E3 ubiquitin-protein ligase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 296, 309 |
| AcsI | RAATTY | 1 cut(s) | 283 |
| AgsI | TTSAA | 3 cut(s) | 146, 224, 349 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 87, 119 |
| AluBI | AGCT | 4 cut(s) | 24, 80, 142, 249 |
| AluI | AGCT | 4 cut(s) | 24, 80, 142, 249 |
| AlwI | GGATC | 2 cut(s) | 296, 309 |
| AoxI | GGCC | 1 cut(s) | 150 |
| ApeKI | GCWGC | 2 cut(s) | 21, 139 |
| ApoI | RAATTY | 1 cut(s) | 283 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 102 |
| AspS9I | GGNCC | 1 cut(s) | 151 |
| AsuII | TTCGAA | 1 cut(s) | 281 |
| BamHI | GGATCC | 1 cut(s) | 301 |
| BbvI | GCAGC | 2 cut(s) | 33, 151 |
| BccI | CCATC | 1 cut(s) | 116 |
| BclI | TGATCA | 1 cut(s) | 46 |
| BfaI | CTAG | 1 cut(s) | 246 |
| BisI | GCNGC | 2 cut(s) | 22, 140 |
| BlsI | GCNGC | 2 cut(s) | 23, 141 |
| BmgT120I | GGNCC | 1 cut(s) | 151 |
| BmiI | GGNNCC | 1 cut(s) | 303 |
| BmsI | GCATC | 1 cut(s) | 20 |
| Bpu14I | TTCGAA | 1 cut(s) | 281 |
| BsaBI | GATNNNNATC | 1 cut(s) | 48 |
| BsaJI | CCNNGG | 1 cut(s) | 321 |
| Bse8I | GATNNNNATC | 1 cut(s) | 48 |
| BseDI | CCNNGG | 1 cut(s) | 321 |
| BseGI | GGATG | 3 cut(s) | 10, 28, 331 |
| BseJI | GATNNNNATC | 1 cut(s) | 48 |
| BseMII | CTCAG | 2 cut(s) | 90, 330 |
| BseXI | GCAGC | 2 cut(s) | 33, 151 |
| BsgI | GTGCAG | 1 cut(s) | 150 |
| BshFI | GGCC | 1 cut(s) | 152 |
| BslFI | GGGAC | 1 cut(s) | 249 |
| BsmFI | GGGAC | 1 cut(s) | 249 |
| BsnI | GGCC | 1 cut(s) | 152 |
| Bsp119I | TTCGAA | 1 cut(s) | 281 |
| Bsp143I | GATC | 3 cut(s) | 46, 267, 301 |
| Bsp19I | CCATGG | 1 cut(s) | 321 |
| BspANI | GGCC | 1 cut(s) | 152 |
| BspCNI | CTCAG | 2 cut(s) | 89, 331 |
| BspLI | GGNNCC | 1 cut(s) | 303 |
| BspPI | GGATC | 2 cut(s) | 296, 309 |
| BspT104I | TTCGAA | 1 cut(s) | 281 |
| BssECI | CCNNGG | 1 cut(s) | 321 |
| BssMI | GATC | 3 cut(s) | 46, 267, 301 |
| BssT1I | CCWWGG | 1 cut(s) | 321 |
| BstBI | TTCGAA | 1 cut(s) | 281 |
| BstDEI | CTNAG | 2 cut(s) | 76, 339 |
| BstDSI | CCRYGG | 1 cut(s) | 321 |
| BstF5I | GGATG | 3 cut(s) | 10, 28, 331 |
| BstKTI | GATC | 3 cut(s) | 49, 270, 304 |
| BstMBI | GATC | 3 cut(s) | 46, 267, 301 |
| BstV1I | GCAGC | 2 cut(s) | 33, 151 |
| BstX2I | RGATCY | 1 cut(s) | 301 |
| BstYI | RGATCY | 1 cut(s) | 301 |
| BsuRI | GGCC | 1 cut(s) | 152 |
| BtgI | CCRYGG | 1 cut(s) | 321 |
| BtsCI | GGATG | 3 cut(s) | 10, 28, 331 |
| Cfr13I | GGNCC | 1 cut(s) | 151 |
| CviAII | CATG | 4 cut(s) | 86, 157, 265, 322 |
| CviJI | RGCY | 6 cut(s) | 24, 80, 142, 152, 249, 296 |
| CviKI_1 | RGCY | 6 cut(s) | 24, 80, 142, 152, 249, 296 |
| DdeI | CTNAG | 2 cut(s) | 76, 339 |
| DpnI | GATC | 3 cut(s) | 48, 269, 303 |
| DpnII | GATC | 3 cut(s) | 46, 267, 301 |
| Eco130I | CCWWGG | 1 cut(s) | 321 |
| EcoO109I | RGGNCCY | 1 cut(s) | 151 |
| EcoT14I | CCWWGG | 1 cut(s) | 321 |
| ErhI | CCWWGG | 1 cut(s) | 321 |
| FaeI | CATG | 4 cut(s) | 89, 160, 268, 325 |
| FaiI | YATR | 6 cut(s) | 87, 126, 158, 266, 293, 323 |
| FaqI | GGGAC | 1 cut(s) | 249 |
| FatI | CATG | 4 cut(s) | 85, 156, 264, 321 |
| FbaI | TGATCA | 1 cut(s) | 46 |
| Fnu4HI | GCNGC | 2 cut(s) | 22, 140 |
| FokI | GGATG | 3 cut(s) | 15, 17, 338 |
| Fsp4HI | GCNGC | 2 cut(s) | 22, 140 |
| FspBI | CTAG | 1 cut(s) | 246 |
| GluI | GCNGC | 2 cut(s) | 22, 140 |
| HaeIII | GGCC | 1 cut(s) | 152 |
| Hin1II | CATG | 4 cut(s) | 89, 160, 268, 325 |
| HinfI | GANTC | 1 cut(s) | 278 |
| Hpy188I | TCNGA | 3 cut(s) | 43, 115, 179 |
| Hpy188III | TCNNGA | 2 cut(s) | 146, 252 |
| HpyCH4V | TGCA | 3 cut(s) | 139, 167, 264 |
| HpyF3I | CTNAG | 2 cut(s) | 76, 339 |
| Hsp92II | CATG | 4 cut(s) | 89, 160, 268, 325 |
| Ksp22I | TGATCA | 1 cut(s) | 46 |
| Kzo9I | GATC | 3 cut(s) | 46, 267, 301 |
| LpnPI | CCDG | 1 cut(s) | 237 |
| Lsp1109I | GCAGC | 2 cut(s) | 33, 151 |
| LweI | GCATC | 1 cut(s) | 20 |
| MaeI | CTAG | 1 cut(s) | 246 |
| MalI | GATC | 3 cut(s) | 48, 269, 303 |
| MboI | GATC | 3 cut(s) | 46, 267, 301 |
| MboII | GAAGA | 1 cut(s) | 234 |
| MfeI | CAATTG | 1 cut(s) | 306 |
| MflI | RGATCY | 1 cut(s) | 301 |
| MluCI | AATT | 4 cut(s) | 186, 283, 306, 315 |
| MmeI | TCCRAC | 1 cut(s) | 184 |
| MnlI | CCTC | 3 cut(s) | 142, 164, 172 |
| MroXI | GAANNNNTTC | 1 cut(s) | 102 |
| MunI | CAATTG | 1 cut(s) | 306 |
| NcoI | CCATGG | 1 cut(s) | 321 |
| NdeII | GATC | 3 cut(s) | 46, 267, 301 |
| NlaIII | CATG | 4 cut(s) | 89, 160, 268, 325 |
| NlaIV | GGNNCC | 1 cut(s) | 303 |
| NspV | TTCGAA | 1 cut(s) | 281 |
| PdmI | GAANNNNTTC | 1 cut(s) | 102 |
| PfeI | GAWTC | 1 cut(s) | 278 |
| PkrI | GCNGC | 2 cut(s) | 23, 141 |
| PspN4I | GGNNCC | 1 cut(s) | 303 |
| PspPI | GGNCC | 1 cut(s) | 151 |
| PsuI | RGATCY | 1 cut(s) | 301 |
| SatI | GCNGC | 2 cut(s) | 22, 140 |
| Sau3AI | GATC | 3 cut(s) | 46, 267, 301 |
| Sau96I | GGNCC | 1 cut(s) | 151 |
| SetI | ASST | 5 cut(s) | 26, 82, 144, 251, 355 |
| SfaNI | GCATC | 1 cut(s) | 20 |
| SfuI | TTCGAA | 1 cut(s) | 281 |
| Sse9I | AATT | 4 cut(s) | 186, 283, 306, 315 |
| SspI | AATATT | 1 cut(s) | 37 |
| SspMI | CTAG | 1 cut(s) | 246 |
| StyI | CCWWGG | 1 cut(s) | 321 |
| TaqI | TCGA | 2 cut(s) | 60, 281 |
| TasI | AATT | 4 cut(s) | 186, 283, 306, 315 |
| TfiI | GAWTC | 1 cut(s) | 278 |
| TseI | GCWGC | 2 cut(s) | 21, 139 |
| XapI | RAATTY | 1 cut(s) | 283 |
| XmnI | GAANNNNTTC | 1 cut(s) | 102 |
| XspI | CTAG | 1 cut(s) | 246 |