Agamous-like MADS-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SRF-TF | PF00319 | 10 - 50 | 2.7e-16 | SRF-type transcription factor (DNA-binding and dimerisation domain) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 439 |
| AcuI | CTGAAG | 1 cut(s) | 401 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 63, 439 |
| AflIII | ACRYGT | 2 cut(s) | 196, 219 |
| AgsI | TTSAA | 5 cut(s) | 206, 214, 253, 304, 356 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 249, 281 |
| AluBI | AGCT | 2 cut(s) | 26, 264 |
| AluI | AGCT | 2 cut(s) | 26, 264 |
| Alw26I | GTCTC | 1 cut(s) | 365 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 391, 439 |
| AoxI | GGCC | 1 cut(s) | 173 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 264 |
| AsuHPI | GGTGA | 1 cut(s) | 493 |
| AxyI | CCTNAGG | 1 cut(s) | 165 |
| BccI | CCATC | 2 cut(s) | 394, 446 |
| BcoDI | GTCTC | 1 cut(s) | 365 |
| BfaI | CTAG | 2 cut(s) | 6, 48 |
| BmsI | GCATC | 2 cut(s) | 115, 397 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 266, 298 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 63, 439 |
| Bse1I | ACTGG | 1 cut(s) | 444 |
| Bse21I | CCTNAGG | 1 cut(s) | 165 |
| BseGI | GGATG | 1 cut(s) | 448 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 63, 439 |
| BseMII | CTCAG | 3 cut(s) | 156, 283, 392 |
| BseNI | ACTGG | 1 cut(s) | 444 |
| BshFI | GGCC | 1 cut(s) | 175 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 63, 439 |
| BsmAI | GTCTC | 1 cut(s) | 365 |
| BsnI | GGCC | 1 cut(s) | 175 |
| Bsp143I | GATC | 1 cut(s) | 279 |
| BspANI | GGCC | 1 cut(s) | 175 |
| BspCNI | CTCAG | 3 cut(s) | 157, 282, 391 |
| BspQI | GCTCTTC | 1 cut(s) | 230 |
| BsrI | ACTGG | 1 cut(s) | 444 |
| BssMI | GATC | 1 cut(s) | 279 |
| Bst6I | CTCTTC | 1 cut(s) | 230 |
| BstDEI | CTNAG | 3 cut(s) | 165, 269, 378 |
| BstF5I | GGATG | 1 cut(s) | 448 |
| BstKTI | GATC | 1 cut(s) | 282 |
| BstMAI | GTCTC | 1 cut(s) | 365 |
| BstMBI | GATC | 1 cut(s) | 279 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 53, 340 |
| BstNSI | RCATGY | 3 cut(s) | 132, 200, 223 |
| Bsu36I | CCTNAGG | 1 cut(s) | 165 |
| BsuRI | GGCC | 1 cut(s) | 175 |
| BtsCI | GGATG | 1 cut(s) | 448 |
| CaiI | CAGNNNCTG | 2 cut(s) | 391, 439 |
| CviAII | CATG | 4 cut(s) | 129, 197, 220, 349 |
| CviJI | RGCY | 7 cut(s) | 5, 26, 56, 147, 175, 240, 264 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 26, 56, 147, 175, 240, 264 |
| DdeI | CTNAG | 3 cut(s) | 165, 269, 378 |
| DpnI | GATC | 1 cut(s) | 281 |
| DpnII | GATC | 1 cut(s) | 279 |
| Eam1104I | CTCTTC | 1 cut(s) | 230 |
| EarI | CTCTTC | 1 cut(s) | 230 |
| Eco57I | CTGAAG | 1 cut(s) | 401 |
| Eco81I | CCTNAGG | 1 cut(s) | 165 |
| EcoT22I | ATGCAT | 1 cut(s) | 130 |
| FaeI | CATG | 4 cut(s) | 132, 200, 223, 352 |
| FaiI | YATR | 8 cut(s) | 83, 115, 130, 198, 221, 350, 407, 508 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 349, 381 |
| FatI | CATG | 4 cut(s) | 128, 196, 219, 348 |
| FokI | GGATG | 1 cut(s) | 455 |
| FspBI | CTAG | 2 cut(s) | 6, 48 |
| HaeIII | GGCC | 1 cut(s) | 175 |
| Hin1II | CATG | 4 cut(s) | 132, 200, 223, 352 |
| HindIII | AAGCTT | 1 cut(s) | 262 |
| HinfI | GANTC | 3 cut(s) | 155, 189, 466 |
| HphI | GGTGA | 1 cut(s) | 493 |
| Hpy188I | TCNGA | 2 cut(s) | 272, 393 |
| Hpy188III | TCNNGA | 1 cut(s) | 203 |
| HpyAV | CCTTC | 3 cut(s) | 71, 186, 472 |
| HpyCH4V | TGCA | 2 cut(s) | 128, 506 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 53, 340 |
| HpyF3I | CTNAG | 3 cut(s) | 165, 269, 378 |
| Hsp92II | CATG | 4 cut(s) | 132, 200, 223, 352 |
| Kzo9I | GATC | 1 cut(s) | 279 |
| LguI | GCTCTTC | 1 cut(s) | 230 |
| LpnPI | CCDG | 4 cut(s) | 177, 410, 425, 446 |
| LweI | GCATC | 2 cut(s) | 115, 397 |
| MaeI | CTAG | 2 cut(s) | 6, 48 |
| MalI | GATC | 1 cut(s) | 281 |
| MboI | GATC | 1 cut(s) | 279 |
| MboII | GAAGA | 4 cut(s) | 100, 247, 316, 407 |
| MfeI | CAATTG | 1 cut(s) | 299 |
| MluCI | AATT | 5 cut(s) | 40, 101, 120, 299, 308 |
| MlyI | GAGTC | 1 cut(s) | 198 |
| MnlI | CCTC | 3 cut(s) | 160, 333, 387 |
| Mph1103I | ATGCAT | 1 cut(s) | 130 |
| MroXI | GAANNNNTTC | 1 cut(s) | 264 |
| MunI | CAATTG | 1 cut(s) | 299 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 53, 340 |
| NdeII | GATC | 1 cut(s) | 279 |
| NlaIII | CATG | 4 cut(s) | 132, 200, 223, 352 |
| NsiI | ATGCAT | 1 cut(s) | 130 |
| NspI | RCATGY | 3 cut(s) | 132, 200, 223 |
| PciI | ACATGT | 2 cut(s) | 196, 219 |
| PciSI | GCTCTTC | 1 cut(s) | 230 |
| PdmI | GAANNNNTTC | 1 cut(s) | 264 |
| PfeI | GAWTC | 2 cut(s) | 155, 466 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 439 |
| PleI | GAGTC | 1 cut(s) | 197 |
| PpsI | GAGTC | 1 cut(s) | 197 |
| PscI | ACATGT | 2 cut(s) | 196, 219 |
| PstNI | CAGNNNCTG | 2 cut(s) | 391, 439 |
| SapI | GCTCTTC | 1 cut(s) | 230 |
| Sau3AI | GATC | 1 cut(s) | 279 |
| SchI | GAGTC | 1 cut(s) | 198 |
| SetI | ASST | 7 cut(s) | 28, 82, 166, 171, 266, 399, 483 |
| SfaNI | GCATC | 2 cut(s) | 115, 397 |
| Sse9I | AATT | 5 cut(s) | 40, 101, 120, 299, 308 |
| SspMI | CTAG | 2 cut(s) | 6, 48 |
| TasI | AATT | 5 cut(s) | 40, 101, 120, 299, 308 |
| TfiI | GAWTC | 2 cut(s) | 155, 466 |
| TspDTI | ATGAA | 1 cut(s) | 101 |
| TspGWI | ACGGA | 1 cut(s) | 171 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 439 |
| XceI | RCATGY | 3 cut(s) | 132, 200, 223 |
| XmnI | GAANNNNTTC | 1 cut(s) | 264 |
| XspI | CTAG | 2 cut(s) | 6, 48 |
| Zsp2I | ATGCAT | 1 cut(s) | 130 |