Rorug05G0013800

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000289
Physical Location & Seq
Reverse (-)
907708 .. 911864
4157 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0013800.1

Sequence Viewer

Length: 1632 bp
ATGGAGATCGGGTCGGGTCCGATCGGGTCGTGCTCGAAAGAGCAGCAGAAGATTTACAGGGACTGGTTCAACTTTGTCGATTCAGATGGAGATGGAAGGATTACTGGTAACGAAGGCGCGAAGTTCTTCGCCATGTCCAAGCTTTCTAGGCCCGAACTCAAGCAGGTTTGGGCGATTGCTGATTCGAAACGACAGGGTTTTTTAGGGTTTACCGAGTTCATCACAGCAATGCAGCTGATTTCCTTTGCGCAAGATCATGAATTAAGTCCAGACATCCTCAAAGCTGAAGTTGACTGGGAGAACATTAAACCTCCAGTGATCGAAGGTGTGGATGCTTTAATAGCTAAAACTAAGAGTTCTACAACAAATGGAGTTGCCCTGAATGGAAATGGAATCACTCCTAATCAACCATCAGCTGAACGGACTACTTCAAAATCAGTGAAGAAACTACCTCTGAATGCAGTTACATCTATAAGTGATGGCTTGAAGAAATTGTACATTGAAAAACTAAAACCACTGGAAGCTGCATATCGTTTCAATGATTTTGGTAATCCATTACTGACTAACAGTGATTTTGATGCCAAGCCTATGGTCATGCTTTTGGGTCAGTATTCAACTGGAAAAACAACATTTATAAAGCATTTGTTAAGATGTAACTATCCAGGAGCTCATATTGGGCCAGAGCCTACAACCGATAGATTTGTTGTTGTGATGTCTGGACCTGATGAAAGGAGCATTCCTGGAAATACCATAGCTGTTCATGCAGACATGCCTTTTAGCGGTCTAACAAGTTTTGGAGGTTCATTTCTGTCAAAATTTGAGTGTTCCCAAATGCCTCATCCATTGCTAGATCAAATTACACTTGTGGACACTCCTGGGGTTCTATCTGGAGAAAAGCAACGAACGCAAAGGAGTTATGATTTCACTGGTGTCATATCGTGGTTTGCTGCAAAATGTGATCTCATCCTTCTTCTTTTCGACCCTCATAAGCTTGATATCAGTGATGAATTTAAGCGTGTAATTGCATCTCTACGTGGGCATGATGATAAGATTCGAGTGGTTCTAAACAAAGCAGATCAAGTTGATACTCAACAACTGATGAGAGTTTATGGGGCATTAATGTGGTCACTTGGAAAGGTTTTGAATACTCCAGAGGTTGTGCGTGTTTATATTGGCTCATTTAATGATAAACCTGTCAATGAAGAAGCTGTCGGCCCCATGGGTAGAGAGCTTTTTGAAATGGAACAAGGTGACCTCCTTGCTGACCTGGTTGATATACCAAAGAAAGCTTGTGATCGCCGGATCAATGAATTTGTGAAACGTGCTAGAGCTGCAAAGATTCATGCCTACATAATTAGCCATCTTAAGAAAGAGATGCCTGCAATGATGGGCAAATCTAAGACTCAGAAGCGACTCATGGAAAATCTTGAAGAAGAGTTCGCAAAGGTTCAGAAAGAGTTTCATTTACCAGCAGGCGACTTTCCAAATGTTGAACAATTTCGAGAGGTCTTGAGCAATTACAACATCGACAAATTTGAGAAAGTGAAGCCTAAGATGATTCAAGCTGTAGATGACATGCTTGGATATGAAATCCCGGAGCTCTTGAAGAATCTCAGAAACCCCTATGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

543

Amino Acids

60.89

Weight (kDa)

6.41

Isoelectric Point (pI)

29.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EH PF12763 14 - 87 5.2e-10 EH domain
EF-hand_7 PF13499 23 - 78 7.9e-06 EF-hand domain pair
EHD_N PF16880 161 - 193 6e-15 N-terminal EH-domain containing protein
Dynamin_N PF00350 198 - 358 1.9e-13 Dynamin family
MMR_HSR1 PF01926 198 - 357 3.8e-07 50S ribosome-binding GTPase
DUF5600 PF18150 433 - 534 8.6e-38 Domain of unknown function (DUF5600)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000289)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12771 FvH4_1g24070 FvH4_1g24080 FvH4_1g24081 FvH4_3g05670 FvH4_3g33611 FvH4_3g43191 FvH4_4g07091 FvH4_4g07100 FvH4_4g28510 FvH4_4g28520 FvH4_4g30181 FvH4_4g30190 FvH4_4g34271 FvH4_4g34340 FvH4_5g31290 FvH4_6g37661 FvH4_7g33810
malus_domestica MD02G1067600.v1.1 MD03G1110700.v1.1 MD11G1124100.v1.1 MD11G1124200.v1.1 MD11G1124500.v1.1 MD13G1020600.v1.1 MD16G1019000.v1.1
prunus_persica Prupe.1G283900_v2.0.a1 Prupe.1G284000_v2.0.a1 Prupe.1G285200_v2.0.a1 Prupe.1G285300_v2.0.a1 Prupe.1G285500_v2.0.a1 Prupe.1G285600_v2.0.a1 Prupe.1G286300_v2.0.a1 Prupe.1G300600_v2.0.a1 Prupe.1G300900_v2.0.a1 Prupe.1G333100_v2.0.a1 Prupe.6G093100_v2.0.a1
pyrus_communis pycom02g05360 pycom04g05300 pycom11g10460 pycom11g10470 pycom11g10510 pycom13g01740 pycom13g01750 pycom13g04550
rosa_chinensis RchiOBHm_Chr2g0138411 RchiOBHm_Chr2g0138421 RchiOBHm_Chr4g0399251 RchiOBHm_Chr4g0436521
rosa_laevigata RLG00000005896 RLG00000005933 RLG00000006379 RLG00000006511 RLG00000009284 RLG00000019741 RLG00000019742 RLG00000019743 RLG00000020150 RLG00000024158 RLG00000024159 RLG00000030139 RLG00000032057
rosa_multiflora Rmu_co8310765.1_g000001 Rmu_co8476365.1_g000001 Rmu_sc0001426.1_g000004 Rmu_sc0001534.1_g000001 Rmu_sc0001534.1_g000009 Rmu_sc0001534.1_g000010 Rmu_sc0001556.1_g000019 Rmu_sc0001556.1_g000020 Rmu_sc0001779.1_g000020 Rmu_sc0003130.1_g000005 Rmu_sc0005961.1_g000007 Rmu_sc0025546.1_g000001 Rmu_sc0035131.1_g000001 Rmu_sc0035132.1_g000001
rosa_roxburghii Rroxscaffold_1G00062740 Rroxscaffold_2G00106090 Rroxscaffold_2G00106130 Rroxscaffold_2G00106210 Rroxscaffold_4G00324740 Rroxscaffold_4G00324760
rosa_rugosa Rorug04G0015700 Rorug04G0015800 Rorug04G0294500 Rorug04G0345900 Rorug04G0345900 Rorug05G0013800 Rorug05G0336100 Rorug05G0446400
rosa_samantha Rh2AG399300 Rh2BG407000 Rh2BG407300 Rh2BG407400 Rh2CG385800 Rh2DG419200 Rh4AG093400 Rh4AG348800 Rh4AG401200 Rh4AG406800 Rh4AG406900 Rh4CG101600 Rh4CG371900 Rh4CG428200 Rh4CG428300 Rh4DG085500 Rh4DG085700 Rh4DG351400 Rh4DG365000 Rh4DG408300 Rh4DG408400 Rh5AG108000 Rh5BG104700 Rh5BG411400 Rh5BG523400 Rh5DG103300 Rh5DG425800
rosa_wichuraiana Rw0G008940 Rw1G005620 Rw3G022740 Rw4G030510 Rw4G034940 Rw5G009440 Rw5G037570 Rw5G046580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 635
Acc16I TGCGCA 1 cut(s) 249
Acc36I ACCTGC 1 cut(s) 154
AccII CGCG 1 cut(s) 119
AciI CCGC 1 cut(s) 780
AclWI GGATC 1 cut(s) 1310
AcsI RAATTY 4 cut(s) 815, 1007, 1310, 1532
AcuI CTGAAG 1 cut(s) 306
AfaI GTAC 1 cut(s) 497
AfiI CCNNNNNNNGG 1 cut(s) 779
AflII CTTAAG 1 cut(s) 1364
AjnI CCWGG 4 cut(s) 661, 739, 874, 1266
Alw21I GWGCWC 3 cut(s) 35, 670, 1602
AlwI GGATC 1 cut(s) 1310
AlwNI CAGNNNCTG 1 cut(s) 63
AoxI GGCC 3 cut(s) 149, 677, 1213
ApeKI GCWGC 5 cut(s) 43, 232, 524, 947, 1331
ApoI RAATTY 4 cut(s) 815, 1007, 1310, 1532
AseI ATTAAT 1 cut(s) 1118
Asp700I GAANNNNTTC 2 cut(s) 125, 1497
AspLEI GCGC 2 cut(s) 119, 250
AspS9I GGNCC 5 cut(s) 17, 150, 677, 719, 1214
AsuC2I CCSGG 1 cut(s) 1595
AsuHPI GGTGA 1 cut(s) 1262
AsuII TTCGAA 1 cut(s) 185
AvaII GGWCC 2 cut(s) 17, 719
BanII GRGCYC 2 cut(s) 670, 1602
BarI GAAGNNNNNNTAC 2 cut(s) 479, 511
Bbv12I GWGCWC 3 cut(s) 35, 670, 1602
BbvI GCAGC 5 cut(s) 55, 244, 511, 934, 1318
BccI CCATC 6 cut(s) 80, 86, 418, 473, 1368, 1381
BciT130I CCWGG 4 cut(s) 663, 741, 876, 1268
BcnI CCSGG 1 cut(s) 1595
BfaI CTAG 3 cut(s) 147, 848, 1326
BfmI CTRYAG 1 cut(s) 1566
BfrI CTTAAG 1 cut(s) 1364
BfuAI ACCTGC 1 cut(s) 154
BisI GCNGC 5 cut(s) 44, 233, 525, 948, 1332
BlsI GCNGC 5 cut(s) 45, 234, 526, 949, 1333
Bme1390I CCNGG 5 cut(s) 663, 741, 876, 1268, 1595
Bme18I GGWCC 2 cut(s) 17, 719
BmgT120I GGNCC 5 cut(s) 17, 150, 677, 719, 1214
BmiI GGNNCC 2 cut(s) 18, 1216
BmrFI CCNGG 5 cut(s) 663, 741, 876, 1268, 1595
BmrI ACTGGG 1 cut(s) 304
BmsI GCATC 4 cut(s) 322, 568, 1034, 1365
BmuI ACTGGG 1 cut(s) 304
BpmI CTGGAG 3 cut(s) 297, 909, 1134
Bpu14I TTCGAA 1 cut(s) 185
BpuEI CTTGAG 2 cut(s) 143, 1531
BpuMI CCSGG 1 cut(s) 1595
BsaAI YACGTR 1 cut(s) 1034
BsaJI CCNNGG 2 cut(s) 875, 1218
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 1 cut(s) 779
Bse1I ACTGG 7 cut(s) 68, 109, 299, 314, 522, 622, 931
Bse3DI GCAATG 3 cut(s) 234, 842, 1389
BseBI CCWGG 4 cut(s) 663, 741, 876, 1268
BseDI CCNNGG 2 cut(s) 875, 1218
BseGI GGATG 4 cut(s) 273, 337, 838, 963
BseLI CCNNNNNNNGG 1 cut(s) 779
BseMI GCAATG 3 cut(s) 234, 842, 1389
BseMII CTCAG 2 cut(s) 1418, 1627
BseNI ACTGG 7 cut(s) 68, 109, 299, 314, 522, 622, 931
BseXI GCAGC 5 cut(s) 55, 244, 511, 934, 1318
Bsh1236I CGCG 1 cut(s) 119
Bsh1285I CGRYCG 1 cut(s) 24
BshFI GGCC 3 cut(s) 151, 679, 1215
BsiEI CGRYCG 1 cut(s) 24
BsiHKAI GWGCWC 3 cut(s) 35, 670, 1602
BsiSI CCGG 2 cut(s) 1300, 1595
BslFI GGGAC 1 cut(s) 74
BslI CCNNNNNNNGG 1 cut(s) 779
BsmFI GGGAC 1 cut(s) 74
BsmI GAATGC 2 cut(s) 463, 735
BsnI GGCC 3 cut(s) 151, 679, 1215
Bsp119I TTCGAA 1 cut(s) 185
Bsp1286I GDGCHC 3 cut(s) 35, 670, 1602
Bsp1407I TGTACA 1 cut(s) 495
Bsp143I GATC 9 cut(s) 6, 21, 253, 318, 850, 958, 1075, 1294, 1302
Bsp19I CCATGG 1 cut(s) 1218
BspACI CCGC 1 cut(s) 780
BspANI GGCC 3 cut(s) 151, 679, 1215
BspCNI CTCAG 2 cut(s) 1417, 1626
BspFNI CGCG 1 cut(s) 119
BspHI TCATGA 1 cut(s) 256
BspLI GGNNCC 2 cut(s) 18, 1216
BspMI ACCTGC 1 cut(s) 154
BspPI GGATC 1 cut(s) 1310
BspT104I TTCGAA 1 cut(s) 185
BspTI CTTAAG 1 cut(s) 1364
BsrDI GCAATG 3 cut(s) 234, 842, 1389
BsrGI TGTACA 1 cut(s) 495
BsrI ACTGG 7 cut(s) 68, 109, 299, 314, 522, 622, 931
BssECI CCNNGG 2 cut(s) 875, 1218
BssMI GATC 9 cut(s) 6, 21, 253, 318, 850, 958, 1075, 1294, 1302
BssT1I CCWWGG 1 cut(s) 1218
Bst2UI CCWGG 4 cut(s) 663, 741, 876, 1268
Bst4CI ACNGT 1 cut(s) 569
Bst6I CTCTTC 1 cut(s) 1428
BstAFI CTTAAG 1 cut(s) 1364
BstAUI TGTACA 1 cut(s) 495
BstBAI YACGTR 1 cut(s) 1034
BstBI TTCGAA 1 cut(s) 185
BstC8I GCNNGC 2 cut(s) 1380, 1474
BstDEI CTNAG 5 cut(s) 351, 1398, 1404, 1551, 1613
BstDSI CCRYGG 1 cut(s) 1218
BstEII GGTNACC 1 cut(s) 1250
BstF5I GGATG 4 cut(s) 273, 337, 838, 963
BstFNI CGCG 1 cut(s) 119
BstHHI GCGC 2 cut(s) 119, 250
BstKTI GATC 9 cut(s) 9, 24, 256, 321, 853, 961, 1078, 1297, 1305
BstMBI GATC 9 cut(s) 6, 21, 253, 318, 850, 958, 1075, 1294, 1302
BstMCI CGRYCG 1 cut(s) 24
BstMWI GCNNNNNNNGC 5 cut(s) 148, 341, 761, 904, 1331
BstNI CCWGG 4 cut(s) 663, 741, 876, 1268
BstNSI RCATGY 2 cut(s) 772, 1579
BstPI GGTNACC 1 cut(s) 1250
BstSCI CCNGG 5 cut(s) 661, 739, 874, 1266, 1593
BstSFI CTRYAG 1 cut(s) 1566
BstUI CGCG 1 cut(s) 119
BstV1I GCAGC 5 cut(s) 55, 244, 511, 934, 1318
BstXI CCANNNNNNTGG 1 cut(s) 589
BsuRI GGCC 3 cut(s) 151, 679, 1215
BtgI CCRYGG 1 cut(s) 1218
BtsCI GGATG 4 cut(s) 273, 337, 838, 963
BtsIMutI CAGTG 6 cut(s) 321, 444, 515, 574, 924, 1006
BveI ACCTGC 1 cut(s) 154
Cac8I GCNNGC 2 cut(s) 1380, 1474
CaiI CAGNNNCTG 1 cut(s) 63
CciI TCATGA 1 cut(s) 256
CfoI GCGC 2 cut(s) 119, 250
Cfr13I GGNCC 5 cut(s) 17, 150, 677, 719, 1214
CsiI ACCWGGT 1 cut(s) 1266
Csp6I GTAC 1 cut(s) 496
CviQI GTAC 1 cut(s) 496
DdeI CTNAG 5 cut(s) 351, 1398, 1404, 1551, 1613
DpnI GATC 9 cut(s) 8, 23, 255, 320, 852, 960, 1077, 1296, 1304
DpnII GATC 9 cut(s) 6, 21, 253, 318, 850, 958, 1075, 1294, 1302
Eam1104I CTCTTC 1 cut(s) 1428
EarI CTCTTC 1 cut(s) 1428
Ecl136II GAGCTC 2 cut(s) 668, 1600
Eco130I CCWWGG 1 cut(s) 1218
Eco24I GRGCYC 2 cut(s) 670, 1602
Eco32I GATATC 1 cut(s) 997
Eco47I GGWCC 2 cut(s) 17, 719
Eco53kI GAGCTC 2 cut(s) 668, 1600
Eco57I CTGAAG 1 cut(s) 306
Eco91I GGTNACC 1 cut(s) 1250
EcoICRI GAGCTC 2 cut(s) 668, 1600
EcoO65I GGTNACC 1 cut(s) 1250
EcoRII CCWGG 4 cut(s) 661, 739, 874, 1266
EcoRV GATATC 1 cut(s) 997
EcoT14I CCWWGG 1 cut(s) 1218
EcoT38I GRGCYC 2 cut(s) 670, 1602
ErhI CCWWGG 1 cut(s) 1218
FaqI GGGAC 1 cut(s) 74
Fnu4HI GCNGC 5 cut(s) 44, 233, 525, 948, 1332
FokI GGATG 4 cut(s) 260, 344, 825, 950
FriOI GRGCYC 2 cut(s) 670, 1602
Fsp4HI GCNGC 5 cut(s) 44, 233, 525, 948, 1332
FspBI CTAG 3 cut(s) 147, 848, 1326
FspI TGCGCA 1 cut(s) 249
GlaI GCGC 2 cut(s) 118, 249
GluI GCNGC 5 cut(s) 44, 233, 525, 948, 1332
GsuI CTGGAG 3 cut(s) 297, 909, 1134
HaeIII GGCC 3 cut(s) 151, 679, 1215
HapII CCGG 2 cut(s) 1300, 1595
HhaI GCGC 2 cut(s) 119, 250
Hin6I GCGC 2 cut(s) 117, 248
HinP1I GCGC 2 cut(s) 117, 248
HincII GTYRAC 1 cut(s) 292
HindII GTYRAC 1 cut(s) 292
HindIII AAGCTT 3 cut(s) 140, 989, 1287
HinfI GANTC 9 cut(s) 80, 182, 393, 1051, 1339, 1402, 1413, 1558, 1609
HpaII CCGG 2 cut(s) 1300, 1595
HphI GGTGA 1 cut(s) 1262
Hpy166II GTNNAC 3 cut(s) 210, 292, 868
Hpy188I TCNGA 6 cut(s) 21, 85, 456, 1407, 1452, 1616
Hpy188III TCNNGA 9 cut(s) 257, 269, 717, 888, 1151, 1427, 1502, 1510, 1603
Hpy8I GTNNAC 3 cut(s) 210, 292, 868
HpyAV CCTTC 4 cut(s) 90, 107, 317, 977
HpyCH4III ACNGT 1 cut(s) 569
HpyCH4IV ACGT 2 cut(s) 1033, 1321
HpyCH4V TGCA 8 cut(s) 232, 461, 527, 764, 950, 1025, 1334, 1382
HpyF10VI GCNNNNNNNGC 5 cut(s) 148, 341, 761, 904, 1331
HpyF3I CTNAG 5 cut(s) 351, 1398, 1404, 1551, 1613
HpySE526I ACGT 2 cut(s) 1033, 1321
HspAI GCGC 2 cut(s) 117, 248
Kzo9I GATC 9 cut(s) 6, 21, 253, 318, 850, 958, 1075, 1294, 1302
LmnI GCTCC 3 cut(s) 665, 732, 1597
Lsp1109I GCAGC 5 cut(s) 55, 244, 511, 934, 1318
LweI GCATC 4 cut(s) 322, 568, 1034, 1365
MabI ACCWGGT 1 cut(s) 1266
MaeI CTAG 3 cut(s) 147, 848, 1326
MaeII ACGT 2 cut(s) 1033, 1321
MaeIII GTNAC 5 cut(s) 107, 463, 653, 1125, 1250
MalI GATC 9 cut(s) 8, 23, 255, 320, 852, 960, 1077, 1296, 1304
MboI GATC 9 cut(s) 6, 21, 253, 318, 850, 958, 1075, 1294, 1302
MboII GAAGA 9 cut(s) 61, 118, 454, 499, 962, 1214, 1442, 1445, 1618
MhlI GDGCHC 3 cut(s) 35, 670, 1602
MlyI GAGTC 2 cut(s) 1396, 1407
MnlI CCTC 9 cut(s) 287, 321, 462, 791, 846, 993, 1147, 1265, 1498
MroXI GAANNNNTTC 2 cut(s) 125, 1497
MseI TTAA 9 cut(s) 263, 306, 338, 647, 1011, 1118, 1182, 1365, 1630
MslI CAYNNNNRTG 2 cut(s) 227, 1120
MspA1I CMGCKG 2 cut(s) 235, 416
MspCI CTTAAG 1 cut(s) 1364
MspI CCGG 2 cut(s) 1300, 1595
MspR9I CCNGG 5 cut(s) 663, 741, 876, 1268, 1595
Mva1269I GAATGC 2 cut(s) 463, 735
MvaI CCWGG 4 cut(s) 663, 741, 876, 1268
MvnI CGCG 1 cut(s) 119
MwoI GCNNNNNNNGC 5 cut(s) 148, 341, 761, 904, 1331
NciI CCSGG 1 cut(s) 1595
NcoI CCATGG 1 cut(s) 1218
NdeII GATC 9 cut(s) 6, 21, 253, 318, 850, 958, 1075, 1294, 1302
NlaIV GGNNCC 2 cut(s) 18, 1216
NmuCI GTSAC 2 cut(s) 1125, 1250
NsbI TGCGCA 1 cut(s) 249
NspI RCATGY 2 cut(s) 772, 1579
NspV TTCGAA 1 cut(s) 185
PagI TCATGA 1 cut(s) 256
PctI GAATGC 2 cut(s) 463, 735
PdmI GAANNNNTTC 2 cut(s) 125, 1497
PfeI GAWTC 7 cut(s) 80, 182, 393, 1051, 1339, 1558, 1609
PfoI TCCNGGA 3 cut(s) 661, 739, 1593
PkrI GCNGC 5 cut(s) 45, 234, 526, 949, 1333
Ple19I CGATCG 1 cut(s) 24
PleI GAGTC 2 cut(s) 1396, 1407
PpsI GAGTC 2 cut(s) 1396, 1407
Ppu21I YACGTR 1 cut(s) 1034
PshBI ATTAAT 1 cut(s) 1118
PsiI TTATAA 1 cut(s) 635
Psp124BI GAGCTC 2 cut(s) 670, 1602
Psp6I CCWGG 4 cut(s) 661, 739, 874, 1266
PspEI GGTNACC 1 cut(s) 1250
PspGI CCWGG 4 cut(s) 661, 739, 874, 1266
PspN4I GGNNCC 2 cut(s) 18, 1216
PspPI GGNCC 5 cut(s) 17, 150, 677, 719, 1214
PstNI CAGNNNCTG 1 cut(s) 63
PvuI CGATCG 1 cut(s) 24
PvuII CAGCTG 2 cut(s) 235, 416
RsaI GTAC 1 cut(s) 497
RsaNI GTAC 1 cut(s) 496
RseI CAYNNNNRTG 2 cut(s) 227, 1120
SacI GAGCTC 2 cut(s) 670, 1602
SaqAI TTAA 9 cut(s) 263, 306, 338, 647, 1011, 1118, 1182, 1365, 1630
SatI GCNGC 5 cut(s) 44, 233, 525, 948, 1332
Sau3AI GATC 9 cut(s) 6, 21, 253, 318, 850, 958, 1075, 1294, 1302
Sau96I GGNCC 5 cut(s) 17, 150, 677, 719, 1214
SchI GAGTC 2 cut(s) 1396, 1407
ScrFI CCNGG 5 cut(s) 663, 741, 876, 1268, 1595
SduI GDGCHC 3 cut(s) 35, 670, 1602
SexAI ACCWGGT 1 cut(s) 1266
SfaNI GCATC 4 cut(s) 322, 568, 1034, 1365
SfcI CTRYAG 1 cut(s) 1566
SfuI TTCGAA 1 cut(s) 185
SinI GGWCC 2 cut(s) 17, 719
SmiMI CAYNNNNRTG 2 cut(s) 227, 1120
SmlI CTYRAG 3 cut(s) 158, 1364, 1510
SmoI CTYRAG 3 cut(s) 158, 1364, 1510
SsiI CCGC 1 cut(s) 780
SspMI CTAG 3 cut(s) 147, 848, 1326
SstI GAGCTC 2 cut(s) 670, 1602
StyD4I CCNGG 5 cut(s) 661, 739, 874, 1266, 1593
StyI CCWWGG 1 cut(s) 1218
TaaI ACNGT 1 cut(s) 569
TaiI ACGT 2 cut(s) 1036, 1324
TaqI TCGA 8 cut(s) 35, 78, 185, 321, 978, 1054, 1501, 1527
TatI WGTACW 1 cut(s) 495
TfiI GAWTC 7 cut(s) 80, 182, 393, 1051, 1339, 1558, 1609
Tru1I TTAA 9 cut(s) 263, 306, 338, 647, 1011, 1118, 1182, 1365, 1630
Tru9I TTAA 9 cut(s) 263, 306, 338, 647, 1011, 1118, 1182, 1365, 1630
TscAI CASTG 6 cut(s) 321, 444, 522, 574, 931, 1006
TseFI GTSAC 2 cut(s) 1125, 1250
TseI GCWGC 5 cut(s) 43, 232, 524, 947, 1331
Tsp45I GTSAC 2 cut(s) 1125, 1250
TspGWI ACGGA 1 cut(s) 436
TspRI CASTG 6 cut(s) 321, 444, 522, 574, 931, 1006
Vha464I CTTAAG 1 cut(s) 1364
VpaK11BI GGWCC 2 cut(s) 17, 719
VspI ATTAAT 1 cut(s) 1118
XapI RAATTY 4 cut(s) 815, 1007, 1310, 1532
XceI RCATGY 2 cut(s) 772, 1579
XmnI GAANNNNTTC 2 cut(s) 125, 1497
XspI CTAG 3 cut(s) 147, 848, 1326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.