Agamous-like MADS-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SRF-TF | PF00319 | 1 - 25 | 3.1e-06 | SRF-type transcription factor (DNA-binding and dimerisation domain) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 362 |
| AcsI | RAATTY | 1 cut(s) | 291 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 90, 362 |
| AgsI | TTSAA | 1 cut(s) | 44 |
| Alw26I | GTCTC | 1 cut(s) | 284 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 310 |
| Ama87I | CYCGRG | 1 cut(s) | 83 |
| AoxI | GGCC | 1 cut(s) | 92 |
| ApoI | RAATTY | 1 cut(s) | 291 |
| AsuC2I | CCSGG | 2 cut(s) | 84, 85 |
| AsuHPI | GGTGA | 1 cut(s) | 274 |
| AvaI | CYCGRG | 1 cut(s) | 83 |
| BcnI | CCSGG | 2 cut(s) | 84, 85 |
| BcoDI | GTCTC | 1 cut(s) | 284 |
| Bme1390I | CCNGG | 2 cut(s) | 84, 85 |
| BmeT110I | CYCGRG | 1 cut(s) | 83 |
| BmrFI | CCNGG | 2 cut(s) | 84, 85 |
| BpuMI | CCSGG | 2 cut(s) | 84, 85 |
| Bsa29I | ATCGAT | 1 cut(s) | 348 |
| BsaJI | CCNNGG | 2 cut(s) | 83, 84 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 90, 362 |
| BseCI | ATCGAT | 1 cut(s) | 348 |
| BseDI | CCNNGG | 2 cut(s) | 83, 84 |
| BseGI | GGATG | 1 cut(s) | 201 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 90, 362 |
| BseMII | CTCAG | 1 cut(s) | 37 |
| BshFI | GGCC | 1 cut(s) | 94 |
| BshVI | ATCGAT | 1 cut(s) | 348 |
| BsiHKCI | CYCGRG | 1 cut(s) | 83 |
| BsiSI | CCGG | 1 cut(s) | 84 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 90, 362 |
| BsmAI | GTCTC | 1 cut(s) | 284 |
| BsmI | GAATGC | 1 cut(s) | 240 |
| BsnI | GGCC | 1 cut(s) | 94 |
| BsoBI | CYCGRG | 1 cut(s) | 83 |
| Bsp143I | GATC | 3 cut(s) | 198, 331, 349 |
| BspANI | GGCC | 1 cut(s) | 94 |
| BspCNI | CTCAG | 1 cut(s) | 36 |
| BspDI | ATCGAT | 1 cut(s) | 348 |
| BssECI | CCNNGG | 2 cut(s) | 83, 84 |
| BssMI | GATC | 3 cut(s) | 198, 331, 349 |
| Bst6I | CTCTTC | 1 cut(s) | 149 |
| BstDEI | CTNAG | 3 cut(s) | 23, 188, 335 |
| BstF5I | GGATG | 1 cut(s) | 201 |
| BstKTI | GATC | 3 cut(s) | 201, 334, 352 |
| BstMAI | GTCTC | 1 cut(s) | 284 |
| BstMBI | GATC | 3 cut(s) | 198, 331, 349 |
| BstNSI | RCATGY | 1 cut(s) | 51 |
| BstSCI | CCNGG | 2 cut(s) | 82, 83 |
| Bsu15I | ATCGAT | 1 cut(s) | 348 |
| BsuRI | GGCC | 1 cut(s) | 94 |
| BsuTUI | ATCGAT | 1 cut(s) | 348 |
| BtsCI | GGATG | 1 cut(s) | 201 |
| CaiI | CAGNNNCTG | 1 cut(s) | 310 |
| Cfr9I | CCCGGG | 1 cut(s) | 83 |
| ClaI | ATCGAT | 1 cut(s) | 348 |
| CviAII | CATG | 1 cut(s) | 48 |
| CviJI | RGCY | 4 cut(s) | 75, 94, 174, 343 |
| CviKI_1 | RGCY | 4 cut(s) | 75, 94, 174, 343 |
| DdeI | CTNAG | 3 cut(s) | 23, 188, 335 |
| DpnI | GATC | 3 cut(s) | 200, 333, 351 |
| DpnII | GATC | 3 cut(s) | 198, 331, 349 |
| DraI | TTTAAA | 1 cut(s) | 123 |
| Eam1104I | CTCTTC | 1 cut(s) | 149 |
| EarI | CTCTTC | 1 cut(s) | 149 |
| Eco88I | CYCGRG | 1 cut(s) | 83 |
| EcoRI | GAATTC | 1 cut(s) | 291 |
| FaeI | CATG | 1 cut(s) | 51 |
| FaiI | YATR | 5 cut(s) | 49, 140, 146, 269, 326 |
| FatI | CATG | 1 cut(s) | 47 |
| FokI | GGATG | 1 cut(s) | 208 |
| HaeIII | GGCC | 1 cut(s) | 94 |
| HapII | CCGG | 1 cut(s) | 84 |
| Hin1II | CATG | 1 cut(s) | 51 |
| HinfI | GANTC | 1 cut(s) | 307 |
| HpaII | CCGG | 1 cut(s) | 84 |
| HphI | GGTGA | 1 cut(s) | 274 |
| Hpy166II | GTNNAC | 1 cut(s) | 20 |
| Hpy188I | TCNGA | 2 cut(s) | 79, 312 |
| Hpy188III | TCNNGA | 2 cut(s) | 304, 368 |
| Hpy8I | GTNNAC | 1 cut(s) | 20 |
| HpyAV | CCTTC | 3 cut(s) | 105, 111, 244 |
| HpyCH4V | TGCA | 1 cut(s) | 238 |
| HpyF3I | CTNAG | 3 cut(s) | 23, 188, 335 |
| Hsp92II | CATG | 1 cut(s) | 51 |
| Kzo9I | GATC | 3 cut(s) | 198, 331, 349 |
| LpnPI | CCDG | 4 cut(s) | 90, 97, 273, 317 |
| MalI | GATC | 3 cut(s) | 200, 333, 351 |
| MboI | GATC | 3 cut(s) | 198, 331, 349 |
| MboII | GAAGA | 2 cut(s) | 19, 166 |
| MluCI | AATT | 6 cut(s) | 39, 57, 254, 291, 299, 360 |
| MnlI | CCTC | 1 cut(s) | 306 |
| MseI | TTAA | 3 cut(s) | 122, 132, 221 |
| MspI | CCGG | 1 cut(s) | 84 |
| MspR9I | CCNGG | 2 cut(s) | 84, 85 |
| Mva1269I | GAATGC | 1 cut(s) | 240 |
| NciI | CCSGG | 2 cut(s) | 84, 85 |
| NdeII | GATC | 3 cut(s) | 198, 331, 349 |
| NlaIII | CATG | 1 cut(s) | 51 |
| NspI | RCATGY | 1 cut(s) | 51 |
| PctI | GAATGC | 1 cut(s) | 240 |
| PfeI | GAWTC | 1 cut(s) | 307 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 362 |
| PstNI | CAGNNNCTG | 1 cut(s) | 310 |
| SaqAI | TTAA | 3 cut(s) | 122, 132, 221 |
| Sau3AI | GATC | 3 cut(s) | 198, 331, 349 |
| ScrFI | CCNGG | 2 cut(s) | 84, 85 |
| SetI | ASST | 2 cut(s) | 318, 341 |
| SgeI | CNNG | 8 cut(s) | 60, 95, 96, 97, 117, 188, 300, 316 |
| SmaI | CCCGGG | 1 cut(s) | 85 |
| Sse9I | AATT | 6 cut(s) | 39, 57, 254, 291, 299, 360 |
| StyD4I | CCNGG | 2 cut(s) | 82, 83 |
| TaqI | TCGA | 3 cut(s) | 111, 348, 367 |
| TasI | AATT | 6 cut(s) | 39, 57, 254, 291, 299, 360 |
| TfiI | GAWTC | 1 cut(s) | 307 |
| Tru1I | TTAA | 3 cut(s) | 122, 132, 221 |
| Tru9I | TTAA | 3 cut(s) | 122, 132, 221 |
| TspDTI | ATGAA | 2 cut(s) | 20, 341 |
| TspMI | CCCGGG | 1 cut(s) | 83 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 362 |
| XapI | RAATTY | 1 cut(s) | 291 |
| XceI | RCATGY | 1 cut(s) | 51 |
| XmaI | CCCGGG | 1 cut(s) | 83 |