pycom01g01810

aspartic-type endopeptidase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
1634672 .. 1639380
4709 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g01810.4

Sequence Viewer

Length: 3747 bp
ATGGTTTTGGTTGATGCATCTACTAGATGGTCACATGTTTGTCTCTTGTCTACTCGGAATGTAGCTTTTGCGAGACTTCTTGCTCAGATAATTAAGTTGCACGCACAGTTCCCAGATTACCCTATTAAGTCAATCCGATTTGATAACGCTAGTGAATTTACGTCTCAAACCTTTGATGATTACTGCATGACATTGGGCATCGATGTTCAACACCCCTGGCTTAAGTTAATAGCCCACACTCTGCTTCTGAAAACAAAATTGCTAGTTTCTGCATGGGGATATGCCATCTTACATGCTGCATCATTGGTTCGATTGAGACCTATAGCCAACCACCAATACTTATCAATACAACTTGTGTTTGGGCATCAACCAAACATTTCACATTTACGAGTTTTTGGTTTTGCTGTTTATGTACATATTGTACCACCACAACGCATTAAAATGGGACCCCAGTGCCGACTGGGAATTTATGTGGATTTTGATTCACCATCTATCATTAGATATTTGGAACCCTTGACAGCTGATATGTTTACAACTCATTTTACTGATTGTCACTTTGATGAGACAGTCTTCCTGTCGTTAGGGGGAGAAAAGACCGTTCCAAAAGAACGAAAAGAGCTGACATGGGTTGTTCCCACCTTATCTCATTTTAATCCACGTAGCACTCAATGTGAAAATGAAGTGAAAAGGATCGATCATCTTCAAAGTATTGCTAATCAAATGCCAGATGCATTTAATGATGCTATGAAAGTGACAAAATCACATATACCAGCTGCAAATGCACCTGCAAGAATTGATGTCCCTGTTAGACAAAATAAAATGGCAGCGAATGATTCATATGATGCATGCTTAACTCGTGGTAGACCTCCAGGTTCAAAAGATTCAGCCCCTCGAAAGAGAAAGTCGAGGGCACAATTGAATCCAAATGAAATCATTCAAGAAGAAAAAATGAATAACACATCCACAATTCATGATTCTATACCTTCAGAAAAAATAAAATTGTGGGATCAGAATGAAATAATCATCGACGACATGTTCGCATTCCCCCACTCTGTTGATGAATGCACACAGAGACAAGATTGGTATAAGTGGAAAGATACAATCCAGGTAGAATTAAATTCATTGGAAAGGCGAAATGTTTTTGGACCAGTAGTATTCACAAGGAAACGCAATGAGAAAAATAAGACTGCAAGATATAAAGCACAACTCATTGCACAAGGTTTTTCACAAAGACTTGGAATTGATTACGAGGAGACATACTCCCATGTAATGGACGCAATTACATTTCGTTACTTAATAAGTTTAGTGGTTCCAGAAAAACTTGACATGCGACTTATGGTTGTCATCACCGCATATCTATATCGAGAATTAGATACTGAAATATATATATATATATATATATATATATATATATATATATATATGAAAGTCCTAGAAGGACTTAAGTTTAAGGATCGATCATTGCATAGGCTGAAACAATCTGGACGAATGTGGTATAATTGTCTCAGTGAGTATTTGATTAAAGCAAGATATATCAACAATGTCATTTTCCCTTGTGTGTTCATTAAGAAATCCAACTCGGAATTTGCTATAGCGGCAGTATATCAGCTTACATTGAAAAAAATGTTGAAGCGATTTGGCATGGACAAGTCTTATTATCCACTCAGCACGCCAATGGTCGTTCGTTCTTTGGACATTAAGAAAGATCCATTCTGTCCAAAAGAAGATGATGAACTGGTCCTTCGTCCAGAAGTACCATATTTGAGTGCAATAGGTGCTTTATTGTATTTAGCACAATGTACTAGACTAGATATAGCTTTTTTAGTCCACTTGTTAGCAAGGTATAGCTTCGCTCCGACAATTCGTAATTGGAAGGGAGTCAAAGATGTATTGCGATACCTTCGTGGGACAACATACATGGGTCTCTTCTACTCAAAGAAATCCACAAATGACCAGATCATTGTTGGATATGCAAATGCTGGTTTTCTCTTTGATCCACATAAAGCCCGCTCACAAACTGGATATGTGTTTAAGAATGGAGATACAACAATCTCATGGTGCTCAACAAAGCAAACATTAGTTGCTACATCTTCAAATCATTCAGAAATACTTGCTTTACATGAAGCAAGTCGTGAATTCATGTGGTTTACCATAAAAAATAGACACACCAACTTCATCAAGGGCGATAAAACTAAACACATATCTCCCAAGTTTTTCAGTGCATATGAGCTTATTGAAGTCAGACCAATCCGTTCCAATGAAAATCTGGCAGATTTGTTCACCAAATCTCTACCAAAATGCACGCTTCAGAAGATAGTTTGGAAAATGCGGAATCAGGGGGAGATATATATATCAGGGGGAGCATCCATGATACATTCATGTTGTGCTCTTTTTCCTTCGATTAGGATTTTTCCCACTGGGTTTTTTCCTATCAAGGTTTTAACGAGGCAACATAAGCATAATGTGGGGCATCCAAGGGGGAGTGTTGAAAATGCTAGTGGGTTAATGAATGCCCACAATGATATTGAAAACCTTGGTAGATTTTTTCAATACCAACACAAATTGGATTTGCAACATTGGCAGATGAATGAAAACATTGGTAGTATATTCAAAACGTGTGTTGTAAATTTTCAACATGTAATAATACGAAGTTGCTCTATAAATAGAGCAATCCAACTGCTATCAACAGATATAGAAAAGAGAAAGAAAGAAAAGATCAATAACATCATTATCTATTCCTACCTCCTTTATTTGTCATCCTCTTGTACTATAGTTACAGTTTATAACAAATTGAAGATTATATATTACTATTTAAGATGTATACTGTTTAAGATTATATACTTTTTGTTTAAAGAAATTAGGTTCTCATCCCTCTTTTTTTTAACTCCATTGATTGAAACCTTATTAATTATTTTAATAATAAAATATTTTACATTGGCACTTCAAAAATCTCATTCTACACTCCTCACAAATGTATTTTTCTTTCTAAATATAGAAAGTTTGGAGTCATTTAGTGTTAAAAAAGTTACATTTTGTTGCAGTTCTATTAGATTAGGAATTAGAGTTGATTACCTATTAAGATTTGCACAATGGGGTAAAATAGAACATACCTCACAATTACACATCTCTCTCTTCTCTCTACTATTGTCTATGCCTACAACACGTTATCAGCACGCTCTTGACACTGCACTAATGAGAGTTCGATTTTCAATCAGGAGATTTATTGAATTGATCTACATGTTATTGATTCAATTTAATTTTTCTTTGTTGAACGTGATACAACGCATTAGAGATAAAATTTCGGCTTTCCAAGAAAGAGCTTCAACAAATTCGAAGGCTTTTGTTTACATTTATATTTACCTTCCGATATATATATTGTATATGTTTCATATAAACCCTAATTTGATATCCCTAGGGTTTGCCTTGCATGATATATATATTTTCAAGTTTGTGCCGCACCCCCTACCATTCATTCATTCATTAAATCATACATTTAGCCACCAAACACCTAAATCACCACAGTGTCGCAACAAGGAGAAAGAAGGAAGGGAGAGCCTTTGTGCCGTGCCTATGCCCAAGCTTTTGGGAGTGTTAGAGCGTCTCTGGGGTGTCTTCTATCCTTGTTTGAGTTTTACAATTATGTTGATTTCATTGTTAATTTCTTCAAAGCCATCGACATATGTTTTATATGAATTGATTTCCTCCAGTTTTTATTTCTTGAATTGTGAATGCAATTTACTTAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1249

Amino Acids

145.15

Weight (kDa)

9.43

Isoelectric Point (pI)

41.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000161)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g36192 FvH4_3g41702 FvH4_4g13933 FvH4_6g39331 FvH4_6g44542
malus_domestica MD17G1101700.v1.1
pyrus_communis pycom01g01810 pycom01g03340 pycom05g22610 pycom13g03220 pycom13g23770 pycom13g26870 pycom17g17400 pycom17g17410 pycom17g17890
rosa_chinensis RchiOBHm_Chr2g0129881 RchiOBHm_Chr2g0163801 RchiOBHm_Chr4g0392871 RchiOBHm_Chr7g0218471
rosa_multiflora Rmu_co8005914.1_g000001 Rmu_co8214666.1_g000002 Rmu_co8253889.1_g000001 Rmu_co8429419.1_g000001 Rmu_sc0000031.1_g000049 Rmu_sc0000091.1_g000004 Rmu_sc0000103.1_g000050 Rmu_sc0000147.1_g000047 Rmu_sc0000185.1_g000026 Rmu_sc0000235.1_g000056 Rmu_sc0000247.1_g000002 Rmu_sc0000310.1_g000010 Rmu_sc0000353.1_g000034 Rmu_sc0000353.1_g000035 Rmu_sc0000367.1_g000046 Rmu_sc0000420.1_g000034 Rmu_sc0000461.1_g000022 Rmu_sc0000544.1_g000007 Rmu_sc0000544.1_g000009 Rmu_sc0000607.1_g000032 Rmu_sc0000647.1_g000011 Rmu_sc0000675.1_g000049 Rmu_sc0000680.1_g000015 Rmu_sc0000795.1_g000112 Rmu_sc0000851.1_g000013 Rmu_sc0000868.1_g000019 Rmu_sc0000869.1_g000009 Rmu_sc0000898.1_g000061 Rmu_sc0000990.1_g000006 Rmu_sc0001009.1_g000006 Rmu_sc0001051.1_g000034 Rmu_sc0001067.1_g000005 Rmu_sc0001124.1_g000020 Rmu_sc0001142.1_g000016 Rmu_sc0001231.1_g000015 Rmu_sc0001235.1_g000013 Rmu_sc0001336.1_g000036 Rmu_sc0001552.1_g000033 Rmu_sc0001604.1_g000003 Rmu_sc0001605.1_g000009 Rmu_sc0001605.1_g000011 Rmu_sc0001668.1_g000025 Rmu_sc0001698.1_g000009 Rmu_sc0001721.1_g000010 Rmu_sc0001735.1_g000004 Rmu_sc0001832.1_g000017 Rmu_sc0001844.1_g000024 Rmu_sc0001880.1_g000026 Rmu_sc0001896.1_g000018 Rmu_sc0001918.1_g000011 Rmu_sc0002072.1_g000022 Rmu_sc0002109.1_g000003 Rmu_sc0002142.1_g000017 Rmu_sc0002166.1_g000001 Rmu_sc0002207.1_g000015 Rmu_sc0002346.1_g000001 Rmu_sc0002460.1_g000009 Rmu_sc0002460.1_g000043 Rmu_sc0002460.1_g000071 Rmu_sc0002672.1_g000001 Rmu_sc0002699.1_g000019 Rmu_sc0002736.1_g000007 Rmu_sc0002773.1_g000003 Rmu_sc0002893.1_g000006 Rmu_sc0002968.1_g000014 Rmu_sc0002968.1_g000015 Rmu_sc0003032.1_g000020 Rmu_sc0003044.1_g000024 Rmu_sc0003200.1_g000007 Rmu_sc0003261.1_g000031 Rmu_sc0003347.1_g000014 Rmu_sc0003385.1_g000019 Rmu_sc0003385.1_g000020 Rmu_sc0003419.1_g000017 Rmu_sc0003605.1_g000029 Rmu_sc0003679.1_g000010 Rmu_sc0003708.1_g000002 Rmu_sc0003737.1_g000033 Rmu_sc0003981.1_g000021 Rmu_sc0004101.1_g000009 Rmu_sc0004119.1_g000009 Rmu_sc0004248.1_g000021 Rmu_sc0004362.1_g000013 Rmu_sc0004520.1_g000020 Rmu_sc0004741.1_g000017 Rmu_sc0004771.1_g000007 Rmu_sc0004835.1_g000027 Rmu_sc0004969.1_g000010 Rmu_sc0005037.1_g000002 Rmu_sc0005272.1_g000006 Rmu_sc0005584.1_g000017 Rmu_sc0005652.1_g000005 Rmu_sc0005670.1_g000010 Rmu_sc0005781.1_g000035 Rmu_sc0005816.1_g000026 Rmu_sc0005852.1_g000003 Rmu_sc0006087.1_g000008 Rmu_sc0006152.1_g000005 Rmu_sc0006160.1_g000001 Rmu_sc0006313.1_g000014 Rmu_sc0006347.1_g000001 Rmu_sc0006583.1_g000024 Rmu_sc0006711.1_g000018 Rmu_sc0006952.1_g000003 Rmu_sc0006976.1_g000006 Rmu_sc0007115.1_g000006 Rmu_sc0007490.1_g000028 Rmu_sc0007740.1_g000003 Rmu_sc0007779.1_g000001 Rmu_sc0007907.1_g000003 Rmu_sc0007967.1_g000003 Rmu_sc0008456.1_g000006 Rmu_sc0008578.1_g000003 Rmu_sc0008642.1_g000001 Rmu_sc0008848.1_g000001 Rmu_sc0010065.1_g000009 Rmu_sc0010263.1_g000003 Rmu_sc0010632.1_g000004 Rmu_sc0011050.1_g000004 Rmu_sc0011563.1_g000005 Rmu_sc0011854.1_g000001 Rmu_sc0012216.1_g000003 Rmu_sc0012689.1_g000002 Rmu_sc0012945.1_g000001 Rmu_sc0013071.1_g000003 Rmu_sc0013305.1_g000008 Rmu_sc0013698.1_g000009 Rmu_sc0013772.1_g000007 Rmu_sc0013874.1_g000001 Rmu_sc0014217.1_g000001 Rmu_sc0014478.1_g000019 Rmu_sc0014724.1_g000002 Rmu_sc0016563.1_g000002 Rmu_sc0016563.1_g000003 Rmu_sc0017108.1_g000001 Rmu_sc0017408.1_g000002 Rmu_sc0020248.1_g000001 Rmu_sc0021416.1_g000005 Rmu_sc0022221.1_g000003 Rmu_sc0022402.1_g000002 Rmu_sc0023172.1_g000001 Rmu_sc0024783.1_g000001 Rmu_sc0028152.1_g000001 Rmu_sc0028541.1_g000001 Rmu_sc0029935.1_g000001 Rmu_sc0030041.1_g000001 Rmu_sc0035924.1_g000001 Rmu_sc0038113.1_g000002 Rmu_sc0040377.1_g000001 Rmu_ssc0000041.1_g000024 Rmu_ssc0000197.1_g000066 Rmu_ssc0000213.1_g000082 Rmu_ssc0000215.1_g000018
rosa_roxburghii Rroxscaffold_152G00434500 Rroxscaffold_3G00223490 Rroxscaffold_3G00226440 Rroxscaffold_3G00237960 Rroxscaffold_6G00394150
rosa_samantha Rh5CG379600 Rh5CG449200 Rh6DG448500
rosa_wichuraiana Rw0G004320 Rw1G010800 Rw2G031280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2784
AarI CACCTGC 1 cut(s) 793
Acc36I ACCTGC 1 cut(s) 793
AccB7I CCANNNNNTGG 1 cut(s) 1270
AccBSI CCGCTC 1 cut(s) 2010
AccI GTMKAC 3 cut(s) 50, 862, 2821
AciI CCGC 5 cut(s) 1350, 1595, 2008, 2329, 3455
AclWI GGATC 5 cut(s) 698, 1014, 1461, 1700, 1988
AcsI RAATTY 8 cut(s) 155, 465, 1117, 1583, 2135, 2626, 3297, 3328
AcuI CTGAAG 2 cut(s) 969, 2291
AfaI GTAC 5 cut(s) 414, 423, 1755, 1801, 2767
AfiI CCNNNNNNNGG 1 cut(s) 1270
AflII CTTAAG 2 cut(s) 221, 1442
AflIII ACRYGT 6 cut(s) 34, 1032, 2615, 2635, 3161, 3237
AjnI CCWGG 3 cut(s) 215, 868, 1104
AleI CACNNNNGTG 1 cut(s) 3520
Alw21I GWGCWC 2 cut(s) 2063, 2389
AlwI GGATC 5 cut(s) 698, 1014, 1461, 1700, 1988
ApeKI GCWGC 3 cut(s) 296, 773, 824
ApoI RAATTY 8 cut(s) 155, 465, 1117, 1583, 2135, 2626, 3297, 3328
ArsI GACNNNNNNTTYG 2 cut(s) 1019, 1051
AseI ATTAAT 1 cut(s) 2906
Asp700I GAANNNNTTC 1 cut(s) 933
AspA2I CCTAGG 1 cut(s) 3412
AspS9I GGNCC 3 cut(s) 446, 1145, 1738
AsuHPI GGTGA 4 cut(s) 477, 1339, 2272, 3507
AsuII TTCGAA 1 cut(s) 3332
AvaII GGWCC 3 cut(s) 446, 1145, 1738
AvrII CCTAGG 1 cut(s) 3412
BaeGI GKGCMC 1 cut(s) 913
BaeI ACNNNNGTAYC 2 cut(s) 1888, 1921
BauI CACGAG 1 cut(s) 855
BbsI GAAGAC 2 cut(s) 562, 3604
Bbv12I GWGCWC 2 cut(s) 2063, 2389
BbvI GCAGC 3 cut(s) 283, 760, 836
BccI CCATC 4 cut(s) 21, 293, 496, 3679
BceAI ACGGC 1 cut(s) 3548
BciT130I CCWGG 3 cut(s) 217, 870, 1106
BfaI CTAG 8 cut(s) 24, 150, 263, 1433, 1803, 1808, 2496, 3413
BfmI CTRYAG 3 cut(s) 321, 1590, 2769
BfrI CTTAAG 2 cut(s) 221, 1442
BfuAI ACCTGC 1 cut(s) 793
BisI GCNGC 5 cut(s) 297, 774, 825, 1596, 3455
BlnI CCTAGG 1 cut(s) 3412
BlsI GCNGC 5 cut(s) 298, 775, 826, 1597, 3456
Bme1390I CCNGG 3 cut(s) 217, 870, 1106
Bme18I GGWCC 3 cut(s) 446, 1145, 1738
BmgT120I GGNCC 3 cut(s) 446, 1145, 1738
BmiI GGNNCC 4 cut(s) 447, 448, 510, 1311
BmrFI CCNGG 3 cut(s) 217, 870, 1106
BmrI ACTGGG 3 cut(s) 445, 470, 2427
BmuI ACTGGG 3 cut(s) 445, 470, 2427
BpiI GAAGAC 2 cut(s) 562, 3604
BplI GAGNNNNNCTC 2 cut(s) 1244, 1276
BpmI CTGGAG 2 cut(s) 852, 3688
Bpu14I TTCGAA 1 cut(s) 3332
Bsa29I ATCGAT 3 cut(s) 201, 693, 1456
BsaAI YACGTR 1 cut(s) 659
BsaI GGTCTC 2 cut(s) 310, 1928
BsaJI CCNNGG 4 cut(s) 215, 2474, 2533, 3412
Bsc4I CCNNNNNNNGG 1 cut(s) 1270
Bse1I ACTGG 7 cut(s) 451, 465, 1148, 1740, 2023, 2422, 3705
Bse3DI GCAATG 3 cut(s) 1177, 1209, 1460
BseBI CCWGG 3 cut(s) 217, 870, 1106
BseCI ATCGAT 3 cut(s) 201, 693, 1456
BseDI CCNNGG 4 cut(s) 215, 2474, 2533, 3412
BseGI GGATG 5 cut(s) 959, 2363, 2470, 2756, 2867
BseLI CCNNNNNNNGG 1 cut(s) 1270
BseMI GCAATG 3 cut(s) 1177, 1209, 1460
BseMII CTCAG 3 cut(s) 98, 1519, 1678
BseNI ACTGG 7 cut(s) 451, 465, 1148, 1740, 2023, 2422, 3705
BseRI GAGGAG 2 cut(s) 1265, 2954
BseSI GKGCMC 1 cut(s) 913
BseXI GCAGC 3 cut(s) 283, 760, 836
BsgI GTGCAG 1 cut(s) 3171
BshVI ATCGAT 3 cut(s) 201, 693, 1456
BsiHKAI GWGCWC 2 cut(s) 2063, 2389
BslFI GGGAC 3 cut(s) 459, 785, 1921
BslI CCNNNNNNNGG 1 cut(s) 1270
BsmBI CGTCTC 2 cut(s) 168, 3605
BsmFI GGGAC 3 cut(s) 459, 785, 1921
BsmI GAATGC 4 cut(s) 1040, 1067, 2515, 3734
Bso31I GGTCTC 2 cut(s) 310, 1928
Bsp119I TTCGAA 1 cut(s) 3332
Bsp1286I GDGCHC 3 cut(s) 913, 2063, 2389
Bsp1407I TGTACA 1 cut(s) 412
BspACI CCGC 5 cut(s) 1350, 1595, 2008, 2329, 3455
BspCNI CTCAG 3 cut(s) 97, 1518, 1677
BspDI ATCGAT 3 cut(s) 201, 693, 1456
BspHI TCATGA 1 cut(s) 970
BspLI GGNNCC 4 cut(s) 447, 448, 510, 1311
BspMI ACCTGC 1 cut(s) 793
BspPI GGATC 5 cut(s) 698, 1014, 1461, 1700, 1988
BspT104I TTCGAA 1 cut(s) 3332
BspTI CTTAAG 2 cut(s) 221, 1442
BspTNI GGTCTC 2 cut(s) 310, 1928
BsrBI CCGCTC 1 cut(s) 2010
BsrDI GCAATG 3 cut(s) 1177, 1209, 1460
BsrGI TGTACA 1 cut(s) 412
BsrI ACTGG 7 cut(s) 451, 465, 1148, 1740, 2023, 2422, 3705
BssECI CCNNGG 4 cut(s) 215, 2474, 2533, 3412
BssNAI GTATAC 1 cut(s) 2822
BssSI CACGAG 1 cut(s) 855
BssT1I CCWWGG 3 cut(s) 2474, 2533, 3412
Bst1107I GTATAC 1 cut(s) 2822
Bst2BI CACGAG 1 cut(s) 855
Bst2UI CCWGG 3 cut(s) 217, 870, 1106
Bst4CI ACNGT 6 cut(s) 108, 568, 598, 2779, 2826, 3522
Bst6I CTCTTC 2 cut(s) 1931, 3137
BstAFI CTTAAG 2 cut(s) 221, 1442
BstAPI GCANNNNNTGC 1 cut(s) 1775
BstAUI TGTACA 1 cut(s) 412
BstBAI YACGTR 1 cut(s) 659
BstBI TTCGAA 1 cut(s) 3332
BstC8I GCNNGC 6 cut(s) 102, 847, 1670, 2008, 2303, 3174
BstDEI CTNAG 3 cut(s) 84, 1505, 1664
BstF5I GGATG 5 cut(s) 959, 2363, 2470, 2756, 2867
BstMWI GCNNNNNNNGC 5 cut(s) 779, 1595, 1775, 2455, 2578
BstNI CCWGG 3 cut(s) 217, 870, 1106
BstNSI RCATGY 7 cut(s) 38, 296, 849, 1036, 1330, 2639, 3241
BstSCI CCNGG 3 cut(s) 215, 868, 1104
BstSFI CTRYAG 3 cut(s) 321, 1590, 2769
BstSLI GKGCMC 1 cut(s) 913
BstV1I GCAGC 3 cut(s) 283, 760, 836
BstV2I GAAGAC 2 cut(s) 562, 3604
BstX2I RGATCY 1 cut(s) 1705
BstXI CCANNNNNNTGG 1 cut(s) 3583
BstYI RGATCY 1 cut(s) 1705
BstZ17I GTATAC 1 cut(s) 2822
Bsu15I ATCGAT 3 cut(s) 201, 693, 1456
BsuTUI ATCGAT 3 cut(s) 201, 693, 1456
BtsCI GGATG 5 cut(s) 959, 2363, 2470, 2756, 2867
BtsI GCAGTG 1 cut(s) 3183
BtsIMutI CAGTG 6 cut(s) 458, 1513, 2224, 2415, 3183, 3527
BveI ACCTGC 1 cut(s) 793
Cac8I GCNNGC 6 cut(s) 102, 847, 1670, 2008, 2303, 3174
CciI TCATGA 1 cut(s) 970
Cfr13I GGNCC 3 cut(s) 446, 1145, 1738
ClaI ATCGAT 3 cut(s) 201, 693, 1456
CseI GACGC 2 cut(s) 1283, 3587
Csp6I GTAC 5 cut(s) 413, 422, 1754, 1800, 2766
CviQI GTAC 5 cut(s) 413, 422, 1754, 1800, 2766
DdeI CTNAG 3 cut(s) 84, 1505, 1664
DraI TTTAAA 1 cut(s) 2851
Eam1104I CTCTTC 2 cut(s) 1931, 3137
EarI CTCTTC 2 cut(s) 1931, 3137
Eco130I CCWWGG 3 cut(s) 2474, 2533, 3412
Eco31I GGTCTC 2 cut(s) 310, 1928
Eco32I GATATC 1 cut(s) 3408
Eco47I GGWCC 3 cut(s) 446, 1145, 1738
Eco57I CTGAAG 2 cut(s) 969, 2291
EcoO109I RGGNCCY 1 cut(s) 446
EcoRI GAATTC 1 cut(s) 2135
EcoRII CCWGG 3 cut(s) 215, 868, 1104
EcoRV GATATC 1 cut(s) 3408
EcoT14I CCWWGG 3 cut(s) 2474, 2533, 3412
EcoT22I ATGCAT 3 cut(s) 19, 733, 847
ErhI CCWWGG 3 cut(s) 2474, 2533, 3412
Esp3I CGTCTC 2 cut(s) 168, 3605
FaqI GGGAC 3 cut(s) 459, 785, 1921
FauI CCCGC 1 cut(s) 2015
FauNDI CATATG 3 cut(s) 838, 2224, 3679
FblI GTMKAC 3 cut(s) 50, 862, 2821
Fnu4HI GCNGC 5 cut(s) 297, 774, 825, 1596, 3455
FokI GGATG 5 cut(s) 946, 2350, 2457, 2743, 2854
Fsp4HI GCNGC 5 cut(s) 297, 774, 825, 1596, 3455
FspBI CTAG 8 cut(s) 24, 150, 263, 1433, 1803, 1808, 2496, 3413
GluI GCNGC 5 cut(s) 297, 774, 825, 1596, 3455
GsuI CTGGAG 2 cut(s) 852, 3688
HgaI GACGC 2 cut(s) 1283, 3587
HindIII AAGCTT 1 cut(s) 3578
HinfI GANTC 9 cut(s) 482, 833, 881, 919, 974, 1878, 2332, 3005, 3247
HphI GGTGA 4 cut(s) 477, 1339, 2272, 3507
Hpy166II GTNNAC 8 cut(s) 51, 531, 863, 1828, 2148, 2280, 2822, 3346
Hpy8I GTNNAC 8 cut(s) 51, 531, 863, 1828, 2148, 2280, 2822, 3346
Hpy99I CGWCG 1 cut(s) 1031
HpyCH4III ACNGT 6 cut(s) 108, 568, 598, 2779, 2826, 3522
HpyCH4IV ACGT 5 cut(s) 161, 658, 2615, 3163, 3273
HpyF10VI GCNNNNNNNGC 5 cut(s) 779, 1595, 1775, 2455, 2578
HpyF3I CTNAG 3 cut(s) 84, 1505, 1664
HpySE526I ACGT 5 cut(s) 161, 658, 2615, 3163, 3273
KflI GGGWCCC 1 cut(s) 446
LmnI GCTCC 2 cut(s) 1858, 2360
Lsp1109I GCAGC 3 cut(s) 283, 760, 836
MaeI CTAG 8 cut(s) 24, 150, 263, 1433, 1803, 1808, 2496, 3413
MaeII ACGT 5 cut(s) 161, 658, 2615, 3163, 3273
MaeIII GTNAC 6 cut(s) 30, 551, 751, 1289, 2773, 3025
MbiI CCGCTC 1 cut(s) 2010
MfeI CAATTG 1 cut(s) 914
MflI RGATCY 1 cut(s) 1705
MhlI GDGCHC 3 cut(s) 913, 2063, 2389
MlyI GAGTC 2 cut(s) 1887, 3014
MmeI TCCRAC 4 cut(s) 1599, 1880, 1945, 2698
Mph1103I ATGCAT 3 cut(s) 19, 733, 847
MroXI GAANNNNTTC 1 cut(s) 933
MslI CAYNNNNRTG 4 cut(s) 440, 558, 1673, 3520
MspA1I CMGCKG 2 cut(s) 521, 773
MspCI CTTAAG 2 cut(s) 221, 1442
MspR9I CCNGG 3 cut(s) 217, 870, 1106
MunI CAATTG 1 cut(s) 914
Mva1269I GAATGC 4 cut(s) 1040, 1067, 2515, 3734
MvaI CCWGG 3 cut(s) 217, 870, 1106
MwoI GCNNNNNNNGC 5 cut(s) 779, 1595, 1775, 2455, 2578
NdeI CATATG 3 cut(s) 838, 2224, 3679
NlaIV GGNNCC 4 cut(s) 447, 448, 510, 1311
NmuCI GTSAC 3 cut(s) 30, 551, 751
NsiI ATGCAT 3 cut(s) 19, 733, 847
NspI RCATGY 7 cut(s) 38, 296, 849, 1036, 1330, 2639, 3241
NspV TTCGAA 1 cut(s) 3332
OliI CACNNNNGTG 1 cut(s) 3520
PaeI GCATGC 1 cut(s) 849
PagI TCATGA 1 cut(s) 970
PaqCI CACCTGC 1 cut(s) 793
PciI ACATGT 4 cut(s) 34, 1032, 2635, 3237
PctI GAATGC 4 cut(s) 1040, 1067, 2515, 3734
PdmI GAANNNNTTC 1 cut(s) 933
PfeI GAWTC 7 cut(s) 482, 833, 881, 919, 974, 2332, 3247
PflMI CCANNNNNTGG 1 cut(s) 1270
PkrI GCNGC 5 cut(s) 298, 775, 826, 1597, 3456
PleI GAGTC 2 cut(s) 1886, 3013
PpsI GAGTC 2 cut(s) 1886, 3013
Ppu21I YACGTR 1 cut(s) 659
PpuMI RGGWCCY 1 cut(s) 446
PscI ACATGT 4 cut(s) 34, 1032, 2635, 3237
PshBI ATTAAT 1 cut(s) 2906
PsiI TTATAA 1 cut(s) 2784
Psp5II RGGWCCY 1 cut(s) 446
Psp6I CCWGG 3 cut(s) 215, 868, 1104
PspGI CCWGG 3 cut(s) 215, 868, 1104
PspN4I GGNNCC 4 cut(s) 447, 448, 510, 1311
PspPI GGNCC 3 cut(s) 446, 1145, 1738
PspPPI RGGWCCY 1 cut(s) 446
PsuI RGATCY 1 cut(s) 1705
PvuII CAGCTG 2 cut(s) 521, 773
RsaI GTAC 5 cut(s) 414, 423, 1755, 1801, 2767
RsaNI GTAC 5 cut(s) 413, 422, 1754, 1800, 2766
RseI CAYNNNNRTG 4 cut(s) 440, 558, 1673, 3520
SatI GCNGC 5 cut(s) 297, 774, 825, 1596, 3455
Sau96I GGNCC 3 cut(s) 446, 1145, 1738
SchI GAGTC 2 cut(s) 1887, 3014
ScrFI CCNGG 3 cut(s) 217, 870, 1106
SduI GDGCHC 3 cut(s) 913, 2063, 2389
SfcI CTRYAG 3 cut(s) 321, 1590, 2769
SfuI TTCGAA 1 cut(s) 3332
SinI GGWCC 3 cut(s) 446, 1145, 1738
SmiMI CAYNNNNRTG 4 cut(s) 440, 558, 1673, 3520
SmlI CTYRAG 2 cut(s) 221, 1442
SmoI CTYRAG 2 cut(s) 221, 1442
SphI GCATGC 1 cut(s) 849
SsiI CCGC 5 cut(s) 1350, 1595, 2008, 2329, 3455
SspI AATATT 1 cut(s) 2927
SspMI CTAG 8 cut(s) 24, 150, 263, 1433, 1803, 1808, 2496, 3413
StyD4I CCNGG 3 cut(s) 215, 868, 1104
StyI CCWWGG 3 cut(s) 2474, 2533, 3412
TaaI ACNGT 6 cut(s) 108, 568, 598, 2779, 2826, 3522
TaiI ACGT 5 cut(s) 164, 661, 2618, 3166, 3276
TatI WGTACW 3 cut(s) 412, 1799, 2765
TauI GCSGC 2 cut(s) 1598, 3457
TfiI GAWTC 7 cut(s) 482, 833, 881, 919, 974, 2332, 3247
TscAI CASTG 6 cut(s) 458, 1513, 2224, 2422, 3190, 3527
TseFI GTSAC 3 cut(s) 30, 551, 751
TseI GCWGC 3 cut(s) 296, 773, 824
Tsp45I GTSAC 3 cut(s) 30, 551, 751
TspGWI ACGGA 1 cut(s) 2240
TspRI CASTG 6 cut(s) 458, 1513, 2224, 2422, 3190, 3527
Van91I CCANNNNNTGG 1 cut(s) 1270
Vha464I CTTAAG 2 cut(s) 221, 1442
VpaK11BI GGWCC 3 cut(s) 446, 1145, 1738
VspI ATTAAT 1 cut(s) 2906
XapI RAATTY 8 cut(s) 155, 465, 1117, 1583, 2135, 2626, 3297, 3328
XceI RCATGY 7 cut(s) 38, 296, 849, 1036, 1330, 2639, 3241
XcmI CCANNNNNNNNNTGG 2 cut(s) 1961, 2263
XmaJI CCTAGG 1 cut(s) 3412
XmiI GTMKAC 3 cut(s) 50, 862, 2821
XmnI GAANNNNTTC 1 cut(s) 933
XspI CTAG 8 cut(s) 24, 150, 263, 1433, 1803, 1808, 2496, 3413
Zsp2I ATGCAT 3 cut(s) 19, 733, 847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.