Rmu_co7998958.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co7998958.1
Physical Location & Seq
Forward (+)
1 .. 394
394 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co7998958.1_g000001.1.cds

Sequence Viewer

Length: 394 bp
cattagagggaccagagggtatgttgcaccagaatggttcagaaatactccagttactgcaaaggttgatgtttacagttatggggtgatgctgttggagattatctgttgcaggaggagcctcgaaatggaaagggaaaatgaagaagaggcgatactaactgactgggtttacgattgctacgcgcaaaggagattaaacaagatgatcgaggacgatgaggaggccagaaatgacatgaaaaggttggagaggctagtaatggtggcaatttggtgcatacaagaggatccatctttgagacccaccatgaagaaggttacacaaatgctcgaaggagtggttgatgtatctgtacctccaagtccttctccttttagttcaatttgctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

130

Amino Acids

15.15

Weight (kDa)

4.86

Isoelectric Point (pI)

64.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 186
AclWI GGATC 2 cut(s) 285, 298
AfaI GTAC 1 cut(s) 358
AfiI CCNNNNNNNGG 1 cut(s) 128
AgsI TTSAA 1 cut(s) 385
Alw26I GTCTC 1 cut(s) 296
AlwI GGATC 2 cut(s) 285, 298
AlwNI CAGNNNCTG 1 cut(s) 57
AoxI GGCC 1 cut(s) 226
AspLEI GCGC 1 cut(s) 188
AspS9I GGNCC 1 cut(s) 10
AsuHPI GGTGA 1 cut(s) 98
AvaII GGWCC 1 cut(s) 10
BamHI GGATCC 1 cut(s) 290
BarI GAAGNNNNNNTAC 2 cut(s) 139, 171
BccI CCATC 1 cut(s) 302
BcoDI GTCTC 1 cut(s) 296
BfaI CTAG 1 cut(s) 258
Bme18I GGWCC 1 cut(s) 10
BmgT120I GGNCC 1 cut(s) 10
BmiI GGNNCC 3 cut(s) 11, 120, 292
BmrI ACTGGG 1 cut(s) 176
BmsI GCATC 1 cut(s) 79
BmuI ACTGGG 1 cut(s) 176
BpmI CTGGAG 1 cut(s) 34
BsaI GGTCTC 1 cut(s) 296
Bsc4I CCNNNNNNNGG 1 cut(s) 128
Bse1I ACTGG 2 cut(s) 51, 171
BseLI CCNNNNNNNGG 1 cut(s) 128
BseNI ACTGG 2 cut(s) 51, 171
BseRI GAGGAG 2 cut(s) 131, 237
Bsh1236I CGCG 1 cut(s) 186
BshFI GGCC 1 cut(s) 228
BslFI GGGAC 1 cut(s) 23
BslI CCNNNNNNNGG 1 cut(s) 128
BsmAI GTCTC 1 cut(s) 296
BsmFI GGGAC 1 cut(s) 23
BsnI GGCC 1 cut(s) 228
Bso31I GGTCTC 1 cut(s) 296
Bsp143I GATC 2 cut(s) 208, 290
BspANI GGCC 1 cut(s) 228
BspFNI CGCG 1 cut(s) 186
BspLI GGNNCC 3 cut(s) 11, 120, 292
BspPI GGATC 2 cut(s) 285, 298
BspTNI GGTCTC 1 cut(s) 296
BsrI ACTGG 2 cut(s) 51, 171
BssMI GATC 2 cut(s) 208, 290
Bst4CI ACNGT 1 cut(s) 78
Bst6I CTCTTC 1 cut(s) 142
BstFNI CGCG 1 cut(s) 186
BstHHI GCGC 1 cut(s) 188
BstKTI GATC 2 cut(s) 211, 293
BstMAI GTCTC 1 cut(s) 296
BstMBI GATC 2 cut(s) 208, 290
BstMWI GCNNNNNNNGC 1 cut(s) 118
BstUI CGCG 1 cut(s) 186
BstX2I RGATCY 1 cut(s) 290
BstYI RGATCY 1 cut(s) 290
BsuRI GGCC 1 cut(s) 228
CaiI CAGNNNCTG 1 cut(s) 57
CfoI GCGC 1 cut(s) 188
Cfr13I GGNCC 1 cut(s) 10
Csp6I GTAC 1 cut(s) 357
CviAII CATG 2 cut(s) 239, 311
CviJI RGCY 3 cut(s) 121, 228, 257
CviKI_1 RGCY 3 cut(s) 121, 228, 257
CviQI GTAC 1 cut(s) 357
DpnI GATC 2 cut(s) 210, 292
DpnII GATC 2 cut(s) 208, 290
Eam1104I CTCTTC 1 cut(s) 142
EarI CTCTTC 1 cut(s) 142
Eco31I GGTCTC 1 cut(s) 296
Eco47I GGWCC 1 cut(s) 10
FaeI CATG 2 cut(s) 242, 314
FaiI YATR 5 cut(s) 22, 82, 240, 282, 312
FaqI GGGAC 1 cut(s) 23
FatI CATG 2 cut(s) 238, 310
FspBI CTAG 1 cut(s) 258
GlaI GCGC 1 cut(s) 187
GsuI CTGGAG 1 cut(s) 34
HaeIII GGCC 1 cut(s) 228
HhaI GCGC 1 cut(s) 188
Hin1II CATG 2 cut(s) 242, 314
Hin6I GCGC 1 cut(s) 186
HinP1I GCGC 1 cut(s) 186
HphI GGTGA 1 cut(s) 98
Hpy166II GTNNAC 2 cut(s) 74, 173
Hpy188I TCNGA 1 cut(s) 42
Hpy8I GTNNAC 2 cut(s) 74, 173
HpyAV CCTTC 3 cut(s) 311, 330, 379
HpyCH4III ACNGT 1 cut(s) 78
HpyCH4V TGCA 4 cut(s) 27, 60, 112, 280
HpyF10VI GCNNNNNNNGC 1 cut(s) 118
Hsp92II CATG 2 cut(s) 242, 314
HspAI GCGC 1 cut(s) 186
Kzo9I GATC 2 cut(s) 208, 290
LmnI GCTCC 1 cut(s) 118
LpnPI CCDG 6 cut(s) 26, 43, 64, 98, 152, 242
LweI GCATC 1 cut(s) 79
MaeI CTAG 1 cut(s) 258
MaeIII GTNAC 2 cut(s) 53, 320
MalI GATC 2 cut(s) 210, 292
MboI GATC 2 cut(s) 208, 290
MboII GAAGA 3 cut(s) 156, 159, 326
MflI RGATCY 1 cut(s) 290
MluCI AATT 2 cut(s) 271, 385
MmeI TCCRAC 2 cut(s) 76, 229
MseI TTAA 1 cut(s) 198
MslI CAYNNNNRTG 1 cut(s) 32
MvnI CGCG 1 cut(s) 186
MwoI GCNNNNNNNGC 1 cut(s) 118
NdeII GATC 2 cut(s) 208, 290
NlaIII CATG 2 cut(s) 242, 314
NlaIV GGNNCC 3 cut(s) 11, 120, 292
PspN4I GGNNCC 3 cut(s) 11, 120, 292
PspPI GGNCC 1 cut(s) 10
PstNI CAGNNNCTG 1 cut(s) 57
PsuI RGATCY 1 cut(s) 290
RsaI GTAC 1 cut(s) 358
RsaNI GTAC 1 cut(s) 357
RseI CAYNNNNRTG 1 cut(s) 32
SaqAI TTAA 1 cut(s) 198
Sau3AI GATC 2 cut(s) 208, 290
Sau96I GGNCC 1 cut(s) 10
SetI ASST 4 cut(s) 67, 249, 322, 362
SfaNI GCATC 1 cut(s) 79
SinI GGWCC 1 cut(s) 10
SmiMI CAYNNNNRTG 1 cut(s) 32
Sse9I AATT 2 cut(s) 271, 385
SspMI CTAG 1 cut(s) 258
TaaI ACNGT 1 cut(s) 78
TaqI TCGA 3 cut(s) 124, 211, 334
TasI AATT 2 cut(s) 271, 385
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TspDTI ATGAA 3 cut(s) 157, 255, 327
VpaK11BI GGWCC 1 cut(s) 10
XspI CTAG 1 cut(s) 258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.