Rw5G046580

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000289
Physical Location & Seq
Reverse (-)
80839966 .. 80847549
7584 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G046580.1

Sequence Viewer

Length: 1218 bp
ATGGAAGACGTTGATGAGGATTCAGTTTCAGAGCTCCCAAGCGAAATCATATGCTCAGAAATACTCCCAAGGCTACCAGCCAAGTCCCTGATGCGCTTCAGATGTGTAAGTAAGCCATGGTCTTCTCTCTTCCGCAACCCTTCCTTTGTCACAGCCCACCGAAACTACCAGCAGTGCCCTAACAAGCAGATGACTAGAGTCCTCGTCGCTGTTTGGGACAAATCCGGAGCCCAACAACACTTGCTGTCAGTCCAAATCAGCCACCAAACAAGTACTAGTAATGATCTATCACAGGCTGTAGCCACCGACCTTCTAAAACTGTCCGCACCAACTCGAAGTGATCTCTACCAAGTACAGCGCACCAATGGCTTGATCTGCCTTCACTTTTGTTATATTAGTGGCGCCATTCGCCTATTTAATCCTAGCACTCGAGATTCCATTACTATTCCCCAGCCTTCCCCTCCTACCGGGCGATGTGTCGACGTTTCACACCACTTAGGGTTCTGTCCTGTTACGAACGAATATAAACTTCTCCAAGTCCAAAGGTTTTGGGACGAAAGGCCTAGACGTACGATAGTGTTCAATATTATCACGTTGGCCATGGGTTCCAGCAGCAGTGTTACTTCTTCATGGAGGCTCTTAGAGGTAGACAATGATGATGCTCTCCCGCTAAAGCTTCTTAATTGCCACTTTGAGAACGGAAGTGTGTGCGTCCAGGGGGCCTTACATTGGGTGGACAGGGTTCGACTATCGCGCTCTGATGAACTGGAGACGACTATTTTAGTAGCTTTCGATGTAAGAGACGAGAGATTCAGATCTACCATTCTACCTAGTGATAACATTACCGACCACTACATTGGTGACATTATTGAACTAAATGGATGTGTAGGTGTGGCATATGTCCGTACGCAAACGATGGAGTTGAGGATTTTGAAGGACTACAAAAATCTAGTCTGGGTTAAGGAGACTATAAGCTTTCCCGCTCATTGGAGAGAGATAAAAAAGGTTTTTTTAGGCAGCGTCCATACCGGAGGCGATGTTATGCTCTTAAAAGTGAGCAACATGGCCAATGGCGTACGAGTTCATCTTTACAATACGAAAACTAAAAATTTCGAAAGTCGCGAAATTGTTTTGCCTGAATCGATAATCTTAGATGATAGTACCGATGCATTGCGAGCATTTATTAGTTATGAGTCATGTATTGTGCCCTTAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

405

Amino Acids

45.94

Weight (kDa)

6.86

Isoelectric Point (pI)

38.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 80 - 377 1.8e-30 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000289)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12771 FvH4_1g24070 FvH4_1g24080 FvH4_1g24081 FvH4_3g05670 FvH4_3g33611 FvH4_3g43191 FvH4_4g07091 FvH4_4g07100 FvH4_4g28510 FvH4_4g28520 FvH4_4g30181 FvH4_4g30190 FvH4_4g34271 FvH4_4g34340 FvH4_5g31290 FvH4_6g37661 FvH4_7g33810
malus_domestica MD02G1067600.v1.1 MD03G1110700.v1.1 MD11G1124100.v1.1 MD11G1124200.v1.1 MD11G1124500.v1.1 MD13G1020600.v1.1 MD16G1019000.v1.1
prunus_persica Prupe.1G283900_v2.0.a1 Prupe.1G284000_v2.0.a1 Prupe.1G285200_v2.0.a1 Prupe.1G285300_v2.0.a1 Prupe.1G285500_v2.0.a1 Prupe.1G285600_v2.0.a1 Prupe.1G286300_v2.0.a1 Prupe.1G300600_v2.0.a1 Prupe.1G300900_v2.0.a1 Prupe.1G333100_v2.0.a1 Prupe.6G093100_v2.0.a1
pyrus_communis pycom02g05360 pycom04g05300 pycom11g10460 pycom11g10470 pycom11g10510 pycom13g01740 pycom13g01750 pycom13g04550
rosa_chinensis RchiOBHm_Chr2g0138411 RchiOBHm_Chr2g0138421 RchiOBHm_Chr4g0399251 RchiOBHm_Chr4g0436521
rosa_laevigata RLG00000005896 RLG00000005933 RLG00000006379 RLG00000006511 RLG00000009284 RLG00000019741 RLG00000019742 RLG00000019743 RLG00000020150 RLG00000024158 RLG00000024159 RLG00000030139 RLG00000032057
rosa_multiflora Rmu_co8310765.1_g000001 Rmu_co8476365.1_g000001 Rmu_sc0001426.1_g000004 Rmu_sc0001534.1_g000001 Rmu_sc0001534.1_g000009 Rmu_sc0001534.1_g000010 Rmu_sc0001556.1_g000019 Rmu_sc0001556.1_g000020 Rmu_sc0001779.1_g000020 Rmu_sc0003130.1_g000005 Rmu_sc0005961.1_g000007 Rmu_sc0025546.1_g000001 Rmu_sc0035131.1_g000001 Rmu_sc0035132.1_g000001
rosa_roxburghii Rroxscaffold_1G00062740 Rroxscaffold_2G00106090 Rroxscaffold_2G00106130 Rroxscaffold_2G00106210 Rroxscaffold_4G00324740 Rroxscaffold_4G00324760
rosa_rugosa Rorug04G0015700 Rorug04G0015800 Rorug04G0294500 Rorug04G0345900 Rorug04G0345900 Rorug05G0013800 Rorug05G0336100 Rorug05G0446400
rosa_samantha Rh2AG399300 Rh2BG407000 Rh2BG407300 Rh2BG407400 Rh2CG385800 Rh2DG419200 Rh4AG093400 Rh4AG348800 Rh4AG401200 Rh4AG406800 Rh4AG406900 Rh4CG101600 Rh4CG371900 Rh4CG428200 Rh4CG428300 Rh4DG085500 Rh4DG085700 Rh4DG351400 Rh4DG365000 Rh4DG408300 Rh4DG408400 Rh5AG108000 Rh5BG104700 Rh5BG411400 Rh5BG523400 Rh5DG103300 Rh5DG425800
rosa_wichuraiana Rw0G008940 Rw1G005620 Rw3G022740 Rw4G030510 Rw4G034940 Rw5G009440 Rw5G037570 Rw5G046580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 401
AccBSI CCGCTC 1 cut(s) 983
AccI GTMKAC 2 cut(s) 480, 648
AccII CGCG 2 cut(s) 754, 1122
AccIII TCCGGA 1 cut(s) 224
AciI CCGC 4 cut(s) 133, 324, 668, 981
AcoI YGGCCR 2 cut(s) 597, 1065
AcsI RAATTY 1 cut(s) 1108
AcuI CTGAAG 1 cut(s) 82
AcyI GRCGYC 1 cut(s) 402
AfaI GTAC 6 cut(s) 274, 354, 571, 907, 1077, 1162
AfiI CCNNNNNNNGG 3 cut(s) 467, 729, 987
AgsI TTSAA 3 cut(s) 583, 872, 934
AhlI ACTAGT 1 cut(s) 275
AjnI CCWGG 1 cut(s) 714
AluBI AGCT 4 cut(s) 34, 676, 788, 975
AluI AGCT 4 cut(s) 34, 676, 788, 975
Alw21I GWGCWC 1 cut(s) 36
Alw26I GTCTC 3 cut(s) 764, 795, 959
Ama87I CYCGRG 1 cut(s) 429
Aor13HI TCCGGA 1 cut(s) 224
AoxI GGCC 4 cut(s) 560, 597, 720, 1065
ApeKI GCWGC 2 cut(s) 612, 1017
ApoI RAATTY 1 cut(s) 1108
ArsI GACNNNNNNTTYG 2 cut(s) 936, 968
AspLEI GCGC 4 cut(s) 96, 360, 404, 756
AspS9I GGNCC 1 cut(s) 720
AsuC2I CCSGG 1 cut(s) 469
AsuHPI GGTGA 1 cut(s) 872
AsuII TTCGAA 1 cut(s) 1113
AvaI CYCGRG 1 cut(s) 429
BaeGI GKGCMC 2 cut(s) 179, 1209
BalI TGGCCA 2 cut(s) 599, 1067
BanI GGYRCC 1 cut(s) 401
BanII GRGCYC 2 cut(s) 36, 232
BbsI GAAGAC 2 cut(s) 12, 114
Bbv12I GWGCWC 1 cut(s) 36
BbvI GCAGC 2 cut(s) 624, 1029
BccI CCATC 1 cut(s) 910
BciT130I CCWGG 1 cut(s) 716
BcnI CCSGG 1 cut(s) 469
BcoDI GTCTC 3 cut(s) 764, 795, 959
BcuI ACTAGT 1 cut(s) 275
BfaI CTAG 6 cut(s) 195, 276, 423, 564, 831, 950
BfmI CTRYAG 1 cut(s) 297
BfoI RGCGCY 1 cut(s) 405
BglII AGATCT 1 cut(s) 815
BisI GCNGC 2 cut(s) 613, 1018
BlsI GCNGC 2 cut(s) 614, 1019
BmcAI AGTACT 1 cut(s) 274
Bme1390I CCNGG 2 cut(s) 469, 716
BmeT110I CYCGRG 1 cut(s) 429
BmgT120I GGNCC 1 cut(s) 720
BmiI GGNNCC 4 cut(s) 229, 403, 607, 721
BmrFI CCNGG 2 cut(s) 469, 716
BmsI GCATC 3 cut(s) 81, 649, 1156
BoxI GACNNNNGTC 1 cut(s) 197
BpiI GAAGAC 2 cut(s) 12, 114
BpmI CTGGAG 1 cut(s) 788
Bpu14I TTCGAA 1 cut(s) 1113
BpuMI CCSGG 1 cut(s) 469
Bsa29I ATCGAT 1 cut(s) 1142
BsaBI GATNNNNATC 1 cut(s) 814
BsaHI GRCGYC 1 cut(s) 402
BsaJI CCNNGG 4 cut(s) 68, 116, 600, 715
BsaWI WCCGGW 2 cut(s) 224, 1028
BsaXI ACNNNNNCTCC 2 cut(s) 1023, 1053
Bsc4I CCNNNNNNNGG 3 cut(s) 467, 729, 987
Bse1I ACTGG 1 cut(s) 771
Bse3DI GCAATG 1 cut(s) 1169
Bse8I GATNNNNATC 1 cut(s) 814
BseAI TCCGGA 1 cut(s) 224
BseBI CCWGG 1 cut(s) 716
BseCI ATCGAT 1 cut(s) 1142
BseDI CCNNGG 4 cut(s) 68, 116, 600, 715
BseGI GGATG 1 cut(s) 887
BseJI GATNNNNATC 1 cut(s) 814
BseLI CCNNNNNNNGG 3 cut(s) 467, 729, 987
BseMI GCAATG 1 cut(s) 1169
BseMII CTCAG 1 cut(s) 69
BseNI ACTGG 1 cut(s) 771
BseSI GKGCMC 2 cut(s) 179, 1209
BseXI GCAGC 2 cut(s) 624, 1029
BseYI CCCAGC 1 cut(s) 450
Bsh1236I CGCG 2 cut(s) 754, 1122
BshFI GGCC 4 cut(s) 562, 599, 722, 1067
BshNI GGYRCC 1 cut(s) 401
BshVI ATCGAT 1 cut(s) 1142
BsiHKAI GWGCWC 1 cut(s) 36
BsiHKCI CYCGRG 1 cut(s) 429
BsiSI CCGG 3 cut(s) 225, 468, 1029
BsiWI CGTACG 3 cut(s) 569, 905, 1075
BslFI GGGAC 3 cut(s) 70, 230, 566
BslI CCNNNNNNNGG 3 cut(s) 467, 729, 987
BsmAI GTCTC 3 cut(s) 764, 795, 959
BsmBI CGTCTC 2 cut(s) 764, 795
BsmFI GGGAC 3 cut(s) 70, 230, 566
BsnI GGCC 4 cut(s) 562, 599, 722, 1067
BsoBI CYCGRG 1 cut(s) 429
Bsp119I TTCGAA 1 cut(s) 1113
Bsp1286I GDGCHC 4 cut(s) 36, 179, 232, 1209
Bsp13I TCCGGA 1 cut(s) 224
Bsp143I GATC 4 cut(s) 283, 340, 372, 815
Bsp19I CCATGG 2 cut(s) 116, 600
Bsp68I TCGCGA 1 cut(s) 1122
BspACI CCGC 4 cut(s) 133, 324, 668, 981
BspANI GGCC 4 cut(s) 562, 599, 722, 1067
BspCNI CTCAG 1 cut(s) 68
BspDI ATCGAT 1 cut(s) 1142
BspEI TCCGGA 1 cut(s) 224
BspFNI CGCG 2 cut(s) 754, 1122
BspLI GGNNCC 4 cut(s) 229, 403, 607, 721
BspT104I TTCGAA 1 cut(s) 1113
BspT107I GGYRCC 1 cut(s) 401
BsrBI CCGCTC 1 cut(s) 983
BsrDI GCAATG 1 cut(s) 1169
BsrI ACTGG 1 cut(s) 771
BssECI CCNNGG 4 cut(s) 68, 116, 600, 715
BssMI GATC 4 cut(s) 283, 340, 372, 815
BssNI GRCGYC 1 cut(s) 402
BssT1I CCWWGG 3 cut(s) 68, 116, 600
Bst2UI CCWGG 1 cut(s) 716
Bst4CI ACNGT 1 cut(s) 321
Bst6I CTCTTC 1 cut(s) 134
BstACI GRCGYC 1 cut(s) 402
BstBI TTCGAA 1 cut(s) 1113
BstC8I GCNNGC 1 cut(s) 1176
BstDEI CTNAG 4 cut(s) 55, 496, 640, 1150
BstDSI CCRYGG 2 cut(s) 116, 600
BstF5I GGATG 1 cut(s) 887
BstFNI CGCG 2 cut(s) 754, 1122
BstH2I RGCGCY 1 cut(s) 405
BstHHI GCGC 4 cut(s) 96, 360, 404, 756
BstKTI GATC 4 cut(s) 286, 343, 375, 818
BstMAI GTCTC 3 cut(s) 764, 795, 959
BstMBI GATC 4 cut(s) 283, 340, 372, 815
BstMWI GCNNNNNNNGC 4 cut(s) 366, 375, 408, 1175
BstNI CCWGG 1 cut(s) 716
BstPAI GACNNNNGTC 1 cut(s) 197
BstSCI CCNGG 2 cut(s) 467, 714
BstSFI CTRYAG 1 cut(s) 297
BstSLI GKGCMC 2 cut(s) 179, 1209
BstUI CGCG 2 cut(s) 754, 1122
BstV1I GCAGC 2 cut(s) 624, 1029
BstV2I GAAGAC 2 cut(s) 12, 114
BstX2I RGATCY 1 cut(s) 815
BstXI CCANNNNNNTGG 1 cut(s) 857
BstYI RGATCY 1 cut(s) 815
Bsu15I ATCGAT 1 cut(s) 1142
BsuRI GGCC 4 cut(s) 562, 599, 722, 1067
BsuTUI ATCGAT 1 cut(s) 1142
BtgI CCRYGG 2 cut(s) 116, 600
BtgZI GCGATG 2 cut(s) 487, 1050
BtsCI GGATG 1 cut(s) 887
BtsI GCAGTG 2 cut(s) 179, 622
BtsIMutI CAGTG 2 cut(s) 179, 622
BtuMI TCGCGA 1 cut(s) 1122
Cac8I GCNNGC 1 cut(s) 1176
CfoI GCGC 4 cut(s) 96, 360, 404, 756
Cfr13I GGNCC 1 cut(s) 720
ClaI ATCGAT 1 cut(s) 1142
CseI GACGC 2 cut(s) 700, 1009
Csp6I GTAC 6 cut(s) 273, 353, 570, 906, 1076, 1161
CviAII CATG 5 cut(s) 117, 601, 630, 1063, 1197
CviQI GTAC 6 cut(s) 273, 353, 570, 906, 1076, 1161
DdeI CTNAG 4 cut(s) 55, 496, 640, 1150
DinI GGCGCC 1 cut(s) 403
DpnI GATC 4 cut(s) 285, 342, 374, 817
DpnII GATC 4 cut(s) 283, 340, 372, 815
EaeI YGGCCR 2 cut(s) 597, 1065
Eam1104I CTCTTC 1 cut(s) 134
EarI CTCTTC 1 cut(s) 134
Ecl136II GAGCTC 1 cut(s) 34
Eco130I CCWWGG 3 cut(s) 68, 116, 600
Eco147I AGGCCT 1 cut(s) 562
Eco24I GRGCYC 2 cut(s) 36, 232
Eco53kI GAGCTC 1 cut(s) 34
Eco57I CTGAAG 1 cut(s) 82
Eco88I CYCGRG 1 cut(s) 429
EcoICRI GAGCTC 1 cut(s) 34
EcoO109I RGGNCCY 1 cut(s) 720
EcoRII CCWGG 1 cut(s) 714
EcoT14I CCWWGG 3 cut(s) 68, 116, 600
EcoT22I ATGCAT 1 cut(s) 1171
EcoT38I GRGCYC 2 cut(s) 36, 232
EgeI GGCGCC 1 cut(s) 403
EheI GGCGCC 1 cut(s) 403
ErhI CCWWGG 3 cut(s) 68, 116, 600
Esp3I CGTCTC 2 cut(s) 764, 795
FaeI CATG 5 cut(s) 120, 604, 633, 1066, 1200
FaqI GGGAC 3 cut(s) 70, 230, 566
FatI CATG 5 cut(s) 116, 600, 629, 1062, 1196
FauI CCCGC 2 cut(s) 675, 988
FauNDI CATATG 2 cut(s) 50, 898
FblI GTMKAC 2 cut(s) 480, 648
Fnu4HI GCNGC 2 cut(s) 613, 1018
FokI GGATG 1 cut(s) 894
FriOI GRGCYC 2 cut(s) 36, 232
Fsp4HI GCNGC 2 cut(s) 613, 1018
FspBI CTAG 6 cut(s) 195, 276, 423, 564, 831, 950
GlaI GCGC 4 cut(s) 95, 359, 403, 755
GluI GCNGC 2 cut(s) 613, 1018
GsaI CCCAGC 1 cut(s) 454
GsuI CTGGAG 1 cut(s) 788
HaeII RGCGCY 1 cut(s) 405
HaeIII GGCC 4 cut(s) 562, 599, 722, 1067
HapII CCGG 3 cut(s) 225, 468, 1029
HgaI GACGC 2 cut(s) 700, 1009
HhaI GCGC 4 cut(s) 96, 360, 404, 756
Hin1I GRCGYC 1 cut(s) 402
Hin1II CATG 5 cut(s) 120, 604, 633, 1066, 1200
Hin6I GCGC 4 cut(s) 94, 358, 402, 754
HinP1I GCGC 4 cut(s) 94, 358, 402, 754
HincII GTYRAC 1 cut(s) 481
HindII GTYRAC 1 cut(s) 481
HindIII AAGCTT 2 cut(s) 674, 973
HinfI GANTC 6 cut(s) 20, 198, 434, 810, 1139, 1193
HpaII CCGG 3 cut(s) 225, 468, 1029
HphI GGTGA 1 cut(s) 872
Hpy166II GTNNAC 3 cut(s) 481, 649, 736
Hpy188I TCNGA 5 cut(s) 31, 58, 101, 760, 815
Hpy188III TCNNGA 3 cut(s) 225, 431, 1121
Hpy8I GTNNAC 3 cut(s) 481, 649, 736
Hpy99I CGWCG 2 cut(s) 209, 485
HpyAV CCTTC 5 cut(s) 150, 320, 389, 465, 928
HpyCH4III ACNGT 1 cut(s) 321
HpyCH4IV ACGT 4 cut(s) 9, 483, 568, 593
HpyCH4V TGCA 1 cut(s) 1169
HpyF10VI GCNNNNNNNGC 4 cut(s) 366, 375, 408, 1175
HpyF3I CTNAG 4 cut(s) 55, 496, 640, 1150
HpySE526I ACGT 4 cut(s) 9, 483, 568, 593
Hsp92I GRCGYC 1 cut(s) 402
Hsp92II CATG 5 cut(s) 120, 604, 633, 1066, 1200
HspAI GCGC 4 cut(s) 94, 358, 402, 754
KasI GGCGCC 1 cut(s) 401
Kpn2I TCCGGA 1 cut(s) 224
Kzo9I GATC 4 cut(s) 283, 340, 372, 815
LmnI GCTCC 2 cut(s) 39, 227
Lsp1109I GCAGC 2 cut(s) 624, 1029
LweI GCATC 3 cut(s) 81, 649, 1156
MaeI CTAG 6 cut(s) 195, 276, 423, 564, 831, 950
MaeII ACGT 4 cut(s) 9, 483, 568, 593
MaeIII GTNAC 4 cut(s) 148, 511, 619, 860
MalI GATC 4 cut(s) 285, 342, 374, 817
MbiI CCGCTC 1 cut(s) 983
MboI GATC 4 cut(s) 283, 340, 372, 815
MboII GAAGA 4 cut(s) 17, 114, 121, 618
MflI RGATCY 1 cut(s) 815
MhlI GDGCHC 4 cut(s) 36, 179, 232, 1209
MlsI TGGCCA 2 cut(s) 599, 1067
MluCI AATT 3 cut(s) 682, 1108, 1125
MluNI TGGCCA 2 cut(s) 599, 1067
Mly113I GGCGCC 1 cut(s) 402
MlyI GAGTC 2 cut(s) 207, 1202
MnlI CCTC 7 cut(s) 10, 212, 471, 627, 637, 918, 1025
Mox20I TGGCCA 2 cut(s) 599, 1067
Mph1103I ATGCAT 1 cut(s) 1171
MroI TCCGGA 1 cut(s) 224
MscI TGGCCA 2 cut(s) 599, 1067
MseI TTAA 5 cut(s) 417, 681, 960, 1049, 1211
Msp20I TGGCCA 2 cut(s) 599, 1067
MspI CCGG 3 cut(s) 225, 468, 1029
MspR9I CCNGG 2 cut(s) 469, 716
MvaI CCWGG 1 cut(s) 716
MvnI CGCG 2 cut(s) 754, 1122
MwoI GCNNNNNNNGC 4 cut(s) 366, 375, 408, 1175
NarI GGCGCC 1 cut(s) 402
NciI CCSGG 1 cut(s) 469
NcoI CCATGG 2 cut(s) 116, 600
NdeI CATATG 2 cut(s) 50, 898
NdeII GATC 4 cut(s) 283, 340, 372, 815
NlaIII CATG 5 cut(s) 120, 604, 633, 1066, 1200
NlaIV GGNNCC 4 cut(s) 229, 403, 607, 721
NmuCI GTSAC 2 cut(s) 148, 860
NruI TCGCGA 1 cut(s) 1122
NsiI ATGCAT 1 cut(s) 1171
NspV TTCGAA 1 cut(s) 1113
PaeR7I CTCGAG 1 cut(s) 429
PceI AGGCCT 1 cut(s) 562
PcsI WCGNNNNNNNCGW 1 cut(s) 1119
PfeI GAWTC 4 cut(s) 20, 434, 810, 1139
Pfl23II CGTACG 3 cut(s) 569, 905, 1075
PkrI GCNGC 2 cut(s) 614, 1019
PleI GAGTC 2 cut(s) 206, 1201
PluTI GGCGCC 1 cut(s) 405
PpsI GAGTC 2 cut(s) 206, 1201
PshAI GACNNNNGTC 1 cut(s) 197
Psp124BI GAGCTC 1 cut(s) 36
Psp6I CCWGG 1 cut(s) 714
PspFI CCCAGC 1 cut(s) 450
PspGI CCWGG 1 cut(s) 714
PspLI CGTACG 3 cut(s) 569, 905, 1075
PspN4I GGNNCC 4 cut(s) 229, 403, 607, 721
PspPI GGNCC 1 cut(s) 720
PsuI RGATCY 1 cut(s) 815
RruI TCGCGA 1 cut(s) 1122
RsaI GTAC 6 cut(s) 274, 354, 571, 907, 1077, 1162
RsaNI GTAC 6 cut(s) 273, 353, 570, 906, 1076, 1161
SacI GAGCTC 1 cut(s) 36
SalI GTCGAC 1 cut(s) 479
SaqAI TTAA 5 cut(s) 417, 681, 960, 1049, 1211
SatI GCNGC 2 cut(s) 613, 1018
Sau3AI GATC 4 cut(s) 283, 340, 372, 815
Sau96I GGNCC 1 cut(s) 720
ScaI AGTACT 1 cut(s) 274
SchI GAGTC 2 cut(s) 207, 1202
ScrFI CCNGG 2 cut(s) 469, 716
SduI GDGCHC 4 cut(s) 36, 179, 232, 1209
SfaNI GCATC 3 cut(s) 81, 649, 1156
SfcI CTRYAG 1 cut(s) 297
SfoI GGCGCC 1 cut(s) 403
Sfr274I CTCGAG 1 cut(s) 429
SfuI TTCGAA 1 cut(s) 1113
SlaI CTCGAG 1 cut(s) 429
SmlI CTYRAG 1 cut(s) 429
SmoI CTYRAG 1 cut(s) 429
SpeI ACTAGT 1 cut(s) 275
Sse9I AATT 3 cut(s) 682, 1108, 1125
SseBI AGGCCT 1 cut(s) 562
SsiI CCGC 4 cut(s) 133, 324, 668, 981
SspDI GGCGCC 1 cut(s) 401
SspI AATATT 1 cut(s) 586
SspMI CTAG 6 cut(s) 195, 276, 423, 564, 831, 950
SstI GAGCTC 1 cut(s) 36
StuI AGGCCT 1 cut(s) 562
StyD4I CCNGG 2 cut(s) 467, 714
StyI CCWWGG 3 cut(s) 68, 116, 600
TaaI ACNGT 1 cut(s) 321
TaiI ACGT 4 cut(s) 12, 486, 571, 596
TaqI TCGA 7 cut(s) 334, 430, 480, 745, 792, 1113, 1142
TasI AATT 3 cut(s) 682, 1108, 1125
TatI WGTACW 2 cut(s) 272, 352
TfiI GAWTC 4 cut(s) 20, 434, 810, 1139
Tru1I TTAA 5 cut(s) 417, 681, 960, 1049, 1211
Tru9I TTAA 5 cut(s) 417, 681, 960, 1049, 1211
TscAI CASTG 2 cut(s) 179, 622
TseFI GTSAC 2 cut(s) 148, 860
TseI GCWGC 2 cut(s) 612, 1017
Tsp45I GTSAC 2 cut(s) 148, 860
TspDTI ATGAA 3 cut(s) 618, 777, 1073
TspGWI ACGGA 2 cut(s) 714, 893
TspRI CASTG 2 cut(s) 179, 622
XapI RAATTY 1 cut(s) 1108
XhoI CTCGAG 1 cut(s) 429
XmiI GTMKAC 2 cut(s) 480, 648
XspI CTAG 6 cut(s) 195, 276, 423, 564, 831, 950
ZrmI AGTACT 1 cut(s) 274
Zsp2I ATGCAT 1 cut(s) 1171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.