FvH4_7g33810

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000289
Physical Location & Seq
Reverse (-)
23967117 .. 23971955
4839 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g33810.t1

Sequence Viewer

Length: 1449 bp
ATGGCTAAACGCATACGCATGGAGGACTCAGTCGTAGACGTCCCTAATAAACGCAGACGCATGGAATCATCAGTTGCTGAACGCGTCGTCCAGCAGGAGCTCCTCCCAAGAGATGTTCAATTTCAGATCCTCTCAAGGTTACCGGTCAAGCCGCTGATGCGCTGCAAGCTCGTATGCAAGTCATGGTCCTCTCGCATCCGTGATCCACTCTTTGCCAGGGCTCACCAAACCATTCACAAGAACCAACACACGACTAACCTTTTCCTCACCACCTGTAACCCACACACAAAAGAACCTAACAACTTGTTCTCGATACAAGTCAAGCATGATGAATCAGGGAATCTAACTAGTACGCCTCCGGTTCACCTTGGTAGCACTTCATATTTAATGGGGTCTCCATTTTCTACGTCCACCTTTGTGCTTTCAGCCGGCGTTGTCTGTCACTACAGTGATGATGATGAACCTGTTCATATATTCAATCCCTGCACCCGAGAGGTCCTTACTATTCCAATGCAGCGCTCATCGAACCGTGTCAGTCTTGGATTCAGTTCTCTTACAAACGAGTACAAGGTTCTCCGTGGAAGAAAATCGCCGTTTGAATCGTACAAGTTGGAGATTTTAAGTCTAGGTGGTGGTGGTGGTACGTGGAGGGATCTACCGGAGATTGACTATCAAGAACTTGGTCTTGTTCCTAATCTTTTGGATTTCTCGAAATATTATTTGTGCATCCATGGGGCCTTACATTGGATACAACCTGCTACGAATAATCGACCTACTCTCTTGGCTTTTGACGTTGGACAAGAGATATTCAGGGTAATCCCATTCCCCCTGAATAAAAACAGGAATTGGGGACTTCGTTTAATTCAGGTGAACGGATGCTTGGCTGTGTTTGATGTAGATGTACAAGAATATTCTACGGCAATGGATTTCTGGATTTTGAAGGATTACCAGAATCAAGTTTGGTTCAAGGACAGTATCATCTTTCCTGAACGACGGAACGATTTGGGACTCCCTCGGCCTGTTGGCTCAATCCACACAGGAGAGCTCCTGCTCACTCCGACTCCGACGTCTCAGACCGGCCACGGCTTCGTGCATCTTTACGATATGAAACTTAAAACGTATAATAAAACTGAAATCGTGTTACCCGAGGGTTCCGTAATATCAGCTGCAGGAGCGCCGAAACTGAAACTAGTCGAGGAAATGGATGGATGCTCGTGTTGGTTTGCCAAAGTTGTCTGTGTACTTTTCATTGCCAGTGGGCACAGCTCTGTTGTTGGCCTTATAGCGACAATGACAGACCACTATAATGTTATGGAAGGCGGTGAAAGGTTCGCTGAGAGCATTGATGCTATAGATATTCTCGGAAACCCCAGAGACGTGACCTTGGAAATGATGCTCAAAAGACACACTGGCAATGATGCTCAAAAGACGTGTTGCAGTTTCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

483

Amino Acids

54.41

Weight (kDa)

7.6

Isoelectric Point (pI)

42.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 34 - 71 1.3e-08 F-box domain
F-box-like PF12937 34 - 73 1.3e-08 F-box-like
FBA_3 PF08268 100 - 379 1.6e-34 F-box associated beta propeller domain
FBA_1 PF07734 133 - 320 3.9e-11 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000289)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12771 FvH4_1g24070 FvH4_1g24080 FvH4_1g24081 FvH4_3g05670 FvH4_3g33611 FvH4_3g43191 FvH4_4g07091 FvH4_4g07100 FvH4_4g28510 FvH4_4g28520 FvH4_4g30181 FvH4_4g30190 FvH4_4g34271 FvH4_4g34340 FvH4_5g31290 FvH4_6g37661 FvH4_7g33810
malus_domestica MD02G1067600.v1.1 MD03G1110700.v1.1 MD11G1124100.v1.1 MD11G1124200.v1.1 MD11G1124500.v1.1 MD13G1020600.v1.1 MD16G1019000.v1.1
prunus_persica Prupe.1G283900_v2.0.a1 Prupe.1G284000_v2.0.a1 Prupe.1G285200_v2.0.a1 Prupe.1G285300_v2.0.a1 Prupe.1G285500_v2.0.a1 Prupe.1G285600_v2.0.a1 Prupe.1G286300_v2.0.a1 Prupe.1G300600_v2.0.a1 Prupe.1G300900_v2.0.a1 Prupe.1G333100_v2.0.a1 Prupe.6G093100_v2.0.a1
pyrus_communis pycom02g05360 pycom04g05300 pycom11g10460 pycom11g10470 pycom11g10510 pycom13g01740 pycom13g01750 pycom13g04550
rosa_chinensis RchiOBHm_Chr2g0138411 RchiOBHm_Chr2g0138421 RchiOBHm_Chr4g0399251 RchiOBHm_Chr4g0436521
rosa_laevigata RLG00000005896 RLG00000005933 RLG00000006379 RLG00000006511 RLG00000009284 RLG00000019741 RLG00000019742 RLG00000019743 RLG00000020150 RLG00000024158 RLG00000024159 RLG00000030139 RLG00000032057
rosa_multiflora Rmu_co8310765.1_g000001 Rmu_co8476365.1_g000001 Rmu_sc0001426.1_g000004 Rmu_sc0001534.1_g000001 Rmu_sc0001534.1_g000009 Rmu_sc0001534.1_g000010 Rmu_sc0001556.1_g000019 Rmu_sc0001556.1_g000020 Rmu_sc0001779.1_g000020 Rmu_sc0003130.1_g000005 Rmu_sc0005961.1_g000007 Rmu_sc0025546.1_g000001 Rmu_sc0035131.1_g000001 Rmu_sc0035132.1_g000001
rosa_roxburghii Rroxscaffold_1G00062740 Rroxscaffold_2G00106090 Rroxscaffold_2G00106130 Rroxscaffold_2G00106210 Rroxscaffold_4G00324740 Rroxscaffold_4G00324760
rosa_rugosa Rorug04G0015700 Rorug04G0015800 Rorug04G0294500 Rorug04G0345900 Rorug04G0345900 Rorug05G0013800 Rorug05G0336100 Rorug05G0446400
rosa_samantha Rh2AG399300 Rh2BG407000 Rh2BG407300 Rh2BG407400 Rh2CG385800 Rh2DG419200 Rh4AG093400 Rh4AG348800 Rh4AG401200 Rh4AG406800 Rh4AG406900 Rh4CG101600 Rh4CG371900 Rh4CG428200 Rh4CG428300 Rh4DG085500 Rh4DG085700 Rh4DG351400 Rh4DG365000 Rh4DG408300 Rh4DG408400 Rh5AG108000 Rh5BG104700 Rh5BG411400 Rh5BG523400 Rh5DG103300 Rh5DG425800
rosa_wichuraiana Rw0G008940 Rw1G005620 Rw3G022740 Rw4G030510 Rw4G034940 Rw5G009440 Rw5G037570 Rw5G046580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1066
AatII GACGTC 2 cut(s) 42, 1070
Acc36I ACCTGC 1 cut(s) 763
AccI GTMKAC 1 cut(s) 36
AccII CGCG 1 cut(s) 84
AciI CCGC 2 cut(s) 152, 1320
AclWI GGATC 3 cut(s) 121, 197, 660
AcoI YGGCCR 1 cut(s) 1078
AcyI GRCGYC 2 cut(s) 39, 1067
AfaI GTAC 6 cut(s) 352, 566, 605, 643, 903, 1242
AfeI AGCGCT 1 cut(s) 518
AfiI CCNNNNNNNGG 1 cut(s) 744
AflIII ACRYGT 2 cut(s) 82, 1430
AgeI ACCGGT 1 cut(s) 142
AgsI TTSAA 5 cut(s) 119, 478, 599, 940, 967
AhlI ACTAGT 2 cut(s) 347, 1189
AjiI CACGTC 2 cut(s) 1378, 1431
AjnI CCWGG 1 cut(s) 215
AjuI GAANNNNNNNTTGG 2 cut(s) 863, 895
AleI CACNNNNGTG 2 cut(s) 416, 447
AloI GAACNNNNNNTCC 2 cut(s) 72, 104
AluBI AGCT 5 cut(s) 100, 169, 1045, 1166, 1266
AluI AGCT 5 cut(s) 100, 169, 1045, 1166, 1266
Alw21I GWGCWC 2 cut(s) 102, 1047
Alw26I GTCTC 3 cut(s) 399, 1074, 1368
AlwI GGATC 3 cut(s) 121, 197, 660
AlwNI CAGNNNCTG 1 cut(s) 77
Ama87I CYCGRG 2 cut(s) 489, 1145
Aor51HI AGCGCT 1 cut(s) 518
AoxI GGCC 4 cut(s) 735, 1016, 1078, 1276
ApeKI GCWGC 3 cut(s) 162, 514, 1166
AsiGI ACCGGT 1 cut(s) 142
Asp700I GAANNNNTTC 1 cut(s) 465
AspLEI GCGC 3 cut(s) 162, 519, 1177
AspS9I GGNCC 3 cut(s) 186, 496, 735
AsuHPI GGTGA 5 cut(s) 215, 259, 356, 880, 1334
AvaI CYCGRG 2 cut(s) 489, 1145
AvaII GGWCC 2 cut(s) 186, 496
BaeGI GKGCMC 1 cut(s) 1263
BanII GRGCYC 3 cut(s) 102, 223, 1047
BauI CACGAG 1 cut(s) 1213
Bbv12I GWGCWC 2 cut(s) 102, 1047
BbvI GCAGC 3 cut(s) 149, 526, 1153
BccI CCATC 1 cut(s) 1199
BceAI ACGGC 3 cut(s) 577, 933, 1099
BciT130I CCWGG 1 cut(s) 217
BciVI GTATCC 1 cut(s) 741
BcoDI GTCTC 3 cut(s) 399, 1074, 1368
BcuI ACTAGT 2 cut(s) 347, 1189
BfaI CTAG 3 cut(s) 348, 626, 1190
BfmI CTRYAG 3 cut(s) 445, 1167, 1350
BfoI RGCGCY 2 cut(s) 520, 1178
BfuAI ACCTGC 1 cut(s) 763
BfuI GTATCC 1 cut(s) 741
BisI GCNGC 4 cut(s) 152, 163, 515, 1167
BlsI GCNGC 4 cut(s) 153, 164, 516, 1168
Bme1390I CCNGG 1 cut(s) 217
Bme18I GGWCC 2 cut(s) 186, 496
BmeT110I CYCGRG 2 cut(s) 489, 1145
BmgBI CACGTC 2 cut(s) 1378, 1431
BmgT120I GGNCC 3 cut(s) 186, 496, 735
BmiI GGNNCC 2 cut(s) 736, 1153
BmrFI CCNGG 1 cut(s) 217
BmsI GCATC 9 cut(s) 147, 204, 735, 866, 1102, 1199, 1336, 1383, 1408
BpuEI CTTGAG 1 cut(s) 118
BsaAI YACGTR 1 cut(s) 645
BsaHI GRCGYC 2 cut(s) 39, 1067
BsaI GGTCTC 1 cut(s) 399
BsaJI CCNNGG 8 cut(s) 216, 367, 577, 730, 1013, 1081, 1146, 1383
BsaWI WCCGGW 3 cut(s) 142, 358, 658
BsaXI ACNNNNNCTCC 2 cut(s) 1045, 1075
Bsc4I CCNNNNNNNGG 1 cut(s) 744
Bse118I RCCGGY 3 cut(s) 142, 428, 1076
Bse1I ACTGG 2 cut(s) 1254, 1414
Bse3DI GCAATG 3 cut(s) 927, 1248, 1420
BseBI CCWGG 1 cut(s) 217
BseDI CCNNGG 8 cut(s) 216, 367, 577, 730, 1013, 1081, 1146, 1383
BseGI GGATG 5 cut(s) 195, 726, 881, 1210, 1214
BseLI CCNNNNNNNGG 1 cut(s) 744
BseMI GCAATG 3 cut(s) 927, 1248, 1420
BseMII CTCAG 3 cut(s) 42, 1085, 1326
BseNI ACTGG 2 cut(s) 1254, 1414
BseRI GAGGAG 1 cut(s) 92
BseSI GKGCMC 1 cut(s) 1263
BseXI GCAGC 3 cut(s) 149, 526, 1153
BsgI GTGCAG 1 cut(s) 469
Bsh1236I CGCG 1 cut(s) 84
BshFI GGCC 4 cut(s) 737, 1018, 1080, 1278
BshTI ACCGGT 1 cut(s) 142
BsiHKAI GWGCWC 2 cut(s) 102, 1047
BsiHKCI CYCGRG 2 cut(s) 489, 1145
BsiSI CCGG 5 cut(s) 143, 359, 429, 659, 1077
BslFI GGGAC 3 cut(s) 26, 864, 1020
BslI CCNNNNNNNGG 1 cut(s) 744
BsmAI GTCTC 3 cut(s) 399, 1074, 1368
BsmBI CGTCTC 2 cut(s) 1074, 1368
BsmFI GGGAC 3 cut(s) 26, 864, 1020
BsnI GGCC 4 cut(s) 737, 1018, 1080, 1278
Bso31I GGTCTC 1 cut(s) 399
BsoBI CYCGRG 2 cut(s) 489, 1145
Bsp1286I GDGCHC 4 cut(s) 102, 223, 1047, 1263
Bsp1407I TGTACA 1 cut(s) 901
Bsp143I GATC 3 cut(s) 126, 202, 652
Bsp19I CCATGG 1 cut(s) 730
BspACI CCGC 2 cut(s) 152, 1320
BspANI GGCC 4 cut(s) 737, 1018, 1080, 1278
BspCNI CTCAG 3 cut(s) 41, 1084, 1327
BspFNI CGCG 1 cut(s) 84
BspLI GGNNCC 2 cut(s) 736, 1153
BspMAI CTGCAG 1 cut(s) 1171
BspMI ACCTGC 1 cut(s) 763
BspPI GGATC 3 cut(s) 121, 197, 660
BspTNI GGTCTC 1 cut(s) 399
BsrDI GCAATG 3 cut(s) 927, 1248, 1420
BsrFI RCCGGY 3 cut(s) 142, 428, 1076
BsrGI TGTACA 1 cut(s) 901
BsrI ACTGG 2 cut(s) 1254, 1414
BssAI RCCGGY 3 cut(s) 142, 428, 1076
BssECI CCNNGG 8 cut(s) 216, 367, 577, 730, 1013, 1081, 1146, 1383
BssMI GATC 3 cut(s) 126, 202, 652
BssNI GRCGYC 2 cut(s) 39, 1067
BssSI CACGAG 1 cut(s) 1213
BssT1I CCWWGG 3 cut(s) 367, 730, 1383
Bst2BI CACGAG 1 cut(s) 1213
Bst2UI CCWGG 1 cut(s) 217
Bst4CI ACNGT 3 cut(s) 449, 530, 974
BstACI GRCGYC 2 cut(s) 39, 1067
BstAUI TGTACA 1 cut(s) 901
BstBAI YACGTR 1 cut(s) 645
BstC8I GCNNGC 2 cut(s) 167, 430
BstDEI CTNAG 3 cut(s) 28, 1071, 1335
BstDSI CCRYGG 3 cut(s) 577, 730, 1081
BstEII GGTNACC 1 cut(s) 138
BstF5I GGATG 5 cut(s) 195, 726, 881, 1210, 1214
BstFNI CGCG 1 cut(s) 84
BstH2I RGCGCY 2 cut(s) 520, 1178
BstHHI GCGC 3 cut(s) 162, 519, 1177
BstKTI GATC 3 cut(s) 129, 205, 655
BstMAI GTCTC 3 cut(s) 399, 1074, 1368
BstMBI GATC 3 cut(s) 126, 202, 652
BstMWI GCNNNNNNNGC 3 cut(s) 157, 166, 1172
BstNI CCWGG 1 cut(s) 217
BstPI GGTNACC 1 cut(s) 138
BstSCI CCNGG 1 cut(s) 215
BstSFI CTRYAG 3 cut(s) 445, 1167, 1350
BstSLI GKGCMC 1 cut(s) 1263
BstUI CGCG 1 cut(s) 84
BstV1I GCAGC 3 cut(s) 149, 526, 1153
BstX2I RGATCY 2 cut(s) 126, 652
BstYI RGATCY 2 cut(s) 126, 652
BsuI GTATCC 1 cut(s) 741
BsuRI GGCC 4 cut(s) 737, 1018, 1080, 1278
BtgI CCRYGG 3 cut(s) 577, 730, 1081
BtrI CACGTC 2 cut(s) 1378, 1431
BtsCI GGATG 5 cut(s) 195, 726, 881, 1210, 1214
BtsIMutI CAGTG 3 cut(s) 454, 1261, 1407
BveI ACCTGC 1 cut(s) 763
Cac8I GCNNGC 2 cut(s) 167, 430
CaiI CAGNNNCTG 1 cut(s) 77
CfoI GCGC 3 cut(s) 162, 519, 1177
Cfr10I RCCGGY 3 cut(s) 142, 428, 1076
Cfr13I GGNCC 3 cut(s) 186, 496, 735
CseI GACGC 2 cut(s) 66, 73
Csp6I GTAC 6 cut(s) 351, 565, 604, 642, 902, 1241
CspAI ACCGGT 1 cut(s) 142
CviAII CATG 5 cut(s) 19, 61, 183, 326, 731
CviQI GTAC 6 cut(s) 351, 565, 604, 642, 902, 1241
DdeI CTNAG 3 cut(s) 28, 1071, 1335
DpnI GATC 3 cut(s) 128, 204, 654
DpnII GATC 3 cut(s) 126, 202, 652
DrdI GACNNNNNNGTC 1 cut(s) 1066
DseDI GACNNNNNNGTC 1 cut(s) 1066
EaeI YGGCCR 1 cut(s) 1078
Ecl136II GAGCTC 2 cut(s) 100, 1045
Eco130I CCWWGG 3 cut(s) 367, 730, 1383
Eco24I GRGCYC 3 cut(s) 102, 223, 1047
Eco31I GGTCTC 1 cut(s) 399
Eco47I GGWCC 2 cut(s) 186, 496
Eco47III AGCGCT 1 cut(s) 518
Eco53kI GAGCTC 2 cut(s) 100, 1045
Eco88I CYCGRG 2 cut(s) 489, 1145
Eco91I GGTNACC 1 cut(s) 138
EcoICRI GAGCTC 2 cut(s) 100, 1045
EcoO109I RGGNCCY 2 cut(s) 496, 735
EcoO65I GGTNACC 1 cut(s) 138
EcoRII CCWGG 1 cut(s) 215
EcoT14I CCWWGG 3 cut(s) 367, 730, 1383
EcoT38I GRGCYC 3 cut(s) 102, 223, 1047
ErhI CCWWGG 3 cut(s) 367, 730, 1383
Esp3I CGTCTC 2 cut(s) 1074, 1368
FaeI CATG 5 cut(s) 22, 64, 186, 329, 734
FaqI GGGAC 3 cut(s) 26, 864, 1020
FatI CATG 5 cut(s) 18, 60, 182, 325, 730
FblI GTMKAC 1 cut(s) 36
Fnu4HI GCNGC 4 cut(s) 152, 163, 515, 1167
FokI GGATG 5 cut(s) 182, 713, 888, 1217, 1221
FriOI GRGCYC 3 cut(s) 102, 223, 1047
Fsp4HI GCNGC 4 cut(s) 152, 163, 515, 1167
FspBI CTAG 3 cut(s) 348, 626, 1190
GlaI GCGC 3 cut(s) 161, 518, 1176
GluI GCNGC 4 cut(s) 152, 163, 515, 1167
HaeII RGCGCY 2 cut(s) 520, 1178
HaeIII GGCC 4 cut(s) 737, 1018, 1080, 1278
HapII CCGG 5 cut(s) 143, 359, 429, 659, 1077
HgaI GACGC 2 cut(s) 66, 73
HhaI GCGC 3 cut(s) 162, 519, 1177
Hin1I GRCGYC 2 cut(s) 39, 1067
Hin1II CATG 5 cut(s) 22, 64, 186, 329, 734
Hin6I GCGC 3 cut(s) 160, 517, 1175
HinP1I GCGC 3 cut(s) 160, 517, 1175
HinfI GANTC 9 cut(s) 26, 65, 332, 340, 543, 599, 952, 1008, 1060
HpaII CCGG 5 cut(s) 143, 359, 429, 659, 1077
HphI GGTGA 5 cut(s) 215, 259, 356, 880, 1334
Hpy166II GTNNAC 5 cut(s) 37, 364, 411, 871, 1241
Hpy188I TCNGA 5 cut(s) 126, 1059, 1065, 1074, 1364
Hpy188III TCNNGA 5 cut(s) 310, 674, 709, 931, 986
Hpy8I GTNNAC 5 cut(s) 37, 364, 411, 871, 1241
Hpy99I CGWCG 3 cut(s) 89, 996, 1069
HpyAV CCTTC 2 cut(s) 934, 1310
HpyCH4III ACNGT 3 cut(s) 449, 530, 974
HpyCH4IV ACGT 8 cut(s) 39, 407, 644, 792, 1067, 1118, 1377, 1430
HpyCH4V TGCA 8 cut(s) 165, 177, 486, 514, 726, 1093, 1169, 1437
HpyF10VI GCNNNNNNNGC 3 cut(s) 157, 166, 1172
HpyF3I CTNAG 3 cut(s) 28, 1071, 1335
HpySE526I ACGT 8 cut(s) 39, 407, 644, 792, 1067, 1118, 1377, 1430
Hsp92I GRCGYC 2 cut(s) 39, 1067
Hsp92II CATG 5 cut(s) 22, 64, 186, 329, 734
HspAI GCGC 3 cut(s) 160, 517, 1175
KroI GCCGGC 1 cut(s) 428
KroNI GCCGGC 1 cut(s) 430
Kzo9I GATC 3 cut(s) 126, 202, 652
LmnI GCTCC 4 cut(s) 97, 105, 1050, 1172
Lsp1109I GCAGC 3 cut(s) 149, 526, 1153
LweI GCATC 9 cut(s) 147, 204, 735, 866, 1102, 1199, 1336, 1383, 1408
MaeI CTAG 3 cut(s) 348, 626, 1190
MaeII ACGT 8 cut(s) 39, 407, 644, 792, 1067, 1118, 1377, 1430
MaeIII GTNAC 5 cut(s) 138, 275, 440, 1140, 1378
MalI GATC 3 cut(s) 128, 204, 654
MboI GATC 3 cut(s) 126, 202, 652
MboII GAAGA 1 cut(s) 594
MflI RGATCY 2 cut(s) 126, 652
MhlI GDGCHC 4 cut(s) 102, 223, 1047, 1263
MluCI AATT 3 cut(s) 119, 844, 861
MluI ACGCGT 1 cut(s) 82
MlyI GAGTC 3 cut(s) 20, 1002, 1054
MmeI TCCRAC 4 cut(s) 591, 775, 1082, 1088
MroNI GCCGGC 1 cut(s) 428
MroXI GAANNNNTTC 1 cut(s) 465
MseI TTAA 5 cut(s) 386, 620, 860, 1113, 1447
MslI CAYNNNNRTG 4 cut(s) 17, 416, 447, 1305
MspA1I CMGCKG 2 cut(s) 154, 1166
MspI CCGG 5 cut(s) 143, 359, 429, 659, 1077
MspR9I CCNGG 1 cut(s) 217
MvaI CCWGG 1 cut(s) 217
MvnI CGCG 1 cut(s) 84
MwoI GCNNNNNNNGC 3 cut(s) 157, 166, 1172
NaeI GCCGGC 1 cut(s) 430
NcoI CCATGG 1 cut(s) 730
NdeII GATC 3 cut(s) 126, 202, 652
NgoMIV GCCGGC 1 cut(s) 428
NlaIII CATG 5 cut(s) 22, 64, 186, 329, 734
NlaIV GGNNCC 2 cut(s) 736, 1153
NmeAIII GCCGAG 1 cut(s) 994
NmuCI GTSAC 2 cut(s) 440, 1378
OliI CACNNNNGTG 2 cut(s) 416, 447
PcsI WCGNNNNNNNCGW 1 cut(s) 1143
PdiI GCCGGC 1 cut(s) 430
PdmI GAANNNNTTC 1 cut(s) 465
PfeI GAWTC 6 cut(s) 65, 332, 340, 543, 599, 952
PflFI GACNNNGTC 1 cut(s) 29
PinAI ACCGGT 1 cut(s) 142
PkrI GCNGC 4 cut(s) 153, 164, 516, 1168
PleI GAGTC 3 cut(s) 20, 1002, 1054
PpsI GAGTC 3 cut(s) 20, 1002, 1054
Ppu21I YACGTR 1 cut(s) 645
PpuMI RGGWCCY 1 cut(s) 496
Psp124BI GAGCTC 2 cut(s) 102, 1047
Psp5II RGGWCCY 1 cut(s) 496
Psp6I CCWGG 1 cut(s) 215
PspEI GGTNACC 1 cut(s) 138
PspGI CCWGG 1 cut(s) 215
PspN4I GGNNCC 2 cut(s) 736, 1153
PspPI GGNCC 3 cut(s) 186, 496, 735
PspPPI RGGWCCY 1 cut(s) 496
PstI CTGCAG 1 cut(s) 1171
PstNI CAGNNNCTG 1 cut(s) 77
PsuI RGATCY 2 cut(s) 126, 652
PsyI GACNNNGTC 1 cut(s) 29
PvuII CAGCTG 1 cut(s) 1166
RsaI GTAC 6 cut(s) 352, 566, 605, 643, 903, 1242
RsaNI GTAC 6 cut(s) 351, 565, 604, 642, 902, 1241
RseI CAYNNNNRTG 4 cut(s) 17, 416, 447, 1305
SacI GAGCTC 2 cut(s) 102, 1047
SaqAI TTAA 5 cut(s) 386, 620, 860, 1113, 1447
SatI GCNGC 4 cut(s) 152, 163, 515, 1167
Sau3AI GATC 3 cut(s) 126, 202, 652
Sau96I GGNCC 3 cut(s) 186, 496, 735
SchI GAGTC 3 cut(s) 20, 1002, 1054
ScrFI CCNGG 1 cut(s) 217
SduI GDGCHC 4 cut(s) 102, 223, 1047, 1263
SfaNI GCATC 9 cut(s) 147, 204, 735, 866, 1102, 1199, 1336, 1383, 1408
SfcI CTRYAG 3 cut(s) 445, 1167, 1350
SinI GGWCC 2 cut(s) 186, 496
SmiMI CAYNNNNRTG 4 cut(s) 17, 416, 447, 1305
SmlI CTYRAG 1 cut(s) 133
SmoI CTYRAG 1 cut(s) 133
SpeI ACTAGT 2 cut(s) 347, 1189
Sse9I AATT 3 cut(s) 119, 844, 861
SsiI CCGC 2 cut(s) 152, 1320
SspI AATATT 2 cut(s) 716, 911
SspMI CTAG 3 cut(s) 348, 626, 1190
SstI GAGCTC 2 cut(s) 102, 1047
StyD4I CCNGG 1 cut(s) 215
StyI CCWWGG 3 cut(s) 367, 730, 1383
TaaI ACNGT 3 cut(s) 449, 530, 974
TaiI ACGT 8 cut(s) 42, 410, 647, 795, 1070, 1121, 1380, 1433
TaqI TCGA 5 cut(s) 311, 524, 710, 769, 1194
TasI AATT 3 cut(s) 119, 844, 861
TatI WGTACW 3 cut(s) 564, 901, 1240
TauI GCSGC 1 cut(s) 154
TfiI GAWTC 6 cut(s) 65, 332, 340, 543, 599, 952
Tru1I TTAA 5 cut(s) 386, 620, 860, 1113, 1447
Tru9I TTAA 5 cut(s) 386, 620, 860, 1113, 1447
TscAI CASTG 3 cut(s) 454, 1261, 1414
TseFI GTSAC 2 cut(s) 440, 1378
TseI GCWGC 3 cut(s) 162, 514, 1166
Tsp45I GTSAC 2 cut(s) 440, 1378
TspDTI ATGAA 6 cut(s) 345, 369, 458, 474, 1121, 1237
TspGWI ACGGA 5 cut(s) 188, 566, 888, 1009, 1144
TspRI CASTG 3 cut(s) 454, 1261, 1414
Tth111I GACNNNGTC 1 cut(s) 29
VpaK11BI GGWCC 2 cut(s) 186, 496
XmiI GTMKAC 1 cut(s) 36
XmnI GAANNNNTTC 1 cut(s) 465
XspI CTAG 3 cut(s) 348, 626, 1190
ZraI GACGTC 2 cut(s) 40, 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.