FvH4_1g24080

Belongs to the NPH3 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
15930514 .. 15933419
2906 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g24080.t1

Sequence Viewer

Length: 2223 bp
ATGAGGGAATATGTGAGAATAAAAGGGATTAAGGCTGCAAGATATTTGCAGAGGGAGAAGACAGACTCTATTACTCTTCCCCAGGACTTAACTAGTACTGGTGCTAGCTGCTTCCGCTACCAGCTTCATTCAGCTTGCATTGGCTTTAGTCCTCAGACAAACGAGACTAAGATTCTCCAAATACTATGTCACGAAAGCAGTTTCGTGTTCAACATATTCACTCTTGGTGGTACATGGAGGCGTCTAGAGATACAAGACAAAGACTTGGGTGATGTTGCTTTTGATTGTGATGATATTTTTTGGCCAAACTTAGAGTTGGGGTGTGACAGTGTGTTCCTCCATGGGGCCAGACATTGGCTGGAAATGAGTATCGAGGGTTGGCCTGTTGTATTGGTTTTCGACTTTGAACAAGAGCGGTTCAGAGTGATCCCATTTCCTGAAGAATATCATAAAGCTCACAGTGGGGCTTCTCGTCTCCCCAGCTGGAAACTGGACATGATTGAAGTGAATGGATGTGTTGCAGCATATGAGTTCGACTTCTCGAATGGAGGCCTAGGAAATGTTATCACACTATGGATTTTGAAGGATTACCAACATCTGGTGTGGGTTAAAGAGAGTATCATAATTCCCAGAAAATGGAACAAGTTGCAAATGCGCTTTATTCCAAAGTGCTCAATCTACACAGACGAGCTCCTGCTCAAAGGGGGTTTTTGGGGTAAAAAGGTGTACCTTCACAACCTGAACAATAAGCGTTTTACGACGACTCAAGTTTCTATAAAACACGAAATCTTGGGTTGTTATCATGAAAGCATTATCCCCTTAGATGCTTCTCCATGCGACAACAAGTTTTCGTGTGGCTCTCTTGAAGAATATACCGACCTTGTTCTCCGAGTGGGTGACACGGACTTCACATTCACAAGGCAAGCAAAGCTTCTCGGCTGTTTGATATATATGTCCATCTTCTCAGGCAAATCCAACCGTTTAAGAAAGATGGTCTTGGAGGATTCATCAGCACCGCTATATGAATTGCCAGACTTTCCTGGTGGAGCTGAAGTGTTTTTGTATATTCACAAGTTATGTTATGGCATCAGAGGTCCTATGAATGCTTCAACATCTCTTCCTTTCCTCTGTGCGGCTGAATATATGGAGTTGGAGGATGCTTTAATTCAACAAACCATGAAGTTTCTTGAAGAACCAACACTCTATGATTATTGGGAAATATGCGCAGAGCTTTTGAAATCTTGCAAGGATCCTAAAGTTCTAGAGTACGCTAACAAATGTGGGGTTGTAGAAAAATGTACCGGCACCATCAAGTCCCATGCTTCACTCTTTTTTCTCAAGACACAGCTATCTAAAGGAAGTTCTTCACAAATAGGGGCTGAGGAGAAAAAAGCATTCCTTGAACAAGTTGCTCCTTGGTATTTTAGCCAAGTATGTCCAATATCCAACAGTAAGCTACTTCTTGGCCTACACAGATCTGCGTTGTCTCTTCATGCTTCCCAACAATGCGTGGAATGTATCGAGCGTTGTATTGATGCACATCTTCATCGAGTTCCTCCACAATATTTTTATCGTTTTGACATCAACACGGTCCAACGCCTTGCCAACCACTATCTCTACAAACATGAGGGTATTGAAGAGATTGCCACTAATGATAATGCAATTGTGTTGGCTAATCTTGTTGATGCCTACCTCTTGAACAATGCTGCTAATAACTTGTCAGTGGCTCAATTTCAAAAATTAGCAGACTCAGTCCGCCATGCTAGAGCTGTGGAGGACAATTTATATTTTGCTATTGCATTGTATCTACAGTTGCATCCATATTTGGCTGAATCAGAGAGAGAGCAGATTTGTCAATCTTTGACTTGTAAAAATCTGACTCCTGAAGTTCGGATTAATGCGGCAAAAAGCCGTGTCTTGTCTTTAAGAACAATTATTGAGCTCAACTCTCTCAATAATCAAGAGTTAAAACATGATGTTCAACAAAATAAGAGGCGAATTTCTGCTCTTGAGATCACAATCTTGAAGATGAATGACGTCATCGAGAATCTAAAGAAAGAGGAGGAGAAGTTGGGCACTAGGAATTTAAAAGGATCAAACAAGTGGACAACCATGTTTAAGAAACTTGGCTTCAAGAAGAAGCTGGTGTGTACTACAAGTCAGGATGTGGTGCATAACCCAAATCCTATGAGGAAGGACAACATTGGAAATCTGGACTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

741

Amino Acids

84.75

Weight (kDa)

7.05

Isoelectric Point (pI)

45.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 39 - 260 1.5e-15 F-box associated beta propeller domain
NPH3 PF03000 451 - 629 7.3e-25 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000289)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12771 FvH4_1g24070 FvH4_1g24080 FvH4_1g24081 FvH4_3g05670 FvH4_3g33611 FvH4_3g43191 FvH4_4g07091 FvH4_4g07100 FvH4_4g28510 FvH4_4g28520 FvH4_4g30181 FvH4_4g30190 FvH4_4g34271 FvH4_4g34340 FvH4_5g31290 FvH4_6g37661 FvH4_7g33810
malus_domestica MD02G1067600.v1.1 MD03G1110700.v1.1 MD11G1124100.v1.1 MD11G1124200.v1.1 MD11G1124500.v1.1 MD13G1020600.v1.1 MD16G1019000.v1.1
prunus_persica Prupe.1G283900_v2.0.a1 Prupe.1G284000_v2.0.a1 Prupe.1G285200_v2.0.a1 Prupe.1G285300_v2.0.a1 Prupe.1G285500_v2.0.a1 Prupe.1G285600_v2.0.a1 Prupe.1G286300_v2.0.a1 Prupe.1G300600_v2.0.a1 Prupe.1G300900_v2.0.a1 Prupe.1G333100_v2.0.a1 Prupe.6G093100_v2.0.a1
pyrus_communis pycom02g05360 pycom04g05300 pycom11g10460 pycom11g10470 pycom11g10510 pycom13g01740 pycom13g01750 pycom13g04550
rosa_chinensis RchiOBHm_Chr2g0138411 RchiOBHm_Chr2g0138421 RchiOBHm_Chr4g0399251 RchiOBHm_Chr4g0436521
rosa_laevigata RLG00000005896 RLG00000005933 RLG00000006379 RLG00000006511 RLG00000009284 RLG00000019741 RLG00000019742 RLG00000019743 RLG00000020150 RLG00000024158 RLG00000024159 RLG00000030139 RLG00000032057
rosa_multiflora Rmu_co8310765.1_g000001 Rmu_co8476365.1_g000001 Rmu_sc0001426.1_g000004 Rmu_sc0001534.1_g000001 Rmu_sc0001534.1_g000009 Rmu_sc0001534.1_g000010 Rmu_sc0001556.1_g000019 Rmu_sc0001556.1_g000020 Rmu_sc0001779.1_g000020 Rmu_sc0003130.1_g000005 Rmu_sc0005961.1_g000007 Rmu_sc0025546.1_g000001 Rmu_sc0035131.1_g000001 Rmu_sc0035132.1_g000001
rosa_roxburghii Rroxscaffold_1G00062740 Rroxscaffold_2G00106090 Rroxscaffold_2G00106130 Rroxscaffold_2G00106210 Rroxscaffold_4G00324740 Rroxscaffold_4G00324760
rosa_rugosa Rorug04G0015700 Rorug04G0015800 Rorug04G0294500 Rorug04G0345900 Rorug04G0345900 Rorug05G0013800 Rorug05G0336100 Rorug05G0446400
rosa_samantha Rh2AG399300 Rh2BG407000 Rh2BG407300 Rh2BG407400 Rh2CG385800 Rh2DG419200 Rh4AG093400 Rh4AG348800 Rh4AG401200 Rh4AG406800 Rh4AG406900 Rh4CG101600 Rh4CG371900 Rh4CG428200 Rh4CG428300 Rh4DG085500 Rh4DG085700 Rh4DG351400 Rh4DG365000 Rh4DG408300 Rh4DG408400 Rh5AG108000 Rh5BG104700 Rh5BG411400 Rh5BG523400 Rh5DG103300 Rh5DG425800
rosa_wichuraiana Rw0G008940 Rw1G005620 Rw3G022740 Rw4G030510 Rw4G034940 Rw5G009440 Rw5G037570 Rw5G046580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2040
Acc16I TGCGCA 1 cut(s) 1225
AccB1I GGYRCC 1 cut(s) 1304
AccB7I CCANNNNNTGG 3 cut(s) 354, 598, 636
AccBSI CCGCTC 1 cut(s) 415
AciI CCGC 6 cut(s) 115, 415, 1016, 1133, 1756, 1901
AclWI GGATC 4 cut(s) 421, 1244, 1257, 2101
AcoI YGGCCR 1 cut(s) 302
AcsI RAATTY 2 cut(s) 1998, 2083
AcuI CTGAAG 3 cut(s) 459, 1071, 1905
AcyI GRCGYC 2 cut(s) 241, 2037
AfaI GTAC 6 cut(s) 97, 232, 728, 1268, 1300, 2152
AfiI CCNNNNNNNGG 5 cut(s) 343, 354, 598, 636, 1132
AhlI ACTAGT 1 cut(s) 92
AjnI CCWGG 2 cut(s) 81, 1039
Alw21I GWGCWC 3 cut(s) 674, 693, 1944
Alw26I GTCTC 3 cut(s) 158, 479, 1491
AlwI GGATC 4 cut(s) 421, 1244, 1257, 2101
AoxI GGCC 5 cut(s) 302, 345, 380, 550, 1465
ApeKI GCWGC 4 cut(s) 35, 108, 521, 1706
ApoI RAATTY 2 cut(s) 1998, 2083
ArsI GACNNNNNNTTYG 2 cut(s) 172, 204
AseI ATTAAT 1 cut(s) 1896
Asp700I GAANNNNTTC 1 cut(s) 1363
AspA2I CCTAGG 1 cut(s) 553
AspLEI GCGC 2 cut(s) 657, 1226
AspS9I GGNCC 3 cut(s) 345, 1094, 1591
AsuHPI GGTGA 2 cut(s) 281, 908
AsuNHI GCTAGC 1 cut(s) 104
AvaII GGWCC 2 cut(s) 1094, 1591
AvrII CCTAGG 1 cut(s) 553
BaeGI GKGCMC 1 cut(s) 2078
BalI TGGCCA 1 cut(s) 304
BamHI GGATCC 1 cut(s) 1249
BanI GGYRCC 1 cut(s) 1304
BanII GRGCYC 2 cut(s) 693, 1944
BbsI GAAGAC 1 cut(s) 65
Bbv12I GWGCWC 3 cut(s) 674, 693, 1944
BbvCI CCTCAGC 1 cut(s) 1380
BbvI GCAGC 4 cut(s) 22, 95, 533, 1693
BccI CCATC 3 cut(s) 965, 985, 1316
BceAI ACGGC 1 cut(s) 1896
BciT130I CCWGG 2 cut(s) 83, 1041
BcoDI GTCTC 3 cut(s) 158, 479, 1491
BcuI ACTAGT 1 cut(s) 92
BfaI CTAG 7 cut(s) 93, 105, 245, 554, 1262, 1764, 2079
BfmI CTRYAG 1 cut(s) 1808
BglII AGATCT 1 cut(s) 1475
BisI GCNGC 6 cut(s) 36, 109, 522, 1134, 1707, 1902
BlnI CCTAGG 1 cut(s) 553
BlsI GCNGC 6 cut(s) 37, 110, 523, 1135, 1708, 1903
BmcAI AGTACT 1 cut(s) 97
Bme1390I CCNGG 2 cut(s) 83, 1041
Bme18I GGWCC 2 cut(s) 1094, 1591
BmgT120I GGNCC 3 cut(s) 345, 1094, 1591
BmiI GGNNCC 3 cut(s) 346, 1251, 1306
BmrFI CCNGG 2 cut(s) 83, 1041
BmsI GCATC 6 cut(s) 814, 1095, 1147, 1525, 1675, 1825
BmtI GCTAGC 1 cut(s) 108
BpiI GAAGAC 1 cut(s) 65
BplI GAGNNNNNCTC 2 cut(s) 1931, 1963
Bpu10I CCTNAGC 1 cut(s) 1380
BpuEI CTTGAG 3 cut(s) 750, 1322, 2030
BsaBI GATNNNNATC 2 cut(s) 1539, 2018
BsaHI GRCGYC 2 cut(s) 241, 2037
BsaJI CCNNGG 4 cut(s) 81, 340, 553, 1415
BsaXI ACNNNNNCTCC 4 cut(s) 1038, 1068, 2054, 2084
Bsc4I CCNNNNNNNGG 5 cut(s) 343, 354, 598, 636, 1132
Bse118I RCCGGY 1 cut(s) 1301
Bse1I ACTGG 2 cut(s) 103, 495
Bse8I GATNNNNATC 2 cut(s) 1539, 2018
BseBI CCWGG 2 cut(s) 83, 1041
BseDI CCNNGG 4 cut(s) 81, 340, 553, 1415
BseGI GGATG 4 cut(s) 518, 1162, 1816, 2170
BseJI GATNNNNATC 2 cut(s) 1539, 2018
BseLI CCNNNNNNNGG 5 cut(s) 343, 354, 598, 636, 1132
BseMII CTCAG 4 cut(s) 167, 978, 1371, 1764
BseNI ACTGG 2 cut(s) 103, 495
BseRI GAGGAG 3 cut(s) 1397, 2075, 2078
BseSI GKGCMC 1 cut(s) 2078
BseXI GCAGC 4 cut(s) 22, 95, 533, 1693
BseYI CCCAGC 1 cut(s) 479
BshFI GGCC 5 cut(s) 304, 347, 382, 552, 1467
BshNI GGYRCC 1 cut(s) 1304
BsiHKAI GWGCWC 3 cut(s) 674, 693, 1944
BsiSI CCGG 1 cut(s) 1302
BslFI GGGAC 1 cut(s) 1300
BslI CCNNNNNNNGG 5 cut(s) 343, 354, 598, 636, 1132
BsmAI GTCTC 3 cut(s) 158, 479, 1491
BsmBI CGTCTC 1 cut(s) 479
BsmFI GGGAC 1 cut(s) 1300
BsmI GAATGC 2 cut(s) 1108, 1394
BsnI GGCC 5 cut(s) 304, 347, 382, 552, 1467
Bsp1286I GDGCHC 4 cut(s) 674, 693, 1944, 2078
Bsp143I GATC 5 cut(s) 426, 1249, 1475, 2013, 2093
Bsp19I CCATGG 1 cut(s) 340
BspACI CCGC 6 cut(s) 115, 415, 1016, 1133, 1756, 1901
BspANI GGCC 5 cut(s) 304, 347, 382, 552, 1467
BspCNI CTCAG 4 cut(s) 166, 977, 1372, 1763
BspHI TCATGA 1 cut(s) 802
BspLI GGNNCC 3 cut(s) 346, 1251, 1306
BspOI GCTAGC 1 cut(s) 108
BspPI GGATC 4 cut(s) 421, 1244, 1257, 2101
BspT107I GGYRCC 1 cut(s) 1304
BsrBI CCGCTC 1 cut(s) 415
BsrFI RCCGGY 1 cut(s) 1301
BsrI ACTGG 2 cut(s) 103, 495
BssAI RCCGGY 1 cut(s) 1301
BssECI CCNNGG 4 cut(s) 81, 340, 553, 1415
BssMI GATC 5 cut(s) 426, 1249, 1475, 2013, 2093
BssNI GRCGYC 2 cut(s) 241, 2037
BssT1I CCWWGG 3 cut(s) 340, 553, 1415
Bst2UI CCWGG 2 cut(s) 83, 1041
Bst4CI ACNGT 6 cut(s) 329, 461, 980, 1451, 1591, 1812
Bst6I CTCTTC 4 cut(s) 81, 1122, 1494, 1632
BstACI GRCGYC 2 cut(s) 241, 2037
BstC8I GCNNGC 3 cut(s) 106, 136, 924
BstDEI CTNAG 7 cut(s) 153, 168, 310, 820, 964, 1380, 1750
BstDSI CCRYGG 1 cut(s) 340
BstF5I GGATG 4 cut(s) 518, 1162, 1816, 2170
BstHHI GCGC 2 cut(s) 657, 1226
BstKTI GATC 5 cut(s) 429, 1252, 1478, 2016, 2096
BstMAI GTCTC 3 cut(s) 158, 479, 1491
BstMBI GATC 5 cut(s) 426, 1249, 1475, 2013, 2093
BstMWI GCNNNNNNNGC 2 cut(s) 114, 928
BstNI CCWGG 2 cut(s) 83, 1041
BstSCI CCNGG 2 cut(s) 81, 1039
BstSFI CTRYAG 1 cut(s) 1808
BstSLI GKGCMC 1 cut(s) 2078
BstV1I GCAGC 4 cut(s) 22, 95, 533, 1693
BstV2I GAAGAC 1 cut(s) 65
BstX2I RGATCY 2 cut(s) 1249, 1475
BstYI RGATCY 2 cut(s) 1249, 1475
BsuRI GGCC 5 cut(s) 304, 347, 382, 552, 1467
BtgI CCRYGG 1 cut(s) 340
BtsCI GGATG 4 cut(s) 518, 1162, 1816, 2170
BtsIMutI CAGTG 3 cut(s) 334, 466, 1728
Cac8I GCNNGC 3 cut(s) 106, 136, 924
CciI TCATGA 1 cut(s) 802
CfoI GCGC 2 cut(s) 657, 1226
Cfr10I RCCGGY 1 cut(s) 1301
Cfr13I GGNCC 3 cut(s) 345, 1094, 1591
CseI GACGC 1 cut(s) 230
Csp6I GTAC 6 cut(s) 96, 231, 727, 1267, 1299, 2151
CviQI GTAC 6 cut(s) 96, 231, 727, 1267, 1299, 2151
DdeI CTNAG 7 cut(s) 153, 168, 310, 820, 964, 1380, 1750
DpnI GATC 5 cut(s) 428, 1251, 1477, 2015, 2095
DpnII GATC 5 cut(s) 426, 1249, 1475, 2013, 2093
DraI TTTAAA 1 cut(s) 2088
EaeI YGGCCR 1 cut(s) 302
Eam1104I CTCTTC 4 cut(s) 81, 1122, 1494, 1632
EarI CTCTTC 4 cut(s) 81, 1122, 1494, 1632
EciI GGCGGA 1 cut(s) 1745
Ecl136II GAGCTC 2 cut(s) 691, 1942
Eco130I CCWWGG 3 cut(s) 340, 553, 1415
Eco147I AGGCCT 1 cut(s) 552
Eco24I GRGCYC 2 cut(s) 693, 1944
Eco47I GGWCC 2 cut(s) 1094, 1591
Eco53kI GAGCTC 2 cut(s) 691, 1942
Eco57I CTGAAG 3 cut(s) 459, 1071, 1905
EcoICRI GAGCTC 2 cut(s) 691, 1942
EcoO109I RGGNCCY 1 cut(s) 1094
EcoRII CCWGG 2 cut(s) 81, 1039
EcoT14I CCWWGG 3 cut(s) 340, 553, 1415
EcoT38I GRGCYC 2 cut(s) 693, 1944
ErhI CCWWGG 3 cut(s) 340, 553, 1415
Esp3I CGTCTC 1 cut(s) 479
FalI AAGNNNNNCTT 6 cut(s) 915, 947, 980, 1012, 1383, 1415
FaqI GGGAC 1 cut(s) 1300
FauNDI CATATG 1 cut(s) 526
Fnu4HI GCNGC 6 cut(s) 36, 109, 522, 1134, 1707, 1902
FokI GGATG 4 cut(s) 525, 1169, 1803, 2177
FriOI GRGCYC 2 cut(s) 693, 1944
Fsp4HI GCNGC 6 cut(s) 36, 109, 522, 1134, 1707, 1902
FspBI CTAG 7 cut(s) 93, 105, 245, 554, 1262, 1764, 2079
FspI TGCGCA 1 cut(s) 1225
GlaI GCGC 2 cut(s) 656, 1225
GluI GCNGC 6 cut(s) 36, 109, 522, 1134, 1707, 1902
GsaI CCCAGC 1 cut(s) 483
HaeIII GGCC 5 cut(s) 304, 347, 382, 552, 1467
HapII CCGG 1 cut(s) 1302
HgaI GACGC 1 cut(s) 230
HhaI GCGC 2 cut(s) 657, 1226
Hin1I GRCGYC 2 cut(s) 241, 2037
Hin6I GCGC 2 cut(s) 655, 1224
HinP1I GCGC 2 cut(s) 655, 1224
HindIII AAGCTT 1 cut(s) 929
HinfI GANTC 8 cut(s) 65, 172, 763, 1004, 1748, 1832, 1879, 2047
HpaII CCGG 1 cut(s) 1302
HphI GGTGA 2 cut(s) 281, 908
Hpy166II GTNNAC 3 cut(s) 727, 2106, 2151
Hpy188I TCNGA 7 cut(s) 156, 422, 890, 1091, 1837, 1878, 1893
Hpy8I GTNNAC 3 cut(s) 727, 2106, 2151
Hpy99I CGWCG 1 cut(s) 763
HpyAV CCTTC 3 cut(s) 577, 740, 2188
HpyCH4III ACNGT 6 cut(s) 329, 461, 980, 1451, 1591, 1812
HpyCH4IV ACGT 1 cut(s) 2037
HpyF10VI GCNNNNNNNGC 2 cut(s) 114, 928
HpyF3I CTNAG 7 cut(s) 153, 168, 310, 820, 964, 1380, 1750
HpySE526I ACGT 1 cut(s) 2037
Hsp92I GRCGYC 2 cut(s) 241, 2037
HspAI GCGC 2 cut(s) 655, 1224
Kzo9I GATC 5 cut(s) 426, 1249, 1475, 2013, 2093
LmnI GCTCC 3 cut(s) 696, 1046, 1417
Lsp1109I GCAGC 4 cut(s) 22, 95, 533, 1693
LweI GCATC 6 cut(s) 814, 1095, 1147, 1525, 1675, 1825
MaeI CTAG 7 cut(s) 93, 105, 245, 554, 1262, 1764, 2079
MaeII ACGT 1 cut(s) 2037
MaeIII GTNAC 3 cut(s) 188, 323, 896
MalI GATC 5 cut(s) 428, 1251, 1477, 2015, 2095
MbiI CCGCTC 1 cut(s) 415
MboI GATC 5 cut(s) 426, 1249, 1475, 2013, 2093
MfeI CAATTG 1 cut(s) 1662
MflI RGATCY 2 cut(s) 1249, 1475
MhlI GDGCHC 4 cut(s) 674, 693, 1944, 2078
MlsI TGGCCA 1 cut(s) 304
MluNI TGGCCA 1 cut(s) 304
MlyI GAGTC 4 cut(s) 59, 757, 1742, 1873
MmeI TCCRAC 4 cut(s) 999, 1131, 1470, 1618
Mox20I TGGCCA 1 cut(s) 304
MroXI GAANNNNTTC 1 cut(s) 1363
MscI TGGCCA 1 cut(s) 304
Msp20I TGGCCA 1 cut(s) 304
MspA1I CMGCKG 1 cut(s) 483
MspI CCGG 1 cut(s) 1302
MspR9I CCNGG 2 cut(s) 83, 1041
MunI CAATTG 1 cut(s) 1662
Mva1269I GAATGC 2 cut(s) 1108, 1394
MvaI CCWGG 2 cut(s) 83, 1041
MwoI GCNNNNNNNGC 2 cut(s) 114, 928
NcoI CCATGG 1 cut(s) 340
NdeI CATATG 1 cut(s) 526
NdeII GATC 5 cut(s) 426, 1249, 1475, 2013, 2093
NheI GCTAGC 1 cut(s) 104
NlaIV GGNNCC 3 cut(s) 346, 1251, 1306
NmeAIII GCCGAG 1 cut(s) 915
NmuCI GTSAC 3 cut(s) 188, 323, 896
NsbI TGCGCA 1 cut(s) 1225
PagI TCATGA 1 cut(s) 802
PceI AGGCCT 1 cut(s) 552
PctI GAATGC 2 cut(s) 1108, 1394
PdmI GAANNNNTTC 1 cut(s) 1363
PfeI GAWTC 4 cut(s) 172, 1004, 1832, 2047
PflFI GACNNNGTC 1 cut(s) 1751
PflMI CCANNNNNTGG 3 cut(s) 354, 598, 636
PkrI GCNGC 6 cut(s) 37, 110, 523, 1135, 1708, 1903
PleI GAGTC 4 cut(s) 59, 757, 1742, 1873
PpsI GAGTC 4 cut(s) 59, 757, 1742, 1873
PpuMI RGGWCCY 1 cut(s) 1094
PshBI ATTAAT 1 cut(s) 1896
Psp124BI GAGCTC 2 cut(s) 693, 1944
Psp5II RGGWCCY 1 cut(s) 1094
Psp6I CCWGG 2 cut(s) 81, 1039
PspFI CCCAGC 1 cut(s) 479
PspGI CCWGG 2 cut(s) 81, 1039
PspN4I GGNNCC 3 cut(s) 346, 1251, 1306
PspPI GGNCC 3 cut(s) 345, 1094, 1591
PspPPI RGGWCCY 1 cut(s) 1094
PsuI RGATCY 2 cut(s) 1249, 1475
PsyI GACNNNGTC 1 cut(s) 1751
PvuII CAGCTG 1 cut(s) 483
RsaI GTAC 6 cut(s) 97, 232, 728, 1268, 1300, 2152
RsaNI GTAC 6 cut(s) 96, 231, 727, 1267, 1299, 2151
SacI GAGCTC 2 cut(s) 693, 1944
SatI GCNGC 6 cut(s) 36, 109, 522, 1134, 1707, 1902
Sau3AI GATC 5 cut(s) 426, 1249, 1475, 2013, 2093
Sau96I GGNCC 3 cut(s) 345, 1094, 1591
ScaI AGTACT 1 cut(s) 97
SchI GAGTC 4 cut(s) 59, 757, 1742, 1873
ScrFI CCNGG 2 cut(s) 83, 1041
SduI GDGCHC 4 cut(s) 674, 693, 1944, 2078
SfaNI GCATC 6 cut(s) 814, 1095, 1147, 1525, 1675, 1825
SfcI CTRYAG 1 cut(s) 1808
SinI GGWCC 2 cut(s) 1094, 1591
SmlI CTYRAG 3 cut(s) 765, 1337, 2009
SmoI CTYRAG 3 cut(s) 765, 1337, 2009
SpeI ACTAGT 1 cut(s) 92
SseBI AGGCCT 1 cut(s) 552
SsiI CCGC 6 cut(s) 115, 415, 1016, 1133, 1756, 1901
SspI AATATT 1 cut(s) 1565
SspMI CTAG 7 cut(s) 93, 105, 245, 554, 1262, 1764, 2079
SstI GAGCTC 2 cut(s) 693, 1944
StuI AGGCCT 1 cut(s) 552
StyD4I CCNGG 2 cut(s) 81, 1039
StyI CCWWGG 3 cut(s) 340, 553, 1415
TaaI ACNGT 6 cut(s) 329, 461, 980, 1451, 1591, 1812
TaiI ACGT 1 cut(s) 2040
TaqI TCGA 7 cut(s) 372, 399, 534, 542, 1521, 1549, 2043
TatI WGTACW 2 cut(s) 95, 2150
TauI GCSGC 2 cut(s) 1136, 1904
TfiI GAWTC 4 cut(s) 172, 1004, 1832, 2047
TscAI CASTG 3 cut(s) 334, 466, 1728
TseFI GTSAC 3 cut(s) 188, 323, 896
TseI GCWGC 4 cut(s) 35, 108, 521, 1706
Tsp45I GTSAC 3 cut(s) 188, 323, 896
TspDTI ATGAA 9 cut(s) 116, 819, 996, 1038, 1115, 1193, 1481, 1535, 2045
TspGWI ACGGA 1 cut(s) 917
TspRI CASTG 3 cut(s) 334, 466, 1728
Tth111I GACNNNGTC 1 cut(s) 1751
Van91I CCANNNNNTGG 3 cut(s) 354, 598, 636
VpaK11BI GGWCC 2 cut(s) 1094, 1591
VspI ATTAAT 1 cut(s) 1896
XapI RAATTY 2 cut(s) 1998, 2083
XbaI TCTAGA 2 cut(s) 244, 1261
XcmI CCANNNNNNNNNTGG 2 cut(s) 355, 487
XmaJI CCTAGG 1 cut(s) 553
XmnI GAANNNNTTC 1 cut(s) 1363
XspI CTAG 7 cut(s) 93, 105, 245, 554, 1262, 1764, 2079
ZraI GACGTC 1 cut(s) 2038
ZrmI AGTACT 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.