aspartic-type endopeptidase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 23 - 109 | 1.8e-24 | Reverse transcriptase (RNA-dependent DNA polymerase) |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 233 |
| AccII | CGCG | 1 cut(s) | 67 |
| AciI | CCGC | 2 cut(s) | 157, 241 |
| AclI | AACGTT | 1 cut(s) | 236 |
| AclWI | GGATC | 2 cut(s) | 8, 327 |
| AcoI | YGGCCR | 1 cut(s) | 94 |
| AfaI | GTAC | 1 cut(s) | 70 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 103, 163 |
| AflIII | ACRYGT | 1 cut(s) | 65 |
| AluBI | AGCT | 1 cut(s) | 286 |
| AluI | AGCT | 1 cut(s) | 286 |
| Alw26I | GTCTC | 2 cut(s) | 38, 200 |
| AlwI | GGATC | 2 cut(s) | 8, 327 |
| AoxI | GGCC | 2 cut(s) | 56, 94 |
| ApeKI | GCWGC | 1 cut(s) | 283 |
| AspLEI | GCGC | 1 cut(s) | 169 |
| AspS9I | GGNCC | 1 cut(s) | 56 |
| BalI | TGGCCA | 1 cut(s) | 96 |
| BbvI | GCAGC | 1 cut(s) | 295 |
| BcoDI | GTCTC | 2 cut(s) | 38, 200 |
| BfaI | CTAG | 2 cut(s) | 36, 323 |
| BisI | GCNGC | 1 cut(s) | 284 |
| BlsI | GCNGC | 1 cut(s) | 285 |
| BmgT120I | GGNCC | 1 cut(s) | 56 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 197, 229 |
| BsaJI | CCNNGG | 1 cut(s) | 255 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 199, 229 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 103, 163 |
| BseDI | CCNNGG | 1 cut(s) | 255 |
| BseGI | GGATG | 1 cut(s) | 298 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 103, 163 |
| BseRI | GAGGAG | 1 cut(s) | 218 |
| BseXI | GCAGC | 1 cut(s) | 295 |
| Bsh1236I | CGCG | 1 cut(s) | 67 |
| BshFI | GGCC | 2 cut(s) | 58, 96 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 103, 163 |
| BsmAI | GTCTC | 2 cut(s) | 38, 200 |
| BsnI | GGCC | 2 cut(s) | 58, 96 |
| Bsp143I | GATC | 2 cut(s) | 13, 319 |
| BspACI | CCGC | 2 cut(s) | 157, 241 |
| BspANI | GGCC | 2 cut(s) | 58, 96 |
| BspFNI | CGCG | 1 cut(s) | 67 |
| BspPI | GGATC | 2 cut(s) | 8, 327 |
| BssECI | CCNNGG | 1 cut(s) | 255 |
| BssMI | GATC | 2 cut(s) | 13, 319 |
| BssT1I | CCWWGG | 1 cut(s) | 255 |
| Bst4CI | ACNGT | 1 cut(s) | 49 |
| BstC8I | GCNNGC | 1 cut(s) | 157 |
| BstF5I | GGATG | 1 cut(s) | 298 |
| BstFNI | CGCG | 1 cut(s) | 67 |
| BstHHI | GCGC | 1 cut(s) | 169 |
| BstKTI | GATC | 2 cut(s) | 16, 322 |
| BstMAI | GTCTC | 2 cut(s) | 38, 200 |
| BstMBI | GATC | 2 cut(s) | 13, 319 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 18, 64 |
| BstNSI | RCATGY | 2 cut(s) | 83, 283 |
| BstUI | CGCG | 1 cut(s) | 67 |
| BstV1I | GCAGC | 1 cut(s) | 295 |
| BstX2I | RGATCY | 1 cut(s) | 319 |
| BstYI | RGATCY | 1 cut(s) | 319 |
| BsuRI | GGCC | 2 cut(s) | 58, 96 |
| BtsCI | GGATG | 1 cut(s) | 298 |
| Cac8I | GCNNGC | 1 cut(s) | 157 |
| CfoI | GCGC | 1 cut(s) | 169 |
| Cfr13I | GGNCC | 1 cut(s) | 56 |
| Csp6I | GTAC | 1 cut(s) | 69 |
| CviAII | CATG | 3 cut(s) | 18, 80, 280 |
| CviJI | RGCY | 4 cut(s) | 58, 96, 155, 286 |
| CviKI_1 | RGCY | 4 cut(s) | 58, 96, 155, 286 |
| CviQI | GTAC | 1 cut(s) | 69 |
| DpnI | GATC | 2 cut(s) | 15, 321 |
| DpnII | GATC | 2 cut(s) | 13, 319 |
| EaeI | YGGCCR | 1 cut(s) | 94 |
| Eco130I | CCWWGG | 1 cut(s) | 255 |
| EcoT14I | CCWWGG | 1 cut(s) | 255 |
| ErhI | CCWWGG | 1 cut(s) | 255 |
| FaeI | CATG | 3 cut(s) | 21, 83, 283 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 144, 176 |
| FatI | CATG | 3 cut(s) | 17, 79, 279 |
| FauI | CCCGC | 1 cut(s) | 164 |
| Fnu4HI | GCNGC | 1 cut(s) | 284 |
| FokI | GGATG | 1 cut(s) | 305 |
| Fsp4HI | GCNGC | 1 cut(s) | 284 |
| FspBI | CTAG | 2 cut(s) | 36, 323 |
| GlaI | GCGC | 1 cut(s) | 168 |
| GluI | GCNGC | 1 cut(s) | 284 |
| HaeIII | GGCC | 2 cut(s) | 58, 96 |
| HhaI | GCGC | 1 cut(s) | 169 |
| Hin1II | CATG | 3 cut(s) | 21, 83, 283 |
| Hin6I | GCGC | 1 cut(s) | 167 |
| HinP1I | GCGC | 1 cut(s) | 167 |
| HinfI | GANTC | 2 cut(s) | 30, 326 |
| Hpy166II | GTNNAC | 1 cut(s) | 71 |
| Hpy188I | TCNGA | 1 cut(s) | 268 |
| Hpy188III | TCNNGA | 1 cut(s) | 323 |
| Hpy8I | GTNNAC | 1 cut(s) | 71 |
| HpyCH4III | ACNGT | 1 cut(s) | 49 |
| HpyCH4IV | ACGT | 2 cut(s) | 228, 236 |
| HpyCH4V | TGCA | 2 cut(s) | 79, 283 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 18, 64 |
| HpySE526I | ACGT | 2 cut(s) | 228, 236 |
| Hsp92II | CATG | 3 cut(s) | 21, 83, 283 |
| HspAI | GCGC | 1 cut(s) | 167 |
| Kzo9I | GATC | 2 cut(s) | 13, 319 |
| LpnPI | CCDG | 1 cut(s) | 89 |
| Lsp1109I | GCAGC | 1 cut(s) | 295 |
| MaeI | CTAG | 2 cut(s) | 36, 323 |
| MaeII | ACGT | 2 cut(s) | 228, 236 |
| MaeIII | GTNAC | 1 cut(s) | 298 |
| MalI | GATC | 2 cut(s) | 15, 321 |
| MboI | GATC | 2 cut(s) | 13, 319 |
| MflI | RGATCY | 1 cut(s) | 319 |
| MlsI | TGGCCA | 1 cut(s) | 96 |
| MluCI | AATT | 1 cut(s) | 24 |
| MluI | ACGCGT | 1 cut(s) | 65 |
| MluNI | TGGCCA | 1 cut(s) | 96 |
| MnlI | CCTC | 2 cut(s) | 130, 196 |
| Mox20I | TGGCCA | 1 cut(s) | 96 |
| MscI | TGGCCA | 1 cut(s) | 96 |
| Msp20I | TGGCCA | 1 cut(s) | 96 |
| MvnI | CGCG | 1 cut(s) | 67 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 18, 64 |
| NdeII | GATC | 2 cut(s) | 13, 319 |
| NlaIII | CATG | 3 cut(s) | 21, 83, 283 |
| NspI | RCATGY | 2 cut(s) | 83, 283 |
| PfeI | GAWTC | 2 cut(s) | 30, 326 |
| PkrI | GCNGC | 1 cut(s) | 285 |
| PsiI | TTATAA | 1 cut(s) | 233 |
| Psp1406I | AACGTT | 1 cut(s) | 236 |
| PspPI | GGNCC | 1 cut(s) | 56 |
| PsuI | RGATCY | 1 cut(s) | 319 |
| RsaI | GTAC | 1 cut(s) | 70 |
| RsaNI | GTAC | 1 cut(s) | 69 |
| SatI | GCNGC | 1 cut(s) | 284 |
| Sau3AI | GATC | 2 cut(s) | 13, 319 |
| Sau96I | GGNCC | 1 cut(s) | 56 |
| SetI | ASST | 6 cut(s) | 141, 175, 231, 239, 249, 288 |
| Sse9I | AATT | 1 cut(s) | 24 |
| SsiI | CCGC | 2 cut(s) | 157, 241 |
| SspMI | CTAG | 2 cut(s) | 36, 323 |
| StyI | CCWWGG | 1 cut(s) | 255 |
| TaaI | ACNGT | 1 cut(s) | 49 |
| TaiI | ACGT | 2 cut(s) | 231, 239 |
| TaqI | TCGA | 1 cut(s) | 195 |
| TasI | AATT | 1 cut(s) | 24 |
| TfiI | GAWTC | 2 cut(s) | 30, 326 |
| TseI | GCWGC | 1 cut(s) | 283 |
| XbaI | TCTAGA | 1 cut(s) | 322 |
| XceI | RCATGY | 2 cut(s) | 83, 283 |
| XspI | CTAG | 2 cut(s) | 36, 323 |