MD03G1020300.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
1568802 .. 1569616
815 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1020300.v1.1.491

Sequence Viewer

Length: 720 bp
ATGCAAATTTATTCTGGTGTCGAATTAGTGGCGGTGAAGAAGCTAAACTATGTACAGCATGACATTGAGAAGGAATTTATGACAGAATTGAAGGCACTTGGTCAGACACACCGCAAGAATCTAATTCACCTTTTCGGATATTGTGATGAGGGGCAACACAGCTTACTAGTTTATGAATTCTTGAGCAATGGCCCATTAGCAAGCTTTGTTTTCGCTGACGTGAAACCGAGTTGGAGACAGCGAATTGAAATTGCTCATGGAGTTGCTAGAAACTCTGATTTTGGATTGGCAATTTTGACGATGAATCAGCACCAGATTCATACTGCCATTCGAGGAACAAAAGGTTATGTTGCAACTGAGTGGTTTCATATGTTGCCAATCACTACCAAAGTTGACGTGTGCAGCTTCGGCGTTGTACTGCTAGAGATCATTTTTTGCAAGAGAAGCGTTGATGTGGAAAATAACTGCAAAGAGAAAGCAAATTTCAGAGATTGGGTGTACAATTGCTACGTTAATGGAGAACTACATGTTGTAGTAGATTATGAACCCCGGACCTTTCTTGAACGATGGAAACTGCAAATTTTCGTGACGGCTGCATTTTGGTGCATTCAAGAAGACCCGTCTCTTAGGCCTACTATGAGGAAGGTTGTGCAGATGCTTGAAGGAAAAGTGGAAGTACATGTTCCACCGTATCCATTCCCATATACCAGAACTGGTTAA

Protein Analysis

240

Amino Acids

27.72

Weight (kDa)

7.14

Isoelectric Point (pI)

22.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 9 - 89 1.7e-09 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 70 - 218 1.9e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 88 - 220 1.3e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 32, 112
AcsI RAATTY 5 cut(s) 6, 74, 176, 481, 579
AfaI GTAC 4 cut(s) 54, 417, 500, 678
AflIII ACRYGT 3 cut(s) 396, 526, 679
AgsI TTSAA 5 cut(s) 91, 248, 563, 611, 662
AhlI ACTAGT 1 cut(s) 166
AjiI CACGTC 2 cut(s) 220, 397
AluBI AGCT 4 cut(s) 43, 162, 204, 405
AluI AGCT 4 cut(s) 43, 162, 204, 405
Alw26I GTCTC 2 cut(s) 229, 627
AoxI GGCC 2 cut(s) 190, 629
ApeKI GCWGC 2 cut(s) 402, 593
ApoI RAATTY 5 cut(s) 6, 74, 176, 481, 579
AspS9I GGNCC 2 cut(s) 191, 552
AsuC2I CCSGG 1 cut(s) 550
AsuHPI GGTGA 2 cut(s) 46, 119
AvaII GGWCC 1 cut(s) 552
BbsI GAAGAC 1 cut(s) 621
BbvI GCAGC 2 cut(s) 414, 580
BccI CCATC 1 cut(s) 561
BceAI ACGGC 1 cut(s) 606
BciVI GTATCC 1 cut(s) 702
BcnI CCSGG 1 cut(s) 550
BcoDI GTCTC 2 cut(s) 229, 627
BcuI ACTAGT 1 cut(s) 166
BfaI CTAG 3 cut(s) 167, 267, 422
BfuI GTATCC 1 cut(s) 702
BisI GCNGC 2 cut(s) 403, 594
BlsI GCNGC 2 cut(s) 404, 595
Bme1390I CCNGG 1 cut(s) 550
Bme18I GGWCC 1 cut(s) 552
BmgBI CACGTC 2 cut(s) 220, 397
BmgT120I GGNCC 2 cut(s) 191, 552
BmrFI CCNGG 1 cut(s) 550
BmsI GCATC 1 cut(s) 645
BpiI GAAGAC 1 cut(s) 621
BpuEI CTTGAG 1 cut(s) 202
BpuMI CCSGG 1 cut(s) 550
BsaJI CCNNGG 1 cut(s) 548
Bse1I ACTGG 1 cut(s) 718
Bse3DI GCAATG 1 cut(s) 193
BseDI CCNNGG 1 cut(s) 548
BseMI GCAATG 1 cut(s) 193
BseMII CTCAG 1 cut(s) 348
BseNI ACTGG 1 cut(s) 718
BseXI GCAGC 2 cut(s) 414, 580
BsgI GTGCAG 2 cut(s) 421, 671
BshFI GGCC 2 cut(s) 192, 631
BsiSI CCGG 1 cut(s) 550
BsmAI GTCTC 2 cut(s) 229, 627
BsmBI CGTCTC 1 cut(s) 627
BsmI GAATGC 1 cut(s) 606
BsnI GGCC 2 cut(s) 192, 631
Bsp1407I TGTACA 2 cut(s) 52, 498
Bsp143I GATC 1 cut(s) 426
BspACI CCGC 2 cut(s) 32, 112
BspANI GGCC 2 cut(s) 192, 631
BspCNI CTCAG 1 cut(s) 349
BsrDI GCAATG 1 cut(s) 193
BsrGI TGTACA 2 cut(s) 52, 498
BsrI ACTGG 1 cut(s) 718
BssECI CCNNGG 1 cut(s) 548
BssMI GATC 1 cut(s) 426
Bst4CI ACNGT 1 cut(s) 690
BstAUI TGTACA 2 cut(s) 52, 498
BstC8I GCNNGC 1 cut(s) 202
BstDEI CTNAG 2 cut(s) 357, 626
BstKTI GATC 1 cut(s) 429
BstMAI GTCTC 2 cut(s) 229, 627
BstMBI GATC 1 cut(s) 426
BstMWI GCNNNNNNNGC 2 cut(s) 408, 444
BstNSI RCATGY 2 cut(s) 530, 683
BstSCI CCNGG 1 cut(s) 548
BstV1I GCAGC 2 cut(s) 414, 580
BstV2I GAAGAC 1 cut(s) 621
BsuI GTATCC 1 cut(s) 702
BsuRI GGCC 2 cut(s) 192, 631
BtrI CACGTC 2 cut(s) 220, 397
Cac8I GCNNGC 1 cut(s) 202
Cfr13I GGNCC 2 cut(s) 191, 552
Csp6I GTAC 4 cut(s) 53, 416, 499, 677
CviAII CATG 4 cut(s) 59, 257, 527, 680
CviJI RGCY 7 cut(s) 43, 162, 192, 204, 405, 593, 631
CviKI_1 RGCY 7 cut(s) 43, 162, 192, 204, 405, 593, 631
CviQI GTAC 4 cut(s) 53, 416, 499, 677
DdeI CTNAG 2 cut(s) 357, 626
DpnI GATC 1 cut(s) 428
DpnII GATC 1 cut(s) 426
Eco147I AGGCCT 1 cut(s) 631
Eco47I GGWCC 1 cut(s) 552
EcoRI GAATTC 1 cut(s) 176
Esp3I CGTCTC 1 cut(s) 627
FaeI CATG 4 cut(s) 62, 260, 530, 683
FatI CATG 4 cut(s) 58, 256, 526, 679
FauNDI CATATG 1 cut(s) 369
Fnu4HI GCNGC 2 cut(s) 403, 594
Fsp4HI GCNGC 2 cut(s) 403, 594
FspBI CTAG 3 cut(s) 167, 267, 422
GluI GCNGC 2 cut(s) 403, 594
HaeIII GGCC 2 cut(s) 192, 631
HapII CCGG 1 cut(s) 550
Hin1II CATG 4 cut(s) 62, 260, 530, 683
HincII GTYRAC 1 cut(s) 394
HindII GTYRAC 1 cut(s) 394
HindIII AAGCTT 1 cut(s) 202
HinfI GANTC 3 cut(s) 118, 304, 316
HpaII CCGG 1 cut(s) 550
HphI GGTGA 2 cut(s) 46, 119
Hpy166II GTNNAC 2 cut(s) 394, 499
Hpy188I TCNGA 4 cut(s) 105, 137, 277, 488
Hpy188III TCNNGA 4 cut(s) 181, 560, 586, 611
Hpy8I GTNNAC 2 cut(s) 394, 499
HpyAV CCTTC 4 cut(s) 64, 85, 637, 656
HpyCH4III ACNGT 1 cut(s) 690
HpyCH4IV ACGT 3 cut(s) 219, 396, 510
HpyCH4V TGCA 9 cut(s) 4, 353, 402, 438, 468, 577, 596, 606, 652
HpyF10VI GCNNNNNNNGC 2 cut(s) 408, 444
HpyF3I CTNAG 2 cut(s) 357, 626
HpySE526I ACGT 3 cut(s) 219, 396, 510
Hsp92II CATG 4 cut(s) 62, 260, 530, 683
Kzo9I GATC 1 cut(s) 426
LpnPI CCDG 3 cut(s) 326, 563, 699
Lsp1109I GCAGC 2 cut(s) 414, 580
LweI GCATC 1 cut(s) 645
MaeI CTAG 3 cut(s) 167, 267, 422
MaeII ACGT 3 cut(s) 219, 396, 510
MaeIII GTNAC 1 cut(s) 586
MalI GATC 1 cut(s) 428
MboI GATC 1 cut(s) 426
MboII GAAGA 2 cut(s) 49, 626
MfeI CAATTG 1 cut(s) 502
MmeI TCCRAC 1 cut(s) 212
MnlI CCTC 3 cut(s) 142, 326, 633
MseI TTAA 2 cut(s) 513, 718
MslI CAYNNNNRTG 1 cut(s) 601
MspI CCGG 1 cut(s) 550
MspR9I CCNGG 1 cut(s) 550
MunI CAATTG 1 cut(s) 502
Mva1269I GAATGC 1 cut(s) 606
MwoI GCNNNNNNNGC 2 cut(s) 408, 444
NciI CCSGG 1 cut(s) 550
NdeI CATATG 1 cut(s) 369
NdeII GATC 1 cut(s) 426
NlaIII CATG 4 cut(s) 62, 260, 530, 683
NmuCI GTSAC 1 cut(s) 586
NspI RCATGY 2 cut(s) 530, 683
PceI AGGCCT 1 cut(s) 631
PciI ACATGT 2 cut(s) 526, 679
PctI GAATGC 1 cut(s) 606
PfeI GAWTC 3 cut(s) 118, 304, 316
PkrI GCNGC 2 cut(s) 404, 595
PscI ACATGT 2 cut(s) 526, 679
PspPI GGNCC 2 cut(s) 191, 552
RsaI GTAC 4 cut(s) 54, 417, 500, 678
RsaNI GTAC 4 cut(s) 53, 416, 499, 677
RseI CAYNNNNRTG 1 cut(s) 601
SaqAI TTAA 2 cut(s) 513, 718
SatI GCNGC 2 cut(s) 403, 594
Sau3AI GATC 1 cut(s) 426
Sau96I GGNCC 2 cut(s) 191, 552
ScrFI CCNGG 1 cut(s) 550
SfaNI GCATC 1 cut(s) 645
SinI GGWCC 1 cut(s) 552
SmiMI CAYNNNNRTG 1 cut(s) 601
SmlI CTYRAG 1 cut(s) 181
SmoI CTYRAG 1 cut(s) 181
SpeI ACTAGT 1 cut(s) 166
SseBI AGGCCT 1 cut(s) 631
SsiI CCGC 2 cut(s) 32, 112
SspMI CTAG 3 cut(s) 167, 267, 422
StuI AGGCCT 1 cut(s) 631
StyD4I CCNGG 1 cut(s) 548
TaaI ACNGT 1 cut(s) 690
TaiI ACGT 3 cut(s) 222, 399, 513
TaqI TCGA 2 cut(s) 21, 331
TatI WGTACW 4 cut(s) 52, 415, 498, 676
TfiI GAWTC 3 cut(s) 118, 304, 316
Tru1I TTAA 2 cut(s) 513, 718
Tru9I TTAA 2 cut(s) 513, 718
TseFI GTSAC 1 cut(s) 586
TseI GCWGC 2 cut(s) 402, 593
Tsp45I GTSAC 1 cut(s) 586
TspDTI ATGAA 5 cut(s) 189, 308, 317, 356, 558
VpaK11BI GGWCC 1 cut(s) 552
XapI RAATTY 5 cut(s) 6, 74, 176, 481, 579
XceI RCATGY 2 cut(s) 530, 683
XspI CTAG 3 cut(s) 167, 267, 422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.