Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0000130

Physical Location & Seq

Genomic Coordinates Reverse (-)

36046248 .. 36049611

Gene Structure 3364 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1226800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGGTGCTTTTGCAATGGCAGTGGCTCTTTCTGTGGAGATGCTTTTGTTCTCCTCTTTGTTTTTGCTACCAATTTCTGTGATTTCCCAAAATAATGGAAGAGTAGCAGTTGGGAGTTCTCTAACTGCAACTACAGGCGACTCCTCATCATGGCTTTCTCCATCCGGTGATTTCGCGTTTGGATTTTCGCCCCTCGGAAACAATGATCGTTTCTTGCTTTCGATATGGTATGCGAAAATCCCAGACAAAACCGTAGTTTGGTATGCATATGACGGTAACAACCCCATGGTTGCACCTGGGGGATCAGTTCTGAACTTGACTGCCAACAGTGGACTAGTTCTTAACAATCCTCAGGGTGGAGAGATATGGAAATCCGAAATAACCTTGGGGACTGTTGCGAACGGGGTCATGAATGACACCGGAAACTTTGTCCTTCAACACCAAAACTCGGGGAGCTTGTGGGAGACCTTCAGCAGTCCTACAGACACCGTTTTGCCTGGACAGACAATTGAGAGAAACGGGACGCTTTCGTGTAGACAATCGGAGACTAACTACACAAAAGGGCGGTTCCAGCTGAGCTTGCAAGGTGATGGAAACCTCGTGCTCATTTCCGTCACAACAGATAATGCCAACATCCCTTACTTCTCCACGAAGACCACCTCAGGGAACGTGCCAGGTAGTCAAGGCAAACGATTGGTGTTCAGCAGCTCAGGGGACATGTTTGTTCTAAGAGAAAATGATGGAAGAGTTCCTCTTAAGGGGACAGAGGGAGTGTCGGTGAGGGACAACTACATAAGGGCAACTCTTGATTTTGATGGGATTTTCGCTTTATATTCTCACCCGAAAAACTTCACGGGAAATGCAAGTTGGATTAGTCCTCTGGTGTATATGCCGGATGATATTTGCCTACGACTGGGCGTTGGTGTTTGCGGTTACAACAGTACCTGTATGCTCAAACCAGATAAAAGGCCAACCTGCGAATGCCCAAAAGGGTTTTCTTTTCTTGATCCGAAGGATATATACCGAGGCTGCAAACCCGATTTGAGCCGGAAATCTGTGACACGCGTGGAATCAGTATTATTAGATAAATGGGTTTGGATTGGCATTTCTATAGCTGCTGCTCTAGTGCTTTGCACCGCGTACTATCTACTCCGACGAAGAAGATCAGCCCTTGCATCAGCTGGTGAGAACTGGCCAGAGATTGAGAACGAAATGCTTATCTTCATGAAATCTAAGCGACATCATGATTTTAGCGTTTTTAGCTATTCATCCATCGTGGCTGCCACAAGAAACTTCGCTGAAGAAAACAAGCTAGGACAAGGAGGGTTTGGACCGGTTTATAAGGGGAAATTGGCGACGGGACAAGAAATAGCTGTGAAGAGGCTTTCGAAATGTTCAGGGCAAGGAACATCAGAATTCAAGAATGAACTGATACTTATATATGAACTCAAACATACAAACCTGGTTCACCTTTTCGGATTTTGCATTCATGGTGAAGAAATGATGTTGATATATGAGTATCTGCAGAACAAAAGTTTGGACCACTTTTTATTTGATCCAATCAGAGGTCTACTACTAGATTGGAAGAAGCGTTTTAGCATTCTCGAAGGAATTGCTCAAGGGTTGCTTTATCTGCACAAATACTCAAGAAAGAAAGTAATTCATAGAGATGTAAAAGCTAGTAACATACTACTTGATGAAAACATGAACCCAAAAATTTCAGATTTTGGTATGGCAAGGATTTTCACCCAAAATGAATTGGAAGCAAACACTAGAAAGGTTGTGGGGACACTTGGTTACATGCCTCCAGAGTCCGTGGGGGGAATTATTTCTGTAAAGTCTGATGTCTACAGTTTCGGGGTATTGATGCTTGAAATCATAAGTGGAAGGAAAAACAACAGCTTTTACAATGACGATCGCGCACTCAATTTAGTAGGATATGCATGGGAGTTATGGAAAAAAGGTGCAGGGCTAGAATTAACGGATCCAACATTAGGAAATTCGTTTATTAAAGAGCAACTGTTAAGATGCATCCATGTCGGTCTGCTTTGCGTAGAAGAAAATGCAGCAGATCGCCCTACCATGTCAGATGTCATATCTATGTTGACAAATGAAAGCTTTCGATTAGCATCACCAACAAAGCCAGCATTTTTTGTTGGAAGGAGGACGGTGGAGGCTGGTATAAGTGGGAATCAGCAACTTGAAACTGTTGCTTCAGCAAACTACATGTCCAGTTCAGATTTTGAAGCGCGAGGTTATGCATCAACTGGAGTTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

760

Amino Acids

83.6

Weight (kDa)

7.86

Isoelectric Point (pI)

36.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	84 - 175	1.7e-12	D-mannose binding lectin
Pkinase	PF00069	433 - 634	1e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	435 - 643	4.8e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000130)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43780
malus_domestica	MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica	Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis	pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis	RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata	RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora	Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii	Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa	Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha	Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana	Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1341
Acc36I	ACCTGC	1 cut(s)	983
AccI	GTMKAC	3 cut(s)	535, 1570, 1848
AccII	CGCG	5 cut(s)	176, 1065, 1139, 1920, 2251
AciI	CCGC	3 cut(s)	565, 930, 1137
AclWI	GGATC	5 cut(s)	310, 1001, 1550, 1979, 1992
AcoI	YGGCCR	1 cut(s)	1193
AcsI	RAATTY	3 cut(s)	1415, 1716, 1999
AcuI	CTGAAG	3 cut(s)	454, 1320, 2199
AfaI	GTAC	2 cut(s)	943, 1142
AfiI	CCNNNNNNNGG	9 cut(s)	150, 258, 356, 448, 663, 758, 913, 1565, 1994
AflII	CTTAAG	1 cut(s)	755
AflIII	ACRYGT	3 cut(s)	717, 1063, 2226
AgeI	ACCGGT	1 cut(s)	1333
AgsI	TTSAA	5 cut(s)	437, 1420, 1874, 2204, 2246
AhlI	ACTAGT	1 cut(s)	334
AjnI	CCWGG	4 cut(s)	295, 496, 673, 1461
AjuI	GAANNNNNNNTTGG	6 cut(s)	850, 882, 979, 1011, 1520, 1552
Alw21I	GWGCWC	1 cut(s)	606
Alw26I	GTCTC	2 cut(s)	458, 539
AlwI	GGATC	5 cut(s)	310, 1001, 1550, 1979, 1992
AlwNI	CAGNNNCTG	1 cut(s)	945
Ama87I	CYCGRG	1 cut(s)	448
AoxI	GGCC	2 cut(s)	968, 1193
ApeKI	GCWGC	6 cut(s)	705, 1029, 1115, 1118, 1280, 2066
ApoI	RAATTY	3 cut(s)	1415, 1716, 1999
ArsI	GACNNNNNNTTYG	2 cut(s)	2213, 2245
AsiGI	ACCGGT	1 cut(s)	1333
Asp700I	GAANNNNTTC	3 cut(s)	848, 1828, 2118
AspLEI	GCGC	2 cut(s)	1922, 2251
AspS9I	GGNCC	2 cut(s)	1331, 1540
AsuHPI	GGTGA	9 cut(s)	179, 599, 790, 830, 1196, 1460, 1505, 1738, 2124
AsuII	TTCGAA	1 cut(s)	1388
AvaI	CYCGRG	1 cut(s)	448
AvaII	GGWCC	2 cut(s)	1331, 1540
AxyI	CCTNAGG	2 cut(s)	351, 661
BaeI	ACNNNNGTAYC	2 cut(s)	925, 958
BalI	TGGCCA	1 cut(s)	1195
BamHI	GGATCC	1 cut(s)	1984
BarI	GAAGNNNNNNTAC	2 cut(s)	1004, 1036
BauI	CACGAG	1 cut(s)	599
BbsI	GAAGAC	1 cut(s)	659
Bbv12I	GWGCWC	1 cut(s)	606
BbvI	GCAGC	6 cut(s)	717, 1016, 1102, 1105, 1267, 2078
BccI	CCATC	5 cut(s)	169, 584, 734, 809, 1280
BcgI	CGANNNNNNTGC	4 cut(s)	1595, 1629, 2020, 2054
BciT130I	CCWGG	4 cut(s)	297, 498, 675, 1463
BcoDI	GTCTC	2 cut(s)	458, 539
BcuI	ACTAGT	1 cut(s)	334
BfaI	CTAG	7 cut(s)	335, 1124, 1313, 1577, 1680, 1773, 1973
BfmI	CTRYAG	5 cut(s)	132, 480, 1110, 1523, 1849
BfrI	CTTAAG	1 cut(s)	755
BfuAI	ACCTGC	1 cut(s)	983
BisI	GCNGC	6 cut(s)	706, 1030, 1116, 1119, 1281, 2067
BlpI	GCTNAGC	1 cut(s)	575
BlsI	GCNGC	6 cut(s)	707, 1031, 1117, 1120, 1282, 2068
Bme1390I	CCNGG	4 cut(s)	297, 498, 675, 1463
Bme18I	GGWCC	2 cut(s)	1331, 1540
BmeT110I	CYCGRG	1 cut(s)	448
BmgT120I	GGNCC	2 cut(s)	1331, 1540
BmiI	GGNNCC	2 cut(s)	569, 1986
BmrFI	CCNGG	4 cut(s)	297, 498, 675, 1463
BmrI	ACTGGG	1 cut(s)	923
BmsI	GCATC	7 cut(s)	30, 1184, 1857, 2018, 2040, 2138, 2270
BmuI	ACTGGG	1 cut(s)	923
BpiI	GAAGAC	1 cut(s)	659
BpmI	CTGGAG	1 cut(s)	1791
Bpu10I	CCTNAGC	1 cut(s)	709
Bpu1102I	GCTNAGC	1 cut(s)	575
Bpu14I	TTCGAA	1 cut(s)	1388
BpuEI	CTTGAG	2 cut(s)	1602, 1630
BsaBI	GATNNNNATC	1 cut(s)	2128
BsaI	GGTCTC	1 cut(s)	458
BsaJI	CCNNGG	6 cut(s)	193, 285, 296, 384, 1024, 1815
BsaWI	WCCGGW	3 cut(s)	164, 419, 1333
BsaXI	ACNNNNNCTCC	2 cut(s)	762, 792
Bsc4I	CCNNNNNNNGG	9 cut(s)	150, 258, 356, 448, 663, 758, 913, 1565, 1994
Bse118I	RCCGGY	1 cut(s)	1333
Bse1I	ACTGG	4 cut(s)	918, 1196, 2232, 2272
Bse21I	CCTNAGG	2 cut(s)	351, 661
Bse3DI	GCAATG	1 cut(s)	21
Bse8I	GATNNNNATC	1 cut(s)	2128
BseBI	CCWGG	4 cut(s)	297, 498, 675, 1463
BseDI	CCNNGG	6 cut(s)	193, 285, 296, 384, 1024, 1815
BseGI	GGATG	5 cut(s)	161, 633, 901, 1268, 2031
BseJI	GATNNNNATC	1 cut(s)	2128
BseLI	CCNNNNNNNGG	9 cut(s)	150, 258, 356, 448, 663, 758, 913, 1565, 1994
BseMI	GCAATG	1 cut(s)	21
BseMII	CTCAG	4 cut(s)	365, 566, 675, 723
BseNI	ACTGG	4 cut(s)	918, 1196, 2232, 2272
BseRI	GAGGAG	2 cut(s)	43, 133
BseXI	GCAGC	6 cut(s)	717, 1016, 1102, 1105, 1267, 2078
BsgI	GTGCAG	2 cut(s)	1619, 1986
Bsh1236I	CGCG	5 cut(s)	176, 1065, 1139, 1920, 2251
Bsh1285I	CGRYCG	1 cut(s)	1918
BshFI	GGCC	2 cut(s)	970, 1195
BshTI	ACCGGT	1 cut(s)	1333
BsiEI	CGRYCG	1 cut(s)	1918
BsiHKAI	GWGCWC	1 cut(s)	606
BsiHKCI	CYCGRG	1 cut(s)	448
BsiSI	CCGG	5 cut(s)	165, 420, 893, 1048, 1334
BslFI	GGGAC	7 cut(s)	403, 535, 728, 775, 797, 1374, 1801
BslI	CCNNNNNNNGG	9 cut(s)	150, 258, 356, 448, 663, 758, 913, 1565, 1994
BsmAI	GTCTC	2 cut(s)	458, 539
BsmFI	GGGAC	7 cut(s)	403, 535, 728, 775, 797, 1374, 1801
BsmI	GAATGC	3 cut(s)	986, 1485, 1599
BsnI	GGCC	2 cut(s)	970, 1195
Bso31I	GGTCTC	1 cut(s)	458
BsoBI	CYCGRG	1 cut(s)	448
Bsp119I	TTCGAA	1 cut(s)	1388
Bsp1286I	GDGCHC	1 cut(s)	606
Bsp143I	GATC	8 cut(s)	205, 302, 1006, 1163, 1555, 1915, 1984, 2071
Bsp1720I	GCTNAGC	1 cut(s)	575
Bsp19I	CCATGG	1 cut(s)	285
BspACI	CCGC	3 cut(s)	565, 930, 1137
BspANI	GGCC	2 cut(s)	970, 1195
BspCNI	CTCAG	4 cut(s)	364, 567, 674, 722
BspFNI	CGCG	5 cut(s)	176, 1065, 1139, 1920, 2251
BspHI	TCATGA	3 cut(s)	408, 1224, 1243
BspLI	GGNNCC	2 cut(s)	569, 1986
BspMAI	CTGCAG	1 cut(s)	1527
BspMI	ACCTGC	1 cut(s)	983
BspPI	GGATC	5 cut(s)	310, 1001, 1550, 1979, 1992
BspT104I	TTCGAA	1 cut(s)	1388
BspTI	CTTAAG	1 cut(s)	755
BspTNI	GGTCTC	1 cut(s)	458
BsrDI	GCAATG	1 cut(s)	21
BsrFI	RCCGGY	1 cut(s)	1333
BsrI	ACTGG	4 cut(s)	918, 1196, 2232, 2272
BssAI	RCCGGY	1 cut(s)	1333
BssECI	CCNNGG	6 cut(s)	193, 285, 296, 384, 1024, 1815
BssMI	GATC	8 cut(s)	205, 302, 1006, 1163, 1555, 1915, 1984, 2071
BssSI	CACGAG	1 cut(s)	599
BssT1I	CCWWGG	2 cut(s)	285, 384
Bst2BI	CACGAG	1 cut(s)	599
Bst2UI	CCWGG	4 cut(s)	297, 498, 675, 1463
Bst6I	CTCTTC	3 cut(s)	94, 739, 1373
BstAFI	CTTAAG	1 cut(s)	755
BstBI	TTCGAA	1 cut(s)	1388
BstC8I	GCNNGC	2 cut(s)	581, 2145
BstDEI	CTNAG	6 cut(s)	351, 575, 661, 709, 728, 1233
BstDSI	CCRYGG	2 cut(s)	285, 1815
BstF5I	GGATG	5 cut(s)	161, 633, 901, 1268, 2031
BstFNI	CGCG	5 cut(s)	176, 1065, 1139, 1920, 2251
BstHHI	GCGC	2 cut(s)	1922, 2251
BstKTI	GATC	8 cut(s)	208, 305, 1009, 1166, 1558, 1918, 1987, 2074
BstMAI	GTCTC	2 cut(s)	458, 539
BstMBI	GATC	8 cut(s)	205, 302, 1006, 1163, 1555, 1915, 1984, 2071
BstMCI	CGRYCG	1 cut(s)	1918
BstMWI	GCNNNNNNNGC	4 cut(s)	571, 580, 1260, 1633
BstNI	CCWGG	4 cut(s)	297, 498, 675, 1463
BstNSI	RCATGY	3 cut(s)	721, 1804, 2230
BstSCI	CCNGG	4 cut(s)	295, 496, 673, 1461
BstSFI	CTRYAG	5 cut(s)	132, 480, 1110, 1523, 1849
BstUI	CGCG	5 cut(s)	176, 1065, 1139, 1920, 2251
BstV1I	GCAGC	6 cut(s)	717, 1016, 1102, 1105, 1267, 2078
BstV2I	GAAGAC	1 cut(s)	659
BstX2I	RGATCY	1 cut(s)	1984
BstXI	CCANNNNNNTGG	1 cut(s)	95
BstYI	RGATCY	1 cut(s)	1984
Bsu36I	CCTNAGG	2 cut(s)	351, 661
BsuRI	GGCC	2 cut(s)	970, 1195
BtgI	CCRYGG	2 cut(s)	285, 1815
BtsCI	GGATG	5 cut(s)	161, 633, 901, 1268, 2031
BtsI	GCAGTG	1 cut(s)	27
BtsIMutI	CAGTG	2 cut(s)	27, 334
BveI	ACCTGC	1 cut(s)	983
Cac8I	GCNNGC	2 cut(s)	581, 2145
CaiI	CAGNNNCTG	1 cut(s)	945
CciI	TCATGA	3 cut(s)	408, 1224, 1243
CfoI	GCGC	2 cut(s)	1922, 2251
Cfr10I	RCCGGY	1 cut(s)	1333
Cfr13I	GGNCC	2 cut(s)	1331, 1540
CseI	GACGC	1 cut(s)	532
CsiI	ACCWGGT	1 cut(s)	1461
Csp6I	GTAC	2 cut(s)	942, 1141
CspAI	ACCGGT	1 cut(s)	1333
CspCI	CAANNNNNGTGG	1 cut(s)	38
CviQI	GTAC	2 cut(s)	942, 1141
DdeI	CTNAG	6 cut(s)	351, 575, 661, 709, 728, 1233
DpnI	GATC	8 cut(s)	207, 304, 1008, 1165, 1557, 1917, 1986, 2073
DpnII	GATC	8 cut(s)	205, 302, 1006, 1163, 1555, 1915, 1984, 2071
EaeI	YGGCCR	1 cut(s)	1193
Eam1104I	CTCTTC	3 cut(s)	94, 739, 1373
EarI	CTCTTC	3 cut(s)	94, 739, 1373
Eco130I	CCWWGG	2 cut(s)	285, 384
Eco31I	GGTCTC	1 cut(s)	458
Eco47I	GGWCC	2 cut(s)	1331, 1540
Eco57I	CTGAAG	3 cut(s)	454, 1320, 2199
Eco81I	CCTNAGG	2 cut(s)	351, 661
Eco88I	CYCGRG	1 cut(s)	448
EcoRI	GAATTC	1 cut(s)	1415
EcoRII	CCWGG	4 cut(s)	295, 496, 673, 1461
EcoT14I	CCWWGG	2 cut(s)	285, 384
EcoT22I	ATGCAT	4 cut(s)	268, 1945, 2033, 2263
ErhI	CCWWGG	2 cut(s)	285, 384
FalI	AAGNNNNNCTT	2 cut(s)	1611, 1643
FaqI	GGGAC	7 cut(s)	403, 535, 728, 775, 797, 1374, 1801
FauNDI	CATATG	1 cut(s)	268
FblI	GTMKAC	3 cut(s)	535, 1570, 1848
Fnu4HI	GCNGC	6 cut(s)	706, 1030, 1116, 1119, 1281, 2067
FokI	GGATG	5 cut(s)	148, 620, 908, 1255, 2018
Fsp4HI	GCNGC	6 cut(s)	706, 1030, 1116, 1119, 1281, 2067
FspBI	CTAG	7 cut(s)	335, 1124, 1313, 1577, 1680, 1773, 1973
GlaI	GCGC	2 cut(s)	1921, 2250
GluI	GCNGC	6 cut(s)	706, 1030, 1116, 1119, 1281, 2067
GsuI	CTGGAG	1 cut(s)	1791
HaeIII	GGCC	2 cut(s)	970, 1195
HapII	CCGG	5 cut(s)	165, 420, 893, 1048, 1334
HgaI	GACGC	1 cut(s)	532
HhaI	GCGC	2 cut(s)	1922, 2251
Hin6I	GCGC	2 cut(s)	1920, 2249
HinP1I	GCGC	2 cut(s)	1920, 2249
HincII	GTYRAC	1 cut(s)	2106
HindII	GTYRAC	1 cut(s)	2106
HindIII	AAGCTT	1 cut(s)	2116
HinfI	GANTC	4 cut(s)	140, 1070, 1811, 2191
HpaII	CCGG	5 cut(s)	165, 420, 893, 1048, 1334
HphI	GGTGA	9 cut(s)	179, 599, 790, 830, 1196, 1460, 1505, 1738, 2124
Hpy166II	GTNNAC	6 cut(s)	332, 536, 1468, 1571, 1849, 2106
Hpy188III	TCNNGA	9 cut(s)	409, 806, 1004, 1225, 1244, 1420, 1604, 1647, 1808
Hpy8I	GTNNAC	6 cut(s)	332, 536, 1468, 1571, 1849, 2106
Hpy99I	CGWCG	2 cut(s)	1158, 1360
HpyAV	CCTTC	6 cut(s)	443, 478, 1006, 1601, 1881, 2154
HpyCH4IV	ACGT	1 cut(s)	669
HpyF10VI	GCNNNNNNNGC	4 cut(s)	571, 580, 1260, 1633
HpyF3I	CTNAG	6 cut(s)	351, 575, 661, 709, 728, 1233
HpySE526I	ACGT	1 cut(s)	669
HspAI	GCGC	2 cut(s)	1920, 2249
Kzo9I	GATC	8 cut(s)	205, 302, 1006, 1163, 1555, 1915, 1984, 2071
LmnI	GCTCC	1 cut(s)	453
Lsp1109I	GCAGC	6 cut(s)	717, 1016, 1102, 1105, 1267, 2078
LweI	GCATC	7 cut(s)	30, 1184, 1857, 2018, 2040, 2138, 2270
MabI	ACCWGGT	1 cut(s)	1461
MaeI	CTAG	7 cut(s)	335, 1124, 1313, 1577, 1680, 1773, 1973
MaeII	ACGT	1 cut(s)	669
MaeIII	GTNAC	6 cut(s)	275, 613, 932, 1057, 1682, 1796
MalI	GATC	8 cut(s)	207, 304, 1008, 1165, 1557, 1917, 1986, 2073
MboI	GATC	8 cut(s)	205, 302, 1006, 1163, 1555, 1915, 1984, 2071
MfeI	CAATTG	1 cut(s)	507
MflI	RGATCY	1 cut(s)	1984
MhlI	GDGCHC	1 cut(s)	606
MlsI	TGGCCA	1 cut(s)	1195
MluI	ACGCGT	1 cut(s)	1063
MluNI	TGGCCA	1 cut(s)	1195
MlyI	GAGTC	2 cut(s)	134, 1820
MmeI	TCCRAC	4 cut(s)	848, 1177, 2012, 2137
Mox20I	TGGCCA	1 cut(s)	1195
Mph1103I	ATGCAT	4 cut(s)	268, 1945, 2033, 2263
MroXI	GAANNNNTTC	3 cut(s)	848, 1828, 2118
MscI	TGGCCA	1 cut(s)	1195
MseI	TTAA	5 cut(s)	342, 756, 1979, 2010, 2024
MslI	CAYNNNNRTG	2 cut(s)	1668, 2099
Msp20I	TGGCCA	1 cut(s)	1195
MspA1I	CMGCKG	2 cut(s)	574, 1181
MspCI	CTTAAG	1 cut(s)	755
MspI	CCGG	5 cut(s)	165, 420, 893, 1048, 1334
MspR9I	CCNGG	4 cut(s)	297, 498, 675, 1463
MunI	CAATTG	1 cut(s)	507
Mva1269I	GAATGC	3 cut(s)	986, 1485, 1599
MvaI	CCWGG	4 cut(s)	297, 498, 675, 1463
MvnI	CGCG	5 cut(s)	176, 1065, 1139, 1920, 2251
MwoI	GCNNNNNNNGC	4 cut(s)	571, 580, 1260, 1633
NcoI	CCATGG	1 cut(s)	285
NdeI	CATATG	1 cut(s)	268
NdeII	GATC	8 cut(s)	205, 302, 1006, 1163, 1555, 1915, 1984, 2071
NlaIV	GGNNCC	2 cut(s)	569, 1986
NmuCI	GTSAC	2 cut(s)	613, 1057
NsiI	ATGCAT	4 cut(s)	268, 1945, 2033, 2263
NspI	RCATGY	3 cut(s)	721, 1804, 2230
NspV	TTCGAA	1 cut(s)	1388
PagI	TCATGA	3 cut(s)	408, 1224, 1243
PciI	ACATGT	2 cut(s)	717, 2226
PctI	GAATGC	3 cut(s)	986, 1485, 1599
PdmI	GAANNNNTTC	3 cut(s)	848, 1828, 2118
PfeI	GAWTC	2 cut(s)	1070, 2191
PinAI	ACCGGT	1 cut(s)	1333
PkrI	GCNGC	6 cut(s)	707, 1031, 1117, 1120, 1282, 2068
Ple19I	CGATCG	1 cut(s)	1918
PleI	GAGTC	2 cut(s)	134, 1819
PpsI	GAGTC	2 cut(s)	134, 1819
PscI	ACATGT	2 cut(s)	717, 2226
PsiI	TTATAA	1 cut(s)	1341
Psp6I	CCWGG	4 cut(s)	295, 496, 673, 1461
PspGI	CCWGG	4 cut(s)	295, 496, 673, 1461
PspN4I	GGNNCC	2 cut(s)	569, 1986
PspPI	GGNCC	2 cut(s)	1331, 1540
PstI	CTGCAG	1 cut(s)	1527
PstNI	CAGNNNCTG	1 cut(s)	945
PsuI	RGATCY	1 cut(s)	1984
PvuI	CGATCG	1 cut(s)	1918
PvuII	CAGCTG	2 cut(s)	574, 1181
RsaI	GTAC	2 cut(s)	943, 1142
RsaNI	GTAC	2 cut(s)	942, 1141
RseI	CAYNNNNRTG	2 cut(s)	1668, 2099
SaqAI	TTAA	5 cut(s)	342, 756, 1979, 2010, 2024
SatI	GCNGC	6 cut(s)	706, 1030, 1116, 1119, 1281, 2067
Sau3AI	GATC	8 cut(s)	205, 302, 1006, 1163, 1555, 1915, 1984, 2071
Sau96I	GGNCC	2 cut(s)	1331, 1540
SchI	GAGTC	2 cut(s)	134, 1820
ScrFI	CCNGG	4 cut(s)	297, 498, 675, 1463
SduI	GDGCHC	1 cut(s)	606
SexAI	ACCWGGT	1 cut(s)	1461
SfaNI	GCATC	7 cut(s)	30, 1184, 1857, 2018, 2040, 2138, 2270
SfcI	CTRYAG	5 cut(s)	132, 480, 1110, 1523, 1849
SfuI	TTCGAA	1 cut(s)	1388
SinI	GGWCC	2 cut(s)	1331, 1540
SmiMI	CAYNNNNRTG	2 cut(s)	1668, 2099
SmlI	CTYRAG	3 cut(s)	755, 1617, 1645
SmoI	CTYRAG	3 cut(s)	755, 1617, 1645
SpeI	ACTAGT	1 cut(s)	334
SsiI	CCGC	3 cut(s)	565, 930, 1137
SspMI	CTAG	7 cut(s)	335, 1124, 1313, 1577, 1680, 1773, 1973
StyD4I	CCNGG	4 cut(s)	295, 496, 673, 1461
StyI	CCWWGG	2 cut(s)	285, 384
TaiI	ACGT	1 cut(s)	672
TaqI	TCGA	4 cut(s)	221, 1388, 1605, 2122
TaqII	GACCGA	1 cut(s)	2030
TfiI	GAWTC	2 cut(s)	1070, 2191
Tru1I	TTAA	5 cut(s)	342, 756, 1979, 2010, 2024
Tru9I	TTAA	5 cut(s)	342, 756, 1979, 2010, 2024
TscAI	CASTG	2 cut(s)	27, 334
TseFI	GTSAC	2 cut(s)	613, 1057
TseI	GCWGC	6 cut(s)	705, 1029, 1115, 1118, 1280, 2066
Tsp45I	GTSAC	2 cut(s)	613, 1057
TspGWI	ACGGA	3 cut(s)	601, 1804, 1997
TspRI	CASTG	2 cut(s)	27, 334
Vha464I	CTTAAG	1 cut(s)	755
VpaK11BI	GGWCC	2 cut(s)	1331, 1540
XapI	RAATTY	3 cut(s)	1415, 1716, 1999
XceI	RCATGY	3 cut(s)	721, 1804, 2230
XmiI	GTMKAC	3 cut(s)	535, 1570, 1848
XmnI	GAANNNNTTC	3 cut(s)	848, 1828, 2118
XspI	CTAG	7 cut(s)	335, 1124, 1313, 1577, 1680, 1773, 1973
Zsp2I	ATGCAT	4 cut(s)	268, 1945, 2033, 2263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.