pycom05g22610

aspartic-type endopeptidase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
24871373 .. 24879304
7932 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g22610.26

Sequence Viewer

Length: 5874 bp
ATGAACCTAAAGTTCATAATTATTTTGAAACCCGAAGTTTCTTATAAACATGCCTTGTTTGAAAACCTGAAGTTTTCACTTAAAAACATCACCCATGAAAACTCAAAGTTTTTCATTGATTTTTTCTCCATTACACTAACCACATCTTTCGACTTCACCGCTTTGGAGGTCTCTGGAAGGAACTACCTTAAGTGGGTTCAAGATGTGAAGCTCCACCTCACTGCAAAGAACTTGCGTCCTGCTATTGAAGAAGCAACAGACGAGCCTGTTGGTGAAGTTGAAAAAGCCACCACTATAATCTTCATTCGAAGACATATTCATGACGCTCTGCAAACTGAATATCTTGCTAAGGAGGATCCACGTGCATTATGGGTCACTTTGGCTAATCACTCTAATCACCAAAATGACATATTCTTGCATGAAGTAAGACACGACTGGCAGCACTTACGCTTCCAAGACTTTAAGTATGTGAATGAATATAATTATGAAGTTTGTCAAATCCGATCACTTCTCAAGTTTTGCAATGAAACTTTGACTGAAGAAGACCTATTCGACCTTCTTTTCTCGGATTTGATCTCTAATCATCAACCTCGAACAGGGGCGACTGTTGTGCCTGAAGCACATTATAACACAAACCAACGCCCAAAACGCCAAAAGAGGCGTGGTATGGGCGGTCAGAAGTCATCCCACCAAGGTCAACAGAGCCAAGGCCCATCTAAAGGAGGAAAAAAGCCCAGAAGCGCCCAAACCTCACTCCCAAAGCACGGAACTTCAAGAATAAGGGGTTTGAATTGCCAAGCTCGCAAGAAGGTTGTAGATGAATATCATTCTTGTCGTAAGAAGTTTAAATCAAACTTCATGCAAGTGGACAAATCGGAGACTACAAAGATAGAGAATCTTAGACATAGACTTATCTTTTGTTTTGAACAATTTTCCTTTATGTTTGGATTATTAGTTGGTGATTATACTTTGATTGATATTTGTTTTTACGAACTTTTATGCATTAGGAAAGTTAGTTGTCTGGCAGATAATGCAACCACGCACACTGTTTTGCGTGAACACATCTATTTCACTAACTTCATACCTAAGAATGCACCTCTGATAACCCTCTCATGCCCATCCAACCTGATGGAAAGATACGGTAATGCACTTATAATGTTGTTCAATGGTACAATCTTGACCATTAATAAGGCACTATATTTTCCGCGTTCCGGAAGAACGTTGCTAAGTTTCAAGGACATTAGAGATAAAAATTACCACACTGAAACCCACGTAGAAACGGAGTTGAATTTATATGGACGTAACCCGAGTGGTCTGTATACTACGACCATACGCCCCATTGAATTCCACTATGTGGCCGGCCCTACTACTGGGACCGCGCACGAAATTACACTTTGGCATGATCGTTTGGGACATCCTGGACGAATAATGATGCGCCGTATCCTTAAATCTTCACACGAGCATCCACTAACCCAAAGGGAAAACTTATCATTAAGCCTTCTTAGGACAAGATTCGTTCGAATCCTTCCATTTTTCTACAACAGATTCAGGGGGACATTTGTGGACCGATTCACCCTCCCTGGGAACCATTTAGATACTTTATGGTTTTGGTTGACACTTCCACACGTTGGTCACACGTGTGCTTGTTGTCCACAAGGAACGCTGCATTCTCCAAACTGTTGGCTTAGGTTATCAAGCTCAGGAATGTTGGAGAATTCACATCTAAAACTTTTGATGACTATTGCATGTCAGTTGAGGTTGAAGTTGAACATCCAATACCCTATGTTCACACCCAGAAGGCGATCATTGGTCATACGTACCAAGCTCCCGATTGCTGCTTGGGGCCATGCAATATTGCACGCAACAAAGTTGGTCTTTAGTTTCCGGATACGAACCCGACATATCGCATCTGCGCGTTTTTTATTGTGCGGTATATATGCCGATCTCGTTGTCCTTACCTACAAAAATGGGGCCTCAGCGAAGATGGGAATCTGTGTCGGATATGATTCTCTTTCGATTATTCGTTACTTAGAACCTTTGACAAGCGATCTGTTTACCGCTCGTTTCACGAATTGTCACTTCTATGAGACAGTCTTCCCATCGTTAAAGGGAGATAAAAACGTTATCATTCTTGAAGAACGACACGAATTATCGTGGACGACTCCCACTTTGTCTCATTTAGATCTCTGCACTGCTCAGTCTGAAACTGAAATACAACGCATATTAGATCTCCAAGGCATAGCTCAGAGCATGCCAGATGATTTCACCAATCTAGCGCACGTGACAAGATCACATATTCCAGCTGCTAATACACCTGTAAGGATGGATGTACCAAATGTACAACGGATTGCCCTCCTGGAAGCCCGGGACATCAATCTTGGTGATCCACGTACATTAACAACTAGCCAATCCTCTGCCCTACATAAAAGCGTGGCAGACCCCTTGGTTCAAAGGATTCACACCACTAGAAAAGGAAAATCACGGCACAAGACGAATTCTCCTCCCGAGATTCGTGAGATCTTGGTCTATTATGCTAGCTTAGATGATGTGTGGTGTAGAAATGAGATGATTGTCGACAATGCATTAACATTTGCAGTAGCTACTAAGATCATGTTGAGCAATGACATTGAATCGTGTTCCGTTGATGAATGTCGACGTAGAACTGATTGGTCAAACTGGAAACAAGCAATCCAAGTCAAAGTCGATTCGCTTACGAAACGTAAGGTGTTTGGACCTATAGCTCCTACTCCTCTACATGTGAAGCCCGTTGGCTACAAGTGGGTTTTCGTTCGGAAGCGTAATGAGAATAATGAAATTGTGTGTCACAAAGCTCGTCTTGTTGCACAAGGCTTCTCACAATGCCCCGGGATTGACTATGACAAAACTTATTCACCCGTTATGGATGTGATTACTTTTCGCTACCTTATCAGTTTGGTAGTTTCCAAAAAACTGGATATGCAGCTGATGGACGTAGTAACCGTGTATCTCTATGGGGATCTTGATACGGAAATTTATATGAAAGTTCCCGAAGGACTTACATTAACTAGTTCAAATATTTCCAAACCTCGAAACACGCTCTCAATTCGGCTGAGGTGTTCACTCTACGGTTTGAAACAATCTGGAAGAATGTGGTATAATCGTTTGAGTGAGTATTTGACTAGTCAGGGATATGTGAACAACGAACTATACCCTTATGTGTTCATTAAGAAGTCACATTCTGGATTTGCGATTGTTGCAGTATATGTTGATGACATAAATCTTATCGAAACTCTTGAAAAGCTCGCGAGAACTGTCGCACACCTGAAGTCGGAATTTGAGATGAAAGATCTAGGTAAGACTCAATACTGTCTCGATCTCGAGATAGACGAAGCCTTCAAGTACTCCTATAATCGTTTGATCACTAGATGCAAAACGATCGATCCCTTCTGTCCGAATGAGGATGATGAAGAGATTTTGGAGCCTGAAGTTCCTTATCTAAGTGCGATAGGCGCTTTATTGTACTTAGCTCAATGCATTATACCTGACATCTCCTTCACTGTTAATCTTTTGGCAAGATACAATAATGCACCTACACGTAGACACTGGACTGGCGTGAAAGACATCTTTGGTTACCTTAAAGGTACTGCGGATTTAGGTTTATTCAATTCCTATAAATCCTCAAATGATGCCGCACCATTTGCTTCTCGAGTCGATTCTCGCCTTGTTGGTTATGCCGACGCAAGATACTTATCTGATCAGTACAAGGCGCGCTTTCAAACGAGTTATGTCTTTACCGTTGGAGGAATCGTAATCTCTTGGAGGTTAACTAAACATACCTCATTTGCCACTTCATCTAACCATGCTGAAATTATCGCCTTACATGAAGCAACTCGGGAATGCTTTTGGTTGAGAGTAGTAGTGGACCATATTCAAAGCTTATACGATCTTTATCCTGCCGTTAATGGCTCGATGATGATTTTTGAAGACAACGCAGCTTGCATCGAACAGCTCAAGAAGGATTACATCAAAGGAGACAACACCAAGCATATTGCGCCGAAGTTTTTCTTTACACTTCAACAACAAGAGCATCAGAAAATTGAAGTCATGCAATTCCGTTCGCAAGACAATCTAGCCGATCTCTTCACCAAATCACTGCCGAAGACAACGTTTCAGAAGCTTTTCTCTTTTGGAACTGTGTCAAACTCAGGGGGAGTATCCTGTAAATACTTGATCGATCTTAATGTACTCTTTTTTCCTACGATTAGGAGCACCTACCTTGGGTTGGTCATATCCCTGAATGACTTTTCCTTAGAATATGGATTTTGTCCCTCCTCGGATTTTTGTCATAGCCTTAGGAAGTGTTGTTCCTTGGAATCAGTGCCAATGAGTCGACTTCCTCAACTTCTACATGATGTTAAATCTACCTTAAGTATTTACACACTCAAGGGGGAGTGTTTAGATTTGATTCTAGTTATCATTTCCTATTGTATCTTAACAACACACACATTCCCCTACAATTCCACAAACACATCTCTCTCTCTCTCTTCTCCTTGCCGCCGGCCCTCTCTCTTTTTGTCAGATAAAATAGACCACAACATAACTTTATTTTTAATCACCTCATATATATATTTATGTAAGAACTGTGCCACAAACCAACATTGTCAACTATGTGTAAAATATAATGCCAACCAAACCAAAGTAACAATTATACAAAACTTCTGGATAGAGAAAAAAGAGCGCAGTACATACAACAATTATAATATAAAGGCAAATGCTATCACAAATTTAGACTTTTCTCTAAGTTTCTTTTTTGTATCTCTTTCTTCACTTATAACACGTGAATTGGTTTATAATTTAATTAAGAGCACCATGTTCAAGGTGACCAAAGAAATACAATGTATAACCAGCTTGATCAATGTCTTGTGTTTGAAGATCAATGAATATGCATTGCACAGTTTAACTATTAGTTTTCAGTCAATTAGGGGAGGAGGAGGAGGAGGGGGGTCGATTGTTTTTGTTTTCACTTTTCAAGGTTTCAAAGTTTTCCACTGGCATCCAATTATATTGAAGAACTTAATTAACCTAATTAATACGTGTACTGGTTTAGTGCCTAGCAAGATACATGGTGGCGTTCATGTACTGGTTATTTTTTGCTGCTGGGTCTTATCAGTTTTGATTCAACGAACAGAAATTATTAAGGGGTGTGTGAGAAGTAAAATGAGATGTGTGAATAACACACCCTTGATTGATACATTTTCTTGCCTACTGACTGTTTTGTCATGCTCTTTTTTTTGGACAAGTTTTGTCATGCTTTTATGCTACTATCACATTTTAACTATAATATATATTTTTTTCATTATTCACTTTAATAATGGGCAACACGGTTCTTACTTAAAACTTTACTTGAAAAATAAAATGTTGGAAGAGTTCAGGTGTATGAGAATTGTGTCATTATTTCTTTGCTTTGTAGCTTTATTTATGCTAATCGTGATGAATTTTCTTAAAATTGCTGCACTAATCCTCAGGAAATATTGTTTTTACGGATCGCATAAATCTGTCTCGGGAAAGGGCCTGTATGGCATGCACGATGCTCCTACATACCCTCTCGTTAAGAGTCAATACATACATACATACATATATATATATATATATAGCCCCTACACAATATTGGTCGGTTGGCTCGGACTTGGAATACTCCCATTTGAATTTGGTACTACTATATATATGTATGCAGCTGGCCTACCCCAAGGCATGTGGAGGAGATTACAATATATGCACTCGAACATTAATGCACCCACAAATATATGTAATGAGCTCATTCCACCGCTTTTAAATAATGTATTTTTTTGTGGAAATTTTATAATCGAAATCATTCAATTTCTTGATTTTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1958

Amino Acids

224.95

Weight (kDa)

9.05

Isoelectric Point (pI)

40.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000161)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g36192 FvH4_3g41702 FvH4_4g13933 FvH4_6g39331 FvH4_6g44542
malus_domestica MD17G1101700.v1.1
pyrus_communis pycom01g01810 pycom01g03340 pycom05g22610 pycom13g03220 pycom13g23770 pycom13g26870 pycom17g17400 pycom17g17410 pycom17g17890
rosa_chinensis RchiOBHm_Chr2g0129881 RchiOBHm_Chr2g0163801 RchiOBHm_Chr4g0392871 RchiOBHm_Chr7g0218471
rosa_multiflora Rmu_co8005914.1_g000001 Rmu_co8214666.1_g000002 Rmu_co8253889.1_g000001 Rmu_co8429419.1_g000001 Rmu_sc0000031.1_g000049 Rmu_sc0000091.1_g000004 Rmu_sc0000103.1_g000050 Rmu_sc0000147.1_g000047 Rmu_sc0000185.1_g000026 Rmu_sc0000235.1_g000056 Rmu_sc0000247.1_g000002 Rmu_sc0000310.1_g000010 Rmu_sc0000353.1_g000034 Rmu_sc0000353.1_g000035 Rmu_sc0000367.1_g000046 Rmu_sc0000420.1_g000034 Rmu_sc0000461.1_g000022 Rmu_sc0000544.1_g000007 Rmu_sc0000544.1_g000009 Rmu_sc0000607.1_g000032 Rmu_sc0000647.1_g000011 Rmu_sc0000675.1_g000049 Rmu_sc0000680.1_g000015 Rmu_sc0000795.1_g000112 Rmu_sc0000851.1_g000013 Rmu_sc0000868.1_g000019 Rmu_sc0000869.1_g000009 Rmu_sc0000898.1_g000061 Rmu_sc0000990.1_g000006 Rmu_sc0001009.1_g000006 Rmu_sc0001051.1_g000034 Rmu_sc0001067.1_g000005 Rmu_sc0001124.1_g000020 Rmu_sc0001142.1_g000016 Rmu_sc0001231.1_g000015 Rmu_sc0001235.1_g000013 Rmu_sc0001336.1_g000036 Rmu_sc0001552.1_g000033 Rmu_sc0001604.1_g000003 Rmu_sc0001605.1_g000009 Rmu_sc0001605.1_g000011 Rmu_sc0001668.1_g000025 Rmu_sc0001698.1_g000009 Rmu_sc0001721.1_g000010 Rmu_sc0001735.1_g000004 Rmu_sc0001832.1_g000017 Rmu_sc0001844.1_g000024 Rmu_sc0001880.1_g000026 Rmu_sc0001896.1_g000018 Rmu_sc0001918.1_g000011 Rmu_sc0002072.1_g000022 Rmu_sc0002109.1_g000003 Rmu_sc0002142.1_g000017 Rmu_sc0002166.1_g000001 Rmu_sc0002207.1_g000015 Rmu_sc0002346.1_g000001 Rmu_sc0002460.1_g000009 Rmu_sc0002460.1_g000043 Rmu_sc0002460.1_g000071 Rmu_sc0002672.1_g000001 Rmu_sc0002699.1_g000019 Rmu_sc0002736.1_g000007 Rmu_sc0002773.1_g000003 Rmu_sc0002893.1_g000006 Rmu_sc0002968.1_g000014 Rmu_sc0002968.1_g000015 Rmu_sc0003032.1_g000020 Rmu_sc0003044.1_g000024 Rmu_sc0003200.1_g000007 Rmu_sc0003261.1_g000031 Rmu_sc0003347.1_g000014 Rmu_sc0003385.1_g000019 Rmu_sc0003385.1_g000020 Rmu_sc0003419.1_g000017 Rmu_sc0003605.1_g000029 Rmu_sc0003679.1_g000010 Rmu_sc0003708.1_g000002 Rmu_sc0003737.1_g000033 Rmu_sc0003981.1_g000021 Rmu_sc0004101.1_g000009 Rmu_sc0004119.1_g000009 Rmu_sc0004248.1_g000021 Rmu_sc0004362.1_g000013 Rmu_sc0004520.1_g000020 Rmu_sc0004741.1_g000017 Rmu_sc0004771.1_g000007 Rmu_sc0004835.1_g000027 Rmu_sc0004969.1_g000010 Rmu_sc0005037.1_g000002 Rmu_sc0005272.1_g000006 Rmu_sc0005584.1_g000017 Rmu_sc0005652.1_g000005 Rmu_sc0005670.1_g000010 Rmu_sc0005781.1_g000035 Rmu_sc0005816.1_g000026 Rmu_sc0005852.1_g000003 Rmu_sc0006087.1_g000008 Rmu_sc0006152.1_g000005 Rmu_sc0006160.1_g000001 Rmu_sc0006313.1_g000014 Rmu_sc0006347.1_g000001 Rmu_sc0006583.1_g000024 Rmu_sc0006711.1_g000018 Rmu_sc0006952.1_g000003 Rmu_sc0006976.1_g000006 Rmu_sc0007115.1_g000006 Rmu_sc0007490.1_g000028 Rmu_sc0007740.1_g000003 Rmu_sc0007779.1_g000001 Rmu_sc0007907.1_g000003 Rmu_sc0007967.1_g000003 Rmu_sc0008456.1_g000006 Rmu_sc0008578.1_g000003 Rmu_sc0008642.1_g000001 Rmu_sc0008848.1_g000001 Rmu_sc0010065.1_g000009 Rmu_sc0010263.1_g000003 Rmu_sc0010632.1_g000004 Rmu_sc0011050.1_g000004 Rmu_sc0011563.1_g000005 Rmu_sc0011854.1_g000001 Rmu_sc0012216.1_g000003 Rmu_sc0012689.1_g000002 Rmu_sc0012945.1_g000001 Rmu_sc0013071.1_g000003 Rmu_sc0013305.1_g000008 Rmu_sc0013698.1_g000009 Rmu_sc0013772.1_g000007 Rmu_sc0013874.1_g000001 Rmu_sc0014217.1_g000001 Rmu_sc0014478.1_g000019 Rmu_sc0014724.1_g000002 Rmu_sc0016563.1_g000002 Rmu_sc0016563.1_g000003 Rmu_sc0017108.1_g000001 Rmu_sc0017408.1_g000002 Rmu_sc0020248.1_g000001 Rmu_sc0021416.1_g000005 Rmu_sc0022221.1_g000003 Rmu_sc0022402.1_g000002 Rmu_sc0023172.1_g000001 Rmu_sc0024783.1_g000001 Rmu_sc0028152.1_g000001 Rmu_sc0028541.1_g000001 Rmu_sc0029935.1_g000001 Rmu_sc0030041.1_g000001 Rmu_sc0035924.1_g000001 Rmu_sc0038113.1_g000002 Rmu_sc0040377.1_g000001 Rmu_ssc0000041.1_g000024 Rmu_ssc0000197.1_g000066 Rmu_ssc0000213.1_g000082 Rmu_ssc0000215.1_g000018
rosa_roxburghii Rroxscaffold_152G00434500 Rroxscaffold_3G00223490 Rroxscaffold_3G00226440 Rroxscaffold_3G00237960 Rroxscaffold_6G00394150
rosa_samantha Rh5CG379600 Rh5CG449200 Rh6DG448500
rosa_wichuraiana Rw0G004320 Rw1G010800 Rw2G031280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 7 cut(s) 45, 627, 1154, 4737, 4811, 4830, 5840
AasI GACNNNNNNGTC 1 cut(s) 5254
AccB7I CCANNNNNTGG 2 cut(s) 1354, 1628
AccBSI CCGCTC 1 cut(s) 2060
AccI GTMKAC 5 cut(s) 1319, 2574, 2653, 3577, 4369
AccII CGCG 5 cut(s) 1207, 1379, 1915, 3284, 3748
AccIII TCCGGA 2 cut(s) 1211, 1884
AclI AACGTT 3 cut(s) 1220, 2121, 4145
AclWI GGATC 6 cut(s) 350, 363, 2378, 3003, 3413, 5530
AcoI YGGCCR 1 cut(s) 1356
AcuI CTGAAG 5 cut(s) 89, 558, 636, 3323, 3483
AcvI CACGTG 4 cut(s) 362, 1638, 2281, 4817
AdeI CACNNNGTG 1 cut(s) 1354
AflII CTTAAG 2 cut(s) 188, 4405
AflIII ACRYGT 7 cut(s) 1624, 1635, 1637, 2755, 3572, 4814, 5072
AhlI ACTAGT 2 cut(s) 3044, 3158
AjnI CCWGG 3 cut(s) 1417, 1579, 2355
AleI CACNNNNGTG 1 cut(s) 1638
AloI GAACNNNNNNTCC 2 cut(s) 4327, 4359
Alw21I GWGCWC 3 cut(s) 4250, 4847, 5796
Alw26I GTCTC 7 cut(s) 175, 872, 2081, 2178, 3353, 4005, 5542
AlwI GGATC 6 cut(s) 350, 363, 2378, 3003, 3413, 5530
Ama87I CYCGRG 8 cut(s) 1306, 2364, 2504, 2864, 3356, 3684, 3870, 5539
Aor13HI TCCGGA 2 cut(s) 1211, 1884
AoxI GGCC 8 cut(s) 709, 1356, 1360, 1843, 1971, 4538, 5548, 5716
ApeKI GCWGC 9 cut(s) 439, 1663, 1835, 2303, 2959, 3971, 5133, 5489, 5711
ArsI GACNNNNNNTTYG 4 cut(s) 900, 932, 2152, 2184
AseI ATTAAT 3 cut(s) 1185, 5067, 5766
Asp700I GAANNNNTTC 3 cut(s) 4040, 4157, 5850
AsuC2I CCSGG 4 cut(s) 2365, 2366, 2865, 2866
AsuII TTCGAA 2 cut(s) 307, 1519
AsuNHI GCTAGC 1 cut(s) 2534
AvaI CYCGRG 8 cut(s) 1306, 2364, 2504, 2864, 3356, 3684, 3870, 5539
AvaII GGWCC 4 cut(s) 1374, 1564, 2732, 3901
AxyI CCTNAGG 2 cut(s) 4331, 5501
BamHI GGATCC 1 cut(s) 355
BanII GRGCYC 1 cut(s) 5796
BauI CACGAG 1 cut(s) 1457
BbrPI CACGTG 4 cut(s) 362, 1638, 2281, 4817
BbsI GAAGAC 5 cut(s) 316, 549, 2086, 3969, 4145
Bbv12I GWGCWC 3 cut(s) 4250, 4847, 5796
BbvCI CCTCAGC 2 cut(s) 1975, 3089
BbvI GCAGC 9 cut(s) 451, 1650, 1822, 2290, 2971, 3983, 5120, 5476, 5723
BccI CCATC 7 cut(s) 721, 1123, 1126, 1978, 2107, 2317, 2959
BceAI ACGGC 3 cut(s) 1422, 2498, 3920
BcgI CGANNNNNNTGC 4 cut(s) 592, 626, 3397, 3431
BciT130I CCWGG 3 cut(s) 1419, 1581, 2357
BciVI GTATCC 3 cut(s) 1451, 1881, 4204
BclI TGATCA 3 cut(s) 3396, 3733, 4890
BcnI CCSGG 4 cut(s) 2365, 2366, 2865, 2866
BcoDI GTCTC 7 cut(s) 175, 872, 2081, 2178, 3353, 4005, 5542
BcuI ACTAGT 2 cut(s) 3044, 3158
BfmI CTRYAG 1 cut(s) 2736
BfoI RGCGCY 2 cut(s) 744, 3492
BfrI CTTAAG 2 cut(s) 188, 4405
BfuI GTATCC 3 cut(s) 1451, 1881, 4204
BglI GCCNNNNNGGC 1 cut(s) 5556
BglII AGATCT 4 cut(s) 2182, 2227, 2517, 3325
BmcAI AGTACT 1 cut(s) 3380
Bme1390I CCNGG 7 cut(s) 1419, 1581, 2357, 2365, 2366, 2865, 2866
Bme18I GGWCC 4 cut(s) 1374, 1564, 2732, 3901
BmeT110I CYCGRG 8 cut(s) 1306, 2364, 2504, 2864, 3356, 3684, 3870, 5539
BmiI GGNNCC 6 cut(s) 357, 1375, 1586, 1844, 1972, 3459
BmrFI CCNGG 7 cut(s) 1419, 1581, 2357, 2365, 2366, 2865, 2866
BmrI ACTGGG 1 cut(s) 1380
BmsI GCATC 9 cut(s) 1422, 1471, 1916, 3395, 3655, 3987, 4075, 5041, 5557
BmtI GCTAGC 1 cut(s) 2538
BmuI ACTGGG 1 cut(s) 1380
BpiI GAAGAC 5 cut(s) 316, 549, 2086, 3969, 4145
Bpu10I CCTNAGC 5 cut(s) 348, 1685, 1699, 1975, 3089
Bpu14I TTCGAA 2 cut(s) 307, 1519
BpuEI CTTGAG 3 cut(s) 497, 3974, 4406
BpuMI CCSGG 4 cut(s) 2365, 2366, 2865, 2866
Bsa29I ATCGAT 2 cut(s) 3417, 4212
BsaAI YACGTR 9 cut(s) 362, 1273, 1638, 1817, 2281, 2390, 3575, 4817, 5073
BsaBI GATNNNNATC 4 cut(s) 822, 1988, 3727, 3927
BsaI GGTCTC 1 cut(s) 175
BsaWI WCCGGW 2 cut(s) 1211, 1884
BsaXI ACNNNNNCTCC 4 cut(s) 2482, 2512, 3771, 3801
Bse118I RCCGGY 2 cut(s) 1358, 4536
Bse1I ACTGG 9 cut(s) 440, 1375, 2681, 2955, 3587, 3592, 5033, 5083, 5124
Bse21I CCTNAGG 2 cut(s) 4331, 5501
Bse3DI GCAATG 3 cut(s) 529, 2626, 4925
Bse8I GATNNNNATC 4 cut(s) 822, 1988, 3727, 3927
BseAI TCCGGA 2 cut(s) 1211, 1884
BseBI CCWGG 3 cut(s) 1419, 1581, 2357
BseCI ATCGAT 2 cut(s) 3417, 4212
BseJI GATNNNNATC 4 cut(s) 822, 1988, 3727, 3927
BseMI GCAATG 3 cut(s) 529, 2626, 4925
BseMII CTCAG 7 cut(s) 1713, 1989, 2210, 2258, 3080, 4197, 5515
BseNI ACTGG 9 cut(s) 440, 1375, 2681, 2955, 3587, 3592, 5033, 5083, 5124
BsePI GCGCGC 1 cut(s) 3746
BseRI GAGGAG 8 cut(s) 2490, 2739, 4300, 4980, 4983, 4986, 4989, 5752
BseXI GCAGC 9 cut(s) 451, 1650, 1822, 2290, 2971, 3983, 5120, 5476, 5723
BseYI CCCAGC 1 cut(s) 5136
BsgI GTGCAG 2 cut(s) 2173, 5475
Bsh1236I CGCG 5 cut(s) 1207, 1379, 1915, 3284, 3748
Bsh1285I CGRYCG 1 cut(s) 3417
BshFI GGCC 8 cut(s) 711, 1358, 1362, 1845, 1973, 4540, 5550, 5718
BshVI ATCGAT 2 cut(s) 3417, 4212
BsiEI CGRYCG 1 cut(s) 3417
BsiHKAI GWGCWC 3 cut(s) 4250, 4847, 5796
BsiHKCI CYCGRG 8 cut(s) 1306, 2364, 2504, 2864, 3356, 3684, 3870, 5539
BsiSI CCGG 6 cut(s) 1212, 1359, 1885, 2365, 2865, 4537
BslFI GGGAC 5 cut(s) 1387, 1425, 1567, 2381, 4290
BsmAI GTCTC 7 cut(s) 175, 872, 2081, 2178, 3353, 4005, 5542
BsmFI GGGAC 5 cut(s) 1387, 1425, 1567, 2381, 4290
BsmI GAATGC 3 cut(s) 1096, 1666, 3881
BsnI GGCC 8 cut(s) 711, 1358, 1362, 1845, 1973, 4540, 5550, 5718
Bso31I GGTCTC 1 cut(s) 175
BsoBI CYCGRG 8 cut(s) 1306, 2364, 2504, 2864, 3356, 3684, 3870, 5539
Bsp119I TTCGAA 2 cut(s) 307, 1519
Bsp1286I GDGCHC 3 cut(s) 4250, 4847, 5796
Bsp13I TCCGGA 2 cut(s) 1211, 1884
Bsp1407I TGTACA 1 cut(s) 2338
Bsp68I TCGCGA 1 cut(s) 3284
BspANI GGCC 8 cut(s) 711, 1358, 1362, 1845, 1973, 4540, 5550, 5718
BspCNI CTCAG 7 cut(s) 1712, 1988, 2209, 2257, 3081, 4196, 5514
BspDI ATCGAT 2 cut(s) 3417, 4212
BspEI TCCGGA 2 cut(s) 1211, 1884
BspFNI CGCG 5 cut(s) 1207, 1379, 1915, 3284, 3748
BspHI TCATGA 1 cut(s) 319
BspLI GGNNCC 6 cut(s) 357, 1375, 1586, 1844, 1972, 3459
BspOI GCTAGC 1 cut(s) 2538
BspPI GGATC 6 cut(s) 350, 363, 2378, 3003, 3413, 5530
BspT104I TTCGAA 2 cut(s) 307, 1519
BspTI CTTAAG 2 cut(s) 188, 4405
BspTNI GGTCTC 1 cut(s) 175
BsrBI CCGCTC 1 cut(s) 2060
BsrDI GCAATG 3 cut(s) 529, 2626, 4925
BsrFI RCCGGY 2 cut(s) 1358, 4536
BsrGI TGTACA 1 cut(s) 2338
BsrI ACTGG 9 cut(s) 440, 1375, 2681, 2955, 3587, 3592, 5033, 5083, 5124
BssAI RCCGGY 2 cut(s) 1358, 4536
BssHII GCGCGC 1 cut(s) 3746
BssNAI GTATAC 1 cut(s) 1320
BssSI CACGAG 1 cut(s) 1457
BssT1I CCWWGG 7 cut(s) 691, 706, 2233, 2442, 4255, 4347, 5725
Bst1107I GTATAC 1 cut(s) 1320
Bst2BI CACGAG 1 cut(s) 1457
Bst2UI CCWGG 3 cut(s) 1419, 1581, 2357
Bst6I CTCTTC 4 cut(s) 3441, 4124, 4528, 5397
BstAFI CTTAAG 2 cut(s) 188, 4405
BstAPI GCANNNNNTGC 2 cut(s) 1031, 3677
BstAUI TGTACA 1 cut(s) 2338
BstBAI YACGTR 9 cut(s) 362, 1273, 1638, 1817, 2281, 2390, 3575, 4817, 5073
BstBI TTCGAA 2 cut(s) 307, 1519
BstEII GGTNACC 2 cut(s) 3608, 4858
BstENI CCTNNNNNAGG 1 cut(s) 594
BstFNI CGCG 5 cut(s) 1207, 1379, 1915, 3284, 3748
BstH2I RGCGCY 2 cut(s) 744, 3492
BstMAI GTCTC 7 cut(s) 175, 872, 2081, 2178, 3353, 4005, 5542
BstMCI CGRYCG 1 cut(s) 3417
BstMWI GCNNNNNNNGC 8 cut(s) 648, 801, 1031, 3233, 3488, 3677, 4030, 5556
BstNI CCWGG 3 cut(s) 1419, 1581, 2357
BstNSI RCATGY 6 cut(s) 53, 1749, 2254, 2759, 5563, 5734
BstPI GGTNACC 2 cut(s) 3608, 4858
BstSCI CCNGG 7 cut(s) 1417, 1579, 2355, 2363, 2364, 2863, 2864
BstSFI CTRYAG 1 cut(s) 2736
BstSNI TACGTA 1 cut(s) 1817
BstUI CGCG 5 cut(s) 1207, 1379, 1915, 3284, 3748
BstV1I GCAGC 9 cut(s) 451, 1650, 1822, 2290, 2971, 3983, 5120, 5476, 5723
BstV2I GAAGAC 5 cut(s) 316, 549, 2086, 3969, 4145
BstX2I RGATCY 6 cut(s) 355, 2182, 2227, 2517, 2995, 3325
BstXI CCANNNNNNTGG 3 cut(s) 1129, 1680, 2950
BstYI RGATCY 6 cut(s) 355, 2182, 2227, 2517, 2995, 3325
BstZ17I GTATAC 1 cut(s) 1320
Bsu15I ATCGAT 2 cut(s) 3417, 4212
Bsu36I CCTNAGG 2 cut(s) 4331, 5501
BsuI GTATCC 3 cut(s) 1451, 1881, 4204
BsuRI GGCC 8 cut(s) 711, 1358, 1362, 1845, 1973, 4540, 5550, 5718
BsuTUI ATCGAT 2 cut(s) 3417, 4212
BtsI GCAGTG 3 cut(s) 219, 2190, 4130
BtsIMutI CAGTG 9 cut(s) 219, 1044, 1260, 2190, 3534, 3580, 4130, 4362, 5026
BtuMI TCGCGA 1 cut(s) 3284
CciI TCATGA 1 cut(s) 319
Cfr10I RCCGGY 2 cut(s) 1358, 4536
Cfr9I CCCGGG 2 cut(s) 2364, 2864
ClaI ATCGAT 2 cut(s) 3417, 4212
CseI GACGC 3 cut(s) 224, 332, 3725
CspCI CAANNNNNGTGG 2 cut(s) 5714, 5749
DraI TTTAAA 2 cut(s) 847, 5811
DraIII CACNNNGTG 1 cut(s) 1354
DrdI GACNNNNNNGTC 1 cut(s) 5254
DseDI GACNNNNNNGTC 1 cut(s) 5254
EaeI YGGCCR 1 cut(s) 1356
Eam1104I CTCTTC 4 cut(s) 3441, 4124, 4528, 5397
EarI CTCTTC 4 cut(s) 3441, 4124, 4528, 5397
Ecl136II GAGCTC 1 cut(s) 5794
Eco105I TACGTA 1 cut(s) 1817
Eco130I CCWWGG 7 cut(s) 691, 706, 2233, 2442, 4255, 4347, 5725
Eco24I GRGCYC 1 cut(s) 5796
Eco31I GGTCTC 1 cut(s) 175
Eco47I GGWCC 4 cut(s) 1374, 1564, 2732, 3901
Eco53kI GAGCTC 1 cut(s) 5794
Eco57I CTGAAG 5 cut(s) 89, 558, 636, 3323, 3483
Eco72I CACGTG 4 cut(s) 362, 1638, 2281, 4817
Eco81I CCTNAGG 2 cut(s) 4331, 5501
Eco88I CYCGRG 8 cut(s) 1306, 2364, 2504, 2864, 3356, 3684, 3870, 5539
Eco91I GGTNACC 2 cut(s) 3608, 4858
EcoICRI GAGCTC 1 cut(s) 5794
EcoNI CCTNNNNNAGG 1 cut(s) 594
EcoO109I RGGNCCY 2 cut(s) 1971, 5548
EcoO65I GGTNACC 2 cut(s) 3608, 4858
EcoRI GAATTC 3 cut(s) 1343, 1714, 2494
EcoRII CCWGG 3 cut(s) 1417, 1579, 2355
EcoT14I CCWWGG 7 cut(s) 691, 706, 2233, 2442, 4255, 4347, 5725
EcoT22I ATGCAT 4 cut(s) 1004, 2584, 3515, 4927
EcoT38I GRGCYC 1 cut(s) 5796
ErhI CCWWGG 7 cut(s) 691, 706, 2233, 2442, 4255, 4347, 5725
FalI AAGNNNNNCTT 8 cut(s) 1859, 1891, 2820, 2852, 3734, 3766, 4028, 4060
FaqI GGGAC 5 cut(s) 1387, 1425, 1567, 2381, 4290
FbaI TGATCA 3 cut(s) 3396, 3733, 4890
FblI GTMKAC 5 cut(s) 1319, 2574, 2653, 3577, 4369
FriOI GRGCYC 1 cut(s) 5796
FseI GGCCGGCC 1 cut(s) 1362
GsaI CCCAGC 1 cut(s) 5140
HaeII RGCGCY 2 cut(s) 744, 3492
HaeIII GGCC 8 cut(s) 711, 1358, 1362, 1845, 1973, 4540, 5550, 5718
HapII CCGG 6 cut(s) 1212, 1359, 1885, 2365, 2865, 4537
HgaI GACGC 3 cut(s) 224, 332, 3725
HincII GTYRAC 7 cut(s) 698, 1614, 2575, 2654, 3804, 4370, 4643
HindII GTYRAC 7 cut(s) 698, 1614, 2575, 2654, 3804, 4370, 4643
HindIII AAGCTT 2 cut(s) 3913, 4154
HpaI GTTAAC 1 cut(s) 3804
HpaII CCGG 6 cut(s) 1212, 1359, 1885, 2365, 2865, 4537
Hpy99I CGWCG 2 cut(s) 2658, 3719
HpyF10VI GCNNNNNNNGC 8 cut(s) 648, 801, 1031, 3233, 3488, 3677, 4030, 5556
Kpn2I TCCGGA 2 cut(s) 1211, 1884
KroI GCCGGC 2 cut(s) 1358, 4536
KroNI GCCGGC 2 cut(s) 1360, 4538
Ksp22I TGATCA 3 cut(s) 3396, 3733, 4890
KspAI GTTAAC 1 cut(s) 3804
LmnI GCTCC 6 cut(s) 216, 1830, 2746, 3457, 4245, 5575
Lsp1109I GCAGC 9 cut(s) 451, 1650, 1822, 2290, 2971, 3983, 5120, 5476, 5723
LweI GCATC 9 cut(s) 1422, 1471, 1916, 3395, 3655, 3987, 4075, 5041, 5557
MbiI CCGCTC 1 cut(s) 2060
MflI RGATCY 6 cut(s) 355, 2182, 2227, 2517, 2995, 3325
MhlI GDGCHC 3 cut(s) 4250, 4847, 5796
MlyI GAGTC 5 cut(s) 2155, 3331, 3696, 4375, 5602
MmeI TCCRAC 6 cut(s) 1146, 1689, 1978, 3288, 3757, 5379
Mph1103I ATGCAT 4 cut(s) 1004, 2584, 3515, 4927
MroI TCCGGA 2 cut(s) 1211, 1884
MroNI GCCGGC 2 cut(s) 1358, 4536
MroXI GAANNNNTTC 3 cut(s) 4040, 4157, 5850
MslI CAYNNNNRTG 5 cut(s) 318, 402, 863, 1638, 2082
MspA1I CMGCKG 3 cut(s) 2303, 2962, 5714
MspCI CTTAAG 2 cut(s) 188, 4405
MspI CCGG 6 cut(s) 1212, 1359, 1885, 2365, 2865, 4537
MspR9I CCNGG 7 cut(s) 1419, 1581, 2357, 2365, 2366, 2865, 2866
Mva1269I GAATGC 3 cut(s) 1096, 1666, 3881
MvaI CCWGG 3 cut(s) 1419, 1581, 2357
MvnI CGCG 5 cut(s) 1207, 1379, 1915, 3284, 3748
MwoI GCNNNNNNNGC 8 cut(s) 648, 801, 1031, 3233, 3488, 3677, 4030, 5556
NaeI GCCGGC 2 cut(s) 1360, 4538
NciI CCSGG 4 cut(s) 2365, 2366, 2865, 2866
NgoMIV GCCGGC 2 cut(s) 1358, 4536
NheI GCTAGC 1 cut(s) 2534
NlaIV GGNNCC 6 cut(s) 357, 1375, 1586, 1844, 1972, 3459
NmuCI GTSAC 7 cut(s) 373, 1631, 2075, 2281, 2822, 3210, 4858
NruI TCGCGA 1 cut(s) 3284
NsiI ATGCAT 4 cut(s) 1004, 2584, 3515, 4927
NspI RCATGY 6 cut(s) 53, 1749, 2254, 2759, 5563, 5734
NspV TTCGAA 2 cut(s) 307, 1519
OliI CACNNNNGTG 1 cut(s) 1638
PacI TTAATTAA 2 cut(s) 4839, 5058
PaeI GCATGC 2 cut(s) 2254, 5563
PaeR7I CTCGAG 2 cut(s) 3356, 3684
PagI TCATGA 1 cut(s) 319
PasI CCCWGGG 1 cut(s) 1580
PauI GCGCGC 1 cut(s) 3746
PciI ACATGT 1 cut(s) 2755
PcsI WCGNNNNNNNCGW 2 cut(s) 2976, 3363
PctI GAATGC 3 cut(s) 1096, 1666, 3881
PdiI GCCGGC 2 cut(s) 1360, 4538
PdmI GAANNNNTTC 3 cut(s) 4040, 4157, 5850
PflMI CCANNNNNTGG 2 cut(s) 1354, 1628
PfoI TCCNGGA 2 cut(s) 1417, 2355
Ple19I CGATCG 1 cut(s) 3417
PleI GAGTC 5 cut(s) 2155, 3331, 3695, 4374, 5601
PmaCI CACGTG 4 cut(s) 362, 1638, 2281, 4817
PmlI CACGTG 4 cut(s) 362, 1638, 2281, 4817
PpsI GAGTC 5 cut(s) 2155, 3331, 3695, 4374, 5601
Ppu21I YACGTR 9 cut(s) 362, 1273, 1638, 1817, 2281, 2390, 3575, 4817, 5073
PscI ACATGT 1 cut(s) 2755
PshBI ATTAAT 3 cut(s) 1185, 5067, 5766
PsiI TTATAA 7 cut(s) 45, 627, 1154, 4737, 4811, 4830, 5840
Psp124BI GAGCTC 1 cut(s) 5796
Psp1406I AACGTT 3 cut(s) 1220, 2121, 4145
Psp6I CCWGG 3 cut(s) 1417, 1579, 2355
PspCI CACGTG 4 cut(s) 362, 1638, 2281, 4817
PspEI GGTNACC 2 cut(s) 3608, 4858
PspFI CCCAGC 1 cut(s) 5136
PspGI CCWGG 3 cut(s) 1417, 1579, 2355
PspN4I GGNNCC 6 cut(s) 357, 1375, 1586, 1844, 1972, 3459
PsrI GAACNNNNNNTAC 2 cut(s) 1760, 1792
PsuI RGATCY 6 cut(s) 355, 2182, 2227, 2517, 2995, 3325
PteI GCGCGC 1 cut(s) 3746
PvuI CGATCG 1 cut(s) 3417
PvuII CAGCTG 3 cut(s) 2303, 2962, 5714
RigI GGCCGGCC 1 cut(s) 1362
RruI TCGCGA 1 cut(s) 3284
RseI CAYNNNNRTG 5 cut(s) 318, 402, 863, 1638, 2082
SacI GAGCTC 1 cut(s) 5796
SalI GTCGAC 3 cut(s) 2573, 2652, 4368
ScaI AGTACT 1 cut(s) 3380
SchI GAGTC 5 cut(s) 2155, 3331, 3696, 4375, 5602
ScrFI CCNGG 7 cut(s) 1419, 1581, 2357, 2365, 2366, 2865, 2866
SduI GDGCHC 3 cut(s) 4250, 4847, 5796
SfaNI GCATC 9 cut(s) 1422, 1471, 1916, 3395, 3655, 3987, 4075, 5041, 5557
SfcI CTRYAG 1 cut(s) 2736
Sfr274I CTCGAG 2 cut(s) 3356, 3684
SfuI TTCGAA 2 cut(s) 307, 1519
SinI GGWCC 4 cut(s) 1374, 1564, 2732, 3901
SlaI CTCGAG 2 cut(s) 3356, 3684
SmaI CCCGGG 2 cut(s) 2366, 2866
SmiMI CAYNNNNRTG 5 cut(s) 318, 402, 863, 1638, 2082
SmlI CTYRAG 7 cut(s) 188, 512, 3356, 3684, 3989, 4405, 4421
SmoI CTYRAG 7 cut(s) 188, 512, 3356, 3684, 3989, 4405, 4421
SnaBI TACGTA 1 cut(s) 1817
SpeI ACTAGT 2 cut(s) 3044, 3158
SphI GCATGC 2 cut(s) 2254, 5563
SspI AATATT 4 cut(s) 1854, 3055, 5510, 5646
SstI GAGCTC 1 cut(s) 5796
StyD4I CCNGG 7 cut(s) 1417, 1579, 2355, 2363, 2364, 2863, 2864
StyI CCWWGG 7 cut(s) 691, 706, 2233, 2442, 4255, 4347, 5725
TaqII GACCGA 1 cut(s) 1581
TatI WGTACW 8 cut(s) 2338, 3378, 3498, 3738, 4222, 4721, 5075, 5116
TauI GCSGC 2 cut(s) 3671, 4536
TscAI CASTG 9 cut(s) 226, 1051, 1267, 2197, 3541, 3587, 4137, 4362, 5033
TseFI GTSAC 7 cut(s) 373, 1631, 2075, 2281, 2822, 3210, 4858
TseI GCWGC 9 cut(s) 439, 1663, 1835, 2303, 2959, 3971, 5133, 5489, 5711
Tsp45I GTSAC 7 cut(s) 373, 1631, 2075, 2281, 2822, 3210, 4858
TspGWI ACGGA 7 cut(s) 780, 1295, 2359, 2629, 3020, 4082, 5535
TspMI CCCGGG 2 cut(s) 2364, 2864
TspRI CASTG 9 cut(s) 226, 1051, 1267, 2197, 3541, 3587, 4137, 4362, 5033
Van91I CCANNNNNTGG 2 cut(s) 1354, 1628
Vha464I CTTAAG 2 cut(s) 188, 4405
VpaK11BI GGWCC 4 cut(s) 1374, 1564, 2732, 3901
VspI ATTAAT 3 cut(s) 1185, 5067, 5766
XagI CCTNNNNNAGG 1 cut(s) 594
XceI RCATGY 6 cut(s) 53, 1749, 2254, 2759, 5563, 5734
XcmI CCANNNNNNNNNTGG 2 cut(s) 366, 659
XhoI CTCGAG 2 cut(s) 3356, 3684
XmaI CCCGGG 2 cut(s) 2364, 2864
XmiI GTMKAC 5 cut(s) 1319, 2574, 2653, 3577, 4369
XmnI GAANNNNTTC 3 cut(s) 4040, 4157, 5850
ZrmI AGTACT 1 cut(s) 3380
Zsp2I ATGCAT 4 cut(s) 1004, 2584, 3515, 4927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.