Agamous-like MADS-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PH_PRMT_N | PF25350 | 99 - 125 | 6.2e-06 | Protein arginine methyltransferase N-terminal PH domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 121 |
| Acc36I | ACCTGC | 1 cut(s) | 121 |
| Acc65I | GGTACC | 1 cut(s) | 1406 |
| AccB1I | GGYRCC | 1 cut(s) | 1406 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1331 |
| AciI | CCGC | 3 cut(s) | 100, 914, 1572 |
| AcuI | CTGAAG | 2 cut(s) | 360, 1076 |
| AfaI | GTAC | 3 cut(s) | 571, 1266, 1408 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 46, 84, 1190, 1331, 1661, 1832 |
| AflII | CTTAAG | 1 cut(s) | 292 |
| AflIII | ACRYGT | 1 cut(s) | 947 |
| AgsI | TTSAA | 9 cut(s) | 307, 527, 848, 1181, 1376, 1444, 1633, 1791, 1966 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 690 |
| AjnI | CCWGG | 1 cut(s) | 688 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 213, 245 |
| Alw21I | GWGCWC | 1 cut(s) | 1595 |
| Alw26I | GTCTC | 5 cut(s) | 450, 677, 771, 1107, 1472 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 741, 1079 |
| AoxI | GGCC | 1 cut(s) | 313 |
| ApeKI | GCWGC | 4 cut(s) | 270, 670, 985, 1969 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 726 |
| Asp718I | GGTACC | 1 cut(s) | 1406 |
| AspLEI | GCGC | 1 cut(s) | 1929 |
| AspS9I | GGNCC | 4 cut(s) | 314, 692, 1007, 1606 |
| AsuC2I | CCSGG | 2 cut(s) | 48, 1005 |
| AsuHPI | GGTGA | 5 cut(s) | 102, 375, 614, 914, 1439 |
| AsuII | TTCGAA | 1 cut(s) | 11 |
| AvaII | GGWCC | 3 cut(s) | 692, 1007, 1606 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1390, 1423 |
| BanI | GGYRCC | 1 cut(s) | 1406 |
| BanII | GRGCYC | 1 cut(s) | 1595 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1608, 1640 |
| Bbv12I | GWGCWC | 1 cut(s) | 1595 |
| BbvCI | CCTCAGC | 1 cut(s) | 1932 |
| BbvI | GCAGC | 4 cut(s) | 282, 682, 997, 1981 |
| BccI | CCATC | 8 cut(s) | 77, 170, 506, 827, 1115, 1513, 1532, 1727 |
| BciT130I | CCWGG | 1 cut(s) | 690 |
| BciVI | GTATCC | 3 cut(s) | 451, 772, 1105 |
| BclI | TGATCA | 1 cut(s) | 1908 |
| BcnI | CCSGG | 2 cut(s) | 48, 1005 |
| BcoDI | GTCTC | 5 cut(s) | 450, 677, 771, 1107, 1472 |
| BfoI | RGCGCY | 1 cut(s) | 1930 |
| BfrI | CTTAAG | 1 cut(s) | 292 |
| BfuAI | ACCTGC | 1 cut(s) | 121 |
| BfuI | GTATCC | 3 cut(s) | 451, 772, 1105 |
| BisI | GCNGC | 4 cut(s) | 271, 671, 986, 1970 |
| BlsI | GCNGC | 4 cut(s) | 272, 672, 987, 1971 |
| Bme1390I | CCNGG | 3 cut(s) | 48, 690, 1005 |
| Bme18I | GGWCC | 3 cut(s) | 692, 1007, 1606 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 690 |
| BmgT120I | GGNCC | 4 cut(s) | 314, 692, 1007, 1606 |
| BmiI | GGNNCC | 5 cut(s) | 1002, 1008, 1408, 1492, 1576 |
| BmrFI | CCNGG | 3 cut(s) | 48, 690, 1005 |
| BmrI | ACTGGG | 2 cut(s) | 1179, 1923 |
| BmsI | GCATC | 1 cut(s) | 1676 |
| BmuI | ACTGGG | 2 cut(s) | 1179, 1923 |
| BpmI | CTGGAG | 2 cut(s) | 672, 1353 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1932 |
| Bpu14I | TTCGAA | 1 cut(s) | 11 |
| BpuEI | CTTGAG | 5 cut(s) | 76, 412, 733, 1071, 2000 |
| BpuMI | CCSGG | 2 cut(s) | 48, 1005 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1344 |
| BsaJI | CCNNGG | 3 cut(s) | 774, 1402, 1486 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 213, 243, 696, 726, 789, 819, 1656, 1686 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 46, 84, 1190, 1331, 1661, 1832 |
| Bse118I | RCCGGY | 1 cut(s) | 152 |
| Bse1I | ACTGG | 9 cut(s) | 358, 425, 746, 1084, 1185, 1336, 1410, 1655, 1918 |
| Bse3DI | GCAATG | 3 cut(s) | 123, 145, 1991 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1344 |
| BseBI | CCWGG | 1 cut(s) | 690 |
| BseDI | CCNNGG | 3 cut(s) | 774, 1402, 1486 |
| BseGI | GGATG | 6 cut(s) | 69, 517, 838, 1171, 1714, 1849 |
| BseJI | GATNNNNATC | 1 cut(s) | 1344 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 46, 84, 1190, 1331, 1661, 1832 |
| BseMI | GCAATG | 3 cut(s) | 123, 145, 1991 |
| BseMII | CTCAG | 2 cut(s) | 1608, 1946 |
| BseNI | ACTGG | 9 cut(s) | 358, 425, 746, 1084, 1185, 1336, 1410, 1655, 1918 |
| BseRI | GAGGAG | 1 cut(s) | 195 |
| BseXI | GCAGC | 4 cut(s) | 282, 682, 997, 1981 |
| BsgI | GTGCAG | 1 cut(s) | 1549 |
| BshFI | GGCC | 1 cut(s) | 315 |
| BshNI | GGYRCC | 1 cut(s) | 1406 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1595 |
| BsiSI | CCGG | 5 cut(s) | 47, 78, 153, 1004, 1898 |
| BslFI | GGGAC | 1 cut(s) | 376 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 46, 84, 1190, 1331, 1661, 1832 |
| BsmAI | GTCTC | 5 cut(s) | 450, 677, 771, 1107, 1472 |
| BsmFI | GGGAC | 1 cut(s) | 376 |
| BsmI | GAATGC | 1 cut(s) | 7 |
| BsnI | GGCC | 1 cut(s) | 315 |
| Bsp119I | TTCGAA | 1 cut(s) | 11 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1595 |
| Bsp143I | GATC | 3 cut(s) | 159, 1471, 1908 |
| Bsp19I | CCATGG | 2 cut(s) | 1402, 1486 |
| BspACI | CCGC | 3 cut(s) | 100, 914, 1572 |
| BspANI | GGCC | 1 cut(s) | 315 |
| BspCNI | CTCAG | 2 cut(s) | 1607, 1945 |
| BspLI | GGNNCC | 5 cut(s) | 1002, 1008, 1408, 1492, 1576 |
| BspMI | ACCTGC | 1 cut(s) | 121 |
| BspQI | GCTCTTC | 2 cut(s) | 280, 1052 |
| BspT104I | TTCGAA | 1 cut(s) | 11 |
| BspT107I | GGYRCC | 1 cut(s) | 1406 |
| BspTI | CTTAAG | 1 cut(s) | 292 |
| BsrDI | GCAATG | 3 cut(s) | 123, 145, 1991 |
| BsrFI | RCCGGY | 1 cut(s) | 152 |
| BsrI | ACTGG | 9 cut(s) | 358, 425, 746, 1084, 1185, 1336, 1410, 1655, 1918 |
| BssAI | RCCGGY | 1 cut(s) | 152 |
| BssECI | CCNNGG | 3 cut(s) | 774, 1402, 1486 |
| BssMI | GATC | 3 cut(s) | 159, 1471, 1908 |
| BssT1I | CCWWGG | 3 cut(s) | 774, 1402, 1486 |
| Bst2UI | CCWGG | 1 cut(s) | 690 |
| Bst4CI | ACNGT | 7 cut(s) | 615, 893, 930, 1269, 1393, 1606, 1822 |
| BstAFI | CTTAAG | 1 cut(s) | 292 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 941 |
| BstBI | TTCGAA | 1 cut(s) | 11 |
| BstC8I | GCNNGC | 5 cut(s) | 627, 663, 942, 1466, 1834 |
| BstDEI | CTNAG | 3 cut(s) | 657, 1594, 1932 |
| BstDSI | CCRYGG | 2 cut(s) | 1402, 1486 |
| BstF5I | GGATG | 6 cut(s) | 69, 517, 838, 1171, 1714, 1849 |
| BstH2I | RGCGCY | 1 cut(s) | 1930 |
| BstHHI | GCGC | 1 cut(s) | 1929 |
| BstKTI | GATC | 3 cut(s) | 162, 1474, 1911 |
| BstMAI | GTCTC | 5 cut(s) | 450, 677, 771, 1107, 1472 |
| BstMBI | GATC | 3 cut(s) | 159, 1471, 1908 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 13, 667, 941, 982, 1933, 1942 |
| BstNI | CCWGG | 1 cut(s) | 690 |
| BstNSI | RCATGY | 1 cut(s) | 951 |
| BstSCI | CCNGG | 3 cut(s) | 46, 688, 1003 |
| BstV1I | GCAGC | 4 cut(s) | 282, 682, 997, 1981 |
| BsuI | GTATCC | 3 cut(s) | 451, 772, 1105 |
| BsuRI | GGCC | 1 cut(s) | 315 |
| BtgI | CCRYGG | 2 cut(s) | 1402, 1486 |
| BtsCI | GGATG | 6 cut(s) | 69, 517, 838, 1171, 1714, 1849 |
| BtsI | GCAGTG | 1 cut(s) | 586 |
| BtsIMutI | CAGTG | 4 cut(s) | 586, 1329, 1398, 1911 |
| BveI | ACCTGC | 1 cut(s) | 121 |
| Cac8I | GCNNGC | 5 cut(s) | 627, 663, 942, 1466, 1834 |
| CaiI | CAGNNNCTG | 2 cut(s) | 741, 1079 |
| CfoI | GCGC | 1 cut(s) | 1929 |
| Cfr10I | RCCGGY | 1 cut(s) | 152 |
| Cfr13I | GGNCC | 4 cut(s) | 314, 692, 1007, 1606 |
| Csp6I | GTAC | 3 cut(s) | 570, 1265, 1407 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1539, 1574 |
| CviAII | CATG | 8 cut(s) | 189, 948, 977, 1403, 1424, 1487, 1610, 1688 |
| CviQI | GTAC | 3 cut(s) | 570, 1265, 1407 |
| DdeI | CTNAG | 3 cut(s) | 657, 1594, 1932 |
| DpnI | GATC | 3 cut(s) | 161, 1473, 1910 |
| DpnII | GATC | 3 cut(s) | 159, 1471, 1908 |
| DriI | GACNNNNNGTC | 1 cut(s) | 690 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 690 |
| Ecl136II | GAGCTC | 1 cut(s) | 1593 |
| Eco130I | CCWWGG | 3 cut(s) | 774, 1402, 1486 |
| Eco24I | GRGCYC | 1 cut(s) | 1595 |
| Eco47I | GGWCC | 3 cut(s) | 692, 1007, 1606 |
| Eco53kI | GAGCTC | 1 cut(s) | 1593 |
| Eco57I | CTGAAG | 2 cut(s) | 360, 1076 |
| EcoICRI | GAGCTC | 1 cut(s) | 1593 |
| EcoO109I | RGGNCCY | 3 cut(s) | 314, 692, 1007 |
| EcoRI | GAATTC | 2 cut(s) | 121, 364 |
| EcoRII | CCWGG | 1 cut(s) | 688 |
| EcoT14I | CCWWGG | 3 cut(s) | 774, 1402, 1486 |
| EcoT38I | GRGCYC | 1 cut(s) | 1595 |
| ErhI | CCWWGG | 3 cut(s) | 774, 1402, 1486 |
| FaeI | CATG | 8 cut(s) | 192, 951, 980, 1406, 1427, 1490, 1613, 1691 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1849, 1881, 1945, 1977 |
| FaqI | GGGAC | 1 cut(s) | 376 |
| FatI | CATG | 8 cut(s) | 188, 947, 976, 1402, 1423, 1486, 1609, 1687 |
| FauI | CCCGC | 1 cut(s) | 907 |
| FbaI | TGATCA | 1 cut(s) | 1908 |
| Fnu4HI | GCNGC | 4 cut(s) | 271, 671, 986, 1970 |
| FokI | GGATG | 6 cut(s) | 56, 524, 845, 1178, 1721, 1856 |
| FriOI | GRGCYC | 1 cut(s) | 1595 |
| Fsp4HI | GCNGC | 4 cut(s) | 271, 671, 986, 1970 |
| GlaI | GCGC | 1 cut(s) | 1928 |
| GluI | GCNGC | 4 cut(s) | 271, 671, 986, 1970 |
| GsuI | CTGGAG | 2 cut(s) | 672, 1353 |
| HaeII | RGCGCY | 1 cut(s) | 1930 |
| HaeIII | GGCC | 1 cut(s) | 315 |
| HapII | CCGG | 5 cut(s) | 47, 78, 153, 1004, 1898 |
| HhaI | GCGC | 1 cut(s) | 1929 |
| Hin1II | CATG | 8 cut(s) | 192, 951, 980, 1406, 1427, 1490, 1613, 1691 |
| Hin6I | GCGC | 1 cut(s) | 1927 |
| HinP1I | GCGC | 1 cut(s) | 1927 |
| HincII | GTYRAC | 1 cut(s) | 1321 |
| HindII | GTYRAC | 1 cut(s) | 1321 |
| HindIII | AAGCTT | 1 cut(s) | 1438 |
| HpaII | CCGG | 5 cut(s) | 47, 78, 153, 1004, 1898 |
| HphI | GGTGA | 5 cut(s) | 102, 375, 614, 914, 1439 |
| Hpy166II | GTNNAC | 2 cut(s) | 1321, 1625 |
| Hpy188III | TCNNGA | 5 cut(s) | 618, 698, 1054, 1373, 1475 |
| Hpy8I | GTNNAC | 2 cut(s) | 1321, 1625 |
| HpyCH4III | ACNGT | 7 cut(s) | 615, 893, 930, 1269, 1393, 1606, 1822 |
| HpyCH4IV | ACGT | 1 cut(s) | 1939 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 13, 667, 941, 982, 1933, 1942 |
| HpyF3I | CTNAG | 3 cut(s) | 657, 1594, 1932 |
| HpySE526I | ACGT | 1 cut(s) | 1939 |
| Hsp92II | CATG | 8 cut(s) | 192, 951, 980, 1406, 1427, 1490, 1613, 1691 |
| HspAI | GCGC | 1 cut(s) | 1927 |
| KpnI | GGTACC | 1 cut(s) | 1410 |
| Ksp22I | TGATCA | 1 cut(s) | 1908 |
| Kzo9I | GATC | 3 cut(s) | 159, 1471, 1908 |
| LguI | GCTCTTC | 2 cut(s) | 280, 1052 |
| LmnI | GCTCC | 3 cut(s) | 4, 717, 1664 |
| Lsp1109I | GCAGC | 4 cut(s) | 282, 682, 997, 1981 |
| LweI | GCATC | 1 cut(s) | 1676 |
| MaeII | ACGT | 1 cut(s) | 1939 |
| MaeIII | GTNAC | 6 cut(s) | 381, 635, 950, 967, 1047, 1187 |
| MalI | GATC | 3 cut(s) | 161, 1473, 1910 |
| MboI | GATC | 3 cut(s) | 159, 1471, 1908 |
| MfeI | CAATTG | 1 cut(s) | 82 |
| MhlI | GDGCHC | 1 cut(s) | 1595 |
| MlyI | GAGTC | 7 cut(s) | 231, 332, 389, 452, 679, 773, 1109 |
| MmeI | TCCRAC | 3 cut(s) | 199, 1108, 1337 |
| MroXI | GAANNNNTTC | 1 cut(s) | 726 |
| MseI | TTAA | 6 cut(s) | 293, 1500, 1649, 1659, 1854, 1952 |
| MspA1I | CMGCKG | 1 cut(s) | 1118 |
| MspCI | CTTAAG | 1 cut(s) | 292 |
| MspI | CCGG | 5 cut(s) | 47, 78, 153, 1004, 1898 |
| MspR9I | CCNGG | 3 cut(s) | 48, 690, 1005 |
| MunI | CAATTG | 1 cut(s) | 82 |
| Mva1269I | GAATGC | 1 cut(s) | 7 |
| MvaI | CCWGG | 1 cut(s) | 690 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 13, 667, 941, 982, 1933, 1942 |
| NciI | CCSGG | 2 cut(s) | 48, 1005 |
| NcoI | CCATGG | 2 cut(s) | 1402, 1486 |
| NdeII | GATC | 3 cut(s) | 159, 1471, 1908 |
| NlaIII | CATG | 8 cut(s) | 192, 951, 980, 1406, 1427, 1490, 1613, 1691 |
| NlaIV | GGNNCC | 5 cut(s) | 1002, 1008, 1408, 1492, 1576 |
| NmuCI | GTSAC | 3 cut(s) | 381, 635, 950 |
| NspI | RCATGY | 1 cut(s) | 951 |
| NspV | TTCGAA | 1 cut(s) | 11 |
| PaqCI | CACCTGC | 1 cut(s) | 121 |
| PciI | ACATGT | 1 cut(s) | 947 |
| PciSI | GCTCTTC | 2 cut(s) | 280, 1052 |
| PctI | GAATGC | 1 cut(s) | 7 |
| PdmI | GAANNNNTTC | 1 cut(s) | 726 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1331 |
| PkrI | GCNGC | 4 cut(s) | 272, 672, 987, 1971 |
| PleI | GAGTC | 7 cut(s) | 230, 331, 388, 451, 679, 772, 1108 |
| PpsI | GAGTC | 7 cut(s) | 230, 331, 388, 451, 679, 772, 1108 |
| PpuMI | RGGWCCY | 2 cut(s) | 692, 1007 |
| PscI | ACATGT | 1 cut(s) | 947 |
| Psp124BI | GAGCTC | 1 cut(s) | 1595 |
| Psp5II | RGGWCCY | 2 cut(s) | 692, 1007 |
| Psp6I | CCWGG | 1 cut(s) | 688 |
| PspGI | CCWGG | 1 cut(s) | 688 |
| PspN4I | GGNNCC | 5 cut(s) | 1002, 1008, 1408, 1492, 1576 |
| PspPI | GGNCC | 4 cut(s) | 314, 692, 1007, 1606 |
| PspPPI | RGGWCCY | 2 cut(s) | 692, 1007 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 984, 1016 |
| PstNI | CAGNNNCTG | 2 cut(s) | 741, 1079 |
| PvuII | CAGCTG | 1 cut(s) | 1118 |
| RsaI | GTAC | 3 cut(s) | 571, 1266, 1408 |
| RsaNI | GTAC | 3 cut(s) | 570, 1265, 1407 |
| SacI | GAGCTC | 1 cut(s) | 1595 |
| SapI | GCTCTTC | 2 cut(s) | 280, 1052 |
| SaqAI | TTAA | 6 cut(s) | 293, 1500, 1649, 1659, 1854, 1952 |
| SatI | GCNGC | 4 cut(s) | 271, 671, 986, 1970 |
| Sau3AI | GATC | 3 cut(s) | 159, 1471, 1908 |
| Sau96I | GGNCC | 4 cut(s) | 314, 692, 1007, 1606 |
| SchI | GAGTC | 7 cut(s) | 231, 332, 389, 452, 679, 773, 1109 |
| ScrFI | CCNGG | 3 cut(s) | 48, 690, 1005 |
| SduI | GDGCHC | 1 cut(s) | 1595 |
| SfaNI | GCATC | 1 cut(s) | 1676 |
| SfuI | TTCGAA | 1 cut(s) | 11 |
| SinI | GGWCC | 3 cut(s) | 692, 1007, 1606 |
| SmlI | CTYRAG | 6 cut(s) | 91, 292, 427, 748, 1086, 1979 |
| SmoI | CTYRAG | 6 cut(s) | 91, 292, 427, 748, 1086, 1979 |
| SsiI | CCGC | 3 cut(s) | 100, 914, 1572 |
| SstI | GAGCTC | 1 cut(s) | 1595 |
| StyD4I | CCNGG | 3 cut(s) | 46, 688, 1003 |
| StyI | CCWWGG | 3 cut(s) | 774, 1402, 1486 |
| TaaI | ACNGT | 7 cut(s) | 615, 893, 930, 1269, 1393, 1606, 1822 |
| TaiI | ACGT | 1 cut(s) | 1942 |
| TaqI | TCGA | 2 cut(s) | 11, 1508 |
| TatI | WGTACW | 1 cut(s) | 569 |
| Tru1I | TTAA | 6 cut(s) | 293, 1500, 1649, 1659, 1854, 1952 |
| Tru9I | TTAA | 6 cut(s) | 293, 1500, 1649, 1659, 1854, 1952 |
| TscAI | CASTG | 4 cut(s) | 586, 1336, 1398, 1918 |
| TseFI | GTSAC | 3 cut(s) | 381, 635, 950 |
| TseI | GCWGC | 4 cut(s) | 270, 670, 985, 1969 |
| Tsp45I | GTSAC | 3 cut(s) | 381, 635, 950 |
| TspGWI | ACGGA | 2 cut(s) | 316, 1206 |
| TspRI | CASTG | 4 cut(s) | 586, 1336, 1398, 1918 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1331 |
| Vha464I | CTTAAG | 1 cut(s) | 292 |
| VpaK11BI | GGWCC | 3 cut(s) | 692, 1007, 1606 |
| XceI | RCATGY | 1 cut(s) | 951 |
| XmnI | GAANNNNTTC | 1 cut(s) | 726 |