E3 ubiquitin-protein ligase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 8 |
| AccBSI | CCGCTC | 1 cut(s) | 272 |
| AciI | CCGC | 3 cut(s) | 12, 252, 270 |
| AclI | AACGTT | 1 cut(s) | 21 |
| AfaI | GTAC | 1 cut(s) | 290 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 96 |
| AgsI | TTSAA | 2 cut(s) | 146, 338 |
| AluBI | AGCT | 2 cut(s) | 116, 193 |
| AluI | AGCT | 2 cut(s) | 116, 193 |
| Alw26I | GTCTC | 1 cut(s) | 341 |
| Ama87I | CYCGRG | 1 cut(s) | 90 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 333 |
| AsuC2I | CCSGG | 2 cut(s) | 91, 92 |
| AsuHPI | GGTGA | 1 cut(s) | 83 |
| AvaI | CYCGRG | 1 cut(s) | 90 |
| BanI | GGYRCC | 1 cut(s) | 8 |
| BcnI | CCSGG | 2 cut(s) | 91, 92 |
| BcoDI | GTCTC | 1 cut(s) | 341 |
| BfaI | CTAG | 2 cut(s) | 122, 221 |
| BisI | GCNGC | 1 cut(s) | 12 |
| BlsI | GCNGC | 1 cut(s) | 13 |
| Bme1390I | CCNGG | 2 cut(s) | 91, 92 |
| BmeT110I | CYCGRG | 1 cut(s) | 90 |
| BmiI | GGNNCC | 1 cut(s) | 10 |
| BmrFI | CCNGG | 2 cut(s) | 91, 92 |
| BpuMI | CCSGG | 2 cut(s) | 91, 92 |
| BsaJI | CCNNGG | 1 cut(s) | 90 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 96 |
| BseDI | CCNNGG | 1 cut(s) | 90 |
| BseGI | GGATG | 1 cut(s) | 114 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BseMII | CTCAG | 1 cut(s) | 357 |
| BshNI | GGYRCC | 1 cut(s) | 8 |
| BsiHKCI | CYCGRG | 1 cut(s) | 90 |
| BsiSI | CCGG | 1 cut(s) | 91 |
| BslFI | GGGAC | 1 cut(s) | 234 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BsmAI | GTCTC | 1 cut(s) | 341 |
| BsmBI | CGTCTC | 1 cut(s) | 341 |
| BsmFI | GGGAC | 1 cut(s) | 234 |
| BsoBI | CYCGRG | 1 cut(s) | 90 |
| BspACI | CCGC | 3 cut(s) | 12, 252, 270 |
| BspCNI | CTCAG | 1 cut(s) | 356 |
| BspLI | GGNNCC | 1 cut(s) | 10 |
| BspT107I | GGYRCC | 1 cut(s) | 8 |
| BsrBI | CCGCTC | 1 cut(s) | 272 |
| BssECI | CCNNGG | 1 cut(s) | 90 |
| BstDEI | CTNAG | 1 cut(s) | 343 |
| BstF5I | GGATG | 1 cut(s) | 114 |
| BstMAI | GTCTC | 1 cut(s) | 341 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 32, 41, 251 |
| BstSCI | CCNGG | 2 cut(s) | 89, 90 |
| BtsCI | GGATG | 1 cut(s) | 114 |
| Cfr9I | CCCGGG | 1 cut(s) | 90 |
| Csp6I | GTAC | 1 cut(s) | 289 |
| CviJI | RGCY | 7 cut(s) | 5, 44, 116, 193, 314, 334, 341 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 44, 116, 193, 314, 334, 341 |
| CviQI | GTAC | 1 cut(s) | 289 |
| DdeI | CTNAG | 1 cut(s) | 343 |
| Eco88I | CYCGRG | 1 cut(s) | 90 |
| Esp3I | CGTCTC | 1 cut(s) | 341 |
| FaiI | YATR | 2 cut(s) | 280, 282 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 177, 209 |
| FaqI | GGGAC | 1 cut(s) | 234 |
| FauI | CCCGC | 1 cut(s) | 259 |
| Fnu4HI | GCNGC | 1 cut(s) | 12 |
| FokI | GGATG | 1 cut(s) | 121 |
| Fsp4HI | GCNGC | 1 cut(s) | 12 |
| FspBI | CTAG | 2 cut(s) | 122, 221 |
| GluI | GCNGC | 1 cut(s) | 12 |
| HapII | CCGG | 1 cut(s) | 91 |
| HincII | GTYRAC | 1 cut(s) | 81 |
| HindII | GTYRAC | 1 cut(s) | 81 |
| HinfI | GANTC | 1 cut(s) | 128 |
| HpaI | GTTAAC | 1 cut(s) | 81 |
| HpaII | CCGG | 1 cut(s) | 91 |
| HphI | GGTGA | 1 cut(s) | 83 |
| Hpy166II | GTNNAC | 1 cut(s) | 81 |
| Hpy188I | TCNGA | 2 cut(s) | 133, 346 |
| Hpy188III | TCNNGA | 2 cut(s) | 122, 221 |
| Hpy8I | GTNNAC | 1 cut(s) | 81 |
| Hpy99I | CGWCG | 1 cut(s) | 302 |
| HpyAV | CCTTC | 1 cut(s) | 172 |
| HpyCH4IV | ACGT | 1 cut(s) | 21 |
| HpyCH4V | TGCA | 3 cut(s) | 26, 208, 245 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 32, 41, 251 |
| HpyF3I | CTNAG | 1 cut(s) | 343 |
| HpySE526I | ACGT | 1 cut(s) | 21 |
| KspAI | GTTAAC | 1 cut(s) | 81 |
| LpnPI | CCDG | 8 cut(s) | 26, 54, 66, 104, 240, 246, 260, 338 |
| MaeI | CTAG | 2 cut(s) | 122, 221 |
| MaeII | ACGT | 1 cut(s) | 21 |
| MbiI | CCGCTC | 1 cut(s) | 272 |
| MboII | GAAGA | 3 cut(s) | 146, 158, 161 |
| MfeI | CAATTG | 1 cut(s) | 84 |
| MluCI | AATT | 3 cut(s) | 84, 161, 284 |
| MmeI | TCCRAC | 1 cut(s) | 81 |
| MnlI | CCTC | 5 cut(s) | 99, 118, 133, 297, 352 |
| MroXI | GAANNNNTTC | 1 cut(s) | 333 |
| MseI | TTAA | 4 cut(s) | 18, 29, 80, 198 |
| MspA1I | CMGCKG | 1 cut(s) | 254 |
| MspI | CCGG | 1 cut(s) | 91 |
| MspR9I | CCNGG | 2 cut(s) | 91, 92 |
| MunI | CAATTG | 1 cut(s) | 84 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 32, 41, 251 |
| NciI | CCSGG | 2 cut(s) | 91, 92 |
| NlaIV | GGNNCC | 1 cut(s) | 10 |
| PdmI | GAANNNNTTC | 1 cut(s) | 333 |
| PfeI | GAWTC | 1 cut(s) | 128 |
| PkrI | GCNGC | 1 cut(s) | 13 |
| Psp1406I | AACGTT | 1 cut(s) | 21 |
| PspN4I | GGNNCC | 1 cut(s) | 10 |
| RsaI | GTAC | 1 cut(s) | 290 |
| RsaNI | GTAC | 1 cut(s) | 289 |
| SaqAI | TTAA | 4 cut(s) | 18, 29, 80, 198 |
| SatI | GCNGC | 1 cut(s) | 12 |
| ScrFI | CCNGG | 2 cut(s) | 91, 92 |
| SetI | ASST | 7 cut(s) | 24, 55, 73, 118, 144, 183, 195 |
| SmaI | CCCGGG | 1 cut(s) | 92 |
| Sse9I | AATT | 3 cut(s) | 84, 161, 284 |
| SsiI | CCGC | 3 cut(s) | 12, 252, 270 |
| SspMI | CTAG | 2 cut(s) | 122, 221 |
| StyD4I | CCNGG | 2 cut(s) | 89, 90 |
| TaiI | ACGT | 1 cut(s) | 24 |
| TasI | AATT | 3 cut(s) | 84, 161, 284 |
| TauI | GCSGC | 1 cut(s) | 14 |
| TfiI | GAWTC | 1 cut(s) | 128 |
| Tru1I | TTAA | 4 cut(s) | 18, 29, 80, 198 |
| Tru9I | TTAA | 4 cut(s) | 18, 29, 80, 198 |
| TspDTI | ATGAA | 2 cut(s) | 125, 174 |
| TspGWI | ACGGA | 1 cut(s) | 314 |
| TspMI | CCCGGG | 1 cut(s) | 90 |
| XbaI | TCTAGA | 2 cut(s) | 121, 220 |
| XmaI | CCCGGG | 1 cut(s) | 90 |
| XmnI | GAANNNNTTC | 1 cut(s) | 333 |
| XspI | CTAG | 2 cut(s) | 122, 221 |