, 2134
SfuI TTCGAA 1 cut(s) 542
SmiMI CAYNNNNRTG 1 cut(s) 2056
SmlI CTYRAG 2 cut(s) 1271, 1780
SmoI CTYRAG 2 cut(s) 1271, 1780
SnaBI TACGTA 1 cut(s) 563
SpeI ACTAGT 2 cut(s) 319, 1765
SphI GCATGC 1 cut(s) 978
SseBI AGGCCT 3 cut(s) 1283, 1480, 2252
SsiI CCGC 3 cut(s) 339, 1266, 1328
SspI AATATT 1 cut(s) 1602
SspMI CTAG 8 cut(s) 53, 320, 771, 1316, 1721, 1766, 1943, 2120
StuI AGGCCT 3 cut(s) 1283, 1480, 2252
StyD4I CCNGG 2 cut(s) 481, 1359
TaiI ACGT 2 cut(s) 565, 1419
TaqI TCGA 6 cut(s) 172, 180, 495, 542, 2211, 2326
TatI WGTACW 3 cut(s) 944, 1878, 2374
TfiI GAWTC 9 cut(s) 56, 223, 362, 552, 656, 908, 1217, 1717, 2002
Tru1I TTAA 8 cut(s) 1139, 1272, 1424, 1533, 1554, 1923, 1994, 2183
Tru9I TTAA 8 cut(s) 1139, 1272, 1424, 1533, 1554, 1923, 1994, 2183
TscAI CASTG 6 cut(s) 193, 319, 658, 850, 882, 1638
TseFI GTSAC 3 cut(s) 641, 1275, 1916
TseI GCWGC 4 cut(s) 272, 1896, 2116, 2133
Tsp45I GTSAC 3 cut(s) 641, 1275, 1916
TspDTI ATGAA 8 cut(s) 1027, 1101, 1230, 1276, 1444, 1539, 1902, 2015
TspGWI ACGGA 2 cut(s) 1002, 1697
TspRI CASTG 6 cut(s) 193, 319, 658, 850, 882, 1638
Van91I CCANNNNNTGG 1 cut(s) 243
Vha464I CTTAAG 1 cut(s) 1271
XapI RAATTY 5 cut(s) 298, 661, 838, 1645, 1673
XbaI TCTAGA 2 cut(s) 52, 1942
XceI RCATGY 5 cut(s) 628, 712, 978, 1475, 2381
XcmI CCANNNNNNNNNTGG 1 cut(s) 77
XmnI GAANNNNTTC 1 cut(s) 1673
XspI CTAG 8 cut(s) 53, 320, 771, 1316, 1721, 1766, 1943, 2120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.