Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0000271

Physical Location & Seq

Genomic Coordinates Forward (+)

5712682 .. 5714679

Gene Structure 1998 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g08140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1110 bp

ATGCATAGAATAAATACGGGAAGCTCCGATCAGATAGAGAAGGAGACAGAGAGCATCCAAAAGCCTTACAATCTCTGTCAGTGGCAGCCGATGAGAAGAAGAAAGGAAGCTAAGATGGAGAACCCACTATCGTCTCACTCTCACTCTCGCATCAACTTTATCGACATTGAAGACGACACCTTCCGCTTTACACCCACTTCGCGGAATCCTTCAATCAACCCCATCAACGTCGACGACGAAGACCAAGACCTCCGATCGATCACGGCTTCTTTGCTCAAATCGGTGCCTACTCCCGCCGAAGCCGATAACTTTATCGACCTTTCTGAAGAAACCCTAGACTTCTACGACGGTGATGACGAGCTCAGAATTCTTAGGTTTAAACCCTCGAAAACTCCCTTCGGAAAGAGAGGAAAAGGGTTATTTTCGGATTTTTCCGCGACCGAATCAGGGCAATCTTCAAATTCCAAAGGTGACCCGGATTTCGTTTGTGAAATCTGCGTCGAACCCAAGTCGGGAATCGAGTCGTTTCGGATCGAAAACTGCAGCCCTGGTTATTGTACTGAGTGTATGGCTAAGTACGTGGCCTCCAAGCTTCAAGAGAACATTACCAGCATTAGGTGCCCTGTTCCTGATTGTATAGGGTTGCTGGAGCCGGAGTATTGCCGGCCGATTCTGCCTCCGGAGGTGTTTGACCAGTGGGGAACTGCATTGTGTGAGGCTGTGATTCTTGGGTCAGAGAAATTCTACTGCCCCTATAAGGATTGCTCTGCAATGTTGATTGATGATGGGAAAGAGGTTGTGAGGCAATCAGCGTGTCCAAATTGTTGGAGAATGTTCTGTGCTCAGTGTAAGGCTCCTTGGCACGAGGGGATCGAATGCGAGGAGTTTCTAAAGTTGAATAAGGATGAGAGGGAAAGGGAGGATATCATGTTGAAGAACCTTGCGCAGAAGCAACAATGGAGAAGATGCCCCAAATGTAGGTTCTATGTGGAAAAATCGATGGGTTGCATGTTCATGATGTGCAGGTGCAGAACTGCTTTCTGCTACAGATGTGGAGACGTTTTAGAGAACATTCATAACCATTATTGTCCTAGTTGTGGGGGTAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0012505 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR zf-C3HC4

Protein Analysis

370

Amino Acids

42.39

Weight (kDa)

5.33

Isoelectric Point (pI)

66.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	244 - 293	3.6e-09	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000271)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14250
fragaria_vesca	FvH4_1g09490 FvH4_1g09500 FvH4_1g09500 FvH4_1g09510 FvH4_3g00870 FvH4_3g03010 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g35700 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220
malus_domestica	MD02G1102400.v1.1 MD02G1103700.v1.1 MD03G1111900.v1.1 MD09G1173800.v1.1 MD09G1230900.v1.1 MD09G1231400.v1.1 MD15G1224200.v1.1
prunus_persica	Prupe.3G031900_v2.0.a1 Prupe.3G107200_v2.0.a1 Prupe.7G191200_v2.0.a1 Prupe.7G191800_v2.0.a1 Prupe.8G007700_v2.0.a1
pyrus_communis	pycom02g08010 pycom02g08140 pycom09g14980 pycom09g15030 pycom15g19900
rosa_chinensis	RchiOBHm_Chr2g0096041 RchiOBHm_Chr2g0096051 RchiOBHm_Chr2g0096061 RchiOBHm_Chr2g0096071 RchiOBHm_Chr2g0096081 RchiOBHm_Chr2g0096221 RchiOBHm_Chr2g0131511 RchiOBHm_Chr2g0147691 RchiOBHm_Chr5g0001281 RchiOBHm_Chr5g0001301
rosa_laevigata	RLG00000016619 RLG00000016620 RLG00000016621 RLG00000016622 RLG00000019200 RLG00000020271 RLG00000025410 RLG00000030919 RLG00000031102 RLG00000031117 RLG00000031119 RLG00000031120
rosa_multiflora	Rmu_co8160592.1_g000001 Rmu_sc0001706.1_g000008 Rmu_sc0002494.1_g000005 Rmu_sc0004189.1_g000040 Rmu_sc0005612.1_g000008 Rmu_sc0005612.1_g000011 Rmu_sc0005612.1_g000012 Rmu_sc0006926.1_g000015 Rmu_sc0013257.1_g000002 Rmu_sc0034363.1_g000001 Rmu_sc0034363.1_g000002
rosa_roxburghii	Rroxscaffold_1G00072690 Rroxscaffold_1G00075020 Rroxscaffold_2G00145780 Rroxscaffold_2G00145790 Rroxscaffold_2G00145800 Rroxscaffold_2G00145810 Rroxscaffold_2G00145820 Rroxscaffold_2G00145830 Rroxscaffold_4G00300930 Rroxscaffold_6G00424750
rosa_rugosa	Rorug02G0056000 Rorug02G0056100 Rorug02G0056200 Rorug02G0056300 Rorug02G0056500 Rorug02G0056700 Rorug02G0298000.1 Rorug02G0400900 Rorug02G0401000 Rorug02G0401100 Rorug04G0389500 Rorug04G0389600 Rorug04G0389700 Rorug04G0402300
rosa_samantha	Rh2AG103800 Rh2AG458300 Rh2BG105400 Rh2BG105500 Rh2BG105600 Rh2BG105700 Rh2BG105900 Rh2BG357600 Rh2BG471000 Rh2DG106000 Rh2DG106100 Rh2DG106200 Rh2DG106300 Rh2DG106500 Rh2DG375400 Rh2DG480300 Rh5AG009500 Rh5AG009600 Rh5AG010000 Rh5AG028300 Rh5BG012400 Rh5BG012500 Rh5BG012700 Rh5BG028500
rosa_wichuraiana	Rw2G007950 Rw2G007960 Rw2G007970 Rw2G028490 Rw5G000980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1014
Acc16I	TGCGCA	1 cut(s)	945
Acc36I	ACCTGC	1 cut(s)	1014
AccB1I	GGYRCC	2 cut(s)	283, 618
AccI	GTMKAC	1 cut(s)	231
AccII	CGCG	2 cut(s)	202, 437
AccIII	TCCGGA	1 cut(s)	679
AciI	CCGC	4 cut(s)	184, 202, 294, 435
AclWI	GGATC	2 cut(s)	539, 878
AcoI	YGGCCR	1 cut(s)	665
AcsI	RAATTY	3 cut(s)	366, 460, 740
AcuI	CTGAAG	1 cut(s)	345
AfaI	GTAC	2 cut(s)	559, 578
AfiI	CCNNNNNNNGG	7 cut(s)	201, 447, 512, 615, 757, 978, 1097
AgsI	TTSAA	6 cut(s)	170, 213, 459, 596, 898, 934
AjnI	CCWGG	1 cut(s)	547
AjuI	GAANNNNNNNTTGG	2 cut(s)	965, 997
AluBI	AGCT	4 cut(s)	24, 110, 361, 592
AluI	AGCT	4 cut(s)	24, 110, 361, 592
Alw21I	GWGCWC	2 cut(s)	363, 844
Alw26I	GTCTC	3 cut(s)	38, 138, 1050
AlwI	GGATC	2 cut(s)	539, 878
Aor13HI	TCCGGA	1 cut(s)	679
AoxI	GGCC	2 cut(s)	582, 665
ApeKI	GCWGC	2 cut(s)	85, 543
ApoI	RAATTY	3 cut(s)	366, 460, 740
ArsI	GACNNNNNNTTYG	2 cut(s)	464, 496
AspLEI	GCGC	1 cut(s)	946
AsuC2I	CCSGG	1 cut(s)	476
AsuHPI	GGTGA	2 cut(s)	362, 482
BaeGI	GKGCMC	1 cut(s)	623
BanI	GGYRCC	2 cut(s)	283, 618
BanII	GRGCYC	1 cut(s)	363
BauI	CACGAG	1 cut(s)	863
BbsI	GAAGAC	2 cut(s)	177, 246
Bbv12I	GWGCWC	2 cut(s)	363, 844
BbvI	GCAGC	2 cut(s)	97, 555
BccI	CCATC	4 cut(s)	109, 230, 779, 994
BceAI	ACGGC	1 cut(s)	279
BciT130I	CCWGG	1 cut(s)	549
BcnI	CCSGG	1 cut(s)	476
BcoDI	GTCTC	3 cut(s)	38, 138, 1050
BfaI	CTAG	2 cut(s)	335, 1092
BfmI	CTRYAG	2 cut(s)	541, 1045
BfuAI	ACCTGC	1 cut(s)	1014
BisI	GCNGC	2 cut(s)	86, 544
BlsI	GCNGC	2 cut(s)	87, 545
Bme1390I	CCNGG	2 cut(s)	476, 549
BmiI	GGNNCC	4 cut(s)	285, 620, 651, 855
BmrFI	CCNGG	2 cut(s)	476, 549
BmsI	GCATC	3 cut(s)	63, 159, 956
BpiI	GAAGAC	2 cut(s)	177, 246
BpmI	CTGGAG	1 cut(s)	668
BpuMI	CCSGG	1 cut(s)	476
Bsa29I	ATCGAT	2 cut(s)	257, 998
BsaAI	YACGTR	1 cut(s)	580
BsaJI	CCNNGG	2 cut(s)	547, 857
BsaWI	WCCGGW	1 cut(s)	679
BsaXI	ACNNNNNCTCC	4 cut(s)	569, 599, 641, 671
Bsc4I	CCNNNNNNNGG	7 cut(s)	201, 447, 512, 615, 757, 978, 1097
Bse118I	RCCGGY	1 cut(s)	663
Bse1I	ACTGG	1 cut(s)	694
Bse3DI	GCAATG	1 cut(s)	777
BseAI	TCCGGA	1 cut(s)	679
BseBI	CCWGG	1 cut(s)	549
BseCI	ATCGAT	2 cut(s)	257, 998
BseDI	CCNNGG	2 cut(s)	547, 857
BseGI	GGATG	2 cut(s)	54, 910
BseLI	CCNNNNNNNGG	7 cut(s)	201, 447, 512, 615, 757, 978, 1097
BseMI	GCAATG	1 cut(s)	777
BseMII	CTCAG	3 cut(s)	376, 552, 857
BseNI	ACTGG	1 cut(s)	694
BseRI	GAGGAG	1 cut(s)	896
BseSI	GKGCMC	1 cut(s)	623
BseX3I	CGGCCG	1 cut(s)	665
BseXI	GCAGC	2 cut(s)	97, 555
BsgI	GTGCAG	2 cut(s)	1042, 1048
Bsh1236I	CGCG	2 cut(s)	202, 437
Bsh1285I	CGRYCG	3 cut(s)	257, 441, 668
BshFI	GGCC	2 cut(s)	584, 667
BshNI	GGYRCC	2 cut(s)	283, 618
BshVI	ATCGAT	2 cut(s)	257, 998
BsiEI	CGRYCG	3 cut(s)	257, 441, 668
BsiHKAI	GWGCWC	2 cut(s)	363, 844
BsiSI	CCGG	4 cut(s)	476, 653, 664, 680
BslI	CCNNNNNNNGG	7 cut(s)	201, 447, 512, 615, 757, 978, 1097
BsmAI	GTCTC	3 cut(s)	38, 138, 1050
BsmBI	CGTCTC	2 cut(s)	138, 1050
BsmI	GAATGC	1 cut(s)	881
BsnI	GGCC	2 cut(s)	584, 667
Bsp1286I	GDGCHC	3 cut(s)	363, 623, 844
Bsp13I	TCCGGA	1 cut(s)	679
Bsp143I	GATC	5 cut(s)	28, 254, 258, 531, 870
BspACI	CCGC	4 cut(s)	184, 202, 294, 435
BspANI	GGCC	2 cut(s)	584, 667
BspCNI	CTCAG	3 cut(s)	375, 553, 856
BspDI	ATCGAT	2 cut(s)	257, 998
BspEI	TCCGGA	1 cut(s)	679
BspFNI	CGCG	2 cut(s)	202, 437
BspHI	TCATGA	1 cut(s)	1014
BspLI	GGNNCC	4 cut(s)	285, 620, 651, 855
BspMAI	CTGCAG	1 cut(s)	545
BspMI	ACCTGC	1 cut(s)	1014
BspPI	GGATC	2 cut(s)	539, 878
BspT107I	GGYRCC	2 cut(s)	283, 618
BsrDI	GCAATG	1 cut(s)	777
BsrFI	RCCGGY	1 cut(s)	663
BsrI	ACTGG	1 cut(s)	694
BssAI	RCCGGY	1 cut(s)	663
BssECI	CCNNGG	2 cut(s)	547, 857
BssMI	GATC	5 cut(s)	28, 254, 258, 531, 870
BssSI	CACGAG	1 cut(s)	863
BssT1I	CCWWGG	1 cut(s)	857
Bst2BI	CACGAG	1 cut(s)	863
Bst2UI	CCWGG	1 cut(s)	549
Bst4CI	ACNGT	1 cut(s)	350
BstAPI	GCANNNNNTGC	1 cut(s)	618
BstBAI	YACGTR	1 cut(s)	580
BstC8I	GCNNGC	1 cut(s)	665
BstDEI	CTNAG	6 cut(s)	111, 362, 371, 561, 573, 843
BstEII	GGTNACC	1 cut(s)	470
BstF5I	GGATG	2 cut(s)	54, 910
BstFNI	CGCG	2 cut(s)	202, 437
BstHHI	GCGC	1 cut(s)	946
BstKTI	GATC	5 cut(s)	31, 257, 261, 534, 873
BstMAI	GTCTC	3 cut(s)	38, 138, 1050
BstMBI	GATC	5 cut(s)	28, 254, 258, 531, 870
BstMCI	CGRYCG	3 cut(s)	257, 441, 668
BstMWI	GCNNNNNNNGC	2 cut(s)	618, 673
BstNI	CCWGG	1 cut(s)	549
BstNSI	RCATGY	1 cut(s)	1012
BstPI	GGTNACC	1 cut(s)	470
BstSCI	CCNGG	2 cut(s)	474, 547
BstSFI	CTRYAG	2 cut(s)	541, 1045
BstSLI	GKGCMC	1 cut(s)	623
BstUI	CGCG	2 cut(s)	202, 437
BstV1I	GCAGC	2 cut(s)	97, 555
BstV2I	GAAGAC	2 cut(s)	177, 246
BstXI	CCANNNNNNTGG	1 cut(s)	825
BstZI	CGGCCG	1 cut(s)	665
Bsu15I	ATCGAT	2 cut(s)	257, 998
BsuRI	GGCC	2 cut(s)	584, 667
BsuTUI	ATCGAT	2 cut(s)	257, 998
BtsCI	GGATG	2 cut(s)	54, 910
BtsIMutI	CAGTG	3 cut(s)	86, 701, 851
BveI	ACCTGC	1 cut(s)	1014
Cac8I	GCNNGC	1 cut(s)	665
CciI	TCATGA	1 cut(s)	1014
CfoI	GCGC	1 cut(s)	946
Cfr10I	RCCGGY	1 cut(s)	663
ClaI	ATCGAT	2 cut(s)	257, 998
CseI	GACGC	1 cut(s)	487
Csp6I	GTAC	2 cut(s)	558, 577
CviAII	CATG	3 cut(s)	928, 1009, 1015
CviQI	GTAC	2 cut(s)	558, 577
DdeI	CTNAG	6 cut(s)	111, 362, 371, 561, 573, 843
DpnI	GATC	5 cut(s)	30, 256, 260, 533, 872
DpnII	GATC	5 cut(s)	28, 254, 258, 531, 870
DraI	TTTAAA	1 cut(s)	379
EaeI	YGGCCR	1 cut(s)	665
EagI	CGGCCG	1 cut(s)	665
Ecl136II	GAGCTC	1 cut(s)	361
EclXI	CGGCCG	1 cut(s)	665
Eco130I	CCWWGG	1 cut(s)	857
Eco24I	GRGCYC	1 cut(s)	363
Eco32I	GATATC	1 cut(s)	925
Eco52I	CGGCCG	1 cut(s)	665
Eco53kI	GAGCTC	1 cut(s)	361
Eco57I	CTGAAG	1 cut(s)	345
Eco91I	GGTNACC	1 cut(s)	470
EcoICRI	GAGCTC	1 cut(s)	361
EcoO65I	GGTNACC	1 cut(s)	470
EcoRI	GAATTC	1 cut(s)	366
EcoRII	CCWGG	1 cut(s)	547
EcoRV	GATATC	1 cut(s)	925
EcoT14I	CCWWGG	1 cut(s)	857
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	363
ErhI	CCWWGG	1 cut(s)	857
Esp3I	CGTCTC	2 cut(s)	138, 1050
FaeI	CATG	3 cut(s)	931, 1012, 1018
FaiI	YATR	9 cut(s)	6, 569, 638, 756, 929, 987, 1010, 1016, 1077
FatI	CATG	3 cut(s)	927, 1008, 1014
FauI	CCCGC	1 cut(s)	301
FblI	GTMKAC	1 cut(s)	231
Fnu4HI	GCNGC	2 cut(s)	86, 544
FokI	GGATG	2 cut(s)	41, 917
FriOI	GRGCYC	1 cut(s)	363
Fsp4HI	GCNGC	2 cut(s)	86, 544
FspBI	CTAG	2 cut(s)	335, 1092
FspI	TGCGCA	1 cut(s)	945
GlaI	GCGC	1 cut(s)	945
GluI	GCNGC	2 cut(s)	86, 544
GsuI	CTGGAG	1 cut(s)	668
HaeIII	GGCC	2 cut(s)	584, 667
HapII	CCGG	4 cut(s)	476, 653, 664, 680
HgaI	GACGC	1 cut(s)	487
HhaI	GCGC	1 cut(s)	946
Hin1II	CATG	3 cut(s)	931, 1012, 1018
Hin6I	GCGC	1 cut(s)	944
HinP1I	GCGC	1 cut(s)	944
HincII	GTYRAC	1 cut(s)	232
HindII	GTYRAC	1 cut(s)	232
HindIII	AAGCTT	1 cut(s)	590
HinfI	GANTC	6 cut(s)	205, 443, 516, 521, 670, 724
HpaII	CCGG	4 cut(s)	476, 653, 664, 680
HphI	GGTGA	2 cut(s)	362, 482
Hpy166II	GTNNAC	1 cut(s)	232
Hpy188I	TCNGA	9 cut(s)	28, 33, 254, 325, 365, 401, 427, 531, 736
Hpy188III	TCNNGA	5 cut(s)	513, 596, 629, 680, 1015
Hpy8I	GTNNAC	1 cut(s)	232
Hpy99I	CGWCG	5 cut(s)	233, 236, 239, 350, 503
HpyAV	CCTTC	4 cut(s)	34, 190, 219, 406
HpyCH4III	ACNGT	1 cut(s)	350
HpyCH4IV	ACGT	3 cut(s)	228, 579, 1059
HpyCH4V	TGCA	7 cut(s)	4, 543, 707, 770, 1008, 1023, 1029
HpyF10VI	GCNNNNNNNGC	2 cut(s)	618, 673
HpyF3I	CTNAG	6 cut(s)	111, 362, 371, 561, 573, 843
HpySE526I	ACGT	3 cut(s)	228, 579, 1059
Hsp92II	CATG	3 cut(s)	931, 1012, 1018
HspAI	GCGC	1 cut(s)	944
Kpn2I	TCCGGA	1 cut(s)	679
KroI	GCCGGC	1 cut(s)	663
KroNI	GCCGGC	1 cut(s)	665
Kzo9I	GATC	5 cut(s)	28, 254, 258, 531, 870
LmnI	GCTCC	3 cut(s)	29, 649, 859
Lsp1109I	GCAGC	2 cut(s)	97, 555
LweI	GCATC	3 cut(s)	63, 159, 956
MaeI	CTAG	2 cut(s)	335, 1092
MaeII	ACGT	3 cut(s)	228, 579, 1059
MaeIII	GTNAC	1 cut(s)	470
MalI	GATC	5 cut(s)	30, 256, 260, 533, 872
MboI	GATC	5 cut(s)	28, 254, 258, 531, 870
MboII	GAAGA	8 cut(s)	108, 111, 182, 251, 338, 447, 946, 975
MhlI	GDGCHC	3 cut(s)	363, 623, 844
MluCI	AATT	4 cut(s)	366, 460, 740, 820
MlyI	GAGTC	1 cut(s)	530
MmeI	TCCRAC	1 cut(s)	806
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	1 cut(s)	679
MroNI	GCCGGC	1 cut(s)	663
MseI	TTAA	1 cut(s)	378
MslI	CAYNNNNRTG	1 cut(s)	1013
MspI	CCGG	4 cut(s)	476, 653, 664, 680
MspR9I	CCNGG	2 cut(s)	476, 549
MssI	GTTTAAAC	1 cut(s)	379
Mva1269I	GAATGC	1 cut(s)	881
MvaI	CCWGG	1 cut(s)	549
MvnI	CGCG	2 cut(s)	202, 437
MwoI	GCNNNNNNNGC	2 cut(s)	618, 673
NaeI	GCCGGC	1 cut(s)	665
NciI	CCSGG	1 cut(s)	476
NdeII	GATC	5 cut(s)	28, 254, 258, 531, 870
NgoMIV	GCCGGC	1 cut(s)	663
NlaIII	CATG	3 cut(s)	931, 1012, 1018
NlaIV	GGNNCC	4 cut(s)	285, 620, 651, 855
NmuCI	GTSAC	1 cut(s)	470
NsbI	TGCGCA	1 cut(s)	945
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	1012
PagI	TCATGA	1 cut(s)	1014
PaqCI	CACCTGC	1 cut(s)	1014
PcsI	WCGNNNNNNNCGW	3 cut(s)	234, 354, 870
PctI	GAATGC	1 cut(s)	881
PdiI	GCCGGC	1 cut(s)	665
PfeI	GAWTC	5 cut(s)	205, 443, 516, 670, 724
PkrI	GCNGC	2 cut(s)	87, 545
Ple19I	CGATCG	1 cut(s)	257
PleI	GAGTC	1 cut(s)	529
PmeI	GTTTAAAC	1 cut(s)	379
PpsI	GAGTC	1 cut(s)	529
Ppu21I	YACGTR	1 cut(s)	580
Psp124BI	GAGCTC	1 cut(s)	363
Psp6I	CCWGG	1 cut(s)	547
PspEI	GGTNACC	1 cut(s)	470
PspGI	CCWGG	1 cut(s)	547
PspN4I	GGNNCC	4 cut(s)	285, 620, 651, 855
PstI	CTGCAG	1 cut(s)	545
PvuI	CGATCG	1 cut(s)	257
RsaI	GTAC	2 cut(s)	559, 578
RsaNI	GTAC	2 cut(s)	558, 577
RseI	CAYNNNNRTG	1 cut(s)	1013
SacI	GAGCTC	1 cut(s)	363
SalI	GTCGAC	1 cut(s)	230
SaqAI	TTAA	1 cut(s)	378
SatI	GCNGC	2 cut(s)	86, 544
Sau3AI	GATC	5 cut(s)	28, 254, 258, 531, 870
SchI	GAGTC	1 cut(s)	530
ScrFI	CCNGG	2 cut(s)	476, 549
SduI	GDGCHC	3 cut(s)	363, 623, 844
SfaNI	GCATC	3 cut(s)	63, 159, 956
SfcI	CTRYAG	2 cut(s)	541, 1045
SgrDI	CGTCGACG	1 cut(s)	230
SmiMI	CAYNNNNRTG	1 cut(s)	1013
Sse9I	AATT	4 cut(s)	366, 460, 740, 820
SsiI	CCGC	4 cut(s)	184, 202, 294, 435
SspMI	CTAG	2 cut(s)	335, 1092
SstI	GAGCTC	1 cut(s)	363
StyD4I	CCNGG	2 cut(s)	474, 547
StyI	CCWWGG	1 cut(s)	857
TaaI	ACNGT	1 cut(s)	350
TaiI	ACGT	3 cut(s)	231, 582, 1062
TaqII	GACCGA	1 cut(s)	455
TasI	AATT	4 cut(s)	366, 460, 740, 820
TatI	WGTACW	1 cut(s)	557
TfiI	GAWTC	5 cut(s)	205, 443, 516, 670, 724
Tru1I	TTAA	1 cut(s)	378
Tru9I	TTAA	1 cut(s)	378
TscAI	CASTG	3 cut(s)	86, 701, 851
TseFI	GTSAC	1 cut(s)	470
TseI	GCWGC	2 cut(s)	85, 543
Tsp45I	GTSAC	1 cut(s)	470
TspDTI	ATGAA	2 cut(s)	1003, 1064
TspRI	CASTG	3 cut(s)	86, 701, 851
XapI	RAATTY	3 cut(s)	366, 460, 740
XceI	RCATGY	1 cut(s)	1012
XmiI	GTMKAC	1 cut(s)	231
XspI	CTAG	2 cut(s)	335, 1092
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.