Rh5DG550200

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
84564477 .. 84567879
3403 bp
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UTR
Exon/CDS
Intron
Rh5DG550200.1

Sequence Viewer

Length: 2424 bp
ATGCAAATGGCTTTTACTGCACGGCTGCTTCTGCTTATTTCCTCTTTGTTTCTGGTCCTAGAATCTCTGTTTGCCCAAACTAATAGTGGCAAAGTAGCTGTGGGCGCTTCCCTCTCTGCAACTGCAGGCAACAGCTCCTCATGGCTTTCTCCTTCTGGTGATTTCGCCTTTGGTTTTCGACAACTTGAAAACAGTGATCTTTTCTTGCTTTCTGTATGGTATTCCAAGATTCCAGACAGAACCATAGTTTGGTATGCAAATGGGGATAGTCCTGCAGTTGTAGCTAAGGGCTCACTTGTGAATTTGACAGCTGACAACGGACTAGTGCTTACAAGTCCTCAGGGTGTTCAGCTTTGGAAATCTGAGTCAATTTCTGGAGTCGTTGCCTTCGGGGTCTTGAATAATACAGGCAACTTTGTCCTTGAAGATGACAATTCAGAGAGTTTATGGGAGACCTTCAGTAATCCAACTCATACCATTTTACCTGGGCAGGATATCGGAAAAGGAGGGAAGCTTTGGTCTCAACAATCCGAGACTAACTTTTCAAAAGGAAGATTCGAGCTGCGTATGCAAGATGATGGCAATCTTGTGCTTACCACCATAAACTTGCCAACTGAGTTTGCCAACGCGCCTTATTATGCAAGTGACACTACCGGTGATTCAAATTCTTCTACTGCTGGTACAAAGCTGGAGTTCAATAGCTCAGGCTACATGTATGTTCTAAGAGAGAACGGTGAGAAACTGTCCATCAAAGAAGCAGAGACAGTCTCAACTGGGAGCTTTTATCTTAGAGCAACCCTCAACTTTGATGGGGTTTTTGCTCAATACTCTCACCCGAAAAATTCCCTTGGTAATGTAAGCTGGAGTCTTGTTTGGTCAGTGCCAGATAACATATGCAATATGCTGGTTGATTCAGGTCTTGGTGTATGTGGCTACAACAGTATCTGCACTCTCCAAGATCAGAGGCCAACCTGTGCATGCCCAACAAGATACTCTTTATTGGATCCGAAAGATCCGTATGGGAATTGCAAGCCGGATTTCATACAAGGCTGTGAGGAAGATAAGCTAACTGTTACAAAAGATCTATATGAAGTTCAGATGCTGACAAACACTGATTGGCCAACCTCAGACTATATGCAATTGAAGCCTTATACTGCAGAAAGGTGCAATGAATCTTGCTTTGGAGATTGTTTGTGTGCTGTTGCTATTTTCAGAAATCAAACCTGTTGGAAAAAGAAGTTACCACTTTCAAATGGGAGAGTGGATAGCAGGCTTAATTCACAAGCCTTCATCAAAGTCAGGAAGGGTAATTCAACCCTACCAGTTCCTCAAACACCAAATCCGGATGACAAGAAGAGGAAGAACCAGACCACTTTAATACGCGCTGGATCAGCACTTCTTGGTACCTCAATCTTTGCAAACTTAATGTTAAGTGCTATAGTTTGTATGGGATTTTTCTTCATTTACCAGAAAAAACATGTGAGGCCTAATCAAAATGTTTTGGACTCGAATTTGCGGTATTTTAGTTATGAAGAGCTTAAAGAAGCAACAAATGGATTTAATGAAGAATTAGGAAAGGGTGCTTTTGGAGTTGTTTACAAAGGAATATTGCAAATTGGTCCTGGTGTCCCAGTGGCAGTGAAGAAGCTAAATTTTGTGGTACAAGATAGTGAAAAAGAATTCAAGACGGAATTGAACATAATTGGTCAGACACATCACAAGAATCTGGTTAGACTTGTTGGATATTGTGATGAGGGCCAAGAACGGTTACTAGTATATGAGTTCTTGAGCAATGGCACATTAGCAAACTTTCTTTTTGCTGGTACAAAACCAAGCTGGAAGCAAAGGATTGATATTGCTTATGGAGTTGCTAAGGGACTGCTGTACCTACATGAAGAGTGCAGCACCCAGATCATCCATTGTGACATTAAGCCTCAGAACATTCTTCTAGATGATTACCACAATGCTCGGATAGCTGACTTTGGATTGGCAAAGCTTTTAATGATGAATCAGAGCCAGACTCAAACTGCCATAAGAGGAACAAAAGGGTATGTTGCACCTGAGTGGTTCCGGAACCTGCCAATCACTACCAAAGTTGATGTGTATAGCTTTGGTGTGGTGCTGCTAGAGGCCATTTGCTGCAGGAGAAGCGTTGATATGGAAAATGTTTCCGAAGAGAGAGCCATTTTAACCGATTGGGTCTATGACTGCTTCCTCGAAGGAGACTTGGACGCGATTGTTGACAACGAAATGGAGGCGTTGCATGAGAAAACAAAGCTGGAAAGGTTTGTCATGGTTGCTCTTTGGTGTATCCAGGAAGACCCTTCTCTTCGACCCACTATGAGGAAGGTTGTGCAGATGCTTGAAGGAGTAGTGGAAGTACATGTTCCACCATGTCCATCACCTTACAGCAGAGCAAGCTGA

Protein Analysis

807

Amino Acids

89.81

Weight (kDa)

5.48

Isoelectric Point (pI)

31.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 81 - 168 1.4e-13 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 520 - 788 1e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 521 - 786 9.1e-49 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2085
Acc65I GGTACC 1 cut(s) 1403
AccB1I GGYRCC 1 cut(s) 1403
AccB7I CCANNNNNTGG 1 cut(s) 249
AccII CGCG 3 cut(s) 629, 1383, 2234
AccIII TCCGGA 2 cut(s) 1342, 2070
AciI CCGC 1 cut(s) 1516
AclWI GGATC 4 cut(s) 998, 1007, 1011, 1396
AcoI YGGCCR 1 cut(s) 1118
AcsI RAATTY 6 cut(s) 301, 664, 841, 1510, 1651, 1679
AcuI CTGAAG 1 cut(s) 442
AfaI GTAC 6 cut(s) 682, 1405, 1662, 1825, 1886, 2382
AfiI CCNNNNNNNGG 2 cut(s) 249, 2343
AflIII ACRYGT 3 cut(s) 711, 1477, 2383
AgeI ACCGGT 1 cut(s) 653
AhlI ACTAGT 2 cut(s) 322, 1771
AjnI CCWGG 3 cut(s) 484, 1621, 2313
AjuI GAANNNNNNNTTGG 4 cut(s) 232, 264, 1164, 1196
AleI CACNNNNGTG 1 cut(s) 2062
Alw26I GTCTC 6 cut(s) 446, 525, 527, 755, 772, 2217
AlwI GGATC 4 cut(s) 998, 1007, 1011, 1396
AlwNI CAGNNNCTG 2 cut(s) 945, 1102
Aor13HI TCCGGA 2 cut(s) 1342, 2070
AoxI GGCC 5 cut(s) 965, 1118, 1484, 1756, 2130
ApeKI GCWGC 5 cut(s) 25, 562, 1902, 2122, 2139
ApoI RAATTY 6 cut(s) 301, 664, 841, 1510, 1651, 1679
AsiGI ACCGGT 1 cut(s) 653
Asp718I GGTACC 1 cut(s) 1403
AspLEI GCGC 3 cut(s) 107, 631, 1385
AspS9I GGNCC 3 cut(s) 55, 1619, 1756
AsuHPI GGTGA 5 cut(s) 170, 668, 746, 824, 2394
AvaII GGWCC 2 cut(s) 55, 1619
AxyI CCTNAGG 1 cut(s) 339
BaeI ACNNNNGTAYC 4 cut(s) 925, 958, 1868, 1901
BalI TGGCCA 1 cut(s) 1120
BamHI GGATCC 1 cut(s) 1003
BanI GGYRCC 1 cut(s) 1403
BanII GRGCYC 1 cut(s) 293
BbsI GAAGAC 1 cut(s) 2325
BbvI GCAGC 5 cut(s) 12, 549, 1914, 2109, 2126
BccI CCATC 4 cut(s) 572, 755, 803, 2407
BceAI ACGGC 1 cut(s) 38
BciT130I CCWGG 3 cut(s) 486, 1623, 2315
BciVI GTATCC 1 cut(s) 2321
BcoDI GTCTC 6 cut(s) 446, 525, 527, 755, 772, 2217
BcuI ACTAGT 2 cut(s) 322, 1771
BfaI CTAG 5 cut(s) 59, 323, 1772, 1949, 2126
BfmI CTRYAG 5 cut(s) 123, 273, 1155, 1437, 2140
BfoI RGCGCY 1 cut(s) 108
BfuAI ACCTGC 1 cut(s) 2085
BfuI GTATCC 1 cut(s) 2321
BglII AGATCT 1 cut(s) 1081
BisI GCNGC 5 cut(s) 26, 563, 1903, 2123, 2140
BlsI GCNGC 5 cut(s) 27, 564, 1904, 2124, 2141
Bme1390I CCNGG 3 cut(s) 486, 1623, 2315
Bme18I GGWCC 2 cut(s) 55, 1619
BmgT120I GGNCC 3 cut(s) 55, 1619, 1756
BmiI GGNNCC 4 cut(s) 1005, 1405, 2069, 2075
BmrFI CCNGG 3 cut(s) 486, 1623, 2315
BmrI ACTGGG 2 cut(s) 783, 1625
BmsI GCATC 2 cut(s) 1089, 2349
BmuI ACTGGG 2 cut(s) 783, 1625
BpiI GAAGAC 1 cut(s) 2325
BplI GAGNNNNNCTC 6 cut(s) 752, 784, 783, 815, 2005, 2037
BpmI CTGGAG 3 cut(s) 396, 710, 883
Bpu10I CCTNAGC 3 cut(s) 285, 703, 1872
BpuEI CTTGAG 1 cut(s) 1807
BsaBI GATNNNNATC 1 cut(s) 582
BsaI GGTCTC 2 cut(s) 446, 525
BsaJI CCNNGG 2 cut(s) 485, 847
BsaWI WCCGGW 3 cut(s) 653, 1342, 2070
Bsc4I CCNNNNNNNGG 2 cut(s) 249, 2343
Bse118I RCCGGY 1 cut(s) 653
Bse1I ACTGG 3 cut(s) 778, 1322, 1631
Bse21I CCTNAGG 1 cut(s) 339
Bse3DI GCAATG 2 cut(s) 1174, 1798
Bse8I GATNNNNATC 1 cut(s) 582
BseAI TCCGGA 2 cut(s) 1342, 2070
BseBI CCWGG 3 cut(s) 486, 1623, 2315
BseDI CCNNGG 2 cut(s) 485, 847
BseGI GGATG 2 cut(s) 1351, 1914
BseJI GATNNNNATC 1 cut(s) 582
BseLI CCNNNNNNNGG 2 cut(s) 249, 2343
BseMI GCAATG 2 cut(s) 1174, 1798
BseMII CTCAG 7 cut(s) 353, 354, 606, 717, 1140, 1949, 2052
BseNI ACTGG 3 cut(s) 778, 1322, 1631
BseRI GAGGAG 1 cut(s) 127
BseXI GCAGC 5 cut(s) 12, 549, 1914, 2109, 2126
BsgI GTGCAG 3 cut(s) 931, 1921, 2375
Bsh1236I CGCG 3 cut(s) 629, 1383, 2234
BshFI GGCC 5 cut(s) 967, 1120, 1486, 1758, 2132
BshNI GGYRCC 1 cut(s) 1403
BshTI ACCGGT 1 cut(s) 653
BsiSI CCGG 4 cut(s) 654, 1034, 1343, 2071
BslFI GGGAC 2 cut(s) 1613, 1890
BslI CCNNNNNNNGG 2 cut(s) 249, 2343
BsmAI GTCTC 6 cut(s) 446, 525, 527, 755, 772, 2217
BsmFI GGGAC 2 cut(s) 1613, 1890
BsnI GGCC 5 cut(s) 967, 1120, 1486, 1758, 2132
Bso31I GGTCTC 2 cut(s) 446, 525
Bsp1286I GDGCHC 1 cut(s) 293
Bsp13I TCCGGA 2 cut(s) 1342, 2070
Bsp143I GATC 7 cut(s) 196, 958, 1003, 1012, 1081, 1388, 1911
BspACI CCGC 1 cut(s) 1516
BspANI GGCC 5 cut(s) 967, 1120, 1486, 1758, 2132
BspCNI CTCAG 7 cut(s) 352, 355, 607, 716, 1139, 1948, 2053
BspEI TCCGGA 2 cut(s) 1342, 2070
BspFNI CGCG 3 cut(s) 629, 1383, 2234
BspLI GGNNCC 4 cut(s) 1005, 1405, 2069, 2075
BspMAI CTGCAG 4 cut(s) 127, 277, 1159, 2144
BspMI ACCTGC 1 cut(s) 2085
BspPI GGATC 4 cut(s) 998, 1007, 1011, 1396
BspQI GCTCTTC 1 cut(s) 1527
BspT107I GGYRCC 1 cut(s) 1403
BspTNI GGTCTC 2 cut(s) 446, 525
BsrDI GCAATG 2 cut(s) 1174, 1798
BsrFI RCCGGY 1 cut(s) 653
BsrI ACTGG 3 cut(s) 778, 1322, 1631
BssAI RCCGGY 1 cut(s) 653
BssECI CCNNGG 2 cut(s) 485, 847
BssMI GATC 7 cut(s) 196, 958, 1003, 1012, 1081, 1388, 1911
BssT1I CCWWGG 1 cut(s) 847
Bst2UI CCWGG 3 cut(s) 486, 1623, 2315
Bst4CI ACNGT 7 cut(s) 194, 734, 744, 766, 941, 1072, 1767
Bst6I CTCTTC 5 cut(s) 1349, 1527, 1890, 2169, 2334
BstC8I GCNNGC 5 cut(s) 127, 979, 1031, 1271, 2419
BstF5I GGATG 2 cut(s) 1351, 1914
BstFNI CGCG 3 cut(s) 629, 1383, 2234
BstH2I RGCGCY 1 cut(s) 108
BstHHI GCGC 3 cut(s) 107, 631, 1385
BstKTI GATC 7 cut(s) 199, 961, 1006, 1015, 1084, 1391, 1914
BstMAI GTCTC 6 cut(s) 446, 525, 527, 755, 772, 2217
BstMBI GATC 7 cut(s) 196, 958, 1003, 1012, 1081, 1388, 1911
BstNI CCWGG 3 cut(s) 486, 1623, 2315
BstNSI RCATGY 4 cut(s) 715, 981, 1481, 2387
BstSCI CCNGG 3 cut(s) 484, 1621, 2313
BstSFI CTRYAG 5 cut(s) 123, 273, 1155, 1437, 2140
BstUI CGCG 3 cut(s) 629, 1383, 2234
BstV1I GCAGC 5 cut(s) 12, 549, 1914, 2109, 2126
BstV2I GAAGAC 1 cut(s) 2325
BstX2I RGATCY 3 cut(s) 1003, 1012, 1081
BstYI RGATCY 3 cut(s) 1003, 1012, 1081
Bsu36I CCTNAGG 1 cut(s) 339
BsuI GTATCC 1 cut(s) 2321
BsuRI GGCC 5 cut(s) 967, 1120, 1486, 1758, 2132
BtsCI GGATG 2 cut(s) 1351, 1914
BtsI GCAGTG 1 cut(s) 1644
BtsIMutI CAGTG 5 cut(s) 199, 885, 1110, 1638, 1644
BveI ACCTGC 1 cut(s) 2085
Cac8I GCNNGC 5 cut(s) 127, 979, 1031, 1271, 2419
CaiI CAGNNNCTG 2 cut(s) 945, 1102
CfoI GCGC 3 cut(s) 107, 631, 1385
Cfr10I RCCGGY 1 cut(s) 653
Cfr13I GGNCC 3 cut(s) 55, 1619, 1756
CseI GACGC 1 cut(s) 2240
Csp6I GTAC 6 cut(s) 681, 1404, 1661, 1824, 1885, 2381
CspAI ACCGGT 1 cut(s) 653
CviAII CATG 9 cut(s) 141, 712, 978, 1478, 1892, 2264, 2293, 2384, 2394
CviQI GTAC 6 cut(s) 681, 1404, 1661, 1824, 1885, 2381
DpnI GATC 7 cut(s) 198, 960, 1005, 1014, 1083, 1390, 1913
DpnII GATC 7 cut(s) 196, 958, 1003, 1012, 1081, 1388, 1911
EaeI YGGCCR 1 cut(s) 1118
Eam1104I CTCTTC 5 cut(s) 1349, 1527, 1890, 2169, 2334
EarI CTCTTC 5 cut(s) 1349, 1527, 1890, 2169, 2334
Eco130I CCWWGG 1 cut(s) 847
Eco147I AGGCCT 1 cut(s) 1486
Eco24I GRGCYC 1 cut(s) 293
Eco31I GGTCTC 2 cut(s) 446, 525
Eco32I GATATC 1 cut(s) 496
Eco47I GGWCC 2 cut(s) 55, 1619
Eco57I CTGAAG 1 cut(s) 442
Eco81I CCTNAGG 1 cut(s) 339
EcoRI GAATTC 1 cut(s) 1679
EcoRII CCWGG 3 cut(s) 484, 1621, 2313
EcoRV GATATC 1 cut(s) 496
EcoT14I CCWWGG 1 cut(s) 847
EcoT38I GRGCYC 1 cut(s) 293
ErhI CCWWGG 1 cut(s) 847
FaeI CATG 9 cut(s) 144, 715, 981, 1481, 1895, 2267, 2296, 2387, 2397
FalI AAGNNNNNCTT 2 cut(s) 979, 1011
FaqI GGGAC 2 cut(s) 1613, 1890
FatI CATG 9 cut(s) 140, 711, 977, 1477, 1891, 2263, 2292, 2383, 2393
FauNDI CATATG 1 cut(s) 893
Fnu4HI GCNGC 5 cut(s) 26, 563, 1903, 2123, 2140
FokI GGATG 2 cut(s) 1358, 1901
FriOI GRGCYC 1 cut(s) 293
Fsp4HI GCNGC 5 cut(s) 26, 563, 1903, 2123, 2140
FspBI CTAG 5 cut(s) 59, 323, 1772, 1949, 2126
GlaI GCGC 3 cut(s) 106, 630, 1384
GluI GCNGC 5 cut(s) 26, 563, 1903, 2123, 2140
GsuI CTGGAG 3 cut(s) 396, 710, 883
HaeII RGCGCY 1 cut(s) 108
HaeIII GGCC 5 cut(s) 967, 1120, 1486, 1758, 2132
HapII CCGG 4 cut(s) 654, 1034, 1343, 2071
HgaI GACGC 1 cut(s) 2240
HhaI GCGC 3 cut(s) 107, 631, 1385
Hin1II CATG 9 cut(s) 144, 715, 981, 1481, 1895, 2267, 2296, 2387, 2397
Hin6I GCGC 3 cut(s) 105, 629, 1383
HinP1I GCGC 3 cut(s) 105, 629, 1383
HincII GTYRAC 1 cut(s) 2242
HindII GTYRAC 1 cut(s) 2242
HindIII AAGCTT 2 cut(s) 512, 1994
HpaII CCGG 4 cut(s) 654, 1034, 1343, 2071
HphI GGTGA 5 cut(s) 170, 668, 746, 824, 2394
Hpy166II GTNNAC 2 cut(s) 1597, 2242
Hpy188III TCNNGA 9 cut(s) 233, 375, 397, 1300, 1343, 1684, 1786, 1949, 2071
Hpy8I GTNNAC 2 cut(s) 1597, 2242
HpyAV CCTTC 9 cut(s) 162, 397, 466, 1297, 1297, 2213, 2334, 2341, 2360
HpyCH4III ACNGT 7 cut(s) 194, 734, 744, 766, 941, 1072, 1767
Hsp92II CATG 9 cut(s) 144, 715, 981, 1481, 1895, 2267, 2296, 2387, 2397
HspAI GCGC 3 cut(s) 105, 629, 1383
Kpn2I TCCGGA 2 cut(s) 1342, 2070
KpnI GGTACC 1 cut(s) 1407
Kzo9I GATC 7 cut(s) 196, 958, 1003, 1012, 1081, 1388, 1911
LguI GCTCTTC 1 cut(s) 1527
LmnI GCTCC 2 cut(s) 140, 777
Lsp1109I GCAGC 5 cut(s) 12, 549, 1914, 2109, 2126
LweI GCATC 2 cut(s) 1089, 2349
MaeI CTAG 5 cut(s) 59, 323, 1772, 1949, 2126
MaeIII GTNAC 5 cut(s) 644, 1072, 1239, 1767, 1922
MalI GATC 7 cut(s) 198, 960, 1005, 1014, 1083, 1390, 1913
MboI GATC 7 cut(s) 196, 958, 1003, 1012, 1081, 1388, 1911
MfeI CAATTG 1 cut(s) 1139
MflI RGATCY 3 cut(s) 1003, 1012, 1081
MhlI GDGCHC 1 cut(s) 293
MlsI TGGCCA 1 cut(s) 1120
MluNI TGGCCA 1 cut(s) 1120
MlyI GAGTC 5 cut(s) 374, 387, 874, 1499, 2014
MmeI TCCRAC 3 cut(s) 491, 1208, 1720
Mox20I TGGCCA 1 cut(s) 1120
MroI TCCGGA 2 cut(s) 1342, 2070
MscI TGGCCA 1 cut(s) 1120
MseI TTAA 9 cut(s) 1275, 1376, 1424, 1430, 1539, 1560, 1929, 2000, 2189
MslI CAYNNNNRTG 1 cut(s) 2062
Msp20I TGGCCA 1 cut(s) 1120
MspA1I CMGCKG 1 cut(s) 311
MspI CCGG 4 cut(s) 654, 1034, 1343, 2071
MspR9I CCNGG 3 cut(s) 486, 1623, 2315
MunI CAATTG 1 cut(s) 1139
MvaI CCWGG 3 cut(s) 486, 1623, 2315
MvnI CGCG 3 cut(s) 629, 1383, 2234
NdeI CATATG 1 cut(s) 893
NdeII GATC 7 cut(s) 196, 958, 1003, 1012, 1081, 1388, 1911
NlaIII CATG 9 cut(s) 144, 715, 981, 1481, 1895, 2267, 2296, 2387, 2397
NlaIV GGNNCC 4 cut(s) 1005, 1405, 2069, 2075
NmuCI GTSAC 2 cut(s) 644, 1922
NspI RCATGY 4 cut(s) 715, 981, 1481, 2387
OliI CACNNNNGTG 1 cut(s) 2062
PaeI GCATGC 1 cut(s) 981
PceI AGGCCT 1 cut(s) 1486
PciI ACATGT 3 cut(s) 711, 1477, 2383
PciSI GCTCTTC 1 cut(s) 1527
PfeI GAWTC 8 cut(s) 62, 229, 555, 659, 911, 1172, 1723, 2008
PflMI CCANNNNNTGG 1 cut(s) 249
PfoI TCCNGGA 1 cut(s) 2313
PinAI ACCGGT 1 cut(s) 653
PkrI GCNGC 5 cut(s) 27, 564, 1904, 2124, 2141
PleI GAGTC 5 cut(s) 373, 386, 873, 1499, 2014
PpsI GAGTC 5 cut(s) 373, 386, 873, 1499, 2014
PscI ACATGT 3 cut(s) 711, 1477, 2383
Psp6I CCWGG 3 cut(s) 484, 1621, 2313
PspGI CCWGG 3 cut(s) 484, 1621, 2313
PspN4I GGNNCC 4 cut(s) 1005, 1405, 2069, 2075
PspPI GGNCC 3 cut(s) 55, 1619, 1756
PstI CTGCAG 4 cut(s) 127, 277, 1159, 2144
PstNI CAGNNNCTG 2 cut(s) 945, 1102
PsuI RGATCY 3 cut(s) 1003, 1012, 1081
PvuII CAGCTG 1 cut(s) 311
RsaI GTAC 6 cut(s) 682, 1405, 1662, 1825, 1886, 2382
RsaNI GTAC 6 cut(s) 681, 1404, 1661, 1824, 1885, 2381
RseI CAYNNNNRTG 1 cut(s) 2062
SapI GCTCTTC 1 cut(s) 1527
SaqAI TTAA 9 cut(s) 1275, 1376, 1424, 1430, 1539, 1560, 1929, 2000, 2189
SatI GCNGC 5 cut(s) 26, 563, 1903, 2123, 2140
Sau3AI GATC 7 cut(s) 196, 958, 1003, 1012, 1081, 1388, 1911
Sau96I GGNCC 3 cut(s) 55, 1619, 1756
SchI GAGTC 5 cut(s) 374, 387, 874, 1499, 2014
ScrFI CCNGG 3 cut(s) 486, 1623, 2315
SduI GDGCHC 1 cut(s) 293
SfaNI GCATC 2 cut(s) 1089, 2349
SfcI CTRYAG 5 cut(s) 123, 273, 1155, 1437, 2140
SinI GGWCC 2 cut(s) 55, 1619
SmiMI CAYNNNNRTG 1 cut(s) 2062
SmlI CTYRAG 1 cut(s) 1786
SmoI CTYRAG 1 cut(s) 1786
SpeI ACTAGT 2 cut(s) 322, 1771
SphI GCATGC 1 cut(s) 981
SseBI AGGCCT 1 cut(s) 1486
SsiI CCGC 1 cut(s) 1516
SspI AATATT 1 cut(s) 1608
SspMI CTAG 5 cut(s) 59, 323, 1772, 1949, 2126
StuI AGGCCT 1 cut(s) 1486
StyD4I CCNGG 3 cut(s) 484, 1621, 2313
StyI CCWWGG 1 cut(s) 847
TaaI ACNGT 7 cut(s) 194, 734, 744, 766, 941, 1072, 1767
TaqI TCGA 5 cut(s) 178, 558, 1508, 2217, 2332
TatI WGTACW 1 cut(s) 2380
TfiI GAWTC 8 cut(s) 62, 229, 555, 659, 911, 1172, 1723, 2008
Tru1I TTAA 9 cut(s) 1275, 1376, 1424, 1430, 1539, 1560, 1929, 2000, 2189
Tru9I TTAA 9 cut(s) 1275, 1376, 1424, 1430, 1539, 1560, 1929, 2000, 2189
TscAI CASTG 5 cut(s) 199, 885, 1117, 1638, 1644
TseFI GTSAC 2 cut(s) 644, 1922
TseI GCWGC 5 cut(s) 25, 562, 1902, 2122, 2139
Tsp45I GTSAC 2 cut(s) 644, 1922
TspDTI ATGAA 9 cut(s) 1030, 1104, 1185, 1279, 1450, 1545, 1578, 1908, 2021
TspGWI ACGGA 3 cut(s) 333, 1005, 1703
TspRI CASTG 5 cut(s) 199, 885, 1117, 1638, 1644
Van91I CCANNNNNTGG 1 cut(s) 249
VpaK11BI GGWCC 2 cut(s) 55, 1619
XapI RAATTY 6 cut(s) 301, 664, 841, 1510, 1651, 1679
XbaI TCTAGA 1 cut(s) 1948
XceI RCATGY 4 cut(s) 715, 981, 1481, 2387
XcmI CCANNNNNNNNNTGG 1 cut(s) 83
XspI CTAG 5 cut(s) 59, 323, 1772, 1949, 2126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.