MD13G1020600.v1.1

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0000289
Physical Location & Seq
Reverse (-)
1296387 .. 1298200
1814 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1020600.v1.1.491

Sequence Viewer

Length: 1257 bp
ATGGAAGTAGCTGAAGACGAAGGCGATGATGTTCCGAAAATTCCATCACTATTTACGGAGCTCCCAAATGAAATCATATGGTTTCAGATACTTCCAAAGCTACCAGCCAAGTCTCTGATGCGGTTCAAATGTGTTTCCAAGGCGTGGTTCGCTCTCATCACCCGAAACCCTTCCTTTCTCAGCGCCTACCGAAACCTGCATTCCAATCGAAACACCAGTCTCCTCCTCCTCGATCTCAGGAACATTGACACGAAGCAGCAACACATTATGTCCCTCCATATCAACCAAGATGGCAGTCCCTCACCCGCCGGCGCCACCCACCTTCTAACACTAGAGCCCCAAGAGTACAGTCTCCCCAATGTACTGTGTACCAACGGCTTGGCTTGTTTTATCTTTATTCATGAGCACCGCATTCGCGTATTTAATCCCTGCACCCGAGAGTCCATAACCCTTCCCTCCACTTCCAATTCACCCACCAGCTACCAATCTACTTCACCGGACGTCAAACCCTGGGGAGCCGAGATTGGATATGGCTTTGGATTTAGTCCCACTACAGACGAGTATATGGTTGTTCAACTCGAGCTATGCAGGTTTTTACACCAAGAGCCTGCGAATTTTTACAGGGTTGATGCAAGTATTAACCTCCAGGTTTTCACACTGGGTAGTGCAGAGCCGTGGAGGCGCGTAGAGGTGGAGCACGATGATCTCCCATTTGATCATACTTTTTGGCGCATTGACATGAAAAGTGTGTGCCTCCATGGAGCCATACATTGGACACATGACGAAGAGAAATGTGTAGTGGTATATGACCTTGGAGAGCAAAGATTCAGAGTCATCCCATTTCCTCCAGAATTTGATGGTAACAGCCATCATTTTTGGGCAATTGTTGATGTGGGCGGATGTCTAGCGCTCACATATGACAAGGAGACGACTTCAACTTCATATTTAGCAGGGTTAGAGTTGTGGATTTTGAAGGACTATCAAGATCAAGTATGGGTTAAGGAGGTTTTCGCCGTTACATATTCTTTGCATTCGTTTACAACATACCCTTACAGTTGCTTATGTGCAATCCACACCGGTGAGATCTTGATCGAATCCGGAGCACTATCCCAAGCATTTCTTCATTTTTACGATATGAAGAATCAAAGCTTCCGGGAAAGTTCAATCGTTGTGCCTGAATGGCTATGTAGGAAGGATGCTAATATTAGATGGGACGTTATTTCTTGTTATGATGAAACGATTGCCCCCGTGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_3

Protein Analysis

419

Amino Acids

47.94

Weight (kDa)

5.29

Isoelectric Point (pI)

52.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 86 - 338 5.6e-11 F-box associated beta propeller domain
FBA_3 PF08268 92 - 389 8.8e-32 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000289)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12771 FvH4_1g24070 FvH4_1g24080 FvH4_1g24081 FvH4_3g05670 FvH4_3g33611 FvH4_3g43191 FvH4_4g07091 FvH4_4g07100 FvH4_4g28510 FvH4_4g28520 FvH4_4g30181 FvH4_4g30190 FvH4_4g34271 FvH4_4g34340 FvH4_5g31290 FvH4_6g37661 FvH4_7g33810
malus_domestica MD02G1067600.v1.1 MD03G1110700.v1.1 MD11G1124100.v1.1 MD11G1124200.v1.1 MD11G1124500.v1.1 MD13G1020600.v1.1 MD16G1019000.v1.1
prunus_persica Prupe.1G283900_v2.0.a1 Prupe.1G284000_v2.0.a1 Prupe.1G285200_v2.0.a1 Prupe.1G285300_v2.0.a1 Prupe.1G285500_v2.0.a1 Prupe.1G285600_v2.0.a1 Prupe.1G286300_v2.0.a1 Prupe.1G300600_v2.0.a1 Prupe.1G300900_v2.0.a1 Prupe.1G333100_v2.0.a1 Prupe.6G093100_v2.0.a1
pyrus_communis pycom02g05360 pycom04g05300 pycom11g10460 pycom11g10470 pycom11g10510 pycom13g01740 pycom13g01750 pycom13g04550
rosa_chinensis RchiOBHm_Chr2g0138411 RchiOBHm_Chr2g0138421 RchiOBHm_Chr4g0399251 RchiOBHm_Chr4g0436521
rosa_laevigata RLG00000005896 RLG00000005933 RLG00000006379 RLG00000006511 RLG00000009284 RLG00000019741 RLG00000019742 RLG00000019743 RLG00000020150 RLG00000024158 RLG00000024159 RLG00000030139 RLG00000032057
rosa_multiflora Rmu_co8310765.1_g000001 Rmu_co8476365.1_g000001 Rmu_sc0001426.1_g000004 Rmu_sc0001534.1_g000001 Rmu_sc0001534.1_g000009 Rmu_sc0001534.1_g000010 Rmu_sc0001556.1_g000019 Rmu_sc0001556.1_g000020 Rmu_sc0001779.1_g000020 Rmu_sc0003130.1_g000005 Rmu_sc0005961.1_g000007 Rmu_sc0025546.1_g000001 Rmu_sc0035131.1_g000001 Rmu_sc0035132.1_g000001
rosa_roxburghii Rroxscaffold_1G00062740 Rroxscaffold_2G00106090 Rroxscaffold_2G00106130 Rroxscaffold_2G00106210 Rroxscaffold_4G00324740 Rroxscaffold_4G00324760
rosa_rugosa Rorug04G0015700 Rorug04G0015800 Rorug04G0294500 Rorug04G0345900 Rorug04G0345900 Rorug05G0013800 Rorug05G0336100 Rorug05G0446400
rosa_samantha Rh2AG399300 Rh2BG407000 Rh2BG407300 Rh2BG407400 Rh2CG385800 Rh2DG419200 Rh4AG093400 Rh4AG348800 Rh4AG401200 Rh4AG406800 Rh4AG406900 Rh4CG101600 Rh4CG371900 Rh4CG428200 Rh4CG428300 Rh4DG085500 Rh4DG085700 Rh4DG351400 Rh4DG365000 Rh4DG408300 Rh4DG408400 Rh5AG108000 Rh5BG104700 Rh5BG411400 Rh5BG523400 Rh5DG103300 Rh5DG425800
rosa_wichuraiana Rw0G008940 Rw1G005620 Rw3G022740 Rw4G030510 Rw4G034940 Rw5G009440 Rw5G037570 Rw5G046580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 504
Acc36I ACCTGC 2 cut(s) 204, 579
AccB1I GGYRCC 1 cut(s) 311
AccB7I CCANNNNNTGG 2 cut(s) 144, 771
AccII CGCG 2 cut(s) 417, 684
AccIII TCCGGA 1 cut(s) 1097
AciI CCGC 4 cut(s) 121, 306, 409, 897
AcsI RAATTY 3 cut(s) 39, 613, 851
AcuI CTGAAG 1 cut(s) 33
AcyI GRCGYC 2 cut(s) 312, 501
AfaI GTAC 3 cut(s) 347, 363, 370
AfeI AGCGCT 1 cut(s) 909
AfiI CCNNNNNNNGG 2 cut(s) 144, 771
AgeI ACCGGT 1 cut(s) 1076
AgsI TTSAA 5 cut(s) 127, 575, 936, 973, 1164
AjnI CCWGG 2 cut(s) 509, 645
AjuI GAANNNNNNNTTGG 4 cut(s) 131, 163, 1104, 1136
AleI CACNNNNGTG 1 cut(s) 1077
AluBI AGCT 6 cut(s) 11, 61, 100, 480, 583, 1149
AluI AGCT 6 cut(s) 11, 61, 100, 480, 583, 1149
Alw21I GWGCWC 4 cut(s) 63, 408, 699, 1105
Alw26I GTCTC 4 cut(s) 117, 224, 356, 920
Ama87I CYCGRG 2 cut(s) 435, 578
Aor13HI TCCGGA 1 cut(s) 1097
Aor51HI AGCGCT 1 cut(s) 909
ApeKI GCWGC 1 cut(s) 256
ApoI RAATTY 3 cut(s) 39, 613, 851
ArsI GACNNNNNNTTYG 2 cut(s) 202, 234
AsiGI ACCGGT 1 cut(s) 1076
Asp700I GAANNNNTTC 1 cut(s) 169
AspLEI GCGC 5 cut(s) 185, 314, 684, 732, 910
AsuC2I CCSGG 1 cut(s) 1154
AsuHPI GGTGA 5 cut(s) 151, 294, 462, 486, 1091
AvaI CYCGRG 2 cut(s) 435, 578
BanI GGYRCC 1 cut(s) 311
BanII GRGCYC 2 cut(s) 63, 339
BbsI GAAGAC 1 cut(s) 21
Bbv12I GWGCWC 4 cut(s) 63, 408, 699, 1105
BbvI GCAGC 1 cut(s) 268
BccI CCATC 5 cut(s) 52, 284, 851, 876, 1203
BceAI ACGGC 3 cut(s) 391, 658, 998
BcgI CGANNNNNNTGC 4 cut(s) 188, 222, 395, 429
BciT130I CCWGG 2 cut(s) 511, 647
BclI TGATCA 1 cut(s) 715
BcnI CCSGG 1 cut(s) 1154
BcoDI GTCTC 4 cut(s) 117, 224, 356, 920
BfaI CTAG 2 cut(s) 332, 905
BfmI CTRYAG 1 cut(s) 552
BfoI RGCGCY 3 cut(s) 186, 315, 911
BfuAI ACCTGC 2 cut(s) 204, 579
BglI GCCNNNNNGGC 2 cut(s) 679, 1180
BglII AGATCT 1 cut(s) 1083
BisI GCNGC 1 cut(s) 257
BlsI GCNGC 1 cut(s) 258
Bme1390I CCNGG 3 cut(s) 511, 647, 1154
BmeT110I CYCGRG 2 cut(s) 435, 578
BmiI GGNNCC 3 cut(s) 313, 517, 763
BmrFI CCNGG 3 cut(s) 511, 647, 1154
BmrI ACTGGG 1 cut(s) 668
BmsI GCATC 3 cut(s) 108, 619, 1186
BmuI ACTGGG 1 cut(s) 668
BpiI GAAGAC 1 cut(s) 21
BpmI CTGGAG 2 cut(s) 629, 831
BpuMI CCSGG 1 cut(s) 1154
BsaBI GATNNNNATC 1 cut(s) 1088
BsaHI GRCGYC 2 cut(s) 312, 501
BsaJI CCNNGG 6 cut(s) 138, 509, 510, 674, 757, 811
BsaWI WCCGGW 3 cut(s) 496, 1076, 1097
Bsc4I CCNNNNNNNGG 2 cut(s) 144, 771
Bse118I RCCGGY 2 cut(s) 308, 1076
Bse1I ACTGG 2 cut(s) 216, 663
Bse8I GATNNNNATC 1 cut(s) 1088
BseAI TCCGGA 1 cut(s) 1097
BseBI CCWGG 2 cut(s) 511, 647
BseDI CCNNGG 6 cut(s) 138, 509, 510, 674, 757, 811
BseGI GGATG 3 cut(s) 834, 905, 1201
BseJI GATNNNNATC 1 cut(s) 1088
BseLI CCNNNNNNNGG 2 cut(s) 144, 771
BseMII CTCAG 2 cut(s) 193, 250
BseNI ACTGG 2 cut(s) 216, 663
BseRI GAGGAG 3 cut(s) 212, 215, 218
BseXI GCAGC 1 cut(s) 268
BsgI GTGCAG 2 cut(s) 415, 687
Bsh1236I CGCG 2 cut(s) 417, 684
BshNI GGYRCC 1 cut(s) 311
BshTI ACCGGT 1 cut(s) 1076
BsiHKAI GWGCWC 4 cut(s) 63, 408, 699, 1105
BsiHKCI CYCGRG 2 cut(s) 435, 578
BsiSI CCGG 5 cut(s) 309, 497, 1077, 1098, 1153
BslFI GGGAC 4 cut(s) 256, 282, 531, 1226
BslI CCNNNNNNNGG 2 cut(s) 144, 771
BsmAI GTCTC 4 cut(s) 117, 224, 356, 920
BsmBI CGTCTC 1 cut(s) 920
BsmFI GGGAC 4 cut(s) 256, 282, 531, 1226
BsmI GAATGC 3 cut(s) 199, 411, 1030
BsoBI CYCGRG 2 cut(s) 435, 578
Bsp1286I GDGCHC 5 cut(s) 63, 339, 408, 699, 1105
Bsp13I TCCGGA 1 cut(s) 1097
Bsp143I GATC 6 cut(s) 232, 703, 715, 985, 1083, 1089
Bsp19I CCATGG 1 cut(s) 757
BspACI CCGC 4 cut(s) 121, 306, 409, 897
BspCNI CTCAG 2 cut(s) 192, 249
BspEI TCCGGA 1 cut(s) 1097
BspFNI CGCG 2 cut(s) 417, 684
BspHI TCATGA 1 cut(s) 400
BspLI GGNNCC 3 cut(s) 313, 517, 763
BspMI ACCTGC 2 cut(s) 204, 579
BspT107I GGYRCC 1 cut(s) 311
BsrFI RCCGGY 2 cut(s) 308, 1076
BsrI ACTGG 2 cut(s) 216, 663
BssAI RCCGGY 2 cut(s) 308, 1076
BssECI CCNNGG 6 cut(s) 138, 509, 510, 674, 757, 811
BssMI GATC 6 cut(s) 232, 703, 715, 985, 1083, 1089
BssNI GRCGYC 2 cut(s) 312, 501
BssT1I CCWWGG 3 cut(s) 138, 757, 811
Bst2UI CCWGG 2 cut(s) 511, 647
Bst4CI ACNGT 3 cut(s) 350, 366, 1055
Bst6I CTCTTC 1 cut(s) 780
BstACI GRCGYC 2 cut(s) 312, 501
BstC8I GCNNGC 2 cut(s) 310, 609
BstDEI CTNAG 2 cut(s) 179, 236
BstDSI CCRYGG 2 cut(s) 674, 757
BstF5I GGATG 3 cut(s) 834, 905, 1201
BstFNI CGCG 2 cut(s) 417, 684
BstH2I RGCGCY 3 cut(s) 186, 315, 911
BstHHI GCGC 5 cut(s) 185, 314, 684, 732, 910
BstKTI GATC 6 cut(s) 235, 706, 718, 988, 1086, 1092
BstMAI GTCTC 4 cut(s) 117, 224, 356, 920
BstMBI GATC 6 cut(s) 232, 703, 715, 985, 1083, 1089
BstMWI GCNNNNNNNGC 3 cut(s) 149, 679, 1180
BstNI CCWGG 2 cut(s) 511, 647
BstSCI CCNGG 3 cut(s) 509, 645, 1152
BstSFI CTRYAG 1 cut(s) 552
BstUI CGCG 2 cut(s) 417, 684
BstV1I GCAGC 1 cut(s) 268
BstV2I GAAGAC 1 cut(s) 21
BstX2I RGATCY 1 cut(s) 1083
BstXI CCANNNNNNTGG 1 cut(s) 379
BstYI RGATCY 1 cut(s) 1083
BtgI CCRYGG 2 cut(s) 674, 757
BtgZI GCGATG 1 cut(s) 39
BtsCI GGATG 3 cut(s) 834, 905, 1201
BtsIMutI CAGTG 1 cut(s) 656
BveI ACCTGC 2 cut(s) 204, 579
Cac8I GCNNGC 2 cut(s) 310, 609
CciI TCATGA 1 cut(s) 400
CfoI GCGC 5 cut(s) 185, 314, 684, 732, 910
Cfr10I RCCGGY 2 cut(s) 308, 1076
Csp6I GTAC 3 cut(s) 346, 362, 369
CspAI ACCGGT 1 cut(s) 1076
CviAII CATG 4 cut(s) 401, 739, 758, 779
CviQI GTAC 3 cut(s) 346, 362, 369
DdeI CTNAG 2 cut(s) 179, 236
DinI GGCGCC 1 cut(s) 313
DpnI GATC 6 cut(s) 234, 705, 717, 987, 1085, 1091
DpnII GATC 6 cut(s) 232, 703, 715, 985, 1083, 1089
Eam1104I CTCTTC 1 cut(s) 780
EarI CTCTTC 1 cut(s) 780
EciI GGCGGA 1 cut(s) 912
Ecl136II GAGCTC 1 cut(s) 61
Eco130I CCWWGG 3 cut(s) 138, 757, 811
Eco24I GRGCYC 2 cut(s) 63, 339
Eco47III AGCGCT 1 cut(s) 909
Eco53kI GAGCTC 1 cut(s) 61
Eco57I CTGAAG 1 cut(s) 33
Eco88I CYCGRG 2 cut(s) 435, 578
EcoICRI GAGCTC 1 cut(s) 61
EcoRII CCWGG 2 cut(s) 509, 645
EcoT14I CCWWGG 3 cut(s) 138, 757, 811
EcoT38I GRGCYC 2 cut(s) 63, 339
EgeI GGCGCC 1 cut(s) 313
EheI GGCGCC 1 cut(s) 313
ErhI CCWWGG 3 cut(s) 138, 757, 811
Esp3I CGTCTC 1 cut(s) 920
FaeI CATG 4 cut(s) 404, 742, 761, 782
FalI AAGNNNNNCTT 2 cut(s) 1104, 1136
FaqI GGGAC 4 cut(s) 256, 282, 531, 1226
FatI CATG 4 cut(s) 400, 738, 757, 778
FauI CCCGC 1 cut(s) 313
FauNDI CATATG 2 cut(s) 77, 916
FbaI TGATCA 1 cut(s) 715
Fnu4HI GCNGC 1 cut(s) 257
FokI GGATG 3 cut(s) 821, 912, 1208
FriOI GRGCYC 2 cut(s) 63, 339
Fsp4HI GCNGC 1 cut(s) 257
FspBI CTAG 2 cut(s) 332, 905
GlaI GCGC 5 cut(s) 184, 313, 683, 731, 909
GluI GCNGC 1 cut(s) 257
GsuI CTGGAG 2 cut(s) 629, 831
HaeII RGCGCY 3 cut(s) 186, 315, 911
HapII CCGG 5 cut(s) 309, 497, 1077, 1098, 1153
HhaI GCGC 5 cut(s) 185, 314, 684, 732, 910
Hin1I GRCGYC 2 cut(s) 312, 501
Hin1II CATG 4 cut(s) 404, 742, 761, 782
Hin6I GCGC 5 cut(s) 183, 312, 682, 730, 908
HinP1I GCGC 5 cut(s) 183, 312, 682, 730, 908
HindIII AAGCTT 1 cut(s) 1147
HinfI GANTC 5 cut(s) 440, 825, 831, 1094, 1141
HpaII CCGG 5 cut(s) 309, 497, 1077, 1098, 1153
HphI GGTGA 5 cut(s) 151, 294, 462, 486, 1091
Hpy166II GTNNAC 2 cut(s) 369, 1038
Hpy188I TCNGA 4 cut(s) 36, 87, 117, 830
Hpy188III TCNNGA 6 cut(s) 238, 401, 848, 983, 1087, 1098
Hpy8I GTNNAC 2 cut(s) 369, 1038
HpyAV CCTTC 6 cut(s) 14, 180, 332, 461, 967, 1186
HpyCH4III ACNGT 3 cut(s) 350, 366, 1055
HpyCH4IV ACGT 2 cut(s) 501, 1215
HpyCH4V TGCA 7 cut(s) 199, 432, 588, 632, 668, 1030, 1067
HpyF10VI GCNNNNNNNGC 3 cut(s) 149, 679, 1180
HpyF3I CTNAG 2 cut(s) 179, 236
HpySE526I ACGT 2 cut(s) 501, 1215
Hsp92I GRCGYC 2 cut(s) 312, 501
Hsp92II CATG 4 cut(s) 404, 742, 761, 782
HspAI GCGC 5 cut(s) 183, 312, 682, 730, 908
KasI GGCGCC 1 cut(s) 311
Kpn2I TCCGGA 1 cut(s) 1097
KroI GCCGGC 1 cut(s) 308
KroNI GCCGGC 1 cut(s) 310
Ksp22I TGATCA 1 cut(s) 715
Kzo9I GATC 6 cut(s) 232, 703, 715, 985, 1083, 1089
LmnI GCTCC 6 cut(s) 58, 66, 515, 694, 761, 1100
Lsp1109I GCAGC 1 cut(s) 268
LweI GCATC 3 cut(s) 108, 619, 1186
MaeI CTAG 2 cut(s) 332, 905
MaeII ACGT 2 cut(s) 501, 1215
MaeIII GTNAC 2 cut(s) 860, 1015
MalI GATC 6 cut(s) 234, 705, 717, 987, 1085, 1091
MboI GATC 6 cut(s) 232, 703, 715, 985, 1083, 1089
MboII GAAGA 4 cut(s) 26, 797, 1112, 1150
MfeI CAATTG 1 cut(s) 882
MflI RGATCY 1 cut(s) 1083
MhlI GDGCHC 5 cut(s) 63, 339, 408, 699, 1105
MluCI AATT 5 cut(s) 39, 466, 613, 851, 882
Mly113I GGCGCC 1 cut(s) 312
MlyI GAGTC 2 cut(s) 449, 840
MreI CGCCGGCG 1 cut(s) 308
MroI TCCGGA 1 cut(s) 1097
MroNI GCCGGC 1 cut(s) 308
MroXI GAANNNNTTC 1 cut(s) 169
MseI TTAA 3 cut(s) 423, 639, 999
MslI CAYNNNNRTG 2 cut(s) 737, 1077
MspI CCGG 5 cut(s) 309, 497, 1077, 1098, 1153
MspR9I CCNGG 3 cut(s) 511, 647, 1154
MunI CAATTG 1 cut(s) 882
Mva1269I GAATGC 3 cut(s) 199, 411, 1030
MvaI CCWGG 2 cut(s) 511, 647
MvnI CGCG 2 cut(s) 417, 684
MwoI GCNNNNNNNGC 3 cut(s) 149, 679, 1180
NaeI GCCGGC 1 cut(s) 310
NarI GGCGCC 1 cut(s) 312
NciI CCSGG 1 cut(s) 1154
NcoI CCATGG 1 cut(s) 757
NdeI CATATG 2 cut(s) 77, 916
NdeII GATC 6 cut(s) 232, 703, 715, 985, 1083, 1089
NgoMIV GCCGGC 1 cut(s) 308
NlaIII CATG 4 cut(s) 404, 742, 761, 782
NlaIV GGNNCC 3 cut(s) 313, 517, 763
NmeAIII GCCGAG 1 cut(s) 544
OliI CACNNNNGTG 1 cut(s) 1077
PaeR7I CTCGAG 1 cut(s) 578
PagI TCATGA 1 cut(s) 400
PasI CCCWGGG 1 cut(s) 510
PctI GAATGC 3 cut(s) 199, 411, 1030
PdiI GCCGGC 1 cut(s) 310
PdmI GAANNNNTTC 1 cut(s) 169
PfeI GAWTC 3 cut(s) 825, 1094, 1141
PflMI CCANNNNNTGG 2 cut(s) 144, 771
PfoI TCCNGGA 1 cut(s) 1152
PinAI ACCGGT 1 cut(s) 1076
PkrI GCNGC 1 cut(s) 258
PleI GAGTC 2 cut(s) 448, 839
PluTI GGCGCC 1 cut(s) 315
PpsI GAGTC 2 cut(s) 448, 839
Psp124BI GAGCTC 1 cut(s) 63
Psp6I CCWGG 2 cut(s) 509, 645
PspGI CCWGG 2 cut(s) 509, 645
PspN4I GGNNCC 3 cut(s) 313, 517, 763
PspXI VCTCGAGB 1 cut(s) 578
PsuI RGATCY 1 cut(s) 1083
RsaI GTAC 3 cut(s) 347, 363, 370
RsaNI GTAC 3 cut(s) 346, 362, 369
RseI CAYNNNNRTG 2 cut(s) 737, 1077
SacI GAGCTC 1 cut(s) 63
SaqAI TTAA 3 cut(s) 423, 639, 999
SatI GCNGC 1 cut(s) 257
Sau3AI GATC 6 cut(s) 232, 703, 715, 985, 1083, 1089
SchI GAGTC 2 cut(s) 449, 840
ScrFI CCNGG 3 cut(s) 511, 647, 1154
SduI GDGCHC 5 cut(s) 63, 339, 408, 699, 1105
SfaNI GCATC 3 cut(s) 108, 619, 1186
SfcI CTRYAG 1 cut(s) 552
SfoI GGCGCC 1 cut(s) 313
Sfr274I CTCGAG 1 cut(s) 578
SgrAI CRCCGGYG 2 cut(s) 308, 1076
SlaI CTCGAG 1 cut(s) 578
SmiMI CAYNNNNRTG 2 cut(s) 737, 1077
SmlI CTYRAG 1 cut(s) 578
SmoI CTYRAG 1 cut(s) 578
Sse9I AATT 5 cut(s) 39, 466, 613, 851, 882
SsiI CCGC 4 cut(s) 121, 306, 409, 897
SspDI GGCGCC 1 cut(s) 311
SspI AATATT 1 cut(s) 1204
SspMI CTAG 2 cut(s) 332, 905
SstI GAGCTC 1 cut(s) 63
StyD4I CCNGG 3 cut(s) 509, 645, 1152
StyI CCWWGG 3 cut(s) 138, 757, 811
TaaI ACNGT 3 cut(s) 350, 366, 1055
TaiI ACGT 2 cut(s) 504, 1218
TaqI TCGA 4 cut(s) 208, 231, 579, 1092
TasI AATT 5 cut(s) 39, 466, 613, 851, 882
TatI WGTACW 2 cut(s) 345, 361
TfiI GAWTC 3 cut(s) 825, 1094, 1141
Tru1I TTAA 3 cut(s) 423, 639, 999
Tru9I TTAA 3 cut(s) 423, 639, 999
TscAI CASTG 1 cut(s) 663
TseI GCWGC 1 cut(s) 256
TspDTI ATGAA 7 cut(s) 84, 389, 755, 930, 1112, 1151, 1248
TspGWI ACGGA 1 cut(s) 71
TspRI CASTG 1 cut(s) 663
Van91I CCANNNNNTGG 2 cut(s) 144, 771
XapI RAATTY 3 cut(s) 39, 613, 851
XhoI CTCGAG 1 cut(s) 578
XmnI GAANNNNTTC 1 cut(s) 169
XspI CTAG 2 cut(s) 332, 905
ZraI GACGTC 1 cut(s) 502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.