MD05G1226600.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
35987269 .. 35990596
3328 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1226600.v1.1.491

Sequence Viewer

Length: 2265 bp
ATGGCAGTGGCTCTTTCTGTAGAGATGCTTTTGTTCTCCTCTTTGTTTTTGCTACCAATTTCTGTGATTTCCCAAAATAATGGAAGAGTAGCAGTTGGGAGTTCTCTAACTGCAACTACAGGCGACTCCTCATCATGGCTTTCTCCTTCCGGTGATTTCGCGTTTGGATTTTCGCCCCTCGGAAACAATGATCGTTTCTTGCTTTCGATATGGTATGCGAAAATCCCAGACAAAACCGTAGTTTGGTATGCATATGACGGTAACAACCCCATGGTTGCACCTAGGGGATCAGTTCTGAACTTGACTGCCAACAGTGGACTAGTTCTTAACAATCCTCAGGGTGGAGAGATATGGAAATCCGAAATAACCTTGGGGACTGTTGCGAACGGGGTCATGAATGACACCGGAAACTTCGTCCTTCAACACCAAAACTCGGGGAGCTTGTGGGAGACCTTCAGCAATCCTACAGACACCGTTTTGCCTGGACAGACAATTGAGAGAAACGGGACGCTTTCGTGTAGACAATCGGAGACTAACTACACAAAAGGGCGGTTCCGGCTGAGCTTGCAAGGTGATGGAAACCTCGTGCTCATTTCCGTCACAACAGATAATGCCAACATCCCTTACTTCTCCACGAAGACCACGTCAGGGAACGTGCCAGGTAGTCAAGGCAAACGATTGGTGTTCAGCAGCTCAGGGGACATGTTTGTTCTAAGAGAAAATGATGGAAGAGTCCCTCTTAAGGGGACAGAGGGAGTGTCGGTGAGGGACAACTACATAAGGGCAACTCTTGATTTTGATGGGATTTTCGCTTTATATTCTCACCAGAAAAACTTCACGGGAAATGCAAGTTGGATTAGTCCTCTGGTGTATATGCCGGATGATATTTGCCTACGACTGGGCGTTGGTGTTTGCGGTTACAACAGTACCTGTATGCTCAAACCAGATAAAAGGCCAACCTGCGAATGCCCAAAAGGGTTTTCTTTTCTTGATCCGAAGGATATATACCGAGGCTGCAAACCCGATTTGAGCCGGAAATCTGTGACACGCGTGGAATCAGTATTATTAGATAAATGGGTTTGGATTGGCATTTCTATAGCTGCTGCTCTAGTGCTTTGCACCGCGTACTATCTACTCCGACGAAGAAGATCAGCCCTTGCATCAGCTGGTGAGAACCGGACAACGCTTGAGAACGAAATGCTTATCTTCATGAAATCTAAGCGACATCATGATTTTAGCGTTTTTAGCTATTCATCCATCGTGGCTGCCACAAGAAACTTTGCTGAAGAAAACAAGCTAGGACAAGGAGGGTTTGGACCGGTTTATAAGGGGAAATTGGCAACGGGACAAGAAATAGCTGTGAAGAGGCTTTCGAAATGTTCAGGGCAAGGAACATCAGAATTCAAGAATGAACTGATACTTATATATGAACTCCAACATACAAACCTGGTTCACCTTTTCGGATTTTGCATTCATGGTGAAGAAATGATGTTGATATATGAGTATCTGCAGAACAAAAGTTTGGACCACTTTTTATTTGATCCAATCAGAGGTCTACTACTAGATTGGAAGAAGCGTTTTAGCATTCTCGAAGGAATTGCTCAAGGGTTGCTTTATCTGCACAAATACTCAAGAAAGAAAGTAATTCATAGAGATGTAAAAGCTAGTAACATACTACTTGATGAAAACATGAACCCAAAAATTTCAGATTTTGGTATGGCAAGGATTTTCACCCAAAATGAATTGGAAGCAAACACTAGAAAGGTTGCGGGGACACTTGGTTACATGCCTCCAGAGTCCGTGGGGGGAATTATTTCTGTAAAGTCTGATGTCTACAGTTTCGGGGTATTGATGCTTGAAATCATAAGTGGAAGGAAAAACAACAGCTTTTACAATGACGATCGCGCACTCAATTTAGTAGGATATGCATGGGAGTTATGGAAAAAAGGTGCAGGGCTAGAATTAACGGATCCAACATTAGGAAATTCGTTTATTAAAGAGCAACTGTTAAGATGCATCCATGTCGGTCTGCTTTGCGTAGAAGAAAATGCAGCAGATCGCCCTACCATGTCAGATGTCATATCTATGTTGACAAATGAAAGCTTTCCATTAGCATCACCAACAAAGCCAGCATTTTTTGTTGGAAGGAGGACGGTGGAGGCTGGTATAAGTGGGAATCAGCAACTTGAAACTGTTGCTTCAGCAAACTACAAGTCCAGTTCTGATTTTGAAGCGCGAGGTTATGCATCAACTGGAGTTGGCTGA

Protein Analysis

755

Amino Acids

83.17

Weight (kDa)

8.41

Isoelectric Point (pI)

34.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 79 - 170 4.4e-13 D-mannose binding lectin
Pkinase PF00069 428 - 629 2.8e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 430 - 638 3e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1326
Acc36I ACCTGC 1 cut(s) 968
AccI GTMKAC 3 cut(s) 520, 1555, 1833
AccII CGCG 5 cut(s) 161, 1050, 1124, 1905, 2236
AciI CCGC 4 cut(s) 550, 915, 1122, 1769
AclWI GGATC 5 cut(s) 295, 986, 1535, 1964, 1977
AcsI RAATTY 3 cut(s) 1400, 1701, 1984
AcuI CTGAAG 3 cut(s) 439, 1305, 2184
AfaI GTAC 2 cut(s) 928, 1127
AflII CTTAAG 1 cut(s) 740
AflIII ACRYGT 2 cut(s) 702, 1048
AgeI ACCGGT 1 cut(s) 1318
AgsI TTSAA 5 cut(s) 422, 1405, 1859, 2189, 2231
AhlI ACTAGT 1 cut(s) 319
AjiI CACGTC 1 cut(s) 645
AjnI CCWGG 3 cut(s) 481, 658, 1446
AjuI GAANNNNNNNTTGG 6 cut(s) 835, 867, 964, 996, 1505, 1537
Alw21I GWGCWC 1 cut(s) 591
Alw26I GTCTC 2 cut(s) 443, 524
AlwI GGATC 5 cut(s) 295, 986, 1535, 1964, 1977
AlwNI CAGNNNCTG 1 cut(s) 930
Ama87I CYCGRG 1 cut(s) 433
AoxI GGCC 1 cut(s) 953
ApeKI GCWGC 6 cut(s) 690, 1014, 1100, 1103, 1265, 2051
ApoI RAATTY 3 cut(s) 1400, 1701, 1984
ArsI GACNNNNNNTTYG 4 cut(s) 629, 661, 2198, 2230
AsiGI ACCGGT 1 cut(s) 1318
Asp700I GAANNNNTTC 3 cut(s) 833, 1813, 2103
AspA2I CCTAGG 1 cut(s) 281
AspLEI GCGC 2 cut(s) 1907, 2236
AspS9I GGNCC 2 cut(s) 1316, 1525
AsuHPI GGTGA 9 cut(s) 164, 584, 775, 815, 1181, 1445, 1490, 1723, 2109
AsuII TTCGAA 1 cut(s) 1373
AvaI CYCGRG 1 cut(s) 433
AvaII GGWCC 2 cut(s) 1316, 1525
AvrII CCTAGG 1 cut(s) 281
AxyI CCTNAGG 1 cut(s) 336
BaeI ACNNNNGTAYC 2 cut(s) 910, 943
BamHI GGATCC 1 cut(s) 1969
BarI GAAGNNNNNNTAC 2 cut(s) 989, 1021
BauI CACGAG 1 cut(s) 584
BbsI GAAGAC 1 cut(s) 644
Bbv12I GWGCWC 1 cut(s) 591
BbvI GCAGC 6 cut(s) 702, 1001, 1087, 1090, 1252, 2063
BccI CCATC 4 cut(s) 569, 719, 794, 1265
BcgI CGANNNNNNTGC 4 cut(s) 1580, 1614, 2005, 2039
BciT130I CCWGG 3 cut(s) 483, 660, 1448
BcoDI GTCTC 2 cut(s) 443, 524
BcuI ACTAGT 1 cut(s) 319
BfaI CTAG 8 cut(s) 282, 320, 1109, 1298, 1562, 1665, 1758, 1958
BfmI CTRYAG 6 cut(s) 18, 117, 465, 1095, 1508, 1834
BfrI CTTAAG 1 cut(s) 740
BfuAI ACCTGC 1 cut(s) 968
BisI GCNGC 6 cut(s) 691, 1015, 1101, 1104, 1266, 2052
BlnI CCTAGG 1 cut(s) 281
BlpI GCTNAGC 1 cut(s) 560
BlsI GCNGC 6 cut(s) 692, 1016, 1102, 1105, 1267, 2053
Bme1390I CCNGG 3 cut(s) 483, 660, 1448
Bme18I GGWCC 2 cut(s) 1316, 1525
BmeT110I CYCGRG 1 cut(s) 433
BmgBI CACGTC 1 cut(s) 645
BmgT120I GGNCC 2 cut(s) 1316, 1525
BmiI GGNNCC 2 cut(s) 554, 1971
BmrFI CCNGG 3 cut(s) 483, 660, 1448
BmrI ACTGGG 1 cut(s) 908
BmsI GCATC 7 cut(s) 15, 1169, 1842, 2003, 2025, 2123, 2255
BmuI ACTGGG 1 cut(s) 908
BpiI GAAGAC 1 cut(s) 644
BpmI CTGGAG 1 cut(s) 1776
Bpu10I CCTNAGC 1 cut(s) 694
Bpu1102I GCTNAGC 1 cut(s) 560
Bpu14I TTCGAA 1 cut(s) 1373
BpuEI CTTGAG 3 cut(s) 1208, 1587, 1615
BsaI GGTCTC 1 cut(s) 443
BsaJI CCNNGG 6 cut(s) 178, 270, 281, 369, 1009, 1800
BsaWI WCCGGW 4 cut(s) 149, 404, 1176, 1318
BsaXI ACNNNNNCTCC 2 cut(s) 747, 777
Bse118I RCCGGY 1 cut(s) 1318
Bse1I ACTGG 3 cut(s) 903, 2217, 2257
Bse21I CCTNAGG 1 cut(s) 336
BseBI CCWGG 3 cut(s) 483, 660, 1448
BseDI CCNNGG 6 cut(s) 178, 270, 281, 369, 1009, 1800
BseGI GGATG 4 cut(s) 618, 886, 1253, 2016
BseMII CTCAG 3 cut(s) 350, 551, 708
BseNI ACTGG 3 cut(s) 903, 2217, 2257
BseRI GAGGAG 2 cut(s) 28, 118
BseXI GCAGC 6 cut(s) 702, 1001, 1087, 1090, 1252, 2063
BsgI GTGCAG 2 cut(s) 1604, 1971
Bsh1236I CGCG 5 cut(s) 161, 1050, 1124, 1905, 2236
Bsh1285I CGRYCG 1 cut(s) 1903
BshFI GGCC 1 cut(s) 955
BshTI ACCGGT 1 cut(s) 1318
BsiEI CGRYCG 1 cut(s) 1903
BsiHKAI GWGCWC 1 cut(s) 591
BsiHKCI CYCGRG 1 cut(s) 433
BsiSI CCGG 7 cut(s) 150, 405, 556, 878, 1033, 1177, 1319
BslFI GGGAC 8 cut(s) 388, 520, 713, 719, 760, 782, 1359, 1786
BsmAI GTCTC 2 cut(s) 443, 524
BsmFI GGGAC 8 cut(s) 388, 520, 713, 719, 760, 782, 1359, 1786
BsmI GAATGC 3 cut(s) 971, 1470, 1584
BsnI GGCC 1 cut(s) 955
Bso31I GGTCTC 1 cut(s) 443
BsoBI CYCGRG 1 cut(s) 433
Bsp119I TTCGAA 1 cut(s) 1373
Bsp1286I GDGCHC 1 cut(s) 591
Bsp143I GATC 8 cut(s) 190, 287, 991, 1148, 1540, 1900, 1969, 2056
Bsp1720I GCTNAGC 1 cut(s) 560
Bsp19I CCATGG 1 cut(s) 270
BspACI CCGC 4 cut(s) 550, 915, 1122, 1769
BspANI GGCC 1 cut(s) 955
BspCNI CTCAG 3 cut(s) 349, 552, 707
BspFNI CGCG 5 cut(s) 161, 1050, 1124, 1905, 2236
BspHI TCATGA 3 cut(s) 393, 1209, 1228
BspLI GGNNCC 2 cut(s) 554, 1971
BspMAI CTGCAG 1 cut(s) 1512
BspMI ACCTGC 1 cut(s) 968
BspPI GGATC 5 cut(s) 295, 986, 1535, 1964, 1977
BspT104I TTCGAA 1 cut(s) 1373
BspTI CTTAAG 1 cut(s) 740
BspTNI GGTCTC 1 cut(s) 443
BsrFI RCCGGY 1 cut(s) 1318
BsrI ACTGG 3 cut(s) 903, 2217, 2257
BssAI RCCGGY 1 cut(s) 1318
BssECI CCNNGG 6 cut(s) 178, 270, 281, 369, 1009, 1800
BssMI GATC 8 cut(s) 190, 287, 991, 1148, 1540, 1900, 1969, 2056
BssSI CACGAG 1 cut(s) 584
BssT1I CCWWGG 3 cut(s) 270, 281, 369
Bst2BI CACGAG 1 cut(s) 584
Bst2UI CCWGG 3 cut(s) 483, 660, 1448
Bst6I CTCTTC 3 cut(s) 79, 724, 1358
BstAFI CTTAAG 1 cut(s) 740
BstBI TTCGAA 1 cut(s) 1373
BstC8I GCNNGC 2 cut(s) 566, 2130
BstDEI CTNAG 5 cut(s) 336, 560, 694, 713, 1218
BstDSI CCRYGG 2 cut(s) 270, 1800
BstF5I GGATG 4 cut(s) 618, 886, 1253, 2016
BstFNI CGCG 5 cut(s) 161, 1050, 1124, 1905, 2236
BstHHI GCGC 2 cut(s) 1907, 2236
BstKTI GATC 8 cut(s) 193, 290, 994, 1151, 1543, 1903, 1972, 2059
BstMAI GTCTC 2 cut(s) 443, 524
BstMBI GATC 8 cut(s) 190, 287, 991, 1148, 1540, 1900, 1969, 2056
BstMCI CGRYCG 1 cut(s) 1903
BstMWI GCNNNNNNNGC 4 cut(s) 556, 565, 1245, 1618
BstNI CCWGG 3 cut(s) 483, 660, 1448
BstNSI RCATGY 2 cut(s) 706, 1789
BstSCI CCNGG 3 cut(s) 481, 658, 1446
BstSFI CTRYAG 6 cut(s) 18, 117, 465, 1095, 1508, 1834
BstUI CGCG 5 cut(s) 161, 1050, 1124, 1905, 2236
BstV1I GCAGC 6 cut(s) 702, 1001, 1087, 1090, 1252, 2063
BstV2I GAAGAC 1 cut(s) 644
BstX2I RGATCY 1 cut(s) 1969
BstXI CCANNNNNNTGG 1 cut(s) 80
BstYI RGATCY 1 cut(s) 1969
Bsu36I CCTNAGG 1 cut(s) 336
BsuRI GGCC 1 cut(s) 955
BtgI CCRYGG 2 cut(s) 270, 1800
BtrI CACGTC 1 cut(s) 645
BtsCI GGATG 4 cut(s) 618, 886, 1253, 2016
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 2 cut(s) 12, 319
BveI ACCTGC 1 cut(s) 968
Cac8I GCNNGC 2 cut(s) 566, 2130
CaiI CAGNNNCTG 1 cut(s) 930
CciI TCATGA 3 cut(s) 393, 1209, 1228
CfoI GCGC 2 cut(s) 1907, 2236
Cfr10I RCCGGY 1 cut(s) 1318
Cfr13I GGNCC 2 cut(s) 1316, 1525
CseI GACGC 1 cut(s) 517
CsiI ACCWGGT 1 cut(s) 1446
Csp6I GTAC 2 cut(s) 927, 1126
CspAI ACCGGT 1 cut(s) 1318
CviQI GTAC 2 cut(s) 927, 1126
DdeI CTNAG 5 cut(s) 336, 560, 694, 713, 1218
DpnI GATC 8 cut(s) 192, 289, 993, 1150, 1542, 1902, 1971, 2058
DpnII GATC 8 cut(s) 190, 287, 991, 1148, 1540, 1900, 1969, 2056
Eam1104I CTCTTC 3 cut(s) 79, 724, 1358
EarI CTCTTC 3 cut(s) 79, 724, 1358
Eco130I CCWWGG 3 cut(s) 270, 281, 369
Eco31I GGTCTC 1 cut(s) 443
Eco47I GGWCC 2 cut(s) 1316, 1525
Eco57I CTGAAG 3 cut(s) 439, 1305, 2184
Eco81I CCTNAGG 1 cut(s) 336
Eco88I CYCGRG 1 cut(s) 433
EcoRI GAATTC 1 cut(s) 1400
EcoRII CCWGG 3 cut(s) 481, 658, 1446
EcoT14I CCWWGG 3 cut(s) 270, 281, 369
EcoT22I ATGCAT 4 cut(s) 253, 1930, 2018, 2248
ErhI CCWWGG 3 cut(s) 270, 281, 369
FalI AAGNNNNNCTT 2 cut(s) 1596, 1628
FaqI GGGAC 8 cut(s) 388, 520, 713, 719, 760, 782, 1359, 1786
FauI CCCGC 1 cut(s) 1762
FauNDI CATATG 1 cut(s) 253
FblI GTMKAC 3 cut(s) 520, 1555, 1833
Fnu4HI GCNGC 6 cut(s) 691, 1015, 1101, 1104, 1266, 2052
FokI GGATG 4 cut(s) 605, 893, 1240, 2003
Fsp4HI GCNGC 6 cut(s) 691, 1015, 1101, 1104, 1266, 2052
FspBI CTAG 8 cut(s) 282, 320, 1109, 1298, 1562, 1665, 1758, 1958
GlaI GCGC 2 cut(s) 1906, 2235
GluI GCNGC 6 cut(s) 691, 1015, 1101, 1104, 1266, 2052
GsuI CTGGAG 1 cut(s) 1776
HaeIII GGCC 1 cut(s) 955
HapII CCGG 7 cut(s) 150, 405, 556, 878, 1033, 1177, 1319
HgaI GACGC 1 cut(s) 517
HhaI GCGC 2 cut(s) 1907, 2236
Hin6I GCGC 2 cut(s) 1905, 2234
HinP1I GCGC 2 cut(s) 1905, 2234
HincII GTYRAC 1 cut(s) 2091
HindII GTYRAC 1 cut(s) 2091
HindIII AAGCTT 1 cut(s) 2101
HinfI GANTC 5 cut(s) 125, 732, 1055, 1796, 2176
HpaII CCGG 7 cut(s) 150, 405, 556, 878, 1033, 1177, 1319
HphI GGTGA 9 cut(s) 164, 584, 775, 815, 1181, 1445, 1490, 1723, 2109
Hpy166II GTNNAC 6 cut(s) 317, 521, 1453, 1556, 1834, 2091
Hpy188III TCNNGA 9 cut(s) 394, 791, 989, 1210, 1229, 1405, 1589, 1632, 1793
Hpy8I GTNNAC 6 cut(s) 317, 521, 1453, 1556, 1834, 2091
Hpy99I CGWCG 1 cut(s) 1143
HpyAV CCTTC 7 cut(s) 156, 428, 463, 991, 1586, 1866, 2139
HpyCH4IV ACGT 2 cut(s) 644, 654
HpyF10VI GCNNNNNNNGC 4 cut(s) 556, 565, 1245, 1618
HpyF3I CTNAG 5 cut(s) 336, 560, 694, 713, 1218
HpySE526I ACGT 2 cut(s) 644, 654
HspAI GCGC 2 cut(s) 1905, 2234
Kzo9I GATC 8 cut(s) 190, 287, 991, 1148, 1540, 1900, 1969, 2056
LmnI GCTCC 1 cut(s) 438
Lsp1109I GCAGC 6 cut(s) 702, 1001, 1087, 1090, 1252, 2063
LweI GCATC 7 cut(s) 15, 1169, 1842, 2003, 2025, 2123, 2255
MabI ACCWGGT 1 cut(s) 1446
MaeI CTAG 8 cut(s) 282, 320, 1109, 1298, 1562, 1665, 1758, 1958
MaeII ACGT 2 cut(s) 644, 654
MaeIII GTNAC 6 cut(s) 260, 598, 917, 1042, 1667, 1781
MalI GATC 8 cut(s) 192, 289, 993, 1150, 1542, 1902, 1971, 2058
MboI GATC 8 cut(s) 190, 287, 991, 1148, 1540, 1900, 1969, 2056
MfeI CAATTG 1 cut(s) 492
MflI RGATCY 1 cut(s) 1969
MhlI GDGCHC 1 cut(s) 591
MluI ACGCGT 1 cut(s) 1048
MlyI GAGTC 3 cut(s) 119, 741, 1805
MmeI TCCRAC 5 cut(s) 833, 1162, 1459, 1997, 2122
Mph1103I ATGCAT 4 cut(s) 253, 1930, 2018, 2248
MroXI GAANNNNTTC 3 cut(s) 833, 1813, 2103
MseI TTAA 5 cut(s) 327, 741, 1964, 1995, 2009
MslI CAYNNNNRTG 2 cut(s) 1653, 2084
MspA1I CMGCKG 1 cut(s) 1166
MspCI CTTAAG 1 cut(s) 740
MspI CCGG 7 cut(s) 150, 405, 556, 878, 1033, 1177, 1319
MspR9I CCNGG 3 cut(s) 483, 660, 1448
MunI CAATTG 1 cut(s) 492
Mva1269I GAATGC 3 cut(s) 971, 1470, 1584
MvaI CCWGG 3 cut(s) 483, 660, 1448
MvnI CGCG 5 cut(s) 161, 1050, 1124, 1905, 2236
MwoI GCNNNNNNNGC 4 cut(s) 556, 565, 1245, 1618
NcoI CCATGG 1 cut(s) 270
NdeI CATATG 1 cut(s) 253
NdeII GATC 8 cut(s) 190, 287, 991, 1148, 1540, 1900, 1969, 2056
NlaIV GGNNCC 2 cut(s) 554, 1971
NmuCI GTSAC 2 cut(s) 598, 1042
NsiI ATGCAT 4 cut(s) 253, 1930, 2018, 2248
NspI RCATGY 2 cut(s) 706, 1789
NspV TTCGAA 1 cut(s) 1373
PagI TCATGA 3 cut(s) 393, 1209, 1228
PciI ACATGT 1 cut(s) 702
PcsI WCGNNNNNNNCGW 1 cut(s) 641
PctI GAATGC 3 cut(s) 971, 1470, 1584
PdmI GAANNNNTTC 3 cut(s) 833, 1813, 2103
PfeI GAWTC 2 cut(s) 1055, 2176
PflFI GACNNNGTC 1 cut(s) 643
PinAI ACCGGT 1 cut(s) 1318
PkrI GCNGC 6 cut(s) 692, 1016, 1102, 1105, 1267, 2053
Ple19I CGATCG 1 cut(s) 1903
PleI GAGTC 3 cut(s) 119, 740, 1804
PpsI GAGTC 3 cut(s) 119, 740, 1804
PscI ACATGT 1 cut(s) 702
PsiI TTATAA 1 cut(s) 1326
Psp6I CCWGG 3 cut(s) 481, 658, 1446
PspGI CCWGG 3 cut(s) 481, 658, 1446
PspN4I GGNNCC 2 cut(s) 554, 1971
PspPI GGNCC 2 cut(s) 1316, 1525
PstI CTGCAG 1 cut(s) 1512
PstNI CAGNNNCTG 1 cut(s) 930
PsuI RGATCY 1 cut(s) 1969
PsyI GACNNNGTC 1 cut(s) 643
PvuI CGATCG 1 cut(s) 1903
PvuII CAGCTG 1 cut(s) 1166
RsaI GTAC 2 cut(s) 928, 1127
RsaNI GTAC 2 cut(s) 927, 1126
RseI CAYNNNNRTG 2 cut(s) 1653, 2084
SaqAI TTAA 5 cut(s) 327, 741, 1964, 1995, 2009
SatI GCNGC 6 cut(s) 691, 1015, 1101, 1104, 1266, 2052
Sau3AI GATC 8 cut(s) 190, 287, 991, 1148, 1540, 1900, 1969, 2056
Sau96I GGNCC 2 cut(s) 1316, 1525
SchI GAGTC 3 cut(s) 119, 741, 1805
ScrFI CCNGG 3 cut(s) 483, 660, 1448
SduI GDGCHC 1 cut(s) 591
SexAI ACCWGGT 1 cut(s) 1446
SfaNI GCATC 7 cut(s) 15, 1169, 1842, 2003, 2025, 2123, 2255
SfcI CTRYAG 6 cut(s) 18, 117, 465, 1095, 1508, 1834
SfuI TTCGAA 1 cut(s) 1373
SinI GGWCC 2 cut(s) 1316, 1525
SmiMI CAYNNNNRTG 2 cut(s) 1653, 2084
SmlI CTYRAG 4 cut(s) 740, 1187, 1602, 1630
SmoI CTYRAG 4 cut(s) 740, 1187, 1602, 1630
SpeI ACTAGT 1 cut(s) 319
SsiI CCGC 4 cut(s) 550, 915, 1122, 1769
SspMI CTAG 8 cut(s) 282, 320, 1109, 1298, 1562, 1665, 1758, 1958
StyD4I CCNGG 3 cut(s) 481, 658, 1446
StyI CCWWGG 3 cut(s) 270, 281, 369
TaiI ACGT 2 cut(s) 647, 657
TaqI TCGA 3 cut(s) 206, 1373, 1590
TaqII GACCGA 1 cut(s) 2015
TfiI GAWTC 2 cut(s) 1055, 2176
Tru1I TTAA 5 cut(s) 327, 741, 1964, 1995, 2009
Tru9I TTAA 5 cut(s) 327, 741, 1964, 1995, 2009
TscAI CASTG 2 cut(s) 12, 319
TseFI GTSAC 2 cut(s) 598, 1042
TseI GCWGC 6 cut(s) 690, 1014, 1100, 1103, 1265, 2051
Tsp45I GTSAC 2 cut(s) 598, 1042
TspGWI ACGGA 3 cut(s) 586, 1789, 1982
TspRI CASTG 2 cut(s) 12, 319
Tth111I GACNNNGTC 1 cut(s) 643
Vha464I CTTAAG 1 cut(s) 740
VpaK11BI GGWCC 2 cut(s) 1316, 1525
XapI RAATTY 3 cut(s) 1400, 1701, 1984
XceI RCATGY 2 cut(s) 706, 1789
XmaJI CCTAGG 1 cut(s) 281
XmiI GTMKAC 3 cut(s) 520, 1555, 1833
XmnI GAANNNNTTC 3 cut(s) 833, 1813, 2103
XspI CTAG 8 cut(s) 282, 320, 1109, 1298, 1562, 1665, 1758, 1958
Zsp2I ATGCAT 4 cut(s) 253, 1930, 2018, 2248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.