RchiOBHm_Chr4g0392871

aspartic-type endopeptidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000161
Physical Location & Seq
Reverse (-)
8348278 .. 8349940
1663 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36553

Sequence Viewer

Length: 1065 bp
ATGTGGGACACTGACTCATACAGGCTTTGGCATGACCGCCTAGGGCACCCTGGTCGTGACATGATGATCCGCATTTTAAAGAACTCACACGGACATCCCTTCTTTCGAGTGAAAAATAAAATGGGAGAAAAATCCGCCACACTGAAAGGTGTCGGTCCTCGTATTGCTCAAATGCAGCCATTACATTCTGAAGTACCAAAAGCACTACCTCCCTCCCATTATGCCTCATTGACTATTTCAAAGGCACATCACTCGTTTTGCAAAGCCTGCTCTTTAGCAAAAACAGGATCGAGACCTTCCTATGCTAAAGATACAAAACAAAACATTCCATTCTTACAAAGGATACAAGGAGACATATGTGGACCTATCCATCCAGAATGCGGACCATTCAAGTACTTTATGGTTCTGGTGGATGCCTCGACACGCTGGTCACATGTCGTTTTATTGTCCACAAGAAATACTGCATTTGCAAAACTCCTAGCACAGATTATACGCTTAAGGGCTCACCACCCTGATCACCCTATCAAGTCTATAAGGCTTGATAATGCTGGAGAGTTTACATCAAAAGCATTTGATGATTATTGCATGTCTATTGGGATCGATGTAGAGCATCCTGTACCCCATGTGCATACACAAAATGGTCTCGCAGAAGCCACCATCAAAAGGCTACAGATGGTGGCTAGGGCATTGGTTATGCGCACCAACTTGCCTATATCTGCATGGGGTTATGCAATATTGCACGCAGCTTTACTCATTCGTTTCAGACCCACTGCTAGCCAACCATTTTCTGCGTACCAGTTGGTAACTGGATATGAGCCTGACATTTCCCACTTACGCATATTTGGTTGCGCCGTATATGTGCCTATTGCGCCCCCACAGCGCACTAAAATGGGTCCTCAGAGACGATTAAGTATTTATGTTGGATACGAATCTCCAACGATTATCCGCTATTTGGAACCCTTGACAGGCGATCTCTTTACCGCTCGATTTGCGGATTGTCACTTTGATGAGACAGTCTTCCCGTCGTTAGGGGGAGATAGGAAAAAGGATTTTCCAAGGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 rve

Protein Analysis

354

Amino Acids

39.97

Weight (kDa)

9.63

Isoelectric Point (pI)

39.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
rve PF00665 113 - 204 1.3e-10 Integrase core domain
SH3_retrovirus PF25597 283 - 342 1e-05 Retroviral polymerase SH3-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000161)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g36192 FvH4_3g41702 FvH4_4g13933 FvH4_6g39331 FvH4_6g44542
malus_domestica MD17G1101700.v1.1
pyrus_communis pycom01g01810 pycom01g03340 pycom05g22610 pycom13g03220 pycom13g23770 pycom13g26870 pycom17g17400 pycom17g17410 pycom17g17890
rosa_chinensis RchiOBHm_Chr2g0129881 RchiOBHm_Chr2g0163801 RchiOBHm_Chr4g0392871 RchiOBHm_Chr7g0218471
rosa_multiflora Rmu_co8005914.1_g000001 Rmu_co8214666.1_g000002 Rmu_co8253889.1_g000001 Rmu_co8429419.1_g000001 Rmu_sc0000031.1_g000049 Rmu_sc0000091.1_g000004 Rmu_sc0000103.1_g000050 Rmu_sc0000147.1_g000047 Rmu_sc0000185.1_g000026 Rmu_sc0000235.1_g000056 Rmu_sc0000247.1_g000002 Rmu_sc0000310.1_g000010 Rmu_sc0000353.1_g000034 Rmu_sc0000353.1_g000035 Rmu_sc0000367.1_g000046 Rmu_sc0000420.1_g000034 Rmu_sc0000461.1_g000022 Rmu_sc0000544.1_g000007 Rmu_sc0000544.1_g000009 Rmu_sc0000607.1_g000032 Rmu_sc0000647.1_g000011 Rmu_sc0000675.1_g000049 Rmu_sc0000680.1_g000015 Rmu_sc0000795.1_g000112 Rmu_sc0000851.1_g000013 Rmu_sc0000868.1_g000019 Rmu_sc0000869.1_g000009 Rmu_sc0000898.1_g000061 Rmu_sc0000990.1_g000006 Rmu_sc0001009.1_g000006 Rmu_sc0001051.1_g000034 Rmu_sc0001067.1_g000005 Rmu_sc0001124.1_g000020 Rmu_sc0001142.1_g000016 Rmu_sc0001231.1_g000015 Rmu_sc0001235.1_g000013 Rmu_sc0001336.1_g000036 Rmu_sc0001552.1_g000033 Rmu_sc0001604.1_g000003 Rmu_sc0001605.1_g000009 Rmu_sc0001605.1_g000011 Rmu_sc0001668.1_g000025 Rmu_sc0001698.1_g000009 Rmu_sc0001721.1_g000010 Rmu_sc0001735.1_g000004 Rmu_sc0001832.1_g000017 Rmu_sc0001844.1_g000024 Rmu_sc0001880.1_g000026 Rmu_sc0001896.1_g000018 Rmu_sc0001918.1_g000011 Rmu_sc0002072.1_g000022 Rmu_sc0002109.1_g000003 Rmu_sc0002142.1_g000017 Rmu_sc0002166.1_g000001 Rmu_sc0002207.1_g000015 Rmu_sc0002346.1_g000001 Rmu_sc0002460.1_g000009 Rmu_sc0002460.1_g000043 Rmu_sc0002460.1_g000071 Rmu_sc0002672.1_g000001 Rmu_sc0002699.1_g000019 Rmu_sc0002736.1_g000007 Rmu_sc0002773.1_g000003 Rmu_sc0002893.1_g000006 Rmu_sc0002968.1_g000014 Rmu_sc0002968.1_g000015 Rmu_sc0003032.1_g000020 Rmu_sc0003044.1_g000024 Rmu_sc0003200.1_g000007 Rmu_sc0003261.1_g000031 Rmu_sc0003347.1_g000014 Rmu_sc0003385.1_g000019 Rmu_sc0003385.1_g000020 Rmu_sc0003419.1_g000017 Rmu_sc0003605.1_g000029 Rmu_sc0003679.1_g000010 Rmu_sc0003708.1_g000002 Rmu_sc0003737.1_g000033 Rmu_sc0003981.1_g000021 Rmu_sc0004101.1_g000009 Rmu_sc0004119.1_g000009 Rmu_sc0004248.1_g000021 Rmu_sc0004362.1_g000013 Rmu_sc0004520.1_g000020 Rmu_sc0004741.1_g000017 Rmu_sc0004771.1_g000007 Rmu_sc0004835.1_g000027 Rmu_sc0004969.1_g000010 Rmu_sc0005037.1_g000002 Rmu_sc0005272.1_g000006 Rmu_sc0005584.1_g000017 Rmu_sc0005652.1_g000005 Rmu_sc0005670.1_g000010 Rmu_sc0005781.1_g000035 Rmu_sc0005816.1_g000026 Rmu_sc0005852.1_g000003 Rmu_sc0006087.1_g000008 Rmu_sc0006152.1_g000005 Rmu_sc0006160.1_g000001 Rmu_sc0006313.1_g000014 Rmu_sc0006347.1_g000001 Rmu_sc0006583.1_g000024 Rmu_sc0006711.1_g000018 Rmu_sc0006952.1_g000003 Rmu_sc0006976.1_g000006 Rmu_sc0007115.1_g000006 Rmu_sc0007490.1_g000028 Rmu_sc0007740.1_g000003 Rmu_sc0007779.1_g000001 Rmu_sc0007907.1_g000003 Rmu_sc0007967.1_g000003 Rmu_sc0008456.1_g000006 Rmu_sc0008578.1_g000003 Rmu_sc0008642.1_g000001 Rmu_sc0008848.1_g000001 Rmu_sc0010065.1_g000009 Rmu_sc0010263.1_g000003 Rmu_sc0010632.1_g000004 Rmu_sc0011050.1_g000004 Rmu_sc0011563.1_g000005 Rmu_sc0011854.1_g000001 Rmu_sc0012216.1_g000003 Rmu_sc0012689.1_g000002 Rmu_sc0012945.1_g000001 Rmu_sc0013071.1_g000003 Rmu_sc0013305.1_g000008 Rmu_sc0013698.1_g000009 Rmu_sc0013772.1_g000007 Rmu_sc0013874.1_g000001 Rmu_sc0014217.1_g000001 Rmu_sc0014478.1_g000019 Rmu_sc0014724.1_g000002 Rmu_sc0016563.1_g000002 Rmu_sc0016563.1_g000003 Rmu_sc0017108.1_g000001 Rmu_sc0017408.1_g000002 Rmu_sc0020248.1_g000001 Rmu_sc0021416.1_g000005 Rmu_sc0022221.1_g000003 Rmu_sc0022402.1_g000002 Rmu_sc0023172.1_g000001 Rmu_sc0024783.1_g000001 Rmu_sc0028152.1_g000001 Rmu_sc0028541.1_g000001 Rmu_sc0029935.1_g000001 Rmu_sc0030041.1_g000001 Rmu_sc0035924.1_g000001 Rmu_sc0038113.1_g000002 Rmu_sc0040377.1_g000001 Rmu_ssc0000041.1_g000024 Rmu_ssc0000197.1_g000066 Rmu_ssc0000213.1_g000082 Rmu_ssc0000215.1_g000018
rosa_roxburghii Rroxscaffold_152G00434500 Rroxscaffold_3G00223490 Rroxscaffold_3G00226440 Rroxscaffold_3G00237960 Rroxscaffold_6G00394150
rosa_samantha Rh5CG379600 Rh5CG449200 Rh6DG448500
rosa_wichuraiana Rw0G004320 Rw1G010800 Rw2G031280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 427
Acc16I TGCGCA 1 cut(s) 698
AccB1I GGYRCC 1 cut(s) 45
AccBSI CCGCTC 1 cut(s) 983
AciI CCGC 7 cut(s) 37, 70, 135, 381, 946, 981, 992
AclWI GGATC 3 cut(s) 61, 295, 605
AcuI CTGAAG 1 cut(s) 210
AfaI GTAC 4 cut(s) 195, 395, 618, 794
AfiI CCNNNNNNNGG 5 cut(s) 380, 663, 952, 965, 1028
AflII CTTAAG 1 cut(s) 496
AflIII ACRYGT 1 cut(s) 433
AgsI TTSAA 2 cut(s) 240, 391
AjnI CCWGG 1 cut(s) 49
AluBI AGCT 1 cut(s) 746
AluI AGCT 1 cut(s) 746
Alw26I GTCTC 5 cut(s) 286, 345, 647, 895, 1004
AlwI GGATC 3 cut(s) 61, 295, 605
ApeKI GCWGC 2 cut(s) 175, 743
AspA2I CCTAGG 1 cut(s) 40
AspLEI GCGC 4 cut(s) 699, 851, 871, 882
AspS9I GGNCC 4 cut(s) 155, 362, 383, 893
AsuHPI GGTGA 2 cut(s) 497, 509
AsuNHI GCTAGC 1 cut(s) 773
AvaII GGWCC 4 cut(s) 155, 362, 383, 893
AvrII CCTAGG 1 cut(s) 40
BaeGI GKGCMC 1 cut(s) 48
BanI GGYRCC 1 cut(s) 45
BanII GRGCYC 1 cut(s) 505
BbsI GAAGAC 1 cut(s) 1009
BbvI GCAGC 2 cut(s) 187, 755
BccI CCATC 3 cut(s) 378, 665, 667
BceAI ACGGC 1 cut(s) 836
BcgI CGANNNNNNTGC 4 cut(s) 35, 69, 234, 268
BciT130I CCWGG 1 cut(s) 51
BciVI GTATCC 2 cut(s) 336, 917
BclI TGATCA 1 cut(s) 514
BcoDI GTCTC 5 cut(s) 286, 345, 647, 895, 1004
BfaI CTAG 4 cut(s) 41, 479, 681, 774
BfmI CTRYAG 1 cut(s) 668
BfrI CTTAAG 1 cut(s) 496
BfuI GTATCC 2 cut(s) 336, 917
BisI GCNGC 2 cut(s) 176, 744
BlnI CCTAGG 1 cut(s) 40
BlsI GCNGC 2 cut(s) 177, 745
BmcAI AGTACT 1 cut(s) 395
Bme1390I CCNGG 1 cut(s) 51
Bme18I GGWCC 4 cut(s) 155, 362, 383, 893
BmgT120I GGNCC 4 cut(s) 155, 362, 383, 893
BmiI GGNNCC 3 cut(s) 47, 894, 957
BmrFI CCNGG 1 cut(s) 51
BmsI GCATC 2 cut(s) 403, 619
BmtI GCTAGC 1 cut(s) 777
BpiI GAAGAC 1 cut(s) 1009
BpmI CTGGAG 1 cut(s) 570
Bsa29I ATCGAT 1 cut(s) 600
BsaBI GATNNNNATC 1 cut(s) 928
BsaI GGTCTC 2 cut(s) 286, 647
BsaJI CCNNGG 3 cut(s) 40, 49, 1055
Bsc4I CCNNNNNNNGG 5 cut(s) 380, 663, 952, 965, 1028
Bse1I ACTGG 2 cut(s) 796, 811
Bse8I GATNNNNATC 1 cut(s) 928
BseBI CCWGG 1 cut(s) 51
BseCI ATCGAT 1 cut(s) 600
BseDI CCNNGG 3 cut(s) 40, 49, 1055
BseGI GGATG 4 cut(s) 94, 370, 418, 610
BseJI GATNNNNATC 1 cut(s) 928
BseLI CCNNNNNNNGG 5 cut(s) 380, 663, 952, 965, 1028
BseMII CTCAG 1 cut(s) 911
BseNI ACTGG 2 cut(s) 796, 811
BseSI GKGCMC 1 cut(s) 48
BseXI GCAGC 2 cut(s) 187, 755
BshNI GGYRCC 1 cut(s) 45
BshVI ATCGAT 1 cut(s) 600
BslFI GGGAC 1 cut(s) 20
BslI CCNNNNNNNGG 5 cut(s) 380, 663, 952, 965, 1028
BsmAI GTCTC 5 cut(s) 286, 345, 647, 895, 1004
BsmBI CGTCTC 1 cut(s) 895
BsmFI GGGAC 1 cut(s) 20
BsmI GAATGC 1 cut(s) 383
Bso31I GGTCTC 2 cut(s) 286, 647
Bsp1286I GDGCHC 2 cut(s) 48, 505
Bsp143I GATC 5 cut(s) 66, 287, 514, 597, 970
BspACI CCGC 7 cut(s) 37, 70, 135, 381, 946, 981, 992
BspCNI CTCAG 1 cut(s) 910
BspDI ATCGAT 1 cut(s) 600
BspLI GGNNCC 3 cut(s) 47, 894, 957
BspOI GCTAGC 1 cut(s) 777
BspPI GGATC 3 cut(s) 61, 295, 605
BspT107I GGYRCC 1 cut(s) 45
BspTI CTTAAG 1 cut(s) 496
BspTNI GGTCTC 2 cut(s) 286, 647
BsrBI CCGCTC 1 cut(s) 983
BsrI ACTGG 2 cut(s) 796, 811
BssECI CCNNGG 3 cut(s) 40, 49, 1055
BssMI GATC 5 cut(s) 66, 287, 514, 597, 970
BssT1I CCWWGG 2 cut(s) 40, 1055
Bst2UI CCWGG 1 cut(s) 51
Bst4CI ACNGT 1 cut(s) 1015
BstAFI CTTAAG 1 cut(s) 496
BstAPI GCANNNNNTGC 1 cut(s) 267
BstC8I GCNNGC 3 cut(s) 268, 741, 775
BstDEI CTNAG 1 cut(s) 897
BstF5I GGATG 4 cut(s) 94, 370, 418, 610
BstHHI GCGC 4 cut(s) 699, 851, 871, 882
BstKTI GATC 5 cut(s) 69, 290, 517, 600, 973
BstMAI GTCTC 5 cut(s) 286, 345, 647, 895, 1004
BstMBI GATC 5 cut(s) 66, 287, 514, 597, 970
BstMWI GCNNNNNNNGC 4 cut(s) 267, 868, 877, 989
BstNI CCWGG 1 cut(s) 51
BstNSI RCATGY 2 cut(s) 437, 589
BstSCI CCNGG 1 cut(s) 49
BstSFI CTRYAG 1 cut(s) 668
BstSLI GKGCMC 1 cut(s) 48
BstV1I GCAGC 2 cut(s) 187, 755
BstV2I GAAGAC 1 cut(s) 1009
Bsu15I ATCGAT 1 cut(s) 600
BsuI GTATCC 2 cut(s) 336, 917
BsuTUI ATCGAT 1 cut(s) 600
BtsCI GGATG 4 cut(s) 94, 370, 418, 610
BtsI GCAGTG 1 cut(s) 768
BtsIMutI CAGTG 3 cut(s) 9, 140, 768
Cac8I GCNNGC 3 cut(s) 268, 741, 775
CfoI GCGC 4 cut(s) 699, 851, 871, 882
Cfr13I GGNCC 4 cut(s) 155, 362, 383, 893
ClaI ATCGAT 1 cut(s) 600
Csp6I GTAC 4 cut(s) 194, 394, 617, 793
CviAII CATG 6 cut(s) 32, 61, 434, 586, 623, 720
CviQI GTAC 4 cut(s) 194, 394, 617, 793
DdeI CTNAG 1 cut(s) 897
DpnI GATC 5 cut(s) 68, 289, 516, 599, 972
DpnII GATC 5 cut(s) 66, 287, 514, 597, 970
DraI TTTAAA 1 cut(s) 78
DrdI GACNNNNNNGTC 1 cut(s) 427
DseDI GACNNNNNNGTC 1 cut(s) 427
EciI GGCGGA 1 cut(s) 124
Eco130I CCWWGG 2 cut(s) 40, 1055
Eco24I GRGCYC 1 cut(s) 505
Eco31I GGTCTC 2 cut(s) 286, 647
Eco47I GGWCC 4 cut(s) 155, 362, 383, 893
Eco57I CTGAAG 1 cut(s) 210
EcoO109I RGGNCCY 1 cut(s) 893
EcoRII CCWGG 1 cut(s) 49
EcoT14I CCWWGG 2 cut(s) 40, 1055
EcoT38I GRGCYC 1 cut(s) 505
ErhI CCWWGG 2 cut(s) 40, 1055
Esp3I CGTCTC 1 cut(s) 895
FaeI CATG 6 cut(s) 35, 64, 437, 589, 626, 723
FaqI GGGAC 1 cut(s) 20
FatI CATG 6 cut(s) 31, 60, 433, 585, 622, 719
FauNDI CATATG 1 cut(s) 356
FbaI TGATCA 1 cut(s) 514
Fnu4HI GCNGC 2 cut(s) 176, 744
FokI GGATG 4 cut(s) 81, 357, 425, 597
FriOI GRGCYC 1 cut(s) 505
Fsp4HI GCNGC 2 cut(s) 176, 744
FspAI RTGCGCAY 1 cut(s) 698
FspBI CTAG 4 cut(s) 41, 479, 681, 774
FspI TGCGCA 1 cut(s) 698
GlaI GCGC 4 cut(s) 698, 850, 870, 881
GluI GCNGC 2 cut(s) 176, 744
GsuI CTGGAG 1 cut(s) 570
HhaI GCGC 4 cut(s) 699, 851, 871, 882
Hin1II CATG 6 cut(s) 35, 64, 437, 589, 626, 723
Hin6I GCGC 4 cut(s) 697, 849, 869, 880
HinP1I GCGC 4 cut(s) 697, 849, 869, 880
HinfI GANTC 2 cut(s) 14, 929
HphI GGTGA 2 cut(s) 497, 509
Hpy166II GTNNAC 3 cut(s) 362, 450, 558
Hpy188I TCNGA 3 cut(s) 190, 764, 900
Hpy188III TCNNGA 3 cut(s) 56, 291, 374
Hpy8I GTNNAC 3 cut(s) 362, 450, 558
Hpy99I CGWCG 1 cut(s) 1027
HpyAV CCTTC 2 cut(s) 109, 306
HpyCH4III ACNGT 1 cut(s) 1015
HpyCH4V TGCA 9 cut(s) 175, 261, 464, 470, 585, 628, 719, 731, 739
HpyF10VI GCNNNNNNNGC 4 cut(s) 267, 868, 877, 989
HpyF3I CTNAG 1 cut(s) 897
Hsp92II CATG 6 cut(s) 35, 64, 437, 589, 626, 723
HspAI GCGC 4 cut(s) 697, 849, 869, 880
Ksp22I TGATCA 1 cut(s) 514
Kzo9I GATC 5 cut(s) 66, 287, 514, 597, 970
Lsp1109I GCAGC 2 cut(s) 187, 755
LweI GCATC 2 cut(s) 403, 619
MaeI CTAG 4 cut(s) 41, 479, 681, 774
MaeIII GTNAC 4 cut(s) 56, 429, 802, 998
MalI GATC 5 cut(s) 68, 289, 516, 599, 972
MbiI CCGCTC 1 cut(s) 983
MboI GATC 5 cut(s) 66, 287, 514, 597, 970
MboII GAAGA 1 cut(s) 1009
MhlI GDGCHC 2 cut(s) 48, 505
MlyI GAGTC 1 cut(s) 8
MmeI TCCRAC 2 cut(s) 901, 959
MnlI CCTC 6 cut(s) 168, 219, 223, 235, 427, 906
MseI TTAA 3 cut(s) 77, 497, 908
MslI CAYNNNNRTG 2 cut(s) 887, 1005
MspCI CTTAAG 1 cut(s) 496
MspR9I CCNGG 1 cut(s) 51
Mva1269I GAATGC 1 cut(s) 383
MvaI CCWGG 1 cut(s) 51
MwoI GCNNNNNNNGC 4 cut(s) 267, 868, 877, 989
NdeI CATATG 1 cut(s) 356
NdeII GATC 5 cut(s) 66, 287, 514, 597, 970
NheI GCTAGC 1 cut(s) 773
NlaIII CATG 6 cut(s) 35, 64, 437, 589, 626, 723
NlaIV GGNNCC 3 cut(s) 47, 894, 957
NmuCI GTSAC 3 cut(s) 56, 429, 998
NsbI TGCGCA 1 cut(s) 698
NspI RCATGY 2 cut(s) 437, 589
PciI ACATGT 1 cut(s) 433
PctI GAATGC 1 cut(s) 383
PfeI GAWTC 1 cut(s) 929
PkrI GCNGC 2 cut(s) 177, 745
PleI GAGTC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 8
PpuMI RGGWCCY 1 cut(s) 893
PscI ACATGT 1 cut(s) 433
Psp5II RGGWCCY 1 cut(s) 893
Psp6I CCWGG 1 cut(s) 49
PspGI CCWGG 1 cut(s) 49
PspN4I GGNNCC 3 cut(s) 47, 894, 957
PspPI GGNCC 4 cut(s) 155, 362, 383, 893
PspPPI RGGWCCY 1 cut(s) 893
RsaI GTAC 4 cut(s) 195, 395, 618, 794
RsaNI GTAC 4 cut(s) 194, 394, 617, 793
RseI CAYNNNNRTG 2 cut(s) 887, 1005
SaqAI TTAA 3 cut(s) 77, 497, 908
SatI GCNGC 2 cut(s) 176, 744
Sau3AI GATC 5 cut(s) 66, 287, 514, 597, 970
Sau96I GGNCC 4 cut(s) 155, 362, 383, 893
ScaI AGTACT 1 cut(s) 395
SchI GAGTC 1 cut(s) 8
ScrFI CCNGG 1 cut(s) 51
SduI GDGCHC 2 cut(s) 48, 505
SetI ASST 5 cut(s) 151, 211, 298, 367, 748
SfaNI GCATC 2 cut(s) 403, 619
SfcI CTRYAG 1 cut(s) 668
SinI GGWCC 4 cut(s) 155, 362, 383, 893
SmiMI CAYNNNNRTG 2 cut(s) 887, 1005
SmlI CTYRAG 1 cut(s) 496
SmoI CTYRAG 1 cut(s) 496
SsiI CCGC 7 cut(s) 37, 70, 135, 381, 946, 981, 992
SspI AATATT 1 cut(s) 735
SspMI CTAG 4 cut(s) 41, 479, 681, 774
StyD4I CCNGG 1 cut(s) 49
StyI CCWWGG 2 cut(s) 40, 1055
TaaI ACNGT 1 cut(s) 1015
TaqI TCGA 5 cut(s) 106, 290, 419, 600, 985
TaqII GACCGA 1 cut(s) 143
TatI WGTACW 1 cut(s) 393
TfiI GAWTC 1 cut(s) 929
Tru1I TTAA 3 cut(s) 77, 497, 908
Tru9I TTAA 3 cut(s) 77, 497, 908
TscAI CASTG 3 cut(s) 16, 147, 775
TseFI GTSAC 3 cut(s) 56, 429, 998
TseI GCWGC 2 cut(s) 175, 743
Tsp45I GTSAC 3 cut(s) 56, 429, 998
TspGWI ACGGA 1 cut(s) 105
TspRI CASTG 3 cut(s) 16, 147, 775
Vha464I CTTAAG 1 cut(s) 496
VpaK11BI GGWCC 4 cut(s) 155, 362, 383, 893
XceI RCATGY 2 cut(s) 437, 589
XcmI CCANNNNNNNNNTGG 1 cut(s) 803
XmaJI CCTAGG 1 cut(s) 40
XspI CTAG 4 cut(s) 41, 479, 681, 774
ZrmI AGTACT 1 cut(s) 395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.