Agamous-like MADS-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SBF | PF01758 | 134 - 312 | 4.7e-33 | Sodium Bile acid symporter family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 176 |
| Acc36I | ACCTGC | 1 cut(s) | 769 |
| AccB1I | GGYRCC | 1 cut(s) | 556 |
| AciI | CCGC | 4 cut(s) | 205, 309, 591, 1091 |
| AclWI | GGATC | 1 cut(s) | 422 |
| AcoI | YGGCCR | 1 cut(s) | 1161 |
| AcsI | RAATTY | 3 cut(s) | 927, 1014, 1209 |
| AcyI | GRCGYC | 1 cut(s) | 173 |
| AfaI | GTAC | 2 cut(s) | 70, 883 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 185, 253, 407, 527, 1191 |
| AgsI | TTSAA | 1 cut(s) | 851 |
| AjnI | CCWGG | 1 cut(s) | 1086 |
| AluBI | AGCT | 5 cut(s) | 45, 99, 613, 675, 1080 |
| AluI | AGCT | 5 cut(s) | 45, 99, 613, 675, 1080 |
| Alw21I | GWGCWC | 1 cut(s) | 1207 |
| Alw26I | GTCTC | 6 cut(s) | 76, 82, 300, 950, 1100, 1209 |
| AlwI | GGATC | 1 cut(s) | 422 |
| AoxI | GGCC | 6 cut(s) | 651, 718, 805, 984, 1161, 1171 |
| ApeKI | GCWGC | 3 cut(s) | 202, 332, 347 |
| ApoI | RAATTY | 3 cut(s) | 927, 1014, 1209 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 429, 461, 822, 854 |
| AseI | ATTAAT | 1 cut(s) | 915 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1054 |
| AspLEI | GCGC | 1 cut(s) | 814 |
| AspS9I | GGNCC | 1 cut(s) | 1171 |
| AsuHPI | GGTGA | 4 cut(s) | 296, 580, 706, 832 |
| AsuII | TTCGAA | 1 cut(s) | 125 |
| BaeGI | GKGCMC | 2 cut(s) | 610, 1199 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 363, 396 |
| BalI | TGGCCA | 1 cut(s) | 1163 |
| BanI | GGYRCC | 1 cut(s) | 556 |
| Bbv12I | GWGCWC | 1 cut(s) | 1207 |
| BbvI | GCAGC | 3 cut(s) | 214, 319, 334 |
| BccI | CCATC | 3 cut(s) | 851, 935, 1172 |
| BceAI | ACGGC | 3 cut(s) | 163, 270, 1115 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 437, 471, 737, 771 |
| BciT130I | CCWGG | 1 cut(s) | 1088 |
| BciVI | GTATCC | 4 cut(s) | 391, 671, 992, 1018 |
| BcoDI | GTCTC | 6 cut(s) | 76, 82, 300, 950, 1100, 1209 |
| BfaI | CTAG | 5 cut(s) | 527, 561, 618, 627, 672 |
| BfuAI | ACCTGC | 1 cut(s) | 769 |
| BfuI | GTATCC | 4 cut(s) | 391, 671, 992, 1018 |
| BisI | GCNGC | 3 cut(s) | 203, 333, 348 |
| BlpI | GCTNAGC | 1 cut(s) | 357 |
| BlsI | GCNGC | 3 cut(s) | 204, 334, 349 |
| Bme1390I | CCNGG | 1 cut(s) | 1088 |
| BmgT120I | GGNCC | 1 cut(s) | 1171 |
| BmiI | GGNNCC | 2 cut(s) | 271, 558 |
| BmrFI | CCNGG | 1 cut(s) | 1088 |
| BmrI | ACTGGG | 1 cut(s) | 1012 |
| BmsI | GCATC | 2 cut(s) | 739, 849 |
| BmuI | ACTGGG | 1 cut(s) | 1012 |
| BpmI | CTGGAG | 1 cut(s) | 1122 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 357 |
| Bpu14I | TTCGAA | 1 cut(s) | 125 |
| BpuEI | CTTGAG | 2 cut(s) | 655, 676 |
| BsaHI | GRCGYC | 1 cut(s) | 173 |
| BsaI | GGTCTC | 3 cut(s) | 950, 1100, 1209 |
| BsaJI | CCNNGG | 6 cut(s) | 384, 690, 759, 1086, 1114, 1158 |
| BsaWI | WCCGGW | 1 cut(s) | 742 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 185, 253, 407, 527, 1191 |
| Bse118I | RCCGGY | 1 cut(s) | 520 |
| Bse1I | ACTGG | 6 cut(s) | 794, 833, 854, 1007, 1108, 1245 |
| Bse3DI | GCAATG | 2 cut(s) | 318, 549 |
| BseBI | CCWGG | 1 cut(s) | 1088 |
| BseDI | CCNNGG | 6 cut(s) | 384, 690, 759, 1086, 1114, 1158 |
| BseGI | GGATG | 2 cut(s) | 843, 946 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 185, 253, 407, 527, 1191 |
| BseMI | GCAATG | 2 cut(s) | 318, 549 |
| BseMII | CTCAG | 3 cut(s) | 77, 311, 371 |
| BseNI | ACTGG | 6 cut(s) | 794, 833, 854, 1007, 1108, 1245 |
| BseRI | GAGGAG | 1 cut(s) | 656 |
| BseSI | GKGCMC | 2 cut(s) | 610, 1199 |
| BseXI | GCAGC | 3 cut(s) | 214, 319, 334 |
| BseYI | CCCAGC | 1 cut(s) | 575 |
| Bsh1285I | CGRYCG | 2 cut(s) | 447, 747 |
| BshFI | GGCC | 6 cut(s) | 653, 720, 807, 986, 1163, 1173 |
| BshNI | GGYRCC | 1 cut(s) | 556 |
| BsiEI | CGRYCG | 2 cut(s) | 447, 747 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1207 |
| BsiSI | CCGG | 2 cut(s) | 521, 743 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 185, 253, 407, 527, 1191 |
| BsmAI | GTCTC | 6 cut(s) | 76, 82, 300, 950, 1100, 1209 |
| BsmBI | CGTCTC | 1 cut(s) | 300 |
| BsmI | GAATGC | 1 cut(s) | 1077 |
| BsnI | GGCC | 6 cut(s) | 653, 720, 807, 986, 1163, 1173 |
| Bso31I | GGTCTC | 3 cut(s) | 950, 1100, 1209 |
| Bsp119I | TTCGAA | 1 cut(s) | 125 |
| Bsp1286I | GDGCHC | 3 cut(s) | 610, 1199, 1207 |
| Bsp143I | GATC | 3 cut(s) | 414, 696, 876 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 357 |
| Bsp19I | CCATGG | 2 cut(s) | 759, 1158 |
| BspACI | CCGC | 4 cut(s) | 205, 309, 591, 1091 |
| BspANI | GGCC | 6 cut(s) | 653, 720, 807, 986, 1163, 1173 |
| BspCNI | CTCAG | 3 cut(s) | 78, 310, 370 |
| BspLI | GGNNCC | 2 cut(s) | 271, 558 |
| BspMI | ACCTGC | 1 cut(s) | 769 |
| BspPI | GGATC | 1 cut(s) | 422 |
| BspQI | GCTCTTC | 1 cut(s) | 106 |
| BspT104I | TTCGAA | 1 cut(s) | 125 |
| BspT107I | GGYRCC | 1 cut(s) | 556 |
| BspTNI | GGTCTC | 3 cut(s) | 950, 1100, 1209 |
| BsrDI | GCAATG | 2 cut(s) | 318, 549 |
| BsrFI | RCCGGY | 1 cut(s) | 520 |
| BsrI | ACTGG | 6 cut(s) | 794, 833, 854, 1007, 1108, 1245 |
| BssAI | RCCGGY | 1 cut(s) | 520 |
| BssECI | CCNNGG | 6 cut(s) | 384, 690, 759, 1086, 1114, 1158 |
| BssMI | GATC | 3 cut(s) | 414, 696, 876 |
| BssNI | GRCGYC | 1 cut(s) | 173 |
| BssT1I | CCWWGG | 4 cut(s) | 384, 759, 1114, 1158 |
| Bst2UI | CCWGG | 1 cut(s) | 1088 |
| Bst4CI | ACNGT | 2 cut(s) | 507, 994 |
| Bst6I | CTCTTC | 4 cut(s) | 106, 122, 184, 226 |
| BstACI | GRCGYC | 1 cut(s) | 173 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 977 |
| BstBI | TTCGAA | 1 cut(s) | 125 |
| BstC8I | GCNNGC | 2 cut(s) | 363, 1105 |
| BstDEI | CTNAG | 3 cut(s) | 86, 297, 357 |
| BstDSI | CCRYGG | 2 cut(s) | 759, 1158 |
| BstF5I | GGATG | 2 cut(s) | 843, 946 |
| BstHHI | GCGC | 1 cut(s) | 814 |
| BstKTI | GATC | 3 cut(s) | 417, 699, 879 |
| BstMAI | GTCTC | 6 cut(s) | 76, 82, 300, 950, 1100, 1209 |
| BstMBI | GATC | 3 cut(s) | 414, 696, 876 |
| BstMCI | CGRYCG | 2 cut(s) | 447, 747 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 338, 347, 353, 362, 599, 977 |
| BstNI | CCWGG | 1 cut(s) | 1088 |
| BstNSI | RCATGY | 2 cut(s) | 75, 1146 |
| BstSCI | CCNGG | 1 cut(s) | 1086 |
| BstSLI | GKGCMC | 2 cut(s) | 610, 1199 |
| BstV1I | GCAGC | 3 cut(s) | 214, 319, 334 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1115 |
| BsuI | GTATCC | 4 cut(s) | 391, 671, 992, 1018 |
| BsuRI | GGCC | 6 cut(s) | 653, 720, 807, 986, 1163, 1173 |
| BtgI | CCRYGG | 2 cut(s) | 759, 1158 |
| BtsCI | GGATG | 2 cut(s) | 843, 946 |
| BtsI | GCAGTG | 2 cut(s) | 336, 987 |
| BtsIMutI | CAGTG | 3 cut(s) | 336, 861, 987 |
| BveI | ACCTGC | 1 cut(s) | 769 |
| Cac8I | GCNNGC | 2 cut(s) | 363, 1105 |
| CfoI | GCGC | 1 cut(s) | 814 |
| Cfr10I | RCCGGY | 1 cut(s) | 520 |
| Cfr13I | GGNCC | 1 cut(s) | 1171 |
| Csp6I | GTAC | 2 cut(s) | 69, 882 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 325, 360, 667, 702 |
| CviAII | CATG | 8 cut(s) | 72, 418, 760, 977, 1143, 1159, 1168, 1255 |
| CviQI | GTAC | 2 cut(s) | 69, 882 |
| DdeI | CTNAG | 3 cut(s) | 86, 297, 357 |
| DpnI | GATC | 3 cut(s) | 416, 698, 878 |
| DpnII | GATC | 3 cut(s) | 414, 696, 876 |
| EaeI | YGGCCR | 1 cut(s) | 1161 |
| Eam1104I | CTCTTC | 4 cut(s) | 106, 122, 184, 226 |
| EarI | CTCTTC | 4 cut(s) | 106, 122, 184, 226 |
| Eco130I | CCWWGG | 4 cut(s) | 384, 759, 1114, 1158 |
| Eco147I | AGGCCT | 1 cut(s) | 720 |
| Eco31I | GGTCTC | 3 cut(s) | 950, 1100, 1209 |
| EcoRI | GAATTC | 1 cut(s) | 1209 |
| EcoRII | CCWGG | 1 cut(s) | 1086 |
| EcoT14I | CCWWGG | 4 cut(s) | 384, 759, 1114, 1158 |
| ErhI | CCWWGG | 4 cut(s) | 384, 759, 1114, 1158 |
| Esp3I | CGTCTC | 1 cut(s) | 300 |
| FaeI | CATG | 8 cut(s) | 75, 421, 763, 980, 1146, 1162, 1171, 1258 |
| FatI | CATG | 8 cut(s) | 71, 417, 759, 976, 1142, 1158, 1167, 1254 |
| FauI | CCCGC | 1 cut(s) | 1084 |
| Fnu4HI | GCNGC | 3 cut(s) | 203, 333, 348 |
| FokI | GGATG | 2 cut(s) | 830, 953 |
| Fsp4HI | GCNGC | 3 cut(s) | 203, 333, 348 |
| FspBI | CTAG | 5 cut(s) | 527, 561, 618, 627, 672 |
| GlaI | GCGC | 1 cut(s) | 813 |
| GluI | GCNGC | 3 cut(s) | 203, 333, 348 |
| GsaI | CCCAGC | 1 cut(s) | 579 |
| GsuI | CTGGAG | 1 cut(s) | 1122 |
| HaeIII | GGCC | 6 cut(s) | 653, 720, 807, 986, 1163, 1173 |
| HapII | CCGG | 2 cut(s) | 521, 743 |
| HhaI | GCGC | 1 cut(s) | 814 |
| Hin1I | GRCGYC | 1 cut(s) | 173 |
| Hin1II | CATG | 8 cut(s) | 75, 421, 763, 980, 1146, 1162, 1171, 1258 |
| Hin6I | GCGC | 1 cut(s) | 812 |
| HinP1I | GCGC | 1 cut(s) | 812 |
| HinfI | GANTC | 2 cut(s) | 290, 432 |
| HpaII | CCGG | 2 cut(s) | 521, 743 |
| HphI | GGTGA | 4 cut(s) | 296, 580, 706, 832 |
| Hpy166II | GTNNAC | 2 cut(s) | 6, 372 |
| Hpy188I | TCNGA | 2 cut(s) | 140, 950 |
| Hpy188III | TCNNGA | 2 cut(s) | 634, 1214 |
| Hpy8I | GTNNAC | 2 cut(s) | 6, 372 |
| Hpy99I | CGWCG | 2 cut(s) | 175, 178 |
| HpyAV | CCTTC | 4 cut(s) | 31, 206, 857, 1252 |
| HpyCH4III | ACNGT | 2 cut(s) | 507, 994 |
| HpyCH4IV | ACGT | 2 cut(s) | 173, 368 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 338, 347, 353, 362, 599, 977 |
| HpyF3I | CTNAG | 3 cut(s) | 86, 297, 357 |
| HpySE526I | ACGT | 2 cut(s) | 173, 368 |
| Hsp92I | GRCGYC | 1 cut(s) | 173 |
| Hsp92II | CATG | 8 cut(s) | 75, 421, 763, 980, 1146, 1162, 1171, 1258 |
| HspAI | GCGC | 1 cut(s) | 812 |
| Kzo9I | GATC | 3 cut(s) | 414, 696, 876 |
| LguI | GCTCTTC | 1 cut(s) | 106 |
| LmnI | GCTCC | 4 cut(s) | 269, 680, 1085, 1119 |
| Lsp1109I | GCAGC | 3 cut(s) | 214, 319, 334 |
| LweI | GCATC | 2 cut(s) | 739, 849 |
| MaeI | CTAG | 5 cut(s) | 527, 561, 618, 627, 672 |
| MaeII | ACGT | 2 cut(s) | 173, 368 |
| MaeIII | GTNAC | 3 cut(s) | 700, 796, 838 |
| MalI | GATC | 3 cut(s) | 416, 698, 878 |
| MboI | GATC | 3 cut(s) | 414, 696, 876 |
| MboII | GAAGA | 8 cut(s) | 3, 93, 139, 201, 213, 1046, 1049, 1215 |
| MfeI | CAATTG | 1 cut(s) | 684 |
| MhlI | GDGCHC | 3 cut(s) | 610, 1199, 1207 |
| MlsI | TGGCCA | 1 cut(s) | 1163 |
| MluCI | AATT | 7 cut(s) | 537, 684, 726, 912, 927, 1014, 1209 |
| MluNI | TGGCCA | 1 cut(s) | 1163 |
| MlyI | GAGTC | 1 cut(s) | 284 |
| MmeI | TCCRAC | 1 cut(s) | 976 |
| Mox20I | TGGCCA | 1 cut(s) | 1163 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1054 |
| MscI | TGGCCA | 1 cut(s) | 1163 |
| MseI | TTAA | 3 cut(s) | 536, 725, 915 |
| MslI | CAYNNNNRTG | 2 cut(s) | 109, 1070 |
| Msp20I | TGGCCA | 1 cut(s) | 1163 |
| MspA1I | CMGCKG | 2 cut(s) | 205, 613 |
| MspI | CCGG | 2 cut(s) | 521, 743 |
| MspR9I | CCNGG | 1 cut(s) | 1088 |
| MunI | CAATTG | 1 cut(s) | 684 |
| Mva1269I | GAATGC | 1 cut(s) | 1077 |
| MvaI | CCWGG | 1 cut(s) | 1088 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 338, 347, 353, 362, 599, 977 |
| NcoI | CCATGG | 2 cut(s) | 759, 1158 |
| NdeII | GATC | 3 cut(s) | 414, 696, 876 |
| NlaIII | CATG | 8 cut(s) | 75, 421, 763, 980, 1146, 1162, 1171, 1258 |
| NlaIV | GGNNCC | 2 cut(s) | 271, 558 |
| NmuCI | GTSAC | 2 cut(s) | 796, 838 |
| NspI | RCATGY | 2 cut(s) | 75, 1146 |
| NspV | TTCGAA | 1 cut(s) | 125 |
| PceI | AGGCCT | 1 cut(s) | 720 |
| PciSI | GCTCTTC | 1 cut(s) | 106 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 116, 176, 230 |
| PctI | GAATGC | 1 cut(s) | 1077 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1054 |
| PfeI | GAWTC | 1 cut(s) | 432 |
| PkrI | GCNGC | 3 cut(s) | 204, 334, 349 |
| PleI | GAGTC | 1 cut(s) | 284 |
| PpsI | GAGTC | 1 cut(s) | 284 |
| PshBI | ATTAAT | 1 cut(s) | 915 |
| Psp6I | CCWGG | 1 cut(s) | 1086 |
| PspFI | CCCAGC | 1 cut(s) | 575 |
| PspGI | CCWGG | 1 cut(s) | 1086 |
| PspN4I | GGNNCC | 2 cut(s) | 271, 558 |
| PspPI | GGNCC | 1 cut(s) | 1171 |
| PvuII | CAGCTG | 1 cut(s) | 613 |
| RsaI | GTAC | 2 cut(s) | 70, 883 |
| RsaNI | GTAC | 2 cut(s) | 69, 882 |
| RseI | CAYNNNNRTG | 2 cut(s) | 109, 1070 |
| SapI | GCTCTTC | 1 cut(s) | 106 |
| SaqAI | TTAA | 3 cut(s) | 536, 725, 915 |
| SatI | GCNGC | 3 cut(s) | 203, 333, 348 |
| Sau3AI | GATC | 3 cut(s) | 414, 696, 876 |
| Sau96I | GGNCC | 1 cut(s) | 1171 |
| SchI | GAGTC | 1 cut(s) | 284 |
| ScrFI | CCNGG | 1 cut(s) | 1088 |
| SduI | GDGCHC | 3 cut(s) | 610, 1199, 1207 |
| SfaNI | GCATC | 2 cut(s) | 739, 849 |
| SfuI | TTCGAA | 1 cut(s) | 125 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 109, 1070 |
| SmlI | CTYRAG | 2 cut(s) | 634, 655 |
| SmoI | CTYRAG | 2 cut(s) | 634, 655 |
| Sse9I | AATT | 7 cut(s) | 537, 684, 726, 912, 927, 1014, 1209 |
| SseBI | AGGCCT | 1 cut(s) | 720 |
| SsiI | CCGC | 4 cut(s) | 205, 309, 591, 1091 |
| SspI | AATATT | 2 cut(s) | 567, 774 |
| SspMI | CTAG | 5 cut(s) | 527, 561, 618, 627, 672 |
| StuI | AGGCCT | 1 cut(s) | 720 |
| StyD4I | CCNGG | 1 cut(s) | 1086 |
| StyI | CCWWGG | 4 cut(s) | 384, 759, 1114, 1158 |
| TaaI | ACNGT | 2 cut(s) | 507, 994 |
| TaiI | ACGT | 2 cut(s) | 176, 371 |
| TaqI | TCGA | 7 cut(s) | 125, 155, 170, 447, 747, 1207, 1213 |
| TaqII | GACCGA | 1 cut(s) | 433 |
| TasI | AATT | 7 cut(s) | 537, 684, 726, 912, 927, 1014, 1209 |
| TatI | WGTACW | 2 cut(s) | 68, 881 |
| TfiI | GAWTC | 1 cut(s) | 432 |
| Tru1I | TTAA | 3 cut(s) | 536, 725, 915 |
| Tru9I | TTAA | 3 cut(s) | 536, 725, 915 |
| TscAI | CASTG | 3 cut(s) | 343, 861, 987 |
| TseFI | GTSAC | 2 cut(s) | 796, 838 |
| TseI | GCWGC | 3 cut(s) | 202, 332, 347 |
| Tsp45I | GTSAC | 2 cut(s) | 796, 838 |
| TspDTI | ATGAA | 5 cut(s) | 13, 93, 876, 965, 1047 |
| TspRI | CASTG | 3 cut(s) | 343, 861, 987 |
| VspI | ATTAAT | 1 cut(s) | 915 |
| XapI | RAATTY | 3 cut(s) | 927, 1014, 1209 |
| XceI | RCATGY | 2 cut(s) | 75, 1146 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1165 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1054 |
| XspI | CTAG | 5 cut(s) | 527, 561, 618, 627, 672 |
| ZraI | GACGTC | 1 cut(s) | 174 |