Agamous-like MADS-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SRF-TF | PF00319 | 10 - 50 | 9.6e-15 | SRF-type transcription factor (DNA-binding and dimerisation domain) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 199 |
| AccII | CGCG | 1 cut(s) | 131 |
| AciI | CCGC | 1 cut(s) | 129 |
| AcsI | RAATTY | 1 cut(s) | 209 |
| AcuI | CTGAAG | 1 cut(s) | 107 |
| AcyI | GRCGYC | 1 cut(s) | 156 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 199, 331 |
| AflII | CTTAAG | 1 cut(s) | 605 |
| AgsI | TTSAA | 1 cut(s) | 352 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 160 |
| Alw26I | GTCTC | 4 cut(s) | 35, 254, 312, 575 |
| Ama87I | CYCGRG | 1 cut(s) | 428 |
| AoxI | GGCC | 3 cut(s) | 79, 126, 390 |
| ApeKI | GCWGC | 1 cut(s) | 487 |
| ApoI | RAATTY | 1 cut(s) | 209 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 527 |
| AsuC2I | CCSGG | 1 cut(s) | 556 |
| AsuHPI | GGTGA | 3 cut(s) | 28, 110, 374 |
| AvaI | CYCGRG | 1 cut(s) | 428 |
| BanII | GRGCYC | 1 cut(s) | 429 |
| BbsI | GAAGAC | 1 cut(s) | 530 |
| BbvI | GCAGC | 1 cut(s) | 474 |
| BccI | CCATC | 3 cut(s) | 223, 487, 505 |
| BceAI | ACGGC | 1 cut(s) | 411 |
| BclI | TGATCA | 1 cut(s) | 249 |
| BcnI | CCSGG | 1 cut(s) | 556 |
| BcoDI | GTCTC | 4 cut(s) | 35, 254, 312, 575 |
| BfaI | CTAG | 2 cut(s) | 6, 479 |
| BfmI | CTRYAG | 4 cut(s) | 142, 224, 406, 488 |
| BfrI | CTTAAG | 1 cut(s) | 605 |
| BisI | GCNGC | 2 cut(s) | 129, 488 |
| BlsI | GCNGC | 2 cut(s) | 130, 489 |
| Bme1390I | CCNGG | 1 cut(s) | 556 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 160 |
| BmeT110I | CYCGRG | 1 cut(s) | 428 |
| BmrFI | CCNGG | 1 cut(s) | 556 |
| BpiI | GAAGAC | 1 cut(s) | 530 |
| BpuEI | CTTGAG | 1 cut(s) | 327 |
| BpuMI | CCSGG | 1 cut(s) | 556 |
| BsaHI | GRCGYC | 1 cut(s) | 156 |
| BsaI | GGTCTC | 1 cut(s) | 254 |
| BsaJI | CCNNGG | 2 cut(s) | 393, 429 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 199, 331 |
| Bse1I | ACTGG | 1 cut(s) | 204 |
| Bse3DI | GCAATG | 1 cut(s) | 30 |
| BseDI | CCNNGG | 2 cut(s) | 393, 429 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 199, 331 |
| BseMI | GCAATG | 1 cut(s) | 30 |
| BseNI | ACTGG | 1 cut(s) | 204 |
| BseXI | GCAGC | 1 cut(s) | 474 |
| Bsh1236I | CGCG | 1 cut(s) | 131 |
| BshFI | GGCC | 3 cut(s) | 81, 128, 392 |
| BsiHKCI | CYCGRG | 1 cut(s) | 428 |
| BsiSI | CCGG | 1 cut(s) | 555 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 199, 331 |
| BsmAI | GTCTC | 4 cut(s) | 35, 254, 312, 575 |
| BsnI | GGCC | 3 cut(s) | 81, 128, 392 |
| Bso31I | GGTCTC | 1 cut(s) | 254 |
| BsoBI | CYCGRG | 1 cut(s) | 428 |
| Bsp1286I | GDGCHC | 1 cut(s) | 429 |
| Bsp143I | GATC | 6 cut(s) | 135, 249, 336, 399, 563, 599 |
| BspACI | CCGC | 1 cut(s) | 129 |
| BspANI | GGCC | 3 cut(s) | 81, 128, 392 |
| BspFNI | CGCG | 1 cut(s) | 131 |
| BspMAI | CTGCAG | 1 cut(s) | 492 |
| BspTI | CTTAAG | 1 cut(s) | 605 |
| BspTNI | GGTCTC | 1 cut(s) | 254 |
| BsrDI | GCAATG | 1 cut(s) | 30 |
| BsrI | ACTGG | 1 cut(s) | 204 |
| BssECI | CCNNGG | 2 cut(s) | 393, 429 |
| BssMI | GATC | 6 cut(s) | 135, 249, 336, 399, 563, 599 |
| BssNI | GRCGYC | 1 cut(s) | 156 |
| Bst6I | CTCTTC | 2 cut(s) | 310, 573 |
| BstACI | GRCGYC | 1 cut(s) | 156 |
| BstAFI | CTTAAG | 1 cut(s) | 605 |
| BstDSI | CCRYGG | 1 cut(s) | 393 |
| BstFNI | CGCG | 1 cut(s) | 131 |
| BstKTI | GATC | 6 cut(s) | 138, 252, 339, 402, 566, 602 |
| BstMAI | GTCTC | 4 cut(s) | 35, 254, 312, 575 |
| BstMBI | GATC | 6 cut(s) | 135, 249, 336, 399, 563, 599 |
| BstSCI | CCNGG | 1 cut(s) | 554 |
| BstSFI | CTRYAG | 4 cut(s) | 142, 224, 406, 488 |
| BstUI | CGCG | 1 cut(s) | 131 |
| BstV1I | GCAGC | 1 cut(s) | 474 |
| BstV2I | GAAGAC | 1 cut(s) | 530 |
| BsuRI | GGCC | 3 cut(s) | 81, 128, 392 |
| BtgI | CCRYGG | 1 cut(s) | 393 |
| CseI | GACGC | 1 cut(s) | 164 |
| CviJI | RGCY | 6 cut(s) | 81, 128, 147, 392, 411, 427 |
| CviKI_1 | RGCY | 6 cut(s) | 81, 128, 147, 392, 411, 427 |
| DpnI | GATC | 6 cut(s) | 137, 251, 338, 401, 565, 601 |
| DpnII | GATC | 6 cut(s) | 135, 249, 336, 399, 563, 599 |
| DriI | GACNNNNNGTC | 1 cut(s) | 160 |
| Eam1104I | CTCTTC | 2 cut(s) | 310, 573 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 160 |
| EarI | CTCTTC | 2 cut(s) | 310, 573 |
| Eco147I | AGGCCT | 1 cut(s) | 81 |
| Eco24I | GRGCYC | 1 cut(s) | 429 |
| Eco31I | GGTCTC | 1 cut(s) | 254 |
| Eco57I | CTGAAG | 1 cut(s) | 107 |
| Eco88I | CYCGRG | 1 cut(s) | 428 |
| EcoT38I | GRGCYC | 1 cut(s) | 429 |
| FaiI | YATR | 6 cut(s) | 144, 221, 300, 408, 485, 534 |
| FbaI | TGATCA | 1 cut(s) | 249 |
| Fnu4HI | GCNGC | 2 cut(s) | 129, 488 |
| FriOI | GRGCYC | 1 cut(s) | 429 |
| Fsp4HI | GCNGC | 2 cut(s) | 129, 488 |
| FspBI | CTAG | 2 cut(s) | 6, 479 |
| GluI | GCNGC | 2 cut(s) | 129, 488 |
| HaeIII | GGCC | 3 cut(s) | 81, 128, 392 |
| HapII | CCGG | 1 cut(s) | 555 |
| HgaI | GACGC | 1 cut(s) | 164 |
| Hin1I | GRCGYC | 1 cut(s) | 156 |
| HinfI | GANTC | 3 cut(s) | 161, 419, 542 |
| HpaII | CCGG | 1 cut(s) | 555 |
| HphI | GGTGA | 3 cut(s) | 28, 110, 374 |
| Hpy166II | GTNNAC | 2 cut(s) | 193, 457 |
| Hpy188I | TCNGA | 3 cut(s) | 87, 166, 424 |
| Hpy188III | TCNNGA | 5 cut(s) | 48, 185, 215, 449, 567 |
| Hpy8I | GTNNAC | 2 cut(s) | 193, 457 |
| Hpy99I | CGWCG | 2 cut(s) | 54, 136 |
| HpyAV | CCTTC | 4 cut(s) | 7, 92, 274, 349 |
| HpyCH4V | TGCA | 2 cut(s) | 25, 490 |
| Hsp92I | GRCGYC | 1 cut(s) | 156 |
| Ksp22I | TGATCA | 1 cut(s) | 249 |
| Kzo9I | GATC | 6 cut(s) | 135, 249, 336, 399, 563, 599 |
| LmnI | GCTCC | 2 cut(s) | 295, 558 |
| LpnPI | CCDG | 4 cut(s) | 170, 185, 434, 568 |
| Lsp1109I | GCAGC | 1 cut(s) | 474 |
| MaeI | CTAG | 2 cut(s) | 6, 479 |
| MaeIII | GTNAC | 3 cut(s) | 116, 202, 380 |
| MalI | GATC | 6 cut(s) | 137, 251, 338, 401, 565, 601 |
| MboI | GATC | 6 cut(s) | 135, 249, 336, 399, 563, 599 |
| MboII | GAAGA | 5 cut(s) | 100, 327, 364, 535, 590 |
| MhlI | GDGCHC | 1 cut(s) | 429 |
| MluCI | AATT | 2 cut(s) | 209, 279 |
| MlyI | GAGTC | 2 cut(s) | 170, 413 |
| MmeI | TCCRAC | 1 cut(s) | 144 |
| MnlI | CCTC | 2 cut(s) | 160, 424 |
| MroXI | GAANNNNTTC | 1 cut(s) | 527 |
| MseI | TTAA | 1 cut(s) | 606 |
| MspCI | CTTAAG | 1 cut(s) | 605 |
| MspI | CCGG | 1 cut(s) | 555 |
| MspR9I | CCNGG | 1 cut(s) | 556 |
| MvnI | CGCG | 1 cut(s) | 131 |
| NciI | CCSGG | 1 cut(s) | 556 |
| NdeII | GATC | 6 cut(s) | 135, 249, 336, 399, 563, 599 |
| NmeAIII | GCCGAG | 1 cut(s) | 184 |
| NmuCI | GTSAC | 2 cut(s) | 116, 380 |
| PceI | AGGCCT | 1 cut(s) | 81 |
| PdmI | GAANNNNTTC | 1 cut(s) | 527 |
| PfeI | GAWTC | 1 cut(s) | 542 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 199 |
| PfoI | TCCNGGA | 1 cut(s) | 554 |
| PkrI | GCNGC | 2 cut(s) | 130, 489 |
| PleI | GAGTC | 2 cut(s) | 169, 413 |
| PpsI | GAGTC | 2 cut(s) | 169, 413 |
| PstI | CTGCAG | 1 cut(s) | 492 |
| SaqAI | TTAA | 1 cut(s) | 606 |
| SatI | GCNGC | 2 cut(s) | 129, 488 |
| Sau3AI | GATC | 6 cut(s) | 135, 249, 336, 399, 563, 599 |
| SchI | GAGTC | 2 cut(s) | 170, 413 |
| ScrFI | CCNGG | 1 cut(s) | 556 |
| SduI | GDGCHC | 1 cut(s) | 429 |
| SetI | ASST | 5 cut(s) | 18, 171, 266, 360, 435 |
| SfcI | CTRYAG | 4 cut(s) | 142, 224, 406, 488 |
| SmlI | CTYRAG | 2 cut(s) | 342, 605 |
| SmoI | CTYRAG | 2 cut(s) | 342, 605 |
| Sse9I | AATT | 2 cut(s) | 209, 279 |
| SseBI | AGGCCT | 1 cut(s) | 81 |
| SsiI | CCGC | 1 cut(s) | 129 |
| SspMI | CTAG | 2 cut(s) | 6, 479 |
| StuI | AGGCCT | 1 cut(s) | 81 |
| StyD4I | CCNGG | 1 cut(s) | 554 |
| TaqI | TCGA | 1 cut(s) | 545 |
| TasI | AATT | 2 cut(s) | 209, 279 |
| TauI | GCSGC | 1 cut(s) | 131 |
| TfiI | GAWTC | 1 cut(s) | 542 |
| Tru1I | TTAA | 1 cut(s) | 606 |
| Tru9I | TTAA | 1 cut(s) | 606 |
| TseFI | GTSAC | 2 cut(s) | 116, 380 |
| TseI | GCWGC | 1 cut(s) | 487 |
| Tsp45I | GTSAC | 2 cut(s) | 116, 380 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 199 |
| Vha464I | CTTAAG | 1 cut(s) | 605 |
| XapI | RAATTY | 1 cut(s) | 209 |
| XmnI | GAANNNNTTC | 1 cut(s) | 527 |
| XspI | CTAG | 2 cut(s) | 6, 479 |