MD11G1021300.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
1833349 .. 1834214
866 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1021300.v1.1.491

Sequence Viewer

Length: 819 bp
ATGCAAATTGGTTCTGGTGTCGAAGTGGCGGTGAAGAAGCTAAACTGCTTTACGGGCGATACGGTGGATGTCGAGAAGGAGTTTAAAACAGAATTGACTGTAATTGGTCACACGCATCACAAGAATCTGGTTCGTCTTTTTGGATATTGTGACGAGGGGCAACAGAGATTACTAGTTTATGAGTTCTTGAGCAATGGCACATTGGCAAGCTTTCTTTTTTCTGATATCAAATCGAGTTGGAGACAGCGAATTGAAATCGCTGATGGCGTTGCCAAGGGGCTTTTGTACTTGCATGAAGAGTGCCGCACGCAGATTATCCATTGTGACATAAAGCCGCAGAACATACTTCTCGATGATTATTACACCCCTCTGATCTCTGATTTTGGATTGGCAAAACTTTTGCTGATGAATCAGAGCCAGACTCTTACCGCCATCCGAGGAACAAGAGGTTATGTTGCACCTGAGTGGTTCAGGAGCTTGCCAATCACCACCAAAGTTGATGTATACAGCTTTGGTGTTGTGTTGCTGGAGATCATTTGTTGTAGGAGAAGCGTTGACAATGAAGGTAATTGTGTAGAGAAAGCAATTTTAACATACTGGGTTTATGATTGCTACATTGAAGGAGAACTAGATGCTGTTGTAGATCATGAAGTCGAGGCCTTGGGTGATCGAACGACACTGGAAAAGTTCGTGATGGTTGCGCTTTGGTGTACTCAAGAAGATCCATCTCTGAGGCCTACTATGATGAAGGTTGTGCAGATGCTTGAAGGAGTTGCCGAAGTGCCTGTTCCGCCATGTCCATCCCCATATACCAGATAA

Protein Analysis

273

Amino Acids

30.83

Weight (kDa)

5.05

Isoelectric Point (pI)

33.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 5 - 253 1.1e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 6 - 255 1.1e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 504
AciI CCGC 5 cut(s) 29, 304, 335, 429, 791
AclWI GGATC 1 cut(s) 716
AfaI GTAC 2 cut(s) 287, 712
AgsI TTSAA 3 cut(s) 254, 620, 767
AhlI ACTAGT 1 cut(s) 172
AleI CACNNNNGTG 1 cut(s) 463
AluBI AGCT 4 cut(s) 40, 210, 477, 510
AluI AGCT 4 cut(s) 40, 210, 477, 510
Alw26I GTCTC 1 cut(s) 235
AlwI GGATC 1 cut(s) 716
AoxI GGCC 2 cut(s) 657, 734
AspLEI GCGC 1 cut(s) 703
AsuHPI GGTGA 3 cut(s) 43, 478, 677
BccI CCATC 5 cut(s) 257, 440, 688, 733, 808
BcoDI GTCTC 1 cut(s) 235
BcuI ACTAGT 1 cut(s) 172
BfaI CTAG 2 cut(s) 173, 629
BisI GCNGC 2 cut(s) 304, 335
BlsI GCNGC 2 cut(s) 305, 336
BmrI ACTGGG 1 cut(s) 607
BmsI GCATC 3 cut(s) 124, 622, 750
BmuI ACTGGG 1 cut(s) 607
BplI GAGNNNNNCTC 2 cut(s) 406, 438
BpmI CTGGAG 1 cut(s) 548
BpuEI CTTGAG 2 cut(s) 208, 699
BsaJI CCNNGG 3 cut(s) 273, 436, 660
Bse1I ACTGG 2 cut(s) 602, 684
Bse3DI GCAATG 1 cut(s) 199
BseDI CCNNGG 3 cut(s) 273, 436, 660
BseGI GGATG 3 cut(s) 73, 432, 800
BseMI GCAATG 1 cut(s) 199
BseMII CTCAG 2 cut(s) 453, 722
BseNI ACTGG 2 cut(s) 602, 684
BsgI GTGCAG 1 cut(s) 776
BshFI GGCC 2 cut(s) 659, 736
BsmAI GTCTC 1 cut(s) 235
BsnI GGCC 2 cut(s) 659, 736
Bsp143I GATC 5 cut(s) 372, 531, 643, 667, 721
BspACI CCGC 5 cut(s) 29, 304, 335, 429, 791
BspANI GGCC 2 cut(s) 659, 736
BspCNI CTCAG 2 cut(s) 454, 723
BspHI TCATGA 1 cut(s) 646
BspPI GGATC 1 cut(s) 716
BsrDI GCAATG 1 cut(s) 199
BsrI ACTGG 2 cut(s) 602, 684
BssECI CCNNGG 3 cut(s) 273, 436, 660
BssMI GATC 5 cut(s) 372, 531, 643, 667, 721
BssNAI GTATAC 1 cut(s) 505
BssT1I CCWWGG 2 cut(s) 273, 660
Bst1107I GTATAC 1 cut(s) 505
Bst4CI ACNGT 2 cut(s) 64, 100
Bst6I CTCTTC 1 cut(s) 291
BstC8I GCNNGC 3 cut(s) 208, 308, 479
BstDEI CTNAG 2 cut(s) 462, 731
BstF5I GGATG 3 cut(s) 73, 432, 800
BstHHI GCGC 1 cut(s) 703
BstKTI GATC 5 cut(s) 375, 534, 646, 670, 724
BstMAI GTCTC 1 cut(s) 235
BstMBI GATC 5 cut(s) 372, 531, 643, 667, 721
BstMWI GCNNNNNNNGC 2 cut(s) 54, 790
BstX2I RGATCY 1 cut(s) 721
BstYI RGATCY 1 cut(s) 721
BstZ17I GTATAC 1 cut(s) 505
BsuRI GGCC 2 cut(s) 659, 736
BtsCI GGATG 3 cut(s) 73, 432, 800
BtsIMutI CAGTG 1 cut(s) 677
Cac8I GCNNGC 3 cut(s) 208, 308, 479
CciI TCATGA 1 cut(s) 646
CfoI GCGC 1 cut(s) 703
Csp6I GTAC 2 cut(s) 286, 711
CspCI CAANNNNNGTGG 2 cut(s) 478, 513
CviAII CATG 3 cut(s) 293, 647, 795
CviJI RGCY 9 cut(s) 40, 210, 280, 334, 417, 477, 510, 659, 736
CviKI_1 RGCY 9 cut(s) 40, 210, 280, 334, 417, 477, 510, 659, 736
CviQI GTAC 2 cut(s) 286, 711
DdeI CTNAG 2 cut(s) 462, 731
DpnI GATC 5 cut(s) 374, 533, 645, 669, 723
DpnII GATC 5 cut(s) 372, 531, 643, 667, 721
DraI TTTAAA 1 cut(s) 85
Eam1104I CTCTTC 1 cut(s) 291
EarI CTCTTC 1 cut(s) 291
EciI GGCGGA 1 cut(s) 780
Eco130I CCWWGG 2 cut(s) 273, 660
Eco147I AGGCCT 2 cut(s) 659, 736
Eco32I GATATC 1 cut(s) 226
EcoRV GATATC 1 cut(s) 226
EcoT14I CCWWGG 2 cut(s) 273, 660
ErhI CCWWGG 2 cut(s) 273, 660
FaeI CATG 3 cut(s) 296, 650, 798
FatI CATG 3 cut(s) 292, 646, 794
FblI GTMKAC 1 cut(s) 504
Fnu4HI GCNGC 2 cut(s) 304, 335
FokI GGATG 3 cut(s) 80, 419, 787
Fsp4HI GCNGC 2 cut(s) 304, 335
FspBI CTAG 2 cut(s) 173, 629
GlaI GCGC 1 cut(s) 702
GluI GCNGC 2 cut(s) 304, 335
GsuI CTGGAG 1 cut(s) 548
HaeIII GGCC 2 cut(s) 659, 736
HhaI GCGC 1 cut(s) 703
Hin1II CATG 3 cut(s) 296, 650, 798
Hin6I GCGC 1 cut(s) 701
HinP1I GCGC 1 cut(s) 701
HincII GTYRAC 1 cut(s) 556
HindII GTYRAC 1 cut(s) 556
HindIII AAGCTT 1 cut(s) 208
HinfI GANTC 3 cut(s) 124, 409, 421
HphI GGTGA 3 cut(s) 43, 478, 677
Hpy166II GTNNAC 3 cut(s) 505, 556, 711
Hpy188I TCNGA 6 cut(s) 223, 372, 379, 414, 437, 732
Hpy188III TCNNGA 7 cut(s) 73, 187, 350, 472, 647, 691, 716
Hpy8I GTNNAC 3 cut(s) 505, 556, 711
HpyAV CCTTC 5 cut(s) 70, 557, 614, 742, 761
HpyCH4III ACNGT 2 cut(s) 64, 100
HpyCH4V TGCA 4 cut(s) 4, 292, 458, 757
HpyF10VI GCNNNNNNNGC 2 cut(s) 54, 790
HpyF3I CTNAG 2 cut(s) 462, 731
Hsp92II CATG 3 cut(s) 296, 650, 798
HspAI GCGC 1 cut(s) 701
Kzo9I GATC 5 cut(s) 372, 531, 643, 667, 721
LmnI GCTCC 1 cut(s) 474
LpnPI CCDG 8 cut(s) 113, 431, 457, 474, 512, 583, 665, 798
LweI GCATC 3 cut(s) 124, 622, 750
MaeI CTAG 2 cut(s) 173, 629
MaeIII GTNAC 3 cut(s) 107, 149, 323
MalI GATC 5 cut(s) 374, 533, 645, 669, 723
MboI GATC 5 cut(s) 372, 531, 643, 667, 721
MboII GAAGA 3 cut(s) 46, 308, 731
MflI RGATCY 1 cut(s) 721
MluCI AATT 6 cut(s) 6, 92, 102, 249, 568, 585
MlyI GAGTC 1 cut(s) 415
MmeI TCCRAC 1 cut(s) 218
MnlI CCTC 6 cut(s) 148, 378, 431, 440, 649, 726
MseI TTAA 2 cut(s) 84, 590
MslI CAYNNNNRTG 1 cut(s) 463
MwoI GCNNNNNNNGC 2 cut(s) 54, 790
NdeII GATC 5 cut(s) 372, 531, 643, 667, 721
NlaIII CATG 3 cut(s) 296, 650, 798
NmuCI GTSAC 3 cut(s) 107, 149, 323
OliI CACNNNNGTG 1 cut(s) 463
PagI TCATGA 1 cut(s) 646
PceI AGGCCT 2 cut(s) 659, 736
PcsI WCGNNNNNNNCGW 1 cut(s) 264
PfeI GAWTC 2 cut(s) 124, 409
PkrI GCNGC 2 cut(s) 305, 336
PleI GAGTC 1 cut(s) 415
PpsI GAGTC 1 cut(s) 415
PsuI RGATCY 1 cut(s) 721
RsaI GTAC 2 cut(s) 287, 712
RsaNI GTAC 2 cut(s) 286, 711
RseI CAYNNNNRTG 1 cut(s) 463
SaqAI TTAA 2 cut(s) 84, 590
SatI GCNGC 2 cut(s) 304, 335
Sau3AI GATC 5 cut(s) 372, 531, 643, 667, 721
SchI GAGTC 1 cut(s) 415
SetI ASST 8 cut(s) 42, 212, 451, 463, 479, 512, 568, 753
SfaNI GCATC 3 cut(s) 124, 622, 750
SmiMI CAYNNNNRTG 1 cut(s) 463
SmlI CTYRAG 2 cut(s) 187, 714
SmoI CTYRAG 2 cut(s) 187, 714
SpeI ACTAGT 1 cut(s) 172
Sse9I AATT 6 cut(s) 6, 92, 102, 249, 568, 585
SseBI AGGCCT 2 cut(s) 659, 736
SsiI CCGC 5 cut(s) 29, 304, 335, 429, 791
SspMI CTAG 2 cut(s) 173, 629
StuI AGGCCT 2 cut(s) 659, 736
StyI CCWWGG 2 cut(s) 273, 660
TaaI ACNGT 2 cut(s) 64, 100
TaqI TCGA 6 cut(s) 21, 72, 233, 351, 654, 670
TasI AATT 6 cut(s) 6, 92, 102, 249, 568, 585
TatI WGTACW 2 cut(s) 285, 710
TauI GCSGC 2 cut(s) 306, 337
TfiI GAWTC 2 cut(s) 124, 409
Tru1I TTAA 2 cut(s) 84, 590
Tru9I TTAA 2 cut(s) 84, 590
TscAI CASTG 1 cut(s) 684
TseFI GTSAC 3 cut(s) 107, 149, 323
Tsp45I GTSAC 3 cut(s) 107, 149, 323
TspDTI ATGAA 5 cut(s) 309, 422, 576, 663, 761
TspRI CASTG 1 cut(s) 684
XmiI GTMKAC 1 cut(s) 504
XspI CTAG 2 cut(s) 173, 629
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.