Rmu_sc0011280.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011280.1
Physical Location & Seq
Reverse (-)
1 .. 3192
3192 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011280.1_g000001.1.cds

Sequence Viewer

Length: 774 bp
atgtttagtgctatagtttgtatgggatttttcttcatttaccggaagaaacatgtgaggcctaaccataatgttttggactcgaatttgcgctcttttagttatgaagagcttaaagaagcaacaaatggatttaatgaagaattaggaaagggtgcttttggagttgtttacaaaggaatattgcaaattggttctggtgtccccgtggcagtgaagaagcttaaatttgtggtacaagatagtgagaaggaattcaagacggaactgaacataattggtcaaacacatcacaagaatctggttagacttgttggatattgtgacgagggacaagagcggattgatattgcatatggagttgcgaaaggacttcggtacttacatgaagagtgcagaacccagatcatccattgtgacattaagcctcagaacattcttctagatgatcactacactgctcagatagctgactttggattggcaaagcttttaatgatgaatcagcattatttctcagtgatcaggtatgtgtgtgaggcaaacctaacatgcagtttggttatgattcctcctcttcttcaggtttgtgtgtggaattctgatggatgggaaaaacagaagagcagattcttgcagcttccagctgggagaacaccatcttcagtgtcagatactcgcgttcagtttcatcaggatcaggcacatttcttggttgtgcatgagactcagctggccatatttgaaacaacaaaactagaatgtgcaaagcag

Protein Analysis

258

Amino Acids

29.5

Weight (kDa)

7.63

Isoelectric Point (pI)

39.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 340
AccII CGCG 1 cut(s) 681
AciI CCGC 1 cut(s) 340
AclWI GGATC 1 cut(s) 705
AcoI YGGCCR 1 cut(s) 735
AcsI RAATTY 4 cut(s) 85, 227, 254, 598
AcuI CTGAAG 2 cut(s) 566, 648
AfaI GTAC 2 cut(s) 237, 380
AflIII ACRYGT 1 cut(s) 52
AgsI TTSAA 2 cut(s) 259, 746
AluBI AGCT 7 cut(s) 112, 223, 470, 490, 640, 647, 733
AluI AGCT 7 cut(s) 112, 223, 470, 490, 640, 647, 733
Alw26I GTCTC 1 cut(s) 719
AlwI GGATC 1 cut(s) 705
AoxI GGCC 2 cut(s) 59, 735
ApeKI GCWGC 1 cut(s) 637
ApoI RAATTY 4 cut(s) 85, 227, 254, 598
Asp700I GAANNNNTTC 1 cut(s) 254
AspLEI GCGC 1 cut(s) 93
BaeI ACNNNNGTAYC 2 cut(s) 666, 699
BalI TGGCCA 1 cut(s) 737
BbvI GCAGC 1 cut(s) 649
BccI CCATC 3 cut(s) 599, 603, 667
BclI TGATCA 2 cut(s) 448, 522
BcoDI GTCTC 1 cut(s) 719
BfaI CTAG 2 cut(s) 443, 758
BfmI CTRYAG 1 cut(s) 12
BisI GCNGC 1 cut(s) 638
BlsI GCNGC 1 cut(s) 639
BsaJI CCNNGG 1 cut(s) 207
BsaWI WCCGGW 1 cut(s) 42
BseDI CCNNGG 1 cut(s) 207
BseGI GGATG 2 cut(s) 408, 614
BseMII CTCAG 4 cut(s) 443, 476, 531, 743
BseRI GAGGAG 1 cut(s) 564
BseXI GCAGC 1 cut(s) 649
BseYI CCCAGC 1 cut(s) 647
BsgI GTGCAG 1 cut(s) 415
Bsh1236I CGCG 1 cut(s) 681
BshFI GGCC 2 cut(s) 61, 737
BsiSI CCGG 1 cut(s) 43
BslFI GGGAC 2 cut(s) 188, 345
BsmAI GTCTC 1 cut(s) 719
BsmFI GGGAC 2 cut(s) 188, 345
BsnI GGCC 2 cut(s) 61, 737
Bsp143I GATC 4 cut(s) 405, 448, 522, 697
BspACI CCGC 1 cut(s) 340
BspANI GGCC 2 cut(s) 61, 737
BspCNI CTCAG 4 cut(s) 442, 475, 530, 742
BspFNI CGCG 1 cut(s) 681
BspPI GGATC 1 cut(s) 705
BspQI GCTCTTC 2 cut(s) 102, 617
BsrBI CCGCTC 1 cut(s) 340
BssECI CCNNGG 1 cut(s) 207
BssMI GATC 4 cut(s) 405, 448, 522, 697
Bst6I CTCTTC 4 cut(s) 102, 384, 582, 617
BstC8I GCNNGC 1 cut(s) 735
BstDEI CTNAG 4 cut(s) 429, 462, 517, 729
BstDSI CCRYGG 1 cut(s) 207
BstF5I GGATG 2 cut(s) 408, 614
BstFNI CGCG 1 cut(s) 681
BstHHI GCGC 1 cut(s) 93
BstKTI GATC 4 cut(s) 408, 451, 525, 700
BstMAI GTCTC 1 cut(s) 719
BstMBI GATC 4 cut(s) 405, 448, 522, 697
BstMWI GCNNNNNNNGC 1 cut(s) 467
BstNSI RCATGY 2 cut(s) 56, 555
BstSFI CTRYAG 1 cut(s) 12
BstUI CGCG 1 cut(s) 681
BstV1I GCAGC 1 cut(s) 649
BsuRI GGCC 2 cut(s) 61, 737
BtgI CCRYGG 1 cut(s) 207
BtsCI GGATG 2 cut(s) 408, 614
BtsI GCAGTG 2 cut(s) 219, 456
BtsIMutI CAGTG 4 cut(s) 219, 456, 525, 672
Cac8I GCNNGC 1 cut(s) 735
CfoI GCGC 1 cut(s) 93
Csp6I GTAC 2 cut(s) 236, 379
CviAII CATG 4 cut(s) 53, 386, 552, 722
CviQI GTAC 2 cut(s) 236, 379
DdeI CTNAG 4 cut(s) 429, 462, 517, 729
DpnI GATC 4 cut(s) 407, 450, 524, 699
DpnII GATC 4 cut(s) 405, 448, 522, 697
EaeI YGGCCR 1 cut(s) 735
Eam1104I CTCTTC 4 cut(s) 102, 384, 582, 617
EarI CTCTTC 4 cut(s) 102, 384, 582, 617
Eco147I AGGCCT 1 cut(s) 61
Eco57I CTGAAG 2 cut(s) 566, 648
EcoRI GAATTC 2 cut(s) 254, 598
FaeI CATG 4 cut(s) 56, 389, 555, 725
FaqI GGGAC 2 cut(s) 188, 345
FatI CATG 4 cut(s) 52, 385, 551, 721
FauNDI CATATG 1 cut(s) 355
FbaI TGATCA 2 cut(s) 448, 522
Fnu4HI GCNGC 1 cut(s) 638
FokI GGATG 2 cut(s) 395, 621
Fsp4HI GCNGC 1 cut(s) 638
FspBI CTAG 2 cut(s) 443, 758
GlaI GCGC 1 cut(s) 92
GluI GCNGC 1 cut(s) 638
GsaI CCCAGC 1 cut(s) 651
HaeIII GGCC 2 cut(s) 61, 737
HapII CCGG 1 cut(s) 43
HhaI GCGC 1 cut(s) 93
Hin1II CATG 4 cut(s) 56, 389, 555, 725
Hin6I GCGC 1 cut(s) 91
HinP1I GCGC 1 cut(s) 91
HindIII AAGCTT 2 cut(s) 221, 488
HinfI GANTC 6 cut(s) 80, 298, 502, 568, 630, 727
HpaII CCGG 1 cut(s) 43
Hpy166II GTNNAC 1 cut(s) 172
Hpy188I TCNGA 4 cut(s) 432, 465, 604, 673
Hpy188III TCNNGA 3 cut(s) 259, 443, 695
Hpy8I GTNNAC 1 cut(s) 172
HpyAV CCTTC 1 cut(s) 244
HpyCH4V TGCA 7 cut(s) 187, 353, 396, 555, 637, 721, 767
HpyF10VI GCNNNNNNNGC 1 cut(s) 467
HpyF3I CTNAG 4 cut(s) 429, 462, 517, 729
Hsp92II CATG 4 cut(s) 56, 389, 555, 725
HspAI GCGC 1 cut(s) 91
Ksp22I TGATCA 2 cut(s) 448, 522
Kzo9I GATC 4 cut(s) 405, 448, 522, 697
LguI GCTCTTC 2 cut(s) 102, 617
Lsp1109I GCAGC 1 cut(s) 649
MaeI CTAG 2 cut(s) 443, 758
MaeIII GTNAC 2 cut(s) 323, 416
MalI GATC 4 cut(s) 407, 450, 524, 699
MbiI CCGCTC 1 cut(s) 340
MboI GATC 4 cut(s) 405, 448, 522, 697
MlsI TGGCCA 1 cut(s) 737
MluCI AATT 7 cut(s) 85, 143, 189, 227, 254, 276, 598
MluNI TGGCCA 1 cut(s) 737
MlyI GAGTC 2 cut(s) 74, 721
MmeI TCCRAC 1 cut(s) 295
MnlI CCTC 6 cut(s) 51, 322, 438, 532, 582, 585
Mox20I TGGCCA 1 cut(s) 737
MroXI GAANNNNTTC 1 cut(s) 254
MscI TGGCCA 1 cut(s) 737
MseI TTAA 5 cut(s) 114, 135, 225, 423, 494
Msp20I TGGCCA 1 cut(s) 737
MspA1I CMGCKG 2 cut(s) 647, 733
MspI CCGG 1 cut(s) 43
MvnI CGCG 1 cut(s) 681
MwoI GCNNNNNNNGC 1 cut(s) 467
NdeI CATATG 1 cut(s) 355
NdeII GATC 4 cut(s) 405, 448, 522, 697
NlaIII CATG 4 cut(s) 56, 389, 555, 725
NmuCI GTSAC 2 cut(s) 323, 416
NspI RCATGY 2 cut(s) 56, 555
PceI AGGCCT 1 cut(s) 61
PciI ACATGT 1 cut(s) 52
PciSI GCTCTTC 2 cut(s) 102, 617
PdmI GAANNNNTTC 1 cut(s) 254
PfeI GAWTC 4 cut(s) 298, 502, 568, 630
PkrI GCNGC 1 cut(s) 639
PleI GAGTC 2 cut(s) 74, 721
PpsI GAGTC 2 cut(s) 74, 721
PscI ACATGT 1 cut(s) 52
PspFI CCCAGC 1 cut(s) 647
PvuII CAGCTG 2 cut(s) 647, 733
RsaI GTAC 2 cut(s) 237, 380
RsaNI GTAC 2 cut(s) 236, 379
SapI GCTCTTC 2 cut(s) 102, 617
SaqAI TTAA 5 cut(s) 114, 135, 225, 423, 494
SatI GCNGC 1 cut(s) 638
Sau3AI GATC 4 cut(s) 405, 448, 522, 697
SchI GAGTC 2 cut(s) 74, 721
SfcI CTRYAG 1 cut(s) 12
Sse9I AATT 7 cut(s) 85, 143, 189, 227, 254, 276, 598
SseBI AGGCCT 1 cut(s) 61
SsiI CCGC 1 cut(s) 340
SspI AATATT 1 cut(s) 183
SspMI CTAG 2 cut(s) 443, 758
StuI AGGCCT 1 cut(s) 61
TaqI TCGA 1 cut(s) 83
TasI AATT 7 cut(s) 85, 143, 189, 227, 254, 276, 598
TfiI GAWTC 4 cut(s) 298, 502, 568, 630
Tru1I TTAA 5 cut(s) 114, 135, 225, 423, 494
Tru9I TTAA 5 cut(s) 114, 135, 225, 423, 494
TscAI CASTG 4 cut(s) 219, 463, 525, 672
TseFI GTSAC 2 cut(s) 323, 416
TseI GCWGC 1 cut(s) 637
Tsp45I GTSAC 2 cut(s) 323, 416
TspDTI ATGAA 6 cut(s) 25, 120, 153, 402, 515, 680
TspGWI ACGGA 1 cut(s) 278
TspRI CASTG 4 cut(s) 219, 463, 525, 672
XapI RAATTY 4 cut(s) 85, 227, 254, 598
XbaI TCTAGA 1 cut(s) 442
XceI RCATGY 2 cut(s) 56, 555
XmnI GAANNNNTTC 1 cut(s) 254
XspI CTAG 2 cut(s) 443, 758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.