Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000271

Physical Location & Seq

Genomic Coordinates Reverse (-)

83720410 .. 83721327

Gene Structure 918 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00145830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 918 bp

ATGCTCACCTCCAAGCCCTCTCACTCTCACTCTCACTCTCCAATTCAAATTCTCACCGTCGACGAGGACGACGCCGGCGCTGACGTCATCTTCCCTCCGATTCCCCACAGCTCCTCATCCGCCGCGATCGCCCTCAACGACGATCGAAAAGACCCATCTGCCCGCAGACCATCTCCCTCCCCAACCAAAGTACCCACCTTTATCGACCTCTCCGACGAACCCGACGACGGAGACGACGACGAGATTCGGATTCTCCGATTCAAACCCACCAAAACCCACTTCAAAAAGAGAAGAACAAACCCGTTTACATCCGGGTCCGTATCCGAACCCGGCCAGTCCTCCTCCGATTCTCTCACCGACTACCCACCATTCGTCTGTGATATTTGCGCCGACGACAAGCTCGGGTACCAATCTTTTCCGATCGAGAATTGCAACCATGTGTATTGCTCCGATTGTGTGATCAACTACATCGATTACAAGCTCCAAGAAAACGAACCCACAATTCGGTGCCCTGTTCCGGGGTGCAAGGGTCTGCTGGAGCCCGAGTACTGCCGCTCGGTTCTGCCGGCTCAGGTGTTTGCGAGGTGGGGAAAGGCAATGTGTGATGCTGTGATACTCGGGTCGGAGAAATTCTACTGCCCATATCAGGACTGCTCTGCTCTGCTGATCAACGACGGGGAGGAGGTGGTGAGGGAGTCGCAGTGCCCGCATTGTGGGAGAATGTTTTGTGCTCAGTGCAAGGTTGCTTGGCATGTTGGGATGGATTGCAGCGAGTTTCAGAGGCTGAGTGTGGATGAGAGAGGGAATGAAGATGTTATGTTGAGGAACCTGGCGCAGAGCCAGAACTGGAGGAGGTGTCCCAGCTGCATGTTCTATGTCGAAAAGTCTGTTGGTTGCTCCTACATGAAATGCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0012505 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR zf-C3HC4

Protein Analysis

305

Amino Acids

34.23

Weight (kDa)

5.22

Isoelectric Point (pI)

61.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	204 - 256	1.7e-10	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000271)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14250
fragaria_vesca	FvH4_1g09490 FvH4_1g09500 FvH4_1g09500 FvH4_1g09510 FvH4_3g00870 FvH4_3g03010 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g35700 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220
malus_domestica	MD02G1102400.v1.1 MD02G1103700.v1.1 MD03G1111900.v1.1 MD09G1173800.v1.1 MD09G1230900.v1.1 MD09G1231400.v1.1 MD15G1224200.v1.1
prunus_persica	Prupe.3G031900_v2.0.a1 Prupe.3G107200_v2.0.a1 Prupe.7G191200_v2.0.a1 Prupe.7G191800_v2.0.a1 Prupe.8G007700_v2.0.a1
pyrus_communis	pycom02g08010 pycom02g08140 pycom09g14980 pycom09g15030 pycom15g19900
rosa_chinensis	RchiOBHm_Chr2g0096041 RchiOBHm_Chr2g0096051 RchiOBHm_Chr2g0096061 RchiOBHm_Chr2g0096071 RchiOBHm_Chr2g0096081 RchiOBHm_Chr2g0096221 RchiOBHm_Chr2g0131511 RchiOBHm_Chr2g0147691 RchiOBHm_Chr5g0001281 RchiOBHm_Chr5g0001301
rosa_laevigata	RLG00000016619 RLG00000016620 RLG00000016621 RLG00000016622 RLG00000019200 RLG00000020271 RLG00000025410 RLG00000030919 RLG00000031102 RLG00000031117 RLG00000031119 RLG00000031120
rosa_multiflora	Rmu_co8160592.1_g000001 Rmu_sc0001706.1_g000008 Rmu_sc0002494.1_g000005 Rmu_sc0004189.1_g000040 Rmu_sc0005612.1_g000008 Rmu_sc0005612.1_g000011 Rmu_sc0005612.1_g000012 Rmu_sc0006926.1_g000015 Rmu_sc0013257.1_g000002 Rmu_sc0034363.1_g000001 Rmu_sc0034363.1_g000002
rosa_roxburghii	Rroxscaffold_1G00072690 Rroxscaffold_1G00075020 Rroxscaffold_2G00145780 Rroxscaffold_2G00145790 Rroxscaffold_2G00145800 Rroxscaffold_2G00145810 Rroxscaffold_2G00145820 Rroxscaffold_2G00145830 Rroxscaffold_4G00300930 Rroxscaffold_6G00424750
rosa_rugosa	Rorug02G0056000 Rorug02G0056100 Rorug02G0056200 Rorug02G0056300 Rorug02G0056500 Rorug02G0056700 Rorug02G0298000.1 Rorug02G0400900 Rorug02G0401000 Rorug02G0401100 Rorug04G0389500 Rorug04G0389600 Rorug04G0389700 Rorug04G0402300
rosa_samantha	Rh2AG103800 Rh2AG458300 Rh2BG105400 Rh2BG105500 Rh2BG105600 Rh2BG105700 Rh2BG105900 Rh2BG357600 Rh2BG471000 Rh2DG106000 Rh2DG106100 Rh2DG106200 Rh2DG106300 Rh2DG106500 Rh2DG375400 Rh2DG480300 Rh5AG009500 Rh5AG009600 Rh5AG010000 Rh5AG028300 Rh5BG012400 Rh5BG012500 Rh5BG012700 Rh5BG028500
rosa_wichuraiana	Rw2G007950 Rw2G007960 Rw2G007970 Rw2G028490 Rw5G000980

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	903
AatII	GACGTC	1 cut(s)	87
Acc36I	ACCTGC	1 cut(s)	903
Acc65I	GGTACC	1 cut(s)	405
AccB1I	GGYRCC	2 cut(s)	405, 507
AccBSI	CCGCTC	1 cut(s)	555
AccI	GTMKAC	1 cut(s)	60
AccII	CGCG	1 cut(s)	125
AciI	CCGC	5 cut(s)	120, 123, 163, 553, 707
AcoI	YGGCCR	1 cut(s)	331
AcsI	RAATTY	2 cut(s)	48, 629
AcyI	GRCGYC	2 cut(s)	72, 84
AfaI	GTAC	3 cut(s)	192, 407, 548
AfiI	CCNNNNNNNGG	6 cut(s)	227, 504, 517, 518, 646, 713
AgsI	TTSAA	3 cut(s)	47, 262, 283
AjnI	CCWGG	1 cut(s)	828
AjuI	GAANNNNNNNTTGG	4 cut(s)	263, 295, 873, 905
AluBI	AGCT	4 cut(s)	111, 400, 481, 864
AluI	AGCT	4 cut(s)	111, 400, 481, 864
Alw21I	GWGCWC	1 cut(s)	733
Alw26I	GTCTC	1 cut(s)	225
AlwNI	CAGNNNCTG	1 cut(s)	784
Ama87I	CYCGRG	3 cut(s)	401, 542, 617
AoxI	GGCC	1 cut(s)	331
ApeKI	GCWGC	2 cut(s)	768, 864
ApoI	RAATTY	2 cut(s)	48, 629
AsiSI	GCGATCGC	1 cut(s)	129
Asp718I	GGTACC	1 cut(s)	405
AspLEI	GCGC	3 cut(s)	80, 389, 835
AspS9I	GGNCC	1 cut(s)	315
AsuC2I	CCSGG	3 cut(s)	313, 330, 519
AsuHPI	GGTGA	3 cut(s)	46, 346, 700
AvaI	CYCGRG	3 cut(s)	401, 542, 617
AvaII	GGWCC	1 cut(s)	315
BaeGI	GKGCMC	2 cut(s)	512, 707
BaeI	ACNNNNGTAYC	4 cut(s)	174, 207, 605, 638
BanI	GGYRCC	2 cut(s)	405, 507
BanII	GRGCYC	1 cut(s)	543
Bbv12I	GWGCWC	1 cut(s)	733
BbvI	GCAGC	2 cut(s)	780, 851
BccI	CCATC	3 cut(s)	163, 178, 754
BciT130I	CCWGG	1 cut(s)	830
BciVI	GTATCC	1 cut(s)	331
BclI	TGATCA	2 cut(s)	459, 666
BcnI	CCSGG	3 cut(s)	313, 330, 519
BcoDI	GTCTC	1 cut(s)	225
BfoI	RGCGCY	1 cut(s)	81
BfuAI	ACCTGC	1 cut(s)	903
BfuI	GTATCC	1 cut(s)	331
BisI	GCNGC	4 cut(s)	123, 553, 769, 865
BlsI	GCNGC	4 cut(s)	124, 554, 770, 866
BmcAI	AGTACT	1 cut(s)	548
Bme1390I	CCNGG	4 cut(s)	313, 330, 519, 830
Bme18I	GGWCC	1 cut(s)	315
BmeT110I	CYCGRG	3 cut(s)	401, 542, 617
BmgT120I	GGNCC	1 cut(s)	315
BmiI	GGNNCC	5 cut(s)	316, 407, 509, 540, 827
BmrFI	CCNGG	4 cut(s)	313, 330, 519, 830
BmsI	GCATC	1 cut(s)	595
BpmI	CTGGAG	2 cut(s)	557, 868
Bpu10I	CCTNAGC	1 cut(s)	570
BpuMI	CCSGG	3 cut(s)	313, 330, 519
Bsa29I	ATCGAT	1 cut(s)	471
BsaHI	GRCGYC	2 cut(s)	72, 84
BsaJI	CCNNGG	1 cut(s)	518
BsaXI	ACNNNNNCTCC	6 cut(s)	530, 560, 686, 716, 841, 871
Bsc4I	CCNNNNNNNGG	6 cut(s)	227, 504, 517, 518, 646, 713
Bse118I	RCCGGY	2 cut(s)	74, 565
Bse1I	ACTGG	2 cut(s)	334, 851
Bse3DI	GCAATG	1 cut(s)	603
BseBI	CCWGG	1 cut(s)	830
BseCI	ATCGAT	1 cut(s)	471
BseDI	CCNNGG	1 cut(s)	518
BseGI	GGATG	4 cut(s)	116, 308, 765, 799
BseLI	CCNNNNNNNGG	6 cut(s)	227, 504, 517, 518, 646, 713
BseMI	GCAATG	1 cut(s)	603
BseMII	CTCAG	3 cut(s)	584, 746, 776
BseNI	ACTGG	2 cut(s)	334, 851
BseRI	GAGGAG	4 cut(s)	103, 331, 695, 865
BseSI	GKGCMC	2 cut(s)	512, 707
BseXI	GCAGC	2 cut(s)	780, 851
BseYI	CCCAGC	1 cut(s)	860
Bsh1236I	CGCG	1 cut(s)	125
Bsh1285I	CGRYCG	3 cut(s)	129, 145, 423
BshFI	GGCC	1 cut(s)	333
BshNI	GGYRCC	2 cut(s)	405, 507
BshVI	ATCGAT	1 cut(s)	471
BsiEI	CGRYCG	3 cut(s)	129, 145, 423
BsiHKAI	GWGCWC	1 cut(s)	733
BsiHKCI	CYCGRG	3 cut(s)	401, 542, 617
BsiSI	CCGG	5 cut(s)	75, 312, 330, 518, 566
BslFI	GGGAC	1 cut(s)	843
BslI	CCNNNNNNNGG	6 cut(s)	227, 504, 517, 518, 646, 713
BsmAI	GTCTC	1 cut(s)	225
BsmBI	CGTCTC	1 cut(s)	225
BsmFI	GGGAC	1 cut(s)	843
BsnI	GGCC	1 cut(s)	333
BsoBI	CYCGRG	3 cut(s)	401, 542, 617
Bsp1286I	GDGCHC	4 cut(s)	512, 543, 707, 733
Bsp143I	GATC	5 cut(s)	126, 142, 420, 459, 666
BspACI	CCGC	5 cut(s)	120, 123, 163, 553, 707
BspANI	GGCC	1 cut(s)	333
BspCNI	CTCAG	3 cut(s)	583, 745, 777
BspDI	ATCGAT	1 cut(s)	471
BspFNI	CGCG	1 cut(s)	125
BspLI	GGNNCC	5 cut(s)	316, 407, 509, 540, 827
BspMI	ACCTGC	1 cut(s)	903
BspT107I	GGYRCC	2 cut(s)	405, 507
BsrBI	CCGCTC	1 cut(s)	555
BsrDI	GCAATG	1 cut(s)	603
BsrFI	RCCGGY	2 cut(s)	74, 565
BsrI	ACTGG	2 cut(s)	334, 851
BssAI	RCCGGY	2 cut(s)	74, 565
BssECI	CCNNGG	1 cut(s)	518
BssMI	GATC	5 cut(s)	126, 142, 420, 459, 666
BssNI	GRCGYC	2 cut(s)	72, 84
Bst2UI	CCWGG	1 cut(s)	830
Bst4CI	ACNGT	1 cut(s)	58
BstACI	GRCGYC	2 cut(s)	72, 84
BstC8I	GCNNGC	4 cut(s)	76, 163, 567, 707
BstDEI	CTNAG	3 cut(s)	570, 732, 785
BstF5I	GGATG	4 cut(s)	116, 308, 765, 799
BstFNI	CGCG	1 cut(s)	125
BstH2I	RGCGCY	1 cut(s)	81
BstHHI	GCGC	3 cut(s)	80, 389, 835
BstKTI	GATC	5 cut(s)	129, 145, 423, 462, 669
BstMAI	GTCTC	1 cut(s)	225
BstMBI	GATC	5 cut(s)	126, 142, 420, 459, 666
BstMCI	CGRYCG	3 cut(s)	129, 145, 423
BstMWI	GCNNNNNNNGC	2 cut(s)	128, 706
BstNI	CCWGG	1 cut(s)	830
BstNSI	RCATGY	2 cut(s)	755, 871
BstSCI	CCNGG	4 cut(s)	311, 328, 517, 828
BstSLI	GKGCMC	2 cut(s)	512, 707
BstUI	CGCG	1 cut(s)	125
BstV1I	GCAGC	2 cut(s)	780, 851
Bsu15I	ATCGAT	1 cut(s)	471
BsuI	GTATCC	1 cut(s)	331
BsuRI	GGCC	1 cut(s)	333
BsuTUI	ATCGAT	1 cut(s)	471
BtsCI	GGATG	4 cut(s)	116, 308, 765, 799
BtsI	GCAGTG	1 cut(s)	707
BtsIMutI	CAGTG	2 cut(s)	707, 740
BveI	ACCTGC	1 cut(s)	903
Cac8I	GCNNGC	4 cut(s)	76, 163, 567, 707
CaiI	CAGNNNCTG	1 cut(s)	784
CfoI	GCGC	3 cut(s)	80, 389, 835
Cfr10I	RCCGGY	2 cut(s)	74, 565
Cfr13I	GGNCC	1 cut(s)	315
ClaI	ATCGAT	1 cut(s)	471
CseI	GACGC	1 cut(s)	80
Csp6I	GTAC	3 cut(s)	191, 406, 547
CviAII	CATG	4 cut(s)	437, 752, 868, 904
CviQI	GTAC	3 cut(s)	191, 406, 547
DdeI	CTNAG	3 cut(s)	570, 732, 785
DpnI	GATC	5 cut(s)	128, 144, 422, 461, 668
DpnII	GATC	5 cut(s)	126, 142, 420, 459, 666
EaeI	YGGCCR	1 cut(s)	331
EciI	GGCGGA	1 cut(s)	109
Eco24I	GRGCYC	1 cut(s)	543
Eco47I	GGWCC	1 cut(s)	315
Eco88I	CYCGRG	3 cut(s)	401, 542, 617
EcoRII	CCWGG	1 cut(s)	828
EcoT38I	GRGCYC	1 cut(s)	543
Esp3I	CGTCTC	1 cut(s)	225
FaeI	CATG	4 cut(s)	440, 755, 871, 907
FaiI	YATR	7 cut(s)	438, 643, 753, 818, 869, 876, 905
FaqI	GGGAC	1 cut(s)	843
FatI	CATG	4 cut(s)	436, 751, 867, 903
FauI	CCCGC	2 cut(s)	170, 714
FbaI	TGATCA	2 cut(s)	459, 666
FblI	GTMKAC	1 cut(s)	60
Fnu4HI	GCNGC	4 cut(s)	123, 553, 769, 865
FokI	GGATG	4 cut(s)	103, 295, 772, 806
FriOI	GRGCYC	1 cut(s)	543
Fsp4HI	GCNGC	4 cut(s)	123, 553, 769, 865
GlaI	GCGC	3 cut(s)	79, 388, 834
GluI	GCNGC	4 cut(s)	123, 553, 769, 865
GsaI	CCCAGC	1 cut(s)	864
GsuI	CTGGAG	2 cut(s)	557, 868
HaeII	RGCGCY	1 cut(s)	81
HaeIII	GGCC	1 cut(s)	333
HapII	CCGG	5 cut(s)	75, 312, 330, 518, 566
HgaI	GACGC	1 cut(s)	80
HhaI	GCGC	3 cut(s)	80, 389, 835
Hin1I	GRCGYC	2 cut(s)	72, 84
Hin1II	CATG	4 cut(s)	440, 755, 871, 907
Hin6I	GCGC	3 cut(s)	78, 387, 833
HinP1I	GCGC	3 cut(s)	78, 387, 833
HincII	GTYRAC	1 cut(s)	61
HindII	GTYRAC	1 cut(s)	61
HinfI	GANTC	6 cut(s)	100, 244, 250, 258, 347, 695
HpaII	CCGG	5 cut(s)	75, 312, 330, 518, 566
HphI	GGTGA	3 cut(s)	46, 346, 700
Hpy166II	GTNNAC	2 cut(s)	61, 306
Hpy188III	TCNNGA	2 cut(s)	424, 647
Hpy8I	GTNNAC	2 cut(s)	61, 306
HpyCH4III	ACNGT	1 cut(s)	58
HpyCH4IV	ACGT	1 cut(s)	84
HpyCH4V	TGCA	6 cut(s)	432, 525, 738, 768, 867, 912
HpyF10VI	GCNNNNNNNGC	2 cut(s)	128, 706
HpyF3I	CTNAG	3 cut(s)	570, 732, 785
HpySE526I	ACGT	1 cut(s)	84
Hsp92I	GRCGYC	2 cut(s)	72, 84
Hsp92II	CATG	4 cut(s)	440, 755, 871, 907
HspAI	GCGC	3 cut(s)	78, 387, 833
KpnI	GGTACC	1 cut(s)	409
KroI	GCCGGC	2 cut(s)	74, 565
KroNI	GCCGGC	2 cut(s)	76, 567
Ksp22I	TGATCA	2 cut(s)	459, 666
Kzo9I	GATC	5 cut(s)	126, 142, 420, 459, 666
LmnI	GCTCC	5 cut(s)	116, 452, 486, 538, 902
Lsp1109I	GCAGC	2 cut(s)	780, 851
LweI	GCATC	1 cut(s)	595
MaeII	ACGT	1 cut(s)	84
MalI	GATC	5 cut(s)	128, 144, 422, 461, 668
MbiI	CCGCTC	1 cut(s)	555
MboI	GATC	5 cut(s)	126, 142, 420, 459, 666
MboII	GAAGA	3 cut(s)	82, 303, 821
MhlI	GDGCHC	4 cut(s)	512, 543, 707, 733
MluCI	AATT	5 cut(s)	42, 48, 427, 501, 629
MlyI	GAGTC	1 cut(s)	704
MmeI	TCCRAC	2 cut(s)	237, 603
MreI	CGCCGGCG	1 cut(s)	74
MroNI	GCCGGC	2 cut(s)	74, 565
MspA1I	CMGCKG	1 cut(s)	864
MspI	CCGG	5 cut(s)	75, 312, 330, 518, 566
MspR9I	CCNGG	4 cut(s)	313, 330, 519, 830
MvaI	CCWGG	1 cut(s)	830
MvnI	CGCG	1 cut(s)	125
MwoI	GCNNNNNNNGC	2 cut(s)	128, 706
NaeI	GCCGGC	2 cut(s)	76, 567
NciI	CCSGG	3 cut(s)	313, 330, 519
NdeII	GATC	5 cut(s)	126, 142, 420, 459, 666
NgoMIV	GCCGGC	2 cut(s)	74, 565
NlaIII	CATG	4 cut(s)	440, 755, 871, 907
NlaIV	GGNNCC	5 cut(s)	316, 407, 509, 540, 827
NspI	RCATGY	2 cut(s)	755, 871
PaqCI	CACCTGC	1 cut(s)	903
PcsI	WCGNNNNNNNCGW	7 cut(s)	66, 135, 210, 222, 231, 234, 253
PdiI	GCCGGC	2 cut(s)	76, 567
PfeI	GAWTC	5 cut(s)	100, 244, 250, 258, 347
PkrI	GCNGC	4 cut(s)	124, 554, 770, 866
Ple19I	CGATCG	3 cut(s)	129, 145, 423
PleI	GAGTC	1 cut(s)	703
PpsI	GAGTC	1 cut(s)	703
Psp6I	CCWGG	1 cut(s)	828
PspFI	CCCAGC	1 cut(s)	860
PspGI	CCWGG	1 cut(s)	828
PspN4I	GGNNCC	5 cut(s)	316, 407, 509, 540, 827
PspPI	GGNCC	1 cut(s)	315
PstNI	CAGNNNCTG	1 cut(s)	784
PvuI	CGATCG	3 cut(s)	129, 145, 423
PvuII	CAGCTG	1 cut(s)	864
RgaI	GCGATCGC	1 cut(s)	129
RsaI	GTAC	3 cut(s)	192, 407, 548
RsaNI	GTAC	3 cut(s)	191, 406, 547
SalI	GTCGAC	1 cut(s)	59
SatI	GCNGC	4 cut(s)	123, 553, 769, 865
Sau3AI	GATC	5 cut(s)	126, 142, 420, 459, 666
Sau96I	GGNCC	1 cut(s)	315
ScaI	AGTACT	1 cut(s)	548
SchI	GAGTC	1 cut(s)	704
ScrFI	CCNGG	4 cut(s)	313, 330, 519, 830
SduI	GDGCHC	4 cut(s)	512, 543, 707, 733
SfaAI	GCGATCGC	1 cut(s)	129
SfaNI	GCATC	1 cut(s)	595
SgfI	GCGATCGC	1 cut(s)	129
SgrAI	CRCCGGYG	1 cut(s)	74
SgrDI	CGTCGACG	1 cut(s)	59
SinI	GGWCC	1 cut(s)	315
Sse9I	AATT	5 cut(s)	42, 48, 427, 501, 629
SsiI	CCGC	5 cut(s)	120, 123, 163, 553, 707
StyD4I	CCNGG	4 cut(s)	311, 328, 517, 828
TaaI	ACNGT	1 cut(s)	58
TaiI	ACGT	1 cut(s)	87
TaqI	TCGA	6 cut(s)	60, 145, 204, 423, 471, 879
TasI	AATT	5 cut(s)	42, 48, 427, 501, 629
TatI	WGTACW	1 cut(s)	546
TauI	GCSGC	2 cut(s)	125, 555
TfiI	GAWTC	5 cut(s)	100, 244, 250, 258, 347
TscAI	CASTG	2 cut(s)	707, 740
TseI	GCWGC	2 cut(s)	768, 864
TspDTI	ATGAA	1 cut(s)	822
TspGWI	ACGGA	2 cut(s)	243, 307
TspRI	CASTG	2 cut(s)	707, 740
VpaK11BI	GGWCC	1 cut(s)	315
XapI	RAATTY	2 cut(s)	48, 629
XceI	RCATGY	2 cut(s)	755, 871
XmiI	GTMKAC	1 cut(s)	60
ZraI	GACGTC	1 cut(s)	85
ZrmI	AGTACT	1 cut(s)	548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.