MD11G1021400.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
1848039 .. 1850468
2430 bp
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UTR
Exon/CDS
Intron
MD11G1021400.v1.1.491

Sequence Viewer

Length: 2430 bp
ATGGCAGTGGCTCTTTCTGTACGGATGCTTTTGTTCTTCTCACTGTTTTTGCTACCAGTTTCTGTGTTTTCCCAAAATAATGGAAGAGTAGCAGTTGGGAGTTCTCTGACTGCAAGTACAGGCGACTCCTCATCATGGCTTTCTCCATCCGGCGATTTCGCGTTTGGATTTTCGCCCCTCGGAAACAATGATTTTTTCTTGCTTTCGATATGGTATGCGAAAATCCCAGACGAAACCGTAGTTTGGTATGCATATGACGGTAACAACCCCATCGTTGCACCTAGGGGATCAGTTCTGACCTTGACTGCCAACGGTGGACTAGTTCTTAACAATCCTCAGGGTGGAGAGATATGGAAATCCGAAACAACTTTCGGGATTGTTGAGAACGGGGTCATGAATGACACCGGAAACTTTGTCCTTCAAGACAAAAACTCAGAGAGCTTGTGGGAGACCTTCAGCAATCCCACAGACACCGTTTTGCCTGGACAGACAATTGAGAAAAGTGGGAAGCTTTCGTGTAGACAATCGGAGACTAACTACACAAAGGGGCGGTTCCAGCTGCGCTTGCAAGATGATGGAAACCTCGTGCTCAACACCGTCAACTTGCCAACAGATTTTGCCAACAACCCTTACTTCGCCACGGACACGATCGCAGGGACTGTGGAAGGTAGTCAAGGTAAACAATTCGTGTTCAACAGCTCAGGGTACATGTTTGTTCTGAGAGAAAATGGTGGAAGATTCACTCTTACAGGGCCACAGGGAGTCTCGACGAGAGACAACTACATAAGGGCAACTCTTGATTTTGATGGGATTTTCACTTTATATTCTCACCCGAAAAACTTCACTGGAAATCCAAGCTGGAGTAGTCCTCTGTGGTATACACCGGATGATATTTGCCAAAAACTTCTTGAAGACGAGGGCGTTGGTGTTTGTGGTTACAACAGTGTCTGTAAGCTCAAACCAGATAGTAATAGGCCAACCTGCGAATGCCCAAAAGGGTTTTCTTTTCTTGATCCGAAGGATATATACCGAGGCTGCAAACCCGATTTTATACAAGGCTGTGAAGAAGATGAGCTGCAAGGTCCCAGAAACGATTTGTATGATGTCCAAGTGCTGACAAATACTGATTGGCCAACCTCAGATTATGTGCAGCTAAAGCCTTCTACGGCGGACAAGTGCAACGAGTCTTGCTTTCAAGACTGTTTGTGCGCTGTTGCTGTGTTCCGGTCTGAAACCTGCTGGAAAAAGAAGTTACCTCTCTCAAACGGGAGAGTGGATGTCAGTCTTAATTCACAGACCTTCATAAAAGTCCGAAAGGATAATGTAACTCTGCCGTTTCCTCCAAAGCCAATTCCAGATGATAAAGAGAAGAGCCGGAAATCTGTGATACGCGTAGAATCAGTACTATTAGGTACCTCTATCTTTGTTAATTTTGTCTTAAGTTCTGCTCTTTGTTTCGGTATTTTCTTCATTTTCCGGAAGAAACCTGTAACATCTAGTACCGATATTGTTTTGGACTCGAATTTGCGCTCTTTTTGCTATGAAGAGCTGCGAGAAGCTACAAATGGTTTCACGGAAGAATTAGGAAAGGGTGCTTTTGGAGTGGTTTTCAAAGGGGTGATGCAAATTGGTTCTGGTGTCGAAGTGGCGGTGAAGAAGCTAAACTATGTTATGCAAGATGTCGAGAAGGAGTTTAAAACAGAACTGAAAGTAATTGGTCAGACACATCACAAGAATCTGGTTCGTCTTTTTGGATATTGTGACGAGGGGCAACAGAGATTACTAGTTTATGAGTTCTTGAGAAATGGCACATTGGCAAGCTTTCTTTTTTCTGATATCAAACCAAGTTGGAGACAGCGAATTGACATCGCTTATGGCGTTGCACAGGGGCTTCTGTACTTGCATGAAGAGTGCAGCACGCAGATTATCCATTGTGACATAAAGCCGCAGAACATACTTCTCGATGATTATTACACTGCTCGGATCTCTGATTTTGGTTTGGCAAAACTTATGCTGATGAATCAGAGCCAGACTCATACCGCCATCCGAGGAACAAAAGGTTATGTTGCACCTGAGTGGTTCAGGAACTTGCCGATCACTACCAAAGTTGATGTGTACAGCTTTGGTGTTGTGCTGCTAGAAATCGTTTGTTGTAGGAGAAGCGTTGACATGGAAGGTAACTGTGAAGAGAGCGCAATTTTAACGTATTGGGTTTATGATTGCTACGTTGAAGGAGGACTAGATGCTGTTGTAGATTATGAAGTTGAGGCCTTGGGTGATCGAACGACACTGGAAAAGTTTGTGATGGTTGCGATTTGGTGTATTCAGGAAGATCCATCTCTTAGGCCTACTATGAGGAAGGTTGTGCAGATGCTTGAAGGAGTTGTCGAAGTGCCTGTTCCACCATGTCCATCCCCATATACCAGATAA

Protein Analysis

810

Amino Acids

90.43

Weight (kDa)

5.09

Isoelectric Point (pI)

30.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 79 - 168 1.7e-14 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 524 - 792 1e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 525 - 790 3.7e-47 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 989, 1244
Acc65I GGTACC 1 cut(s) 1412
AccB1I GGYRCC 1 cut(s) 1412
AccI GTMKAC 2 cut(s) 520, 878
AccII CGCG 2 cut(s) 161, 1392
AccIII TCCGGA 1 cut(s) 1476
AciI CCGC 5 cut(s) 550, 1169, 1649, 1946, 2040
AclWI GGATC 4 cut(s) 295, 1007, 1991, 2327
AcoI YGGCCR 1 cut(s) 1130
AcsI RAATTY 1 cut(s) 1522
AcuI CTGAAG 1 cut(s) 439
AfaI GTAC 8 cut(s) 21, 118, 707, 1404, 1414, 1501, 1898, 2117
AfiI CCNNNNNNNGG 3 cut(s) 135, 243, 341
AflII CTTAAG 1 cut(s) 1438
AflIII ACRYGT 2 cut(s) 708, 1390
AgsI TTSAA 7 cut(s) 422, 694, 911, 1196, 1612, 2231, 2378
AhlI ACTAGT 2 cut(s) 319, 1783
AjnI CCWGG 1 cut(s) 481
AjuI GAANNNNNNNTTGG 2 cut(s) 985, 1017
AleI CACNNNNGTG 1 cut(s) 2074
Alw21I GWGCWC 1 cut(s) 591
Alw26I GTCTC 5 cut(s) 443, 524, 768, 769, 1846
AlwI GGATC 4 cut(s) 295, 1007, 1991, 2327
AlwNI CAGNNNCTG 3 cut(s) 62, 659, 948
Aor13HI TCCGGA 1 cut(s) 1476
AoxI GGCC 5 cut(s) 752, 974, 1130, 2268, 2345
ApeKI GCWGC 7 cut(s) 559, 1035, 1075, 1150, 1549, 1914, 2134
ApoI RAATTY 1 cut(s) 1522
Asp700I GAANNNNTTC 1 cut(s) 839
Asp718I GGTACC 1 cut(s) 1412
AspA2I CCTAGG 1 cut(s) 281
AspLEI GCGC 4 cut(s) 564, 1211, 1530, 2195
AspS9I GGNCC 2 cut(s) 752, 1082
AsuHPI GGTGA 4 cut(s) 821, 1630, 1663, 2288
AvaII GGWCC 1 cut(s) 1082
AvrII CCTAGG 1 cut(s) 281
AxyI CCTNAGG 1 cut(s) 336
BalI TGGCCA 1 cut(s) 1132
BanI GGYRCC 1 cut(s) 1412
BarI GAAGNNNNNNTAC 2 cut(s) 1010, 1042
BauI CACGAG 1 cut(s) 584
BbsI GAAGAC 1 cut(s) 918
Bbv12I GWGCWC 1 cut(s) 591
BbvI GCAGC 7 cut(s) 546, 1022, 1062, 1162, 1536, 1926, 2121
BccI CCATC 8 cut(s) 154, 278, 569, 800, 2051, 2299, 2344, 2419
BceAI ACGGC 2 cut(s) 1182, 1318
BciT130I CCWGG 1 cut(s) 483
BcoDI GTCTC 5 cut(s) 443, 524, 768, 769, 1846
BcuI ACTAGT 2 cut(s) 319, 1783
BfaI CTAG 6 cut(s) 282, 320, 1497, 1784, 2138, 2240
BfrI CTTAAG 1 cut(s) 1438
BfuAI ACCTGC 2 cut(s) 989, 1244
BisI GCNGC 8 cut(s) 560, 1036, 1076, 1151, 1550, 1915, 1946, 2135
BlnI CCTAGG 1 cut(s) 281
BlsI GCNGC 8 cut(s) 561, 1037, 1077, 1152, 1551, 1916, 1947, 2136
BmcAI AGTACT 1 cut(s) 1404
Bme1390I CCNGG 1 cut(s) 483
Bme18I GGWCC 1 cut(s) 1082
BmgT120I GGNCC 2 cut(s) 752, 1082
BmiI GGNNCC 3 cut(s) 554, 1084, 1414
BmrFI CCNGG 1 cut(s) 483
BmsI GCATC 4 cut(s) 15, 1611, 2233, 2361
BpiI GAAGAC 1 cut(s) 918
BplI GAGNNNNNCTC 4 cut(s) 853, 885, 2017, 2049
BpmI CTGGAG 1 cut(s) 880
Bpu10I CCTNAGC 1 cut(s) 700
BpuEI CTTGAG 1 cut(s) 1819
BsaI GGTCTC 1 cut(s) 443
BsaJI CCNNGG 6 cut(s) 178, 281, 639, 1030, 2047, 2271
BsaWI WCCGGW 4 cut(s) 404, 883, 1224, 1476
Bsc4I CCNNNNNNNGG 3 cut(s) 135, 243, 341
Bse1I ACTGG 3 cut(s) 56, 850, 2295
Bse21I CCTNAGG 1 cut(s) 336
BseAI TCCGGA 1 cut(s) 1476
BseBI CCWGG 1 cut(s) 483
BseDI CCNNGG 6 cut(s) 178, 281, 639, 1030, 2047, 2271
BseGI GGATG 6 cut(s) 30, 146, 892, 1282, 2043, 2411
BseLI CCNNNNNNNGG 3 cut(s) 135, 243, 341
BseMII CTCAG 6 cut(s) 350, 447, 710, 714, 1152, 2064
BseNI ACTGG 3 cut(s) 56, 850, 2295
BseRI GAGGAG 1 cut(s) 118
BseXI GCAGC 7 cut(s) 546, 1022, 1062, 1162, 1536, 1926, 2121
BsgI GTGCAG 3 cut(s) 1169, 1933, 2387
Bsh1236I CGCG 2 cut(s) 161, 1392
Bsh1285I CGRYCG 1 cut(s) 651
BshFI GGCC 5 cut(s) 754, 976, 1132, 2270, 2347
BshNI GGYRCC 1 cut(s) 1412
BsiEI CGRYCG 1 cut(s) 651
BsiHKAI GWGCWC 1 cut(s) 591
BsiSI CCGG 6 cut(s) 150, 405, 884, 1225, 1375, 1477
BslFI GGGAC 2 cut(s) 670, 1068
BslI CCNNNNNNNGG 3 cut(s) 135, 243, 341
BsmAI GTCTC 5 cut(s) 443, 524, 768, 769, 1846
BsmFI GGGAC 2 cut(s) 670, 1068
BsmI GAATGC 1 cut(s) 992
BsnI GGCC 5 cut(s) 754, 976, 1132, 2270, 2347
Bso31I GGTCTC 1 cut(s) 443
Bsp1286I GDGCHC 1 cut(s) 591
Bsp13I TCCGGA 1 cut(s) 1476
Bsp1407I TGTACA 1 cut(s) 2115
Bsp143I GATC 7 cut(s) 287, 648, 1012, 1983, 2094, 2278, 2332
BspACI CCGC 5 cut(s) 550, 1169, 1649, 1946, 2040
BspANI GGCC 5 cut(s) 754, 976, 1132, 2270, 2347
BspCNI CTCAG 6 cut(s) 349, 446, 711, 713, 1151, 2065
BspEI TCCGGA 1 cut(s) 1476
BspFNI CGCG 2 cut(s) 161, 1392
BspHI TCATGA 1 cut(s) 393
BspLI GGNNCC 3 cut(s) 554, 1084, 1414
BspMI ACCTGC 2 cut(s) 989, 1244
BspPI GGATC 4 cut(s) 295, 1007, 1991, 2327
BspQI GCTCTTC 2 cut(s) 1364, 1539
BspT107I GGYRCC 1 cut(s) 1412
BspTI CTTAAG 1 cut(s) 1438
BspTNI GGTCTC 1 cut(s) 443
BsrGI TGTACA 1 cut(s) 2115
BsrI ACTGG 3 cut(s) 56, 850, 2295
BssECI CCNNGG 6 cut(s) 178, 281, 639, 1030, 2047, 2271
BssMI GATC 7 cut(s) 287, 648, 1012, 1983, 2094, 2278, 2332
BssNAI GTATAC 1 cut(s) 879
BssSI CACGAG 1 cut(s) 584
BssT1I CCWWGG 2 cut(s) 281, 2271
Bst1107I GTATAC 1 cut(s) 879
Bst2BI CACGAG 1 cut(s) 584
Bst2UI CCWGG 1 cut(s) 483
Bst6I CTCTTC 5 cut(s) 79, 1364, 1539, 1902, 2181
BstAFI CTTAAG 1 cut(s) 1438
BstAUI TGTACA 1 cut(s) 2115
BstC8I GCNNGC 3 cut(s) 566, 1819, 1919
BstDEI CTNAG 7 cut(s) 336, 433, 700, 719, 1138, 2073, 2342
BstDSI CCRYGG 1 cut(s) 639
BstF5I GGATG 6 cut(s) 30, 146, 892, 1282, 2043, 2411
BstFNI CGCG 2 cut(s) 161, 1392
BstHHI GCGC 4 cut(s) 564, 1211, 1530, 2195
BstKTI GATC 7 cut(s) 290, 651, 1015, 1986, 2097, 2281, 2335
BstMAI GTCTC 5 cut(s) 443, 524, 768, 769, 1846
BstMBI GATC 7 cut(s) 287, 648, 1012, 1983, 2094, 2278, 2332
BstMCI CGRYCG 1 cut(s) 651
BstMWI GCNNNNNNNGC 4 cut(s) 556, 565, 1156, 1536
BstNI CCWGG 1 cut(s) 483
BstNSI RCATGY 1 cut(s) 712
BstSCI CCNGG 1 cut(s) 481
BstUI CGCG 2 cut(s) 161, 1392
BstV1I GCAGC 7 cut(s) 546, 1022, 1062, 1162, 1536, 1926, 2121
BstV2I GAAGAC 1 cut(s) 918
BstX2I RGATCY 2 cut(s) 1983, 2332
BstXI CCANNNNNNTGG 1 cut(s) 80
BstYI RGATCY 2 cut(s) 1983, 2332
BstZ17I GTATAC 1 cut(s) 879
Bsu36I CCTNAGG 1 cut(s) 336
BsuRI GGCC 5 cut(s) 754, 976, 1132, 2270, 2347
BtgI CCRYGG 1 cut(s) 639
BtgZI GCGATG 1 cut(s) 1852
BtsCI GGATG 6 cut(s) 30, 146, 892, 1282, 2043, 2411
BtsI GCAGTG 2 cut(s) 12, 1974
BtsIMutI CAGTG 6 cut(s) 12, 41, 843, 949, 1974, 2288
BveI ACCTGC 2 cut(s) 989, 1244
Cac8I GCNNGC 3 cut(s) 566, 1819, 1919
CaiI CAGNNNCTG 3 cut(s) 62, 659, 948
CciI TCATGA 1 cut(s) 393
CfoI GCGC 4 cut(s) 564, 1211, 1530, 2195
Cfr13I GGNCC 2 cut(s) 752, 1082
Csp6I GTAC 8 cut(s) 20, 117, 706, 1403, 1413, 1500, 1897, 2116
CviAII CATG 6 cut(s) 135, 394, 709, 1904, 2170, 2406
CviQI GTAC 8 cut(s) 20, 117, 706, 1403, 1413, 1500, 1897, 2116
DdeI CTNAG 7 cut(s) 336, 433, 700, 719, 1138, 2073, 2342
DpnI GATC 7 cut(s) 289, 650, 1014, 1985, 2096, 2280, 2334
DpnII GATC 7 cut(s) 287, 648, 1012, 1983, 2094, 2278, 2332
DraI TTTAAA 1 cut(s) 1696
EaeI YGGCCR 1 cut(s) 1130
Eam1104I CTCTTC 5 cut(s) 79, 1364, 1539, 1902, 2181
EarI CTCTTC 5 cut(s) 79, 1364, 1539, 1902, 2181
EciI GGCGGA 1 cut(s) 1184
Eco130I CCWWGG 2 cut(s) 281, 2271
Eco147I AGGCCT 2 cut(s) 2270, 2347
Eco31I GGTCTC 1 cut(s) 443
Eco32I GATATC 1 cut(s) 1837
Eco47I GGWCC 1 cut(s) 1082
Eco57I CTGAAG 1 cut(s) 439
Eco81I CCTNAGG 1 cut(s) 336
EcoO109I RGGNCCY 1 cut(s) 1082
EcoRII CCWGG 1 cut(s) 481
EcoRV GATATC 1 cut(s) 1837
EcoT14I CCWWGG 2 cut(s) 281, 2271
EcoT22I ATGCAT 1 cut(s) 253
ErhI CCWWGG 2 cut(s) 281, 2271
FaeI CATG 6 cut(s) 138, 397, 712, 1907, 2173, 2409
FaqI GGGAC 2 cut(s) 670, 1068
FatI CATG 6 cut(s) 134, 393, 708, 1903, 2169, 2405
FauNDI CATATG 1 cut(s) 253
FblI GTMKAC 2 cut(s) 520, 878
Fnu4HI GCNGC 8 cut(s) 560, 1036, 1076, 1151, 1550, 1915, 1946, 2135
FokI GGATG 6 cut(s) 37, 133, 899, 1289, 2030, 2398
Fsp4HI GCNGC 8 cut(s) 560, 1036, 1076, 1151, 1550, 1915, 1946, 2135
FspBI CTAG 6 cut(s) 282, 320, 1497, 1784, 2138, 2240
GlaI GCGC 4 cut(s) 563, 1210, 1529, 2194
GluI GCNGC 8 cut(s) 560, 1036, 1076, 1151, 1550, 1915, 1946, 2135
GsuI CTGGAG 1 cut(s) 880
HaeIII GGCC 5 cut(s) 754, 976, 1132, 2270, 2347
HapII CCGG 6 cut(s) 150, 405, 884, 1225, 1375, 1477
HhaI GCGC 4 cut(s) 564, 1211, 1530, 2195
Hin1II CATG 6 cut(s) 138, 397, 712, 1907, 2173, 2409
Hin6I GCGC 4 cut(s) 562, 1209, 1528, 2193
HinP1I GCGC 4 cut(s) 562, 1209, 1528, 2193
HincII GTYRAC 2 cut(s) 601, 2167
HindII GTYRAC 2 cut(s) 601, 2167
HindIII AAGCTT 2 cut(s) 509, 1819
HinfI GANTC 9 cut(s) 125, 738, 762, 1184, 1397, 1517, 1735, 2020, 2032
HpaII CCGG 6 cut(s) 150, 405, 884, 1225, 1375, 1477
HphI GGTGA 4 cut(s) 821, 1630, 1663, 2288
Hpy166II GTNNAC 7 cut(s) 317, 521, 601, 680, 879, 2116, 2167
Hpy8I GTNNAC 7 cut(s) 317, 521, 601, 680, 879, 2116, 2167
Hpy99I CGWCG 1 cut(s) 772
HpyCH4IV ACGT 2 cut(s) 2204, 2226
HpyF10VI GCNNNNNNNGC 4 cut(s) 556, 565, 1156, 1536
HpyF3I CTNAG 7 cut(s) 336, 433, 700, 719, 1138, 2073, 2342
HpySE526I ACGT 2 cut(s) 2204, 2226
Hsp92II CATG 6 cut(s) 138, 397, 712, 1907, 2173, 2409
HspAI GCGC 4 cut(s) 562, 1209, 1528, 2193
Kpn2I TCCGGA 1 cut(s) 1476
KpnI GGTACC 1 cut(s) 1416
Kzo9I GATC 7 cut(s) 287, 648, 1012, 1983, 2094, 2278, 2332
LguI GCTCTTC 2 cut(s) 1364, 1539
Lsp1109I GCAGC 7 cut(s) 546, 1022, 1062, 1162, 1536, 1926, 2121
LweI GCATC 4 cut(s) 15, 1611, 2233, 2361
MaeI CTAG 6 cut(s) 282, 320, 1497, 1784, 2138, 2240
MaeII ACGT 2 cut(s) 2204, 2226
MaeIII GTNAC 8 cut(s) 260, 935, 1251, 1324, 1489, 1760, 1934, 2177
MalI GATC 7 cut(s) 289, 650, 1014, 1985, 2096, 2280, 2334
MboI GATC 7 cut(s) 287, 648, 1012, 1983, 2094, 2278, 2332
MfeI CAATTG 1 cut(s) 492
MflI RGATCY 2 cut(s) 1983, 2332
MhlI GDGCHC 1 cut(s) 591
MlsI TGGCCA 1 cut(s) 1132
MluI ACGCGT 1 cut(s) 1390
MluNI TGGCCA 1 cut(s) 1132
MlyI GAGTC 5 cut(s) 119, 771, 1193, 1511, 2026
MmeI TCCRAC 1 cut(s) 1829
Mox20I TGGCCA 1 cut(s) 1132
Mph1103I ATGCAT 1 cut(s) 253
MroI TCCGGA 1 cut(s) 1476
MroXI GAANNNNTTC 1 cut(s) 839
MscI TGGCCA 1 cut(s) 1132
MseI TTAA 6 cut(s) 327, 1287, 1428, 1439, 1695, 2201
MslI CAYNNNNRTG 1 cut(s) 2074
Msp20I TGGCCA 1 cut(s) 1132
MspA1I CMGCKG 1 cut(s) 559
MspCI CTTAAG 1 cut(s) 1438
MspI CCGG 6 cut(s) 150, 405, 884, 1225, 1375, 1477
MspR9I CCNGG 1 cut(s) 483
MunI CAATTG 1 cut(s) 492
Mva1269I GAATGC 1 cut(s) 992
MvaI CCWGG 1 cut(s) 483
MvnI CGCG 2 cut(s) 161, 1392
MwoI GCNNNNNNNGC 4 cut(s) 556, 565, 1156, 1536
NdeI CATATG 1 cut(s) 253
NdeII GATC 7 cut(s) 287, 648, 1012, 1983, 2094, 2278, 2332
NlaIII CATG 6 cut(s) 138, 397, 712, 1907, 2173, 2409
NlaIV GGNNCC 3 cut(s) 554, 1084, 1414
NmuCI GTSAC 2 cut(s) 1760, 1934
NsiI ATGCAT 1 cut(s) 253
NspI RCATGY 1 cut(s) 712
OliI CACNNNNGTG 1 cut(s) 2074
PagI TCATGA 1 cut(s) 393
PceI AGGCCT 2 cut(s) 2270, 2347
PciI ACATGT 1 cut(s) 708
PciSI GCTCTTC 2 cut(s) 1364, 1539
PcsI WCGNNNNNNNCGW 1 cut(s) 1875
PctI GAATGC 1 cut(s) 992
PdmI GAANNNNTTC 1 cut(s) 839
PfeI GAWTC 4 cut(s) 738, 1397, 1735, 2020
PkrI GCNGC 8 cut(s) 561, 1037, 1077, 1152, 1551, 1916, 1947, 2136
Ple19I CGATCG 1 cut(s) 651
PleI GAGTC 5 cut(s) 119, 770, 1192, 1511, 2026
PpsI GAGTC 5 cut(s) 119, 770, 1192, 1511, 2026
PpuMI RGGWCCY 1 cut(s) 1082
PscI ACATGT 1 cut(s) 708
Psp5II RGGWCCY 1 cut(s) 1082
Psp6I CCWGG 1 cut(s) 481
PspGI CCWGG 1 cut(s) 481
PspN4I GGNNCC 3 cut(s) 554, 1084, 1414
PspPI GGNCC 2 cut(s) 752, 1082
PspPPI RGGWCCY 1 cut(s) 1082
PstNI CAGNNNCTG 3 cut(s) 62, 659, 948
PsuI RGATCY 2 cut(s) 1983, 2332
PvuI CGATCG 1 cut(s) 651
PvuII CAGCTG 1 cut(s) 559
RsaI GTAC 8 cut(s) 21, 118, 707, 1404, 1414, 1501, 1898, 2117
RsaNI GTAC 8 cut(s) 20, 117, 706, 1403, 1413, 1500, 1897, 2116
RseI CAYNNNNRTG 1 cut(s) 2074
SapI GCTCTTC 2 cut(s) 1364, 1539
SaqAI TTAA 6 cut(s) 327, 1287, 1428, 1439, 1695, 2201
SatI GCNGC 8 cut(s) 560, 1036, 1076, 1151, 1550, 1915, 1946, 2135
Sau3AI GATC 7 cut(s) 287, 648, 1012, 1983, 2094, 2278, 2332
Sau96I GGNCC 2 cut(s) 752, 1082
ScaI AGTACT 1 cut(s) 1404
SchI GAGTC 5 cut(s) 119, 771, 1193, 1511, 2026
ScrFI CCNGG 1 cut(s) 483
SduI GDGCHC 1 cut(s) 591
SfaNI GCATC 4 cut(s) 15, 1611, 2233, 2361
SinI GGWCC 1 cut(s) 1082
SmiMI CAYNNNNRTG 1 cut(s) 2074
SmlI CTYRAG 2 cut(s) 1438, 1798
SmoI CTYRAG 2 cut(s) 1438, 1798
SpeI ACTAGT 2 cut(s) 319, 1783
SseBI AGGCCT 2 cut(s) 2270, 2347
SsiI CCGC 5 cut(s) 550, 1169, 1649, 1946, 2040
SspMI CTAG 6 cut(s) 282, 320, 1497, 1784, 2138, 2240
StuI AGGCCT 2 cut(s) 2270, 2347
StyD4I CCNGG 1 cut(s) 481
StyI CCWWGG 2 cut(s) 281, 2271
TaiI ACGT 2 cut(s) 2207, 2229
TaqI TCGA 8 cut(s) 206, 767, 1520, 1641, 1683, 1962, 2281, 2388
TatI WGTACW 4 cut(s) 116, 1402, 1896, 2115
TauI GCSGC 1 cut(s) 1948
TfiI GAWTC 4 cut(s) 738, 1397, 1735, 2020
Tru1I TTAA 6 cut(s) 327, 1287, 1428, 1439, 1695, 2201
Tru9I TTAA 6 cut(s) 327, 1287, 1428, 1439, 1695, 2201
TscAI CASTG 6 cut(s) 12, 48, 850, 949, 1981, 2295
TseFI GTSAC 2 cut(s) 1760, 1934
TseI GCWGC 7 cut(s) 559, 1035, 1075, 1150, 1549, 1914, 2134
Tsp45I GTSAC 2 cut(s) 1760, 1934
TspDTI ATGAA 7 cut(s) 410, 1291, 1459, 1557, 1920, 2033, 2274
TspGWI ACGGA 3 cut(s) 37, 656, 1589
TspRI CASTG 6 cut(s) 12, 48, 850, 949, 1981, 2295
Vha464I CTTAAG 1 cut(s) 1438
VpaK11BI GGWCC 1 cut(s) 1082
XapI RAATTY 1 cut(s) 1522
XceI RCATGY 1 cut(s) 712
XmaJI CCTAGG 1 cut(s) 281
XmiI GTMKAC 2 cut(s) 520, 878
XmnI GAANNNNTTC 1 cut(s) 839
XspI CTAG 6 cut(s) 282, 320, 1497, 1784, 2138, 2240
ZrmI AGTACT 1 cut(s) 1404
Zsp2I ATGCAT 1 cut(s) 253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.