Prupe.1G333100_v2.0.a1

F-box associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000289
Physical Location & Seq
Forward (+)
31536945 .. 31539398
2454 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G333100.1

Sequence Viewer

Length: 1431 bp
ATGTCGAAGCAGCCATTGTTGTTGTTAATAGCAGGGAAACCTAGGCTGTCTGTAGCAAGCAGAGGTTTTTCTCCACTCTGTCTCTGCTGCACTGCTTTTCTCCACCCTCTGCCGCTGCACGCCGCCGTCATCACCACTCATAGCCGCACACTGCCATCCAAAGCTTCAAATCACTCAGGTAGTAGTAGAAACATGGAAGTAGCTGAAGTTGAAGGTGATCATGTTCCATCAGTAATTCCAGAGCTCCCAAGTGAAATCATATGGTTTCTTATACTGCCACGGCTACCAGCTAAGTCTCTGATGCGGTTCAAGTGCGTTTGCAAGTCATGGTCCTCTCTCATCTCCGGTAACCCTACATTTCTTGGTGTCCACCGAAACTTGCGCTGCAACAACAGCAGGTACACTCACCTCCTCCTCAATGTCTTTGACCGCGACACAGGCCACGACCACTTGCTCTCCGTCCAAATCAACCAAGATGGAGATGGAGATGGAGATGGTAGTACCTCACCTGCCACCCACCTTCTAACACTGCCCCCTGACTATCATCTCTACGATTATCAGTGTACTAATGGCCTGTTTTGTATTTTTTACTTTGCTAAACCGGTAGCCACTAAAACCCACCATGAACATGACCCCGAGGACCACGTTCATATATTTAATCCCTCCACTGGAGAGTCGATCATTCTCCCCCATACTTCACTGTCCAAATACACACTCCAGATTAAAGGCCACTTTGGGTTCAGTCCTTTTACAAACGAGTATAAGCTTCTCCAAGTCCATTTATGCCATGATTGGACTTCAAATCTCTTTAGTTTAAAGCTCGAGATTTTGACTTTGGGTTCTGATTCATGGAGGTGCATTGAGGTAGACCTCGATCACCTCCCTTTTAATCCCCTTTCTTCCCACTTGTATGGCGAAAGTGTGTGCCTTCATGGAGCCCTACATTGGATATATCAAGATGGTGAGGATAGGAGTAGGATAGTGGTATTTGACCTTGGAGAGGAGAGATTCAAGGTCATCACAACTCCTGAAGATGATGGTAGTGATCCCTGTTGGACAATTGCTGAAGTGGGTGGACGTCTAGCTCTAATGGATGACAAGGATGCGATGCCACAGAAATTAATGTTGGAGTTATGGATTTTGAAGGACTACCAAAATCAAGTGTGGGCTAAAGAGACTATCAATTTTCCCTCTCATTGGCGGGAGTCGACGTACCATCATTTGAATTCTTTACGTACAATTCACACAGGTGAGCTCTTCATTCAATCTTCACCGGAAGTACAGGCATCTCATCATTTCTATGATATGAAGAGTAATAGTTTTTATAAAAGTTCAATTGTTTTGCCTGATTTGATATGGCGGAATGATGGTGATGCTCGGTTGGGCTTAATTACTAGTTATCGTGAAACCCTTGCCCCCTTAAGATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

477

Amino Acids

53.99

Weight (kDa)

6.13

Isoelectric Point (pI)

41.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000289)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12771 FvH4_1g24070 FvH4_1g24080 FvH4_1g24081 FvH4_3g05670 FvH4_3g33611 FvH4_3g43191 FvH4_4g07091 FvH4_4g07100 FvH4_4g28510 FvH4_4g28520 FvH4_4g30181 FvH4_4g30190 FvH4_4g34271 FvH4_4g34340 FvH4_5g31290 FvH4_6g37661 FvH4_7g33810
malus_domestica MD02G1067600.v1.1 MD03G1110700.v1.1 MD11G1124100.v1.1 MD11G1124200.v1.1 MD11G1124500.v1.1 MD13G1020600.v1.1 MD16G1019000.v1.1
prunus_persica Prupe.1G283900_v2.0.a1 Prupe.1G284000_v2.0.a1 Prupe.1G285200_v2.0.a1 Prupe.1G285300_v2.0.a1 Prupe.1G285500_v2.0.a1 Prupe.1G285600_v2.0.a1 Prupe.1G286300_v2.0.a1 Prupe.1G300600_v2.0.a1 Prupe.1G300900_v2.0.a1 Prupe.1G333100_v2.0.a1 Prupe.6G093100_v2.0.a1
pyrus_communis pycom02g05360 pycom04g05300 pycom11g10460 pycom11g10470 pycom11g10510 pycom13g01740 pycom13g01750 pycom13g04550
rosa_chinensis RchiOBHm_Chr2g0138411 RchiOBHm_Chr2g0138421 RchiOBHm_Chr4g0399251 RchiOBHm_Chr4g0436521
rosa_laevigata RLG00000005896 RLG00000005933 RLG00000006379 RLG00000006511 RLG00000009284 RLG00000019741 RLG00000019742 RLG00000019743 RLG00000020150 RLG00000024158 RLG00000024159 RLG00000030139 RLG00000032057
rosa_multiflora Rmu_co8310765.1_g000001 Rmu_co8476365.1_g000001 Rmu_sc0001426.1_g000004 Rmu_sc0001534.1_g000001 Rmu_sc0001534.1_g000009 Rmu_sc0001534.1_g000010 Rmu_sc0001556.1_g000019 Rmu_sc0001556.1_g000020 Rmu_sc0001779.1_g000020 Rmu_sc0003130.1_g000005 Rmu_sc0005961.1_g000007 Rmu_sc0025546.1_g000001 Rmu_sc0035131.1_g000001 Rmu_sc0035132.1_g000001
rosa_roxburghii Rroxscaffold_1G00062740 Rroxscaffold_2G00106090 Rroxscaffold_2G00106130 Rroxscaffold_2G00106210 Rroxscaffold_4G00324740 Rroxscaffold_4G00324760
rosa_rugosa Rorug04G0015700 Rorug04G0015800 Rorug04G0294500 Rorug04G0345900 Rorug04G0345900 Rorug05G0013800 Rorug05G0336100 Rorug05G0446400
rosa_samantha Rh2AG399300 Rh2BG407000 Rh2BG407300 Rh2BG407400 Rh2CG385800 Rh2DG419200 Rh4AG093400 Rh4AG348800 Rh4AG401200 Rh4AG406800 Rh4AG406900 Rh4CG101600 Rh4CG371900 Rh4CG428200 Rh4CG428300 Rh4DG085500 Rh4DG085700 Rh4DG351400 Rh4DG365000 Rh4DG408300 Rh4DG408400 Rh5AG108000 Rh5BG104700 Rh5BG411400 Rh5BG523400 Rh5DG103300 Rh5DG425800
rosa_wichuraiana Rw0G008940 Rw1G005620 Rw3G022740 Rw4G030510 Rw4G034940 Rw5G009440 Rw5G037570 Rw5G046580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1326, 1429
AarI CACCTGC 1 cut(s) 517
AatII GACGTC 1 cut(s) 1081
Acc36I ACCTGC 2 cut(s) 387, 517
AccI GTMKAC 2 cut(s) 867, 1208
AccII CGCG 1 cut(s) 432
AciI CCGC 7 cut(s) 113, 123, 145, 304, 430, 1201, 1360
AclWI GGATC 1 cut(s) 1040
AcsI RAATTY 1 cut(s) 1225
AcuI CTGAAG 3 cut(s) 225, 1050, 1086
AcyI GRCGYC 1 cut(s) 1078
AfaI GTAC 6 cut(s) 401, 502, 565, 1214, 1237, 1281
AfiI CCNNNNNNNGG 4 cut(s) 668, 945, 1000, 1197
AflII CTTAAG 1 cut(s) 1420
AgeI ACCGGT 1 cut(s) 601
AgsI TTSAA 9 cut(s) 168, 212, 310, 801, 1012, 1144, 1225, 1265, 1335
AhlI ACTAGT 1 cut(s) 1394
AjuI GAANNNNNNNTTGG 2 cut(s) 1109, 1141
AleI CACNNNNGTG 1 cut(s) 1248
AluBI AGCT 8 cut(s) 164, 203, 244, 290, 766, 820, 1085, 1255
AluI AGCT 8 cut(s) 164, 203, 244, 290, 766, 820, 1085, 1255
Alw21I GWGCWC 2 cut(s) 246, 1257
Alw26I GTCTC 3 cut(s) 86, 300, 1169
AlwI GGATC 1 cut(s) 1040
Ama87I CYCGRG 2 cut(s) 635, 821
AoxI GGCC 3 cut(s) 439, 571, 727
ApeKI GCWGC 4 cut(s) 10, 87, 115, 384
ApoI RAATTY 1 cut(s) 1225
AseI ATTAAT 1 cut(s) 1121
AsiGI ACCGGT 1 cut(s) 601
AspA2I CCTAGG 1 cut(s) 41
AspLEI GCGC 1 cut(s) 384
AspS9I GGNCC 2 cut(s) 330, 640
AsuHPI GGTGA 9 cut(s) 124, 227, 398, 498, 869, 974, 1262, 1263, 1382
AvaI CYCGRG 2 cut(s) 635, 821
AvaII GGWCC 2 cut(s) 330, 640
AvrII CCTAGG 1 cut(s) 41
BanII GRGCYC 3 cut(s) 246, 940, 1257
Bbv12I GWGCWC 2 cut(s) 246, 1257
BbvI GCAGC 4 cut(s) 22, 74, 102, 371
BceAI ACGGC 2 cut(s) 110, 296
BclI TGATCA 1 cut(s) 217
BcoDI GTCTC 3 cut(s) 86, 300, 1169
BcuI ACTAGT 1 cut(s) 1394
BfaI CTAG 3 cut(s) 42, 1082, 1395
BfmI CTRYAG 1 cut(s) 51
BfrI CTTAAG 1 cut(s) 1420
BfuAI ACCTGC 2 cut(s) 387, 517
BisI GCNGC 7 cut(s) 11, 88, 113, 116, 123, 145, 385
BlnI CCTAGG 1 cut(s) 41
BlsI GCNGC 7 cut(s) 12, 89, 114, 117, 124, 146, 386
Bme18I GGWCC 2 cut(s) 330, 640
BmeT110I CYCGRG 2 cut(s) 635, 821
BmgT120I GGNCC 2 cut(s) 330, 640
BmiI GGNNCC 1 cut(s) 937
BmsI GCATC 5 cut(s) 291, 1093, 1098, 1295, 1363
BpmI CTGGAG 2 cut(s) 690, 701
BsaAI YACGTR 1 cut(s) 1235
BsaHI GRCGYC 1 cut(s) 1078
BsaJI CCNNGG 4 cut(s) 41, 278, 636, 994
BsaWI WCCGGW 3 cut(s) 344, 601, 1273
BsaXI ACNNNNNCTCC 4 cut(s) 440, 470, 1196, 1226
Bsc4I CCNNNNNNNGG 4 cut(s) 668, 945, 1000, 1197
Bse118I RCCGGY 1 cut(s) 601
Bse1I ACTGG 1 cut(s) 673
BseDI CCNNGG 4 cut(s) 41, 278, 636, 994
BseGI GGATG 3 cut(s) 155, 1099, 1108
BseLI CCNNNNNNNGG 4 cut(s) 668, 945, 1000, 1197
BseMII CTCAG 1 cut(s) 189
BseNI ACTGG 1 cut(s) 673
BseRI GAGGAG 3 cut(s) 401, 404, 1016
BseXI GCAGC 4 cut(s) 22, 74, 102, 371
BsgI GTGCAG 2 cut(s) 73, 101
Bsh1236I CGCG 1 cut(s) 432
BshFI GGCC 3 cut(s) 441, 573, 729
BshTI ACCGGT 1 cut(s) 601
BsiHKAI GWGCWC 2 cut(s) 246, 1257
BsiHKCI CYCGRG 2 cut(s) 635, 821
BsiSI CCGG 3 cut(s) 345, 602, 1274
BslI CCNNNNNNNGG 4 cut(s) 668, 945, 1000, 1197
BsmAI GTCTC 3 cut(s) 86, 300, 1169
BsnI GGCC 3 cut(s) 441, 573, 729
BsoBI CYCGRG 2 cut(s) 635, 821
Bsp1286I GDGCHC 3 cut(s) 246, 940, 1257
Bsp143I GATC 4 cut(s) 217, 678, 874, 1045
BspACI CCGC 7 cut(s) 113, 123, 145, 304, 430, 1201, 1360
BspANI GGCC 3 cut(s) 441, 573, 729
BspCNI CTCAG 1 cut(s) 188
BspFNI CGCG 1 cut(s) 432
BspLI GGNNCC 1 cut(s) 937
BspMI ACCTGC 2 cut(s) 387, 517
BspPI GGATC 1 cut(s) 1040
BspQI GCTCTTC 1 cut(s) 1262
BspTI CTTAAG 1 cut(s) 1420
BsrFI RCCGGY 1 cut(s) 601
BsrI ACTGG 1 cut(s) 673
BssAI RCCGGY 1 cut(s) 601
BssECI CCNNGG 4 cut(s) 41, 278, 636, 994
BssMI GATC 4 cut(s) 217, 678, 874, 1045
BssNI GRCGYC 1 cut(s) 1078
BssT1I CCWWGG 2 cut(s) 41, 994
Bst4CI ACNGT 1 cut(s) 702
Bst6I CTCTTC 2 cut(s) 1262, 1304
BstACI GRCGYC 1 cut(s) 1078
BstAFI CTTAAG 1 cut(s) 1420
BstBAI YACGTR 1 cut(s) 1235
BstC8I GCNNGC 2 cut(s) 58, 120
BstDEI CTNAG 2 cut(s) 175, 291
BstDSI CCRYGG 1 cut(s) 278
BstEII GGTNACC 1 cut(s) 347
BstENI CCTNNNNNAGG 1 cut(s) 998
BstF5I GGATG 3 cut(s) 155, 1099, 1108
BstFNI CGCG 1 cut(s) 432
BstHHI GCGC 1 cut(s) 384
BstKTI GATC 4 cut(s) 220, 681, 877, 1048
BstMAI GTCTC 3 cut(s) 86, 300, 1169
BstMBI GATC 4 cut(s) 217, 678, 874, 1045
BstMWI GCNNNNNNNGC 2 cut(s) 393, 438
BstPI GGTNACC 1 cut(s) 347
BstSFI CTRYAG 1 cut(s) 51
BstSNI TACGTA 1 cut(s) 1235
BstUI CGCG 1 cut(s) 432
BstV1I GCAGC 4 cut(s) 22, 74, 102, 371
BstXI CCANNNNNNTGG 1 cut(s) 911
BsuRI GGCC 3 cut(s) 441, 573, 729
BtgI CCRYGG 1 cut(s) 278
BtgZI GCGATG 1 cut(s) 1121
BtsCI GGATG 3 cut(s) 155, 1099, 1108
BtsI GCAGTG 3 cut(s) 90, 149, 527
BtsIMutI CAGTG 6 cut(s) 90, 149, 527, 566, 666, 698
BveI ACCTGC 2 cut(s) 387, 517
Cac8I GCNNGC 2 cut(s) 58, 120
CfoI GCGC 1 cut(s) 384
Cfr10I RCCGGY 1 cut(s) 601
Cfr13I GGNCC 2 cut(s) 330, 640
Csp6I GTAC 6 cut(s) 400, 501, 564, 1213, 1236, 1280
CspAI ACCGGT 1 cut(s) 601
CviAII CATG 8 cut(s) 193, 221, 327, 623, 629, 788, 849, 932
CviQI GTAC 6 cut(s) 400, 501, 564, 1213, 1236, 1280
DdeI CTNAG 2 cut(s) 175, 291
DpnI GATC 4 cut(s) 219, 680, 876, 1047
DpnII GATC 4 cut(s) 217, 678, 874, 1045
DraI TTTAAA 1 cut(s) 816
Eam1104I CTCTTC 2 cut(s) 1262, 1304
EarI CTCTTC 2 cut(s) 1262, 1304
EciI GGCGGA 1 cut(s) 1375
Ecl136II GAGCTC 2 cut(s) 244, 1255
Eco105I TACGTA 1 cut(s) 1235
Eco130I CCWWGG 2 cut(s) 41, 994
Eco24I GRGCYC 3 cut(s) 246, 940, 1257
Eco47I GGWCC 2 cut(s) 330, 640
Eco53kI GAGCTC 2 cut(s) 244, 1255
Eco57I CTGAAG 3 cut(s) 225, 1050, 1086
Eco88I CYCGRG 2 cut(s) 635, 821
Eco91I GGTNACC 1 cut(s) 347
EcoICRI GAGCTC 2 cut(s) 244, 1255
EcoNI CCTNNNNNAGG 1 cut(s) 998
EcoO65I GGTNACC 1 cut(s) 347
EcoRI GAATTC 1 cut(s) 1225
EcoT14I CCWWGG 2 cut(s) 41, 994
EcoT38I GRGCYC 3 cut(s) 246, 940, 1257
ErhI CCWWGG 2 cut(s) 41, 994
FaeI CATG 8 cut(s) 196, 224, 330, 626, 632, 791, 852, 935
FatI CATG 8 cut(s) 192, 220, 326, 622, 628, 787, 848, 931
FauI CCCGC 1 cut(s) 1194
FauNDI CATATG 1 cut(s) 260
FbaI TGATCA 1 cut(s) 217
FblI GTMKAC 2 cut(s) 867, 1208
Fnu4HI GCNGC 7 cut(s) 11, 88, 113, 116, 123, 145, 385
FokI GGATG 3 cut(s) 142, 1106, 1115
FriOI GRGCYC 3 cut(s) 246, 940, 1257
Fsp4HI GCNGC 7 cut(s) 11, 88, 113, 116, 123, 145, 385
FspBI CTAG 3 cut(s) 42, 1082, 1395
GlaI GCGC 1 cut(s) 383
GluI GCNGC 7 cut(s) 11, 88, 113, 116, 123, 145, 385
GsuI CTGGAG 2 cut(s) 690, 701
HaeIII GGCC 3 cut(s) 441, 573, 729
HapII CCGG 3 cut(s) 345, 602, 1274
HhaI GCGC 1 cut(s) 384
Hin1I GRCGYC 1 cut(s) 1078
Hin1II CATG 8 cut(s) 196, 224, 330, 626, 632, 791, 852, 935
Hin6I GCGC 1 cut(s) 382
HinP1I GCGC 1 cut(s) 382
HincII GTYRAC 1 cut(s) 1209
HindII GTYRAC 1 cut(s) 1209
HindIII AAGCTT 2 cut(s) 162, 764
HinfI GANTC 4 cut(s) 674, 845, 1008, 1205
HpaII CCGG 3 cut(s) 345, 602, 1274
HphI GGTGA 9 cut(s) 124, 227, 398, 498, 869, 974, 1262, 1263, 1382
Hpy166II GTNNAC 6 cut(s) 370, 402, 564, 868, 1076, 1209
Hpy188I TCNGA 2 cut(s) 300, 844
Hpy188III TCNNGA 6 cut(s) 239, 718, 823, 956, 1028, 1403
Hpy8I GTNNAC 6 cut(s) 370, 402, 564, 868, 1076, 1209
Hpy99I CGWCG 1 cut(s) 1213
HpyAV CCTTC 4 cut(s) 206, 530, 938, 1138
HpyCH4III ACNGT 1 cut(s) 702
HpyCH4IV ACGT 4 cut(s) 645, 1078, 1211, 1234
HpyCH4V TGCA 5 cut(s) 90, 118, 321, 387, 858
HpyF10VI GCNNNNNNNGC 2 cut(s) 393, 438
HpyF3I CTNAG 2 cut(s) 175, 291
HpySE526I ACGT 4 cut(s) 645, 1078, 1211, 1234
Hsp92I GRCGYC 1 cut(s) 1078
Hsp92II CATG 8 cut(s) 196, 224, 330, 626, 632, 791, 852, 935
HspAI GCGC 1 cut(s) 382
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 4 cut(s) 217, 678, 874, 1045
LguI GCTCTTC 1 cut(s) 1262
LmnI GCTCC 2 cut(s) 249, 935
Lsp1109I GCAGC 4 cut(s) 22, 74, 102, 371
LweI GCATC 5 cut(s) 291, 1093, 1098, 1295, 1363
MaeI CTAG 3 cut(s) 42, 1082, 1395
MaeII ACGT 4 cut(s) 645, 1078, 1211, 1234
MaeIII GTNAC 1 cut(s) 347
MalI GATC 4 cut(s) 219, 680, 876, 1047
MboI GATC 4 cut(s) 217, 678, 874, 1045
MboII GAAGA 5 cut(s) 891, 1043, 1249, 1260, 1321
MfeI CAATTG 2 cut(s) 1059, 1335
MhlI GDGCHC 3 cut(s) 246, 940, 1257
MluCI AATT 8 cut(s) 234, 1059, 1118, 1183, 1225, 1239, 1335, 1389
MlyI GAGTC 2 cut(s) 683, 1214
MmeI TCCRAC 2 cut(s) 1034, 1107
MseI TTAA 8 cut(s) 26, 657, 723, 815, 888, 1121, 1388, 1421
MslI CAYNNNNRTG 5 cut(s) 627, 853, 909, 1248, 1299
MspA1I CMGCKG 1 cut(s) 115
MspCI CTTAAG 1 cut(s) 1420
MspI CCGG 3 cut(s) 345, 602, 1274
MunI CAATTG 2 cut(s) 1059, 1335
MvnI CGCG 1 cut(s) 432
MwoI GCNNNNNNNGC 2 cut(s) 393, 438
NdeI CATATG 1 cut(s) 260
NdeII GATC 4 cut(s) 217, 678, 874, 1045
NlaIII CATG 8 cut(s) 196, 224, 330, 626, 632, 791, 852, 935
NlaIV GGNNCC 1 cut(s) 937
OliI CACNNNNGTG 1 cut(s) 1248
PaeR7I CTCGAG 1 cut(s) 821
PaqCI CACCTGC 1 cut(s) 517
PciSI GCTCTTC 1 cut(s) 1262
PfeI GAWTC 2 cut(s) 845, 1008
PinAI ACCGGT 1 cut(s) 601
PkrI GCNGC 7 cut(s) 12, 89, 114, 117, 124, 146, 386
PleI GAGTC 2 cut(s) 682, 1213
PpsI GAGTC 2 cut(s) 682, 1213
Ppu21I YACGTR 1 cut(s) 1235
PshBI ATTAAT 1 cut(s) 1121
PsiI TTATAA 2 cut(s) 1326, 1429
Psp124BI GAGCTC 2 cut(s) 246, 1257
PspEI GGTNACC 1 cut(s) 347
PspN4I GGNNCC 1 cut(s) 937
PspPI GGNCC 2 cut(s) 330, 640
RsaI GTAC 6 cut(s) 401, 502, 565, 1214, 1237, 1281
RsaNI GTAC 6 cut(s) 400, 501, 564, 1213, 1236, 1280
RseI CAYNNNNRTG 5 cut(s) 627, 853, 909, 1248, 1299
SacI GAGCTC 2 cut(s) 246, 1257
SalI GTCGAC 1 cut(s) 1207
SapI GCTCTTC 1 cut(s) 1262
SaqAI TTAA 8 cut(s) 26, 657, 723, 815, 888, 1121, 1388, 1421
SatI GCNGC 7 cut(s) 11, 88, 113, 116, 123, 145, 385
Sau3AI GATC 4 cut(s) 217, 678, 874, 1045
Sau96I GGNCC 2 cut(s) 330, 640
SchI GAGTC 2 cut(s) 683, 1214
SduI GDGCHC 3 cut(s) 246, 940, 1257
SfaNI GCATC 5 cut(s) 291, 1093, 1098, 1295, 1363
SfcI CTRYAG 1 cut(s) 51
Sfr274I CTCGAG 1 cut(s) 821
SinI GGWCC 2 cut(s) 330, 640
SlaI CTCGAG 1 cut(s) 821
SmiMI CAYNNNNRTG 5 cut(s) 627, 853, 909, 1248, 1299
SmlI CTYRAG 2 cut(s) 821, 1420
SmoI CTYRAG 2 cut(s) 821, 1420
SnaBI TACGTA 1 cut(s) 1235
SpeI ACTAGT 1 cut(s) 1394
Sse9I AATT 8 cut(s) 234, 1059, 1118, 1183, 1225, 1239, 1335, 1389
SsiI CCGC 7 cut(s) 113, 123, 145, 304, 430, 1201, 1360
SspMI CTAG 3 cut(s) 42, 1082, 1395
SstI GAGCTC 2 cut(s) 246, 1257
StyI CCWWGG 2 cut(s) 41, 994
TaaI ACNGT 1 cut(s) 702
TaiI ACGT 4 cut(s) 648, 1081, 1214, 1237
TaqI TCGA 5 cut(s) 5, 677, 822, 873, 1208
TasI AATT 8 cut(s) 234, 1059, 1118, 1183, 1225, 1239, 1335, 1389
TatI WGTACW 2 cut(s) 563, 1279
TauI GCSGC 3 cut(s) 115, 125, 147
TfiI GAWTC 2 cut(s) 845, 1008
Tru1I TTAA 8 cut(s) 26, 657, 723, 815, 888, 1121, 1388, 1421
Tru9I TTAA 8 cut(s) 26, 657, 723, 815, 888, 1121, 1388, 1421
TscAI CASTG 6 cut(s) 97, 156, 534, 566, 673, 705
TseI GCWGC 4 cut(s) 10, 87, 115, 384
TspDTI ATGAA 6 cut(s) 638, 639, 837, 920, 1249, 1322
TspGWI ACGGA 1 cut(s) 448
TspRI CASTG 6 cut(s) 97, 156, 534, 566, 673, 705
Vha464I CTTAAG 1 cut(s) 1420
VpaK11BI GGWCC 2 cut(s) 330, 640
VspI ATTAAT 1 cut(s) 1121
XagI CCTNNNNNAGG 1 cut(s) 998
XapI RAATTY 1 cut(s) 1225
XcmI CCANNNNNNNNNTGG 1 cut(s) 479
XhoI CTCGAG 1 cut(s) 821
XmaJI CCTAGG 1 cut(s) 41
XmiI GTMKAC 2 cut(s) 867, 1208
XspI CTAG 3 cut(s) 42, 1082, 1395
ZraI GACGTC 1 cut(s) 1079
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.