Rmu_sc0008456.1_g000006

aspartic-type endopeptidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008456.1
OG0000161
Physical Location & Seq
Forward (+)
27203 .. 33818
6616 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008456.1_g000006.1.cds

Sequence Viewer

Length: 1590 bp
atgtttctccagtttcgggctgcacggatcgatctcgatttgtccttctcagatccggggcggaggcaatggtgcagcaacgacgaacttcggatttccagtggtggtttctggcctcatcgatcctacgtgggttgtggctgtggatattcagatcagatcgaggcagtggagatctcgaaagggatctatctccactttgatctgggatcgttttgtggtcgtttgtctggtgtaagggctggctctagagtgacaaggcggtgcagcgggggagggattctgcgcgacggcgtattgttacgaggcggcggcgtcgtggcgaaggggttcgctggcggcaggaatggttgcctgctgtacatactttttgctgggggaggtggtgtttgggttgggcctttgttcttgggtctctctggtggtcttttgttttcggtgctttctgggtatcaacgtgaaggtgaatcacccttacacgtggtctggctgttttgggacgcagtgtctgaacgggtgaaaacagttcatcttgatgttggtggctgggttgtatcagtacatgtttggttgttaatcattatagctcgcggcgccacagtgcctagcccagcacacgggcctccaccccaacccacctgcacgcggcatcccccagcagtccaactcctgcaataccagcatccccgtgcggccgtgcccacctcatcgatcccagcctgcacgcccaggccactcgatcccagcccacctggcagagcaccgcagcctccagcctcctgcccgcgcgcgtttgtagtagtccatagtaccttgcagcggcagccactggtctgcagcaacccacccatcgctgctgtagcaacccagctggcaaacctgcacctgcagcccatcccagcagctcaccaatcccgcctagctgctgccttgcccagccactgcctcgccgagccactgccttctctgatccagcctccacgccccacagcagctgccctgccaaaacaaaaaagagggacagagaacaggcgaagaaagaaggaggagagaggaaagaggacgcaaaaaaaaaaaaaaaaagtgacgagatcacatataccagctgcaaatgtgcctgcaaggttagaagtccctaacaaagggtacggtgctgcagatagaagcactgcaaccacacttagtggaggtgtggttgaggtcgtggcttctcaaaggaagagggggaggccacttggttcgattgacactcacccaaggaagaaaagggcgagtaaggcacaaaccgatccattaatcatcaatgtagagaatccttctcatgagattgtctctgattatagttatgtccatgaatcaatactggaggacgctccgatgtttgaaatgattccagagaacaaagaaatctcaatggattatgagagtgcgtatgagttgatagaaatatcttccatacacattgatgatgtatttgcatacactgttgctcaagaaatcatagagtacgatgatatcgaaccacgctctgttgcagaatgtcaacaaagggaagattggcctaaatggaaagaagcaatccagggataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 rve

Protein Analysis

529

Amino Acids

57.75

Weight (kDa)

9.2

Isoelectric Point (pI)

58.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000161)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g36192 FvH4_3g41702 FvH4_4g13933 FvH4_6g39331 FvH4_6g44542
malus_domestica MD17G1101700.v1.1
pyrus_communis pycom01g01810 pycom01g03340 pycom05g22610 pycom13g03220 pycom13g23770 pycom13g26870 pycom17g17400 pycom17g17410 pycom17g17890
rosa_chinensis RchiOBHm_Chr2g0129881 RchiOBHm_Chr2g0163801 RchiOBHm_Chr4g0392871 RchiOBHm_Chr7g0218471
rosa_multiflora Rmu_co8005914.1_g000001 Rmu_co8214666.1_g000002 Rmu_co8253889.1_g000001 Rmu_co8429419.1_g000001 Rmu_sc0000031.1_g000049 Rmu_sc0000091.1_g000004 Rmu_sc0000103.1_g000050 Rmu_sc0000147.1_g000047 Rmu_sc0000185.1_g000026 Rmu_sc0000235.1_g000056 Rmu_sc0000247.1_g000002 Rmu_sc0000310.1_g000010 Rmu_sc0000353.1_g000034 Rmu_sc0000353.1_g000035 Rmu_sc0000367.1_g000046 Rmu_sc0000420.1_g000034 Rmu_sc0000461.1_g000022 Rmu_sc0000544.1_g000007 Rmu_sc0000544.1_g000009 Rmu_sc0000607.1_g000032 Rmu_sc0000647.1_g000011 Rmu_sc0000675.1_g000049 Rmu_sc0000680.1_g000015 Rmu_sc0000795.1_g000112 Rmu_sc0000851.1_g000013 Rmu_sc0000868.1_g000019 Rmu_sc0000869.1_g000009 Rmu_sc0000898.1_g000061 Rmu_sc0000990.1_g000006 Rmu_sc0001009.1_g000006 Rmu_sc0001051.1_g000034 Rmu_sc0001067.1_g000005 Rmu_sc0001124.1_g000020 Rmu_sc0001142.1_g000016 Rmu_sc0001231.1_g000015 Rmu_sc0001235.1_g000013 Rmu_sc0001336.1_g000036 Rmu_sc0001552.1_g000033 Rmu_sc0001604.1_g000003 Rmu_sc0001605.1_g000009 Rmu_sc0001605.1_g000011 Rmu_sc0001668.1_g000025 Rmu_sc0001698.1_g000009 Rmu_sc0001721.1_g000010 Rmu_sc0001735.1_g000004 Rmu_sc0001832.1_g000017 Rmu_sc0001844.1_g000024 Rmu_sc0001880.1_g000026 Rmu_sc0001896.1_g000018 Rmu_sc0001918.1_g000011 Rmu_sc0002072.1_g000022 Rmu_sc0002109.1_g000003 Rmu_sc0002142.1_g000017 Rmu_sc0002166.1_g000001 Rmu_sc0002207.1_g000015 Rmu_sc0002346.1_g000001 Rmu_sc0002460.1_g000009 Rmu_sc0002460.1_g000043 Rmu_sc0002460.1_g000071 Rmu_sc0002672.1_g000001 Rmu_sc0002699.1_g000019 Rmu_sc0002736.1_g000007 Rmu_sc0002773.1_g000003 Rmu_sc0002893.1_g000006 Rmu_sc0002968.1_g000014 Rmu_sc0002968.1_g000015 Rmu_sc0003032.1_g000020 Rmu_sc0003044.1_g000024 Rmu_sc0003200.1_g000007 Rmu_sc0003261.1_g000031 Rmu_sc0003347.1_g000014 Rmu_sc0003385.1_g000019 Rmu_sc0003385.1_g000020 Rmu_sc0003419.1_g000017 Rmu_sc0003605.1_g000029 Rmu_sc0003679.1_g000010 Rmu_sc0003708.1_g000002 Rmu_sc0003737.1_g000033 Rmu_sc0003981.1_g000021 Rmu_sc0004101.1_g000009 Rmu_sc0004119.1_g000009 Rmu_sc0004248.1_g000021 Rmu_sc0004362.1_g000013 Rmu_sc0004520.1_g000020 Rmu_sc0004741.1_g000017 Rmu_sc0004771.1_g000007 Rmu_sc0004835.1_g000027 Rmu_sc0004969.1_g000010 Rmu_sc0005037.1_g000002 Rmu_sc0005272.1_g000006 Rmu_sc0005584.1_g000017 Rmu_sc0005652.1_g000005 Rmu_sc0005670.1_g000010 Rmu_sc0005781.1_g000035 Rmu_sc0005816.1_g000026 Rmu_sc0005852.1_g000003 Rmu_sc0006087.1_g000008 Rmu_sc0006152.1_g000005 Rmu_sc0006160.1_g000001 Rmu_sc0006313.1_g000014 Rmu_sc0006347.1_g000001 Rmu_sc0006583.1_g000024 Rmu_sc0006711.1_g000018 Rmu_sc0006952.1_g000003 Rmu_sc0006976.1_g000006 Rmu_sc0007115.1_g000006 Rmu_sc0007490.1_g000028 Rmu_sc0007740.1_g000003 Rmu_sc0007779.1_g000001 Rmu_sc0007907.1_g000003 Rmu_sc0007967.1_g000003 Rmu_sc0008456.1_g000006 Rmu_sc0008578.1_g000003 Rmu_sc0008642.1_g000001 Rmu_sc0008848.1_g000001 Rmu_sc0010065.1_g000009 Rmu_sc0010263.1_g000003 Rmu_sc0010632.1_g000004 Rmu_sc0011050.1_g000004 Rmu_sc0011563.1_g000005 Rmu_sc0011854.1_g000001 Rmu_sc0012216.1_g000003 Rmu_sc0012689.1_g000002 Rmu_sc0012945.1_g000001 Rmu_sc0013071.1_g000003 Rmu_sc0013305.1_g000008 Rmu_sc0013698.1_g000009 Rmu_sc0013772.1_g000007 Rmu_sc0013874.1_g000001 Rmu_sc0014217.1_g000001 Rmu_sc0014478.1_g000019 Rmu_sc0014724.1_g000002 Rmu_sc0016563.1_g000002 Rmu_sc0016563.1_g000003 Rmu_sc0017108.1_g000001 Rmu_sc0017408.1_g000002 Rmu_sc0020248.1_g000001 Rmu_sc0021416.1_g000005 Rmu_sc0022221.1_g000003 Rmu_sc0022402.1_g000002 Rmu_sc0023172.1_g000001 Rmu_sc0024783.1_g000001 Rmu_sc0028152.1_g000001 Rmu_sc0028541.1_g000001 Rmu_sc0029935.1_g000001 Rmu_sc0030041.1_g000001 Rmu_sc0035924.1_g000001 Rmu_sc0038113.1_g000002 Rmu_sc0040377.1_g000001 Rmu_ssc0000041.1_g000024 Rmu_ssc0000197.1_g000066 Rmu_ssc0000213.1_g000082 Rmu_ssc0000215.1_g000018
rosa_roxburghii Rroxscaffold_152G00434500 Rroxscaffold_3G00223490 Rroxscaffold_3G00226440 Rroxscaffold_3G00237960 Rroxscaffold_6G00394150
rosa_samantha Rh5CG379600 Rh5CG449200 Rh6DG448500
rosa_wichuraiana Rw0G004320 Rw1G010800 Rw2G031280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 647, 894
Acc36I ACCTGC 3 cut(s) 647, 888, 894
AccB1I GGYRCC 1 cut(s) 593
AccII CGCG 6 cut(s) 288, 591, 646, 787, 789, 791
AclWI GGATC 9 cut(s) 35, 47, 117, 194, 217, 706, 734, 964, 1283
AcoI YGGCCR 1 cut(s) 693
AcvI CACGTG 1 cut(s) 481
AcyI GRCGYC 2 cut(s) 315, 594
AdeI CACNNNGTG 1 cut(s) 1184
AfaI GTAC 5 cut(s) 362, 561, 811, 1148, 1508
AfiI CCNNNNNNNGG 5 cut(s) 16, 617, 645, 819, 1142
AflIII ACRYGT 2 cut(s) 478, 562
AgsI TTSAA 1 cut(s) 1385
AhdI GACNNNNNGTC 1 cut(s) 505
AjnI CCWGG 3 cut(s) 728, 751, 1581
AluBI AGCT 6 cut(s) 587, 871, 905, 923, 995, 1106
AluI AGCT 6 cut(s) 587, 871, 905, 923, 995, 1106
Alw21I GWGCWC 1 cut(s) 763
Alw26I GTCTC 2 cut(s) 419, 1336
AlwI GGATC 9 cut(s) 35, 47, 117, 194, 217, 706, 734, 964, 1283
AlwNI CAGNNNCTG 4 cut(s) 509, 829, 942, 995
AoxI GGCC 7 cut(s) 113, 398, 620, 693, 731, 1229, 1559
AseI ATTAAT 1 cut(s) 1295
Asp700I GAANNNNTTC 2 cut(s) 329, 1389
AspLEI GCGC 4 cut(s) 288, 596, 789, 791
AspS9I GGNCC 2 cut(s) 398, 620
AsuC2I CCSGG 1 cut(s) 57
AsuHPI GGTGA 5 cut(s) 462, 476, 529, 899, 1244
BaeGI GKGCMC 1 cut(s) 702
BanI GGYRCC 1 cut(s) 593
BbrPI CACGTG 1 cut(s) 481
Bbv12I GWGCWC 1 cut(s) 763
BccI CCATC 2 cut(s) 857, 902
BceAI ACGGC 2 cut(s) 307, 680
BciT130I CCWGG 3 cut(s) 730, 753, 1583
BcnI CCSGG 1 cut(s) 57
BcoDI GTCTC 2 cut(s) 419, 1336
BfaI CTAG 3 cut(s) 249, 606, 920
BfmI CTRYAG 4 cut(s) 835, 858, 887, 1155
BfoI RGCGCY 1 cut(s) 597
BfuAI ACCTGC 3 cut(s) 647, 888, 894
BglI GCCNNNNNGGC 1 cut(s) 753
BglII AGATCT 1 cut(s) 174
Bme1390I CCNGG 4 cut(s) 57, 730, 753, 1583
BmeRI GACNNNNNGTC 1 cut(s) 505
BmgT120I GGNCC 2 cut(s) 398, 620
BmiI GGNNCC 1 cut(s) 595
BmrFI CCNGG 4 cut(s) 57, 730, 753, 1583
BmsI GCATC 2 cut(s) 658, 691
BplI GAGNNNNNCTC 2 cut(s) 1316, 1348
BpmI CTGGAG 2 cut(s) 756, 1385
BpuEI CTTGAG 1 cut(s) 1476
BpuMI CCSGG 1 cut(s) 57
Bsa29I ATCGAT 3 cut(s) 30, 121, 710
BsaAI YACGTR 2 cut(s) 130, 481
BsaHI GRCGYC 2 cut(s) 315, 594
BsaI GGTCTC 1 cut(s) 419
BsaJI CCNNGG 4 cut(s) 56, 728, 1256, 1582
BsaXI ACNNNNNCTCC 4 cut(s) 372, 402, 1179, 1209
Bsc4I CCNNNNNNNGG 5 cut(s) 16, 617, 645, 819, 1142
Bse1I ACTGG 4 cut(s) 10, 99, 834, 1368
Bse3DI GCAATG 1 cut(s) 74
BseBI CCWGG 3 cut(s) 730, 753, 1583
BseCI ATCGAT 3 cut(s) 30, 121, 710
BseDI CCNNGG 4 cut(s) 56, 728, 1256, 1582
BseGI GGATG 3 cut(s) 649, 682, 894
BseLI CCNNNNNNNGG 5 cut(s) 16, 617, 645, 819, 1142
BseMI GCAATG 1 cut(s) 74
BseMII CTCAG 1 cut(s) 63
BseNI ACTGG 4 cut(s) 10, 99, 834, 1368
BsePI GCGCGC 1 cut(s) 787
BseRI GAGGAG 1 cut(s) 1061
BseSI GKGCMC 1 cut(s) 702
BseX3I CGGCCG 1 cut(s) 693
BseYI CCCAGC 9 cut(s) 374, 546, 610, 655, 715, 743, 867, 898, 935
BsgI GTGCAG 6 cut(s) 6, 94, 286, 625, 706, 866
Bsh1236I CGCG 6 cut(s) 288, 591, 646, 787, 789, 791
Bsh1285I CGRYCG 1 cut(s) 696
BshFI GGCC 7 cut(s) 115, 400, 622, 695, 733, 1231, 1561
BshNI GGYRCC 1 cut(s) 593
BshVI ATCGAT 3 cut(s) 30, 121, 710
BsiEI CGRYCG 1 cut(s) 696
BsiHKAI GWGCWC 1 cut(s) 763
BsiSI CCGG 1 cut(s) 56
BslFI GGGAC 3 cut(s) 512, 1033, 1118
BslI CCNNNNNNNGG 5 cut(s) 16, 617, 645, 819, 1142
BsmAI GTCTC 2 cut(s) 419, 1336
BsmFI GGGAC 3 cut(s) 512, 1033, 1118
BsnI GGCC 7 cut(s) 115, 400, 622, 695, 733, 1231, 1561
Bso31I GGTCTC 1 cut(s) 419
Bsp1286I GDGCHC 2 cut(s) 702, 763
Bsp1407I TGTACA 1 cut(s) 360
BspANI GGCC 7 cut(s) 115, 400, 622, 695, 733, 1231, 1561
BspCNI CTCAG 1 cut(s) 62
BspDI ATCGAT 3 cut(s) 30, 121, 710
BspFNI CGCG 6 cut(s) 288, 591, 646, 787, 789, 791
BspHI TCATGA 1 cut(s) 1321
BspLI GGNNCC 1 cut(s) 595
BspMAI CTGCAG 3 cut(s) 839, 891, 1159
BspMI ACCTGC 3 cut(s) 647, 888, 894
BspPI GGATC 9 cut(s) 35, 47, 117, 194, 217, 706, 734, 964, 1283
BspT107I GGYRCC 1 cut(s) 593
BspTNI GGTCTC 1 cut(s) 419
BsrDI GCAATG 1 cut(s) 74
BsrGI TGTACA 1 cut(s) 360
BsrI ACTGG 4 cut(s) 10, 99, 834, 1368
BssECI CCNNGG 4 cut(s) 56, 728, 1256, 1582
BssHII GCGCGC 1 cut(s) 787
BssNI GRCGYC 2 cut(s) 315, 594
BssT1I CCWWGG 1 cut(s) 1256
Bst2UI CCWGG 3 cut(s) 730, 753, 1583
Bst4CI ACNGT 4 cut(s) 526, 601, 1151, 1486
Bst6I CTCTTC 1 cut(s) 1214
BstACI GRCGYC 2 cut(s) 315, 594
BstAUI TGTACA 1 cut(s) 360
BstBAI YACGTR 2 cut(s) 130, 481
BstDEI CTNAG 2 cut(s) 49, 1181
BstENI CCTNNNNNAGG 1 cut(s) 1140
BstF5I GGATG 3 cut(s) 649, 682, 894
BstFNI CGCG 6 cut(s) 288, 591, 646, 787, 789, 791
BstH2I RGCGCY 1 cut(s) 597
BstHHI GCGC 4 cut(s) 288, 596, 789, 791
BstMAI GTCTC 2 cut(s) 419, 1336
BstMCI CGRYCG 1 cut(s) 696
BstMWI GCNNNNNNNGC 7 cut(s) 593, 679, 753, 823, 860, 889, 1277
BstNI CCWGG 3 cut(s) 730, 753, 1583
BstNSI RCATGY 1 cut(s) 566
BstSCI CCNGG 4 cut(s) 55, 728, 751, 1581
BstSFI CTRYAG 4 cut(s) 835, 858, 887, 1155
BstSLI GKGCMC 1 cut(s) 702
BstUI CGCG 6 cut(s) 288, 591, 646, 787, 789, 791
BstX2I RGATCY 3 cut(s) 52, 174, 186
BstYI RGATCY 3 cut(s) 52, 174, 186
BstZI CGGCCG 1 cut(s) 693
Bsu15I ATCGAT 3 cut(s) 30, 121, 710
BsuRI GGCC 7 cut(s) 115, 400, 622, 695, 733, 1231, 1561
BsuTUI ATCGAT 3 cut(s) 30, 121, 710
BtgZI GCGATG 1 cut(s) 835
BtsCI GGATG 3 cut(s) 649, 682, 894
BtsI GCAGTG 5 cut(s) 174, 510, 940, 956, 1167
BtsIMutI CAGTG 9 cut(s) 106, 174, 510, 606, 827, 940, 956, 1167, 1482
BveI ACCTGC 3 cut(s) 647, 888, 894
CaiI CAGNNNCTG 4 cut(s) 509, 829, 942, 995
CciI TCATGA 1 cut(s) 1321
CfoI GCGC 4 cut(s) 288, 596, 789, 791
Cfr13I GGNCC 2 cut(s) 398, 620
ClaI ATCGAT 3 cut(s) 30, 121, 710
CseI GACGC 4 cut(s) 304, 509, 1072, 1379
Csp6I GTAC 5 cut(s) 361, 560, 810, 1147, 1507
CviAII CATG 3 cut(s) 563, 1322, 1352
CviQI GTAC 5 cut(s) 361, 560, 810, 1147, 1507
DdeI CTNAG 2 cut(s) 49, 1181
DinI GGCGCC 1 cut(s) 595
DraIII CACNNNGTG 1 cut(s) 1184
DriI GACNNNNNGTC 1 cut(s) 505
EaeI YGGCCR 1 cut(s) 693
EagI CGGCCG 1 cut(s) 693
Eam1104I CTCTTC 1 cut(s) 1214
Eam1105I GACNNNNNGTC 1 cut(s) 505
EarI CTCTTC 1 cut(s) 1214
EciI GGCGGA 1 cut(s) 76
EclXI CGGCCG 1 cut(s) 693
Eco130I CCWWGG 1 cut(s) 1256
Eco31I GGTCTC 1 cut(s) 419
Eco32I GATATC 1 cut(s) 1516
Eco52I CGGCCG 1 cut(s) 693
Eco72I CACGTG 1 cut(s) 481
EcoNI CCTNNNNNAGG 1 cut(s) 1140
EcoRII CCWGG 3 cut(s) 728, 751, 1581
EcoRV GATATC 1 cut(s) 1516
EcoT14I CCWWGG 1 cut(s) 1256
EgeI GGCGCC 1 cut(s) 595
EheI GGCGCC 1 cut(s) 595
ErhI CCWWGG 1 cut(s) 1256
FaeI CATG 3 cut(s) 566, 1325, 1355
FaqI GGGAC 3 cut(s) 512, 1033, 1118
FatI CATG 3 cut(s) 562, 1321, 1351
FauI CCCGC 3 cut(s) 263, 792, 923
FokI GGATG 3 cut(s) 636, 669, 881
FspBI CTAG 3 cut(s) 249, 606, 920
GlaI GCGC 4 cut(s) 287, 595, 788, 790
GsaI CCCAGC 9 cut(s) 378, 550, 614, 659, 719, 747, 871, 902, 939
GsuI CTGGAG 2 cut(s) 756, 1385
HaeII RGCGCY 1 cut(s) 597
HaeIII GGCC 7 cut(s) 115, 400, 622, 695, 733, 1231, 1561
HapII CCGG 1 cut(s) 56
HgaI GACGC 4 cut(s) 304, 509, 1072, 1379
HhaI GCGC 4 cut(s) 288, 596, 789, 791
Hin1I GRCGYC 2 cut(s) 315, 594
Hin1II CATG 3 cut(s) 566, 1325, 1355
Hin6I GCGC 4 cut(s) 286, 594, 787, 789
HinP1I GCGC 4 cut(s) 286, 594, 787, 789
HincII GTYRAC 1 cut(s) 1544
HindII GTYRAC 1 cut(s) 1544
HinfI GANTC 5 cut(s) 280, 467, 1312, 1355, 1390
HpaII CCGG 1 cut(s) 56
HphI GGTGA 5 cut(s) 462, 476, 529, 899, 1244
Hpy166II GTNNAC 1 cut(s) 1544
Hpy188I TCNGA 8 cut(s) 52, 93, 154, 159, 511, 969, 1336, 1377
Hpy188III TCNNGA 7 cut(s) 35, 178, 249, 533, 1322, 1394, 1493
Hpy8I GTNNAC 1 cut(s) 1544
Hpy99I CGWCG 3 cut(s) 86, 293, 320
HpyAV CCTTC 6 cut(s) 55, 319, 455, 972, 1036, 1326
HpyCH4III ACNGT 4 cut(s) 526, 601, 1151, 1486
HpyCH4IV ACGT 3 cut(s) 129, 457, 480
HpyF10VI GCNNNNNNNGC 7 cut(s) 593, 679, 753, 823, 860, 889, 1277
HpyF3I CTNAG 2 cut(s) 49, 1181
HpySE526I ACGT 3 cut(s) 129, 457, 480
Hsp92I GRCGYC 2 cut(s) 315, 594
Hsp92II CATG 3 cut(s) 566, 1325, 1355
HspAI GCGC 4 cut(s) 286, 594, 787, 789
KasI GGCGCC 1 cut(s) 593
LmnI GCTCC 1 cut(s) 1378
LweI GCATC 2 cut(s) 658, 691
MaeI CTAG 3 cut(s) 249, 606, 920
MaeII ACGT 3 cut(s) 129, 457, 480
MaeIII GTNAC 3 cut(s) 253, 300, 1084
MauBI CGCGCGCG 1 cut(s) 787
MboII GAAGA 5 cut(s) 1047, 1231, 1273, 1443, 1565
MflI RGATCY 3 cut(s) 52, 174, 186
MhlI GDGCHC 2 cut(s) 702, 763
Mly113I GGCGCC 1 cut(s) 594
MmeI TCCRAC 1 cut(s) 688
MroXI GAANNNNTTC 2 cut(s) 329, 1389
MseI TTAA 2 cut(s) 575, 1295
MslI CAYNNNNRTG 3 cut(s) 534, 687, 1464
MspA1I CMGCKG 5 cut(s) 270, 820, 871, 995, 1106
MspI CCGG 1 cut(s) 56
MspR9I CCNGG 4 cut(s) 57, 730, 753, 1583
MvaI CCWGG 3 cut(s) 730, 753, 1583
MvnI CGCG 6 cut(s) 288, 591, 646, 787, 789, 791
MwoI GCNNNNNNNGC 7 cut(s) 593, 679, 753, 823, 860, 889, 1277
NarI GGCGCC 1 cut(s) 594
NciI CCSGG 1 cut(s) 57
NlaIII CATG 3 cut(s) 566, 1325, 1355
NlaIV GGNNCC 1 cut(s) 595
NmeAIII GCCGAG 1 cut(s) 976
NmuCI GTSAC 2 cut(s) 253, 1084
NspI RCATGY 1 cut(s) 566
PagI TCATGA 1 cut(s) 1321
PaqCI CACCTGC 2 cut(s) 647, 894
PauI GCGCGC 1 cut(s) 787
PciI ACATGT 1 cut(s) 562
PcsI WCGNNNNNNNCGW 1 cut(s) 1515
PdmI GAANNNNTTC 2 cut(s) 329, 1389
PfeI GAWTC 5 cut(s) 280, 467, 1312, 1355, 1390
PluTI GGCGCC 1 cut(s) 597
PmaCI CACGTG 1 cut(s) 481
PmlI CACGTG 1 cut(s) 481
Ppu21I YACGTR 2 cut(s) 130, 481
PscI ACATGT 1 cut(s) 562
PshBI ATTAAT 1 cut(s) 1295
Psp6I CCWGG 3 cut(s) 728, 751, 1581
PspCI CACGTG 1 cut(s) 481
PspFI CCCAGC 9 cut(s) 374, 546, 610, 655, 715, 743, 867, 898, 935
PspGI CCWGG 3 cut(s) 728, 751, 1581
PspN4I GGNNCC 1 cut(s) 595
PspPI GGNCC 2 cut(s) 398, 620
PstI CTGCAG 3 cut(s) 839, 891, 1159
PstNI CAGNNNCTG 4 cut(s) 509, 829, 942, 995
PsuI RGATCY 3 cut(s) 52, 174, 186
PteI GCGCGC 1 cut(s) 787
PvuII CAGCTG 3 cut(s) 871, 995, 1106
RsaI GTAC 5 cut(s) 362, 561, 811, 1148, 1508
RsaNI GTAC 5 cut(s) 361, 560, 810, 1147, 1507
RseI CAYNNNNRTG 3 cut(s) 534, 687, 1464
SaqAI TTAA 2 cut(s) 575, 1295
Sau96I GGNCC 2 cut(s) 398, 620
ScrFI CCNGG 4 cut(s) 57, 730, 753, 1583
SduI GDGCHC 2 cut(s) 702, 763
SfaNI GCATC 2 cut(s) 658, 691
SfcI CTRYAG 4 cut(s) 835, 858, 887, 1155
SfoI GGCGCC 1 cut(s) 595
SmiMI CAYNNNNRTG 3 cut(s) 534, 687, 1464
SmlI CTYRAG 1 cut(s) 1491
SmoI CTYRAG 1 cut(s) 1491
SspDI GGCGCC 1 cut(s) 593
SspMI CTAG 3 cut(s) 249, 606, 920
StyD4I CCNGG 4 cut(s) 55, 728, 751, 1581
StyI CCWWGG 1 cut(s) 1256
TaaI ACNGT 4 cut(s) 526, 601, 1151, 1486
TaiI ACGT 3 cut(s) 132, 460, 483
TaqI TCGA 9 cut(s) 30, 36, 121, 162, 179, 710, 738, 1241, 1518
TatI WGTACW 2 cut(s) 360, 559
TauI GCSGC 7 cut(s) 312, 315, 342, 594, 649, 695, 823
TfiI GAWTC 5 cut(s) 280, 467, 1312, 1355, 1390
Tru1I TTAA 2 cut(s) 575, 1295
Tru9I TTAA 2 cut(s) 575, 1295
TscAI CASTG 9 cut(s) 106, 174, 510, 606, 834, 947, 963, 1174, 1489
TseFI GTSAC 2 cut(s) 253, 1084
Tsp45I GTSAC 2 cut(s) 253, 1084
TspDTI ATGAA 2 cut(s) 518, 1368
TspGWI ACGGA 1 cut(s) 40
TspRI CASTG 9 cut(s) 106, 174, 510, 606, 834, 947, 963, 1174, 1489
VspI ATTAAT 1 cut(s) 1295
XagI CCTNNNNNAGG 1 cut(s) 1140
XbaI TCTAGA 1 cut(s) 248
XceI RCATGY 1 cut(s) 566
XmnI GAANNNNTTC 2 cut(s) 329, 1389
XspI CTAG 3 cut(s) 249, 606, 920
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.